HEADER TRANSPORT PROTEIN 10-JAN-19 6QFJ TITLE MAMB CTD MAGNETOSOME PROTEIN [DESULFAMPLUS MAGNETOVALLIMORTIS BW-1] COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAGNETOSOME MEMBRANE PROTEIN MAMB, PUTATIVE CO/ZN/CD CATION COMPND 3 TRANSPORTER. CATION DIFFUSION FACILITATOR FAMILY; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFAMPLUS MAGNETOVALLIMORTIS; SOURCE 3 ORGANISM_TAXID: 1246637; SOURCE 4 GENE: MAMB-1, DEMABW1_80065, MTBBW1_80065; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS BACTERIAL ORGANELLE, BIOMINERALIZATION, CATION DIFFUSION KEYWDS 2 FACILITATORS, IRON TRANSPORT, MAGNETOSOME BIOGENESIS, MAGNETOTACTIC KEYWDS 3 BACTERIA, MEMBRANE INVAGINATION, STRUCTURE-FUNCTION ANALYSIS., KEYWDS 4 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.Z.ZEYTUNI,N.K.KEREN,R.Z.ZARIVACH REVDAT 4 01-MAY-24 6QFJ 1 REMARK REVDAT 3 19-AUG-20 6QFJ 1 JRNL REVDAT 2 02-OCT-19 6QFJ 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV SEQRES HELIX SHEET REVDAT 2 3 1 CRYST1 ATOM REVDAT 1 06-FEB-19 6QFJ 0 JRNL AUTH N.KEREN-KHADMY,N.ZEYTUNI,N.KUTNOWSKI,G.PERRIERE,C.MONTEIL, JRNL AUTH 2 R.ZARIVACH JRNL TITL FROM CONSERVATION TO STRUCTURE, STUDIES OF MAGNETOSOME JRNL TITL 2 ASSOCIATED CATION DIFFUSION FACILITATORS (CDF) PROTEINS IN JRNL TITL 3 PROTEOBACTERIA. JRNL REF PLOS ONE V. 15 31839 2020 JRNL REFN ESSN 1932-6203 JRNL PMID 32310978 JRNL DOI 10.1371/JOURNAL.PONE.0231839 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 31577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1683 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1949 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 156 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.12000 REMARK 3 B22 (A**2) : -1.66000 REMARK 3 B33 (A**2) : 3.20000 REMARK 3 B12 (A**2) : 0.82000 REMARK 3 B13 (A**2) : 0.65000 REMARK 3 B23 (A**2) : -0.73000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.229 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.511 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4029 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4083 ; 0.011 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5457 ; 1.838 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9448 ; 1.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 495 ; 6.041 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;40.599 ;25.968 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 808 ;19.016 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;17.200 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 671 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4404 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 750 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1977 ; 3.290 ; 3.721 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1976 ; 3.283 ; 3.721 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2464 ; 4.912 ; 5.557 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2465 ; 4.913 ; 5.557 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2052 ; 4.279 ; 4.304 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2052 ; 4.278 ; 4.304 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2990 ; 6.698 ; 6.229 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15856 ;10.304 ;35.772 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15732 ;10.291 ;35.742 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 15 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 188 269 B 188 269 5043 0.10 0.05 REMARK 3 2 A 188 269 C 188 269 4828 0.15 0.05 REMARK 3 3 A 190 269 D 190 269 4829 0.14 0.05 REMARK 3 4 A 190 269 E 190 269 4635 0.16 0.05 REMARK 3 5 A 190 269 F 190 269 4646 0.15 0.05 REMARK 3 6 B 188 270 C 188 270 4884 0.15 0.05 REMARK 3 7 B 190 269 D 190 269 4724 0.14 0.05 REMARK 3 8 B 190 269 E 190 269 4557 0.16 0.05 REMARK 3 9 B 190 269 F 190 269 4700 0.15 0.05 REMARK 3 10 C 190 269 D 190 269 4925 0.12 0.05 REMARK 3 11 C 190 269 E 190 269 4600 0.17 0.05 REMARK 3 12 C 190 269 F 190 269 4722 0.16 0.05 REMARK 3 13 D 190 270 E 190 270 4804 0.16 0.05 REMARK 3 14 D 190 270 F 190 270 4774 0.16 0.05 REMARK 3 15 E 190 270 F 190 270 4697 0.15 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 187 A 270 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5309 -0.7451 -15.0959 REMARK 3 T TENSOR REMARK 3 T11: 0.1087 T22: 0.0508 REMARK 3 T33: 0.1233 T12: -0.0197 REMARK 3 T13: 0.0149 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.2995 L22: 3.9831 REMARK 3 L33: 0.7928 L12: -2.1026 REMARK 3 L13: -0.6657 L23: 0.4950 REMARK 3 S TENSOR REMARK 3 S11: -0.1976 S12: -0.0331 S13: -0.2630 REMARK 3 S21: 0.4674 S22: 0.0357 S23: 0.3590 REMARK 3 S31: 0.1618 S32: -0.0148 S33: 0.1619 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 188 B 270 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6695 14.9394 -25.4853 REMARK 3 T TENSOR REMARK 3 T11: 0.0353 T22: 0.0956 REMARK 3 T33: 0.1387 T12: -0.0082 REMARK 3 T13: 0.0067 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 3.5838 L22: 3.5260 REMARK 3 L33: 0.8826 L12: -1.4139 REMARK 3 L13: 0.6552 L23: -0.7566 REMARK 3 S TENSOR REMARK 3 S11: 0.0522 S12: 0.5040 S13: 0.4270 REMARK 3 S21: -0.0730 S22: -0.1760 S23: -0.2649 REMARK 3 S31: 0.0016 S32: 0.1714 S33: 0.1238 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 188 C 270 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5457 -3.7540 -1.2754 REMARK 3 T TENSOR REMARK 3 T11: 0.1607 T22: 0.2735 REMARK 3 T33: 0.1710 T12: 0.0317 REMARK 3 T13: -0.0365 T23: 0.1170 REMARK 3 L TENSOR REMARK 3 L11: 1.6084 L22: 3.5988 REMARK 3 L33: 3.7158 L12: 0.5178 REMARK 3 L13: -1.8521 L23: -1.8064 REMARK 3 S TENSOR REMARK 3 S11: -0.1497 S12: -0.6031 S13: -0.3266 REMARK 3 S21: 0.5057 S22: -0.2212 S23: -0.2390 REMARK 3 S31: 0.1202 S32: 0.6321 S33: 0.3709 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 190 D 290 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3011 -8.2581 -38.9845 REMARK 3 T TENSOR REMARK 3 T11: 0.2652 T22: 0.1681 REMARK 3 T33: 0.1193 T12: 0.0334 REMARK 3 T13: 0.0905 T23: -0.0504 REMARK 3 L TENSOR REMARK 3 L11: 3.7640 L22: 0.7523 REMARK 3 L33: 3.3335 L12: 0.3032 REMARK 3 L13: -1.8122 L23: -1.1993 REMARK 3 S TENSOR REMARK 3 S11: -0.1597 S12: 0.4850 S13: -0.2699 REMARK 3 S21: -0.4030 S22: -0.1339 S23: -0.1622 REMARK 3 S31: 0.4810 S32: 0.1087 S33: 0.2936 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 190 E 270 REMARK 3 ORIGIN FOR THE GROUP (A): -20.3962 -20.8192 -45.0656 REMARK 3 T TENSOR REMARK 3 T11: 0.2850 T22: 0.4404 REMARK 3 T33: 0.3646 T12: 0.0784 REMARK 3 T13: -0.0569 T23: -0.2670 REMARK 3 L TENSOR REMARK 3 L11: 8.9322 L22: 1.8570 REMARK 3 L33: 1.8773 L12: 0.0007 REMARK 3 L13: 2.0743 L23: -0.6643 REMARK 3 S TENSOR REMARK 3 S11: 0.3787 S12: 1.4945 S13: -1.2269 REMARK 3 S21: -0.4720 S22: -0.0503 S23: -0.0191 REMARK 3 S31: -0.1067 S32: 0.1803 S33: -0.3284 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 190 F 270 REMARK 3 ORIGIN FOR THE GROUP (A): -22.1252 20.1030 3.9579 REMARK 3 T TENSOR REMARK 3 T11: 0.3318 T22: 0.1630 REMARK 3 T33: 0.1054 T12: 0.1059 REMARK 3 T13: -0.0838 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.9830 L22: 5.4161 REMARK 3 L33: 2.9191 L12: -0.1233 REMARK 3 L13: -0.5963 L23: 0.8592 REMARK 3 S TENSOR REMARK 3 S11: -0.1739 S12: -0.3419 S13: -0.0507 REMARK 3 S21: 0.9913 S22: 0.4473 S23: -0.3685 REMARK 3 S31: -0.1880 S32: -0.0231 S33: -0.2734 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QFJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100097. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.932 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3384 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 23.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: MAMM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3,350 0.1M TRIS PH 8.6 0.2M REMARK 280 AMMONIUM ACETATE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 187 REMARK 465 SER C 187 REMARK 465 SER D 187 REMARK 465 HIS D 188 REMARK 465 MET D 189 REMARK 465 SER E 187 REMARK 465 HIS E 188 REMARK 465 MET E 189 REMARK 465 SER F 187 REMARK 465 HIS F 188 REMARK 465 MET F 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU E 216 NH2 ARG E 255 1.69 REMARK 500 OE1 GLU A 201 O HOH A 301 2.09 REMARK 500 O GLN C 219 NH2 ARG C 255 2.11 REMARK 500 O GLN E 267 O HOH E 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU E 239 CD GLU E 239 OE1 0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 240 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG D 240 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP E 211 CB - CG - OD1 ANGL. DEV. = -6.8 DEGREES REMARK 500 ASP E 211 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP F 232 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP F 254 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU D 190 ASP D 191 148.58 REMARK 500 REMARK 500 REMARK: NULL DBREF 6QFJ A 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 DBREF 6QFJ B 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 DBREF 6QFJ C 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 DBREF 6QFJ D 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 DBREF 6QFJ E 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 DBREF 6QFJ F 190 270 UNP L0R6P9 L0R6P9_9DELT 213 293 SEQADV 6QFJ SER A 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS A 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET A 189 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ SER B 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS B 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET B 189 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ SER C 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS C 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET C 189 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ SER D 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS D 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET D 189 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ SER E 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS E 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET E 189 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ SER F 187 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ HIS F 188 UNP L0R6P9 EXPRESSION TAG SEQADV 6QFJ MET F 189 UNP L0R6P9 EXPRESSION TAG SEQRES 1 A 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 A 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 A 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 A 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 A 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 A 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 A 84 ALA ALA GLN GLU GLU LEU SEQRES 1 B 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 B 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 B 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 B 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 B 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 B 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 B 84 ALA ALA GLN GLU GLU LEU SEQRES 1 C 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 C 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 C 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 C 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 C 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 C 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 C 84 ALA ALA GLN GLU GLU LEU SEQRES 1 D 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 D 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 D 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 D 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 D 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 D 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 D 84 ALA ALA GLN GLU GLU LEU SEQRES 1 E 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 E 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 E 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 E 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 E 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 E 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 E 84 ALA ALA GLN GLU GLU LEU SEQRES 1 F 84 SER HIS MET GLU ASP TYR ILE GLU ALA ILE ALA ASN VAL SEQRES 2 F 84 LEU GLU LYS THR PRO SER ILE SER ASP VAL LYS ASP ILE SEQRES 3 F 84 ILE ALA ARG GLU LEU GLY GLN VAL LEU GLU PHE GLU ILE SEQRES 4 F 84 ASP LEU TYR VAL PRO PRO ASP ILE THR VAL THR THR GLY SEQRES 5 F 84 GLU ARG ILE LYS LYS GLU VAL ASN GLN ILE ILE LYS GLU SEQRES 6 F 84 ILE VAL ASP ARG LYS SER THR VAL LYS VAL ARG LEU PHE SEQRES 7 F 84 ALA ALA GLN GLU GLU LEU FORMUL 7 HOH *156(H2 O) HELIX 1 AA1 SER A 187 LYS A 202 1 16 HELIX 2 AA2 THR A 234 VAL A 253 1 20 HELIX 3 AA3 MET B 189 LYS B 202 1 14 HELIX 4 AA4 THR B 234 VAL B 253 1 20 HELIX 5 AA5 MET C 189 LYS C 202 1 14 HELIX 6 AA6 THR C 234 VAL C 253 1 20 HELIX 7 AA7 ASP D 191 LYS D 202 1 12 HELIX 8 AA8 THR D 234 VAL D 253 1 20 HELIX 9 AA9 ASP E 191 LYS E 202 1 12 HELIX 10 AB1 THR E 234 VAL E 253 1 20 HELIX 11 AB2 ASP F 191 LYS F 202 1 12 HELIX 12 AB3 THR F 234 VAL F 253 1 20 SHEET 1 AA1 3 ASP A 208 LEU A 217 0 SHEET 2 AA1 3 VAL A 220 VAL A 229 -1 O GLU A 222 N ARG A 215 SHEET 3 AA1 3 SER A 257 ALA A 265 1 O LYS A 260 N ILE A 225 SHEET 1 AA2 3 ASP B 208 LEU B 217 0 SHEET 2 AA2 3 VAL B 220 VAL B 229 -1 O VAL B 220 N LEU B 217 SHEET 3 AA2 3 SER B 257 ALA B 265 1 O LYS B 260 N ILE B 225 SHEET 1 AA3 3 ASP C 208 LEU C 217 0 SHEET 2 AA3 3 VAL C 220 VAL C 229 -1 O ASP C 226 N ASP C 211 SHEET 3 AA3 3 SER C 257 ALA C 265 1 O LYS C 260 N ILE C 225 SHEET 1 AA4 3 ASP D 208 LEU D 217 0 SHEET 2 AA4 3 VAL D 220 VAL D 229 -1 O GLU D 222 N ARG D 215 SHEET 3 AA4 3 SER D 257 ALA D 265 1 O LYS D 260 N ILE D 225 SHEET 1 AA5 3 ASP E 208 GLU E 216 0 SHEET 2 AA5 3 LEU E 221 VAL E 229 -1 O ASP E 226 N ASP E 211 SHEET 3 AA5 3 SER E 257 ALA E 265 1 O LYS E 260 N ILE E 225 SHEET 1 AA6 3 ASP F 208 LEU F 217 0 SHEET 2 AA6 3 VAL F 220 VAL F 229 -1 O VAL F 220 N LEU F 217 SHEET 3 AA6 3 SER F 257 ALA F 265 1 O THR F 258 N PHE F 223 CISPEP 1 GLY E 218 GLN E 219 0 3.03 CRYST1 46.973 47.070 74.626 74.19 84.86 84.21 P 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021289 -0.002159 -0.001392 0.00000 SCALE2 0.000000 0.021354 -0.005888 0.00000 SCALE3 0.000000 0.000000 0.013956 0.00000