HEADER VIRAL PROTEIN 11-JAN-19 6QGI TITLE CRYSTAL STRUCTURE OF VP5 FROM HALOARCHAEAL PLEOMORPHIC VIRUS 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORUBRUM PLEOMORPHIC VIRUS 2; SOURCE 3 ORGANISM_TAXID: 1156719; SOURCE 4 EXPRESSION_SYSTEM: HALORUBRUM PLEOMORPHIC VIRUS 2; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1156719 KEYWDS PROKARYOTIC, VIRAL, MEMBRANE FUSION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.EL OMARI,T.S.WALTER,K.HARLOS,J.M.GRIMES,D.I.STUART,E.ROINE REVDAT 3 01-MAY-24 6QGI 1 HETSYN REVDAT 2 29-JUL-20 6QGI 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 27-FEB-19 6QGI 0 JRNL AUTH K.EL OMARI,S.LI,A.KOTECHA,T.S.WALTER,E.A.BIGNON,K.HARLOS, JRNL AUTH 2 P.SOMERHARJU,F.DE HAAS,D.K.CLARE,M.MOLIN,F.HURTADO,M.LI, JRNL AUTH 3 J.M.GRIMES,D.H.BAMFORD,N.D.TISCHLER,J.T.HUISKONEN, JRNL AUTH 4 D.I.STUART,E.ROINE JRNL TITL THE STRUCTURE OF A PROKARYOTIC VIRAL ENVELOPE PROTEIN JRNL TITL 2 EXPANDS THE LANDSCAPE OF MEMBRANE FUSION PROTEINS. JRNL REF NAT COMMUN V. 10 846 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30783086 JRNL DOI 10.1038/S41467-019-08728-7 REMARK 2 REMARK 2 RESOLUTION. 2.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.2 REMARK 3 NUMBER OF REFLECTIONS : 16729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 841 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 42 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 34.72 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 399 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2812 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 374 REMARK 3 BIN R VALUE (WORKING SET) : 0.2817 REMARK 3 BIN FREE R VALUE : 0.2736 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.27 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3740 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.33390 REMARK 3 B22 (A**2) : 11.42160 REMARK 3 B33 (A**2) : -9.08770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.390 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 1.162 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.302 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.977 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.304 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.891 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3818 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5222 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1734 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 675 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3818 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 539 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4535 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.99 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.37 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -9.8727 3.6974 -7.3941 REMARK 3 T TENSOR REMARK 3 T11: -0.1394 T22: -0.1549 REMARK 3 T33: 0.0643 T12: -0.0073 REMARK 3 T13: -0.0107 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 0.9818 L22: 1.7387 REMARK 3 L33: 0.3204 L12: -0.1304 REMARK 3 L13: -0.1043 L23: -0.4201 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0816 S13: 0.0228 REMARK 3 S21: -0.1052 S22: 0.0562 S23: -0.0025 REMARK 3 S31: 0.1427 S32: 0.0172 S33: -0.0383 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QGI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100125. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16761 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.460 REMARK 200 RESOLUTION RANGE LOW (A) : 46.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 36.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HRPV6 VP5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (W/V) PEG 4000, 0.1 M NA-HEPES PH REMARK 280 7.5 AND 0.1 M NACL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.04000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.91000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.61000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.91000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.04000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.61000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 499 REMARK 465 GLY A 500 REMARK 465 GLY A 501 REMARK 465 LEU A 502 REMARK 465 ASP A 503 REMARK 465 LEU A 504 REMARK 465 GLY A 505 REMARK 465 GLN A 506 REMARK 465 PHE A 507 REMARK 465 ASP A 508 REMARK 465 MET A 509 REMARK 465 PHE A 510 REMARK 465 GLY A 511 REMARK 465 ILE A 512 REMARK 465 PRO A 513 REMARK 465 GLY A 514 REMARK 465 GLU A 515 REMARK 465 ILE A 516 REMARK 465 VAL A 517 REMARK 465 ALA A 518 REMARK 465 VAL A 519 REMARK 465 GLY A 520 REMARK 465 VAL A 521 REMARK 465 ALA A 522 REMARK 465 ALA A 523 REMARK 465 LEU A 524 REMARK 465 VAL A 525 REMARK 465 GLY A 526 REMARK 465 LEU A 527 REMARK 465 GLY A 528 REMARK 465 VAL A 529 REMARK 465 LEU A 530 REMARK 465 GLY A 531 REMARK 465 ASN A 532 REMARK 465 ASN A 533 DBREF 6QGI A 1 533 UNP H9ABL9 H9ABL9_9VIRU 33 565 SEQADV 6QGI ASP A 218 UNP H9ABL9 ASN 250 CONFLICT SEQRES 1 A 533 ILE ALA PRO LEU VAL GLY VAL GLY LEU ALA ALA GLY ALA SEQRES 2 A 533 VAL GLY VAL GLY TRP ALA LEU ARG GLU PHE GLU ILE VAL SEQRES 3 A 533 GLY SER ASP ALA PRO PRO GLU GLY LEU THR ALA ASP ALA SEQRES 4 A 533 LEU LYS GLN GLN VAL TYR GLN THR ALA LYS THR ARG LYS SEQRES 5 A 533 SER THR ASN ALA SER THR ILE VAL ASP ASN GLN ASN ILE SEQRES 6 A 533 LEU ASP GLY VAL LYS HIS THR ALA TYR THR ASP ALA LYS SEQRES 7 A 533 ILE ALA ALA ILE GLU GLU LEU ASN ALA GLY SER ALA GLU SEQRES 8 A 533 SER ALA VAL LEU ASP ALA ALA THR THR GLU VAL ASN SER SEQRES 9 A 533 TYR LEU THR THR VAL GLN SER ASN PHE LEU LYS THR TRP SEQRES 10 A 533 ASN GLU SER VAL ALA GLU LEU ASP SER ILE LEU SER THR SEQRES 11 A 533 VAL VAL ASN HIS PRO ASP ILE GLY LYS GLY ASP VAL PHE SEQRES 12 A 533 LEU MET LEU ASN GLY SER ASP ASN THR ILE GLU ASP LEU SEQRES 13 A 533 LEU ALA ASN PRO SER GLY SER THR ASP ALA THR SER PHE SEQRES 14 A 533 THR LEU ALA ASP GLY THR THR MET SER VAL GLY THR VAL SEQRES 15 A 533 GLU VAL ASP ARG GLY THR GLU SER TYR TYR TYR ASP PRO SEQRES 16 A 533 MET SER GLY LEU VAL GLY ASP LEU GLY ASP LEU LYS ASN SEQRES 17 A 533 GLY GLY PRO THR VAL GLN TYR ASP GLY ASP SER LEU VAL SEQRES 18 A 533 TYR LEU ASN ALA SER ASN TRP LYS PRO ILE TYR ASP GLU SEQRES 19 A 533 MET ASP THR VAL LEU GLN ASN VAL ARG SER GLY ILE SER SEQRES 20 A 533 THR TRP VAL SER ASN VAL TYR GLY ASP VAL GLN SER GLY SEQRES 21 A 533 GLU ILE GLU VAL SER ASP LEU VAL THR PRO ARG GLU ARG SEQRES 22 A 533 ALA ALA MET MET ALA GLN GLU GLU GLY MET SER GLN ALA SEQRES 23 A 533 ILE ALA ASP LEU ILE ALA LEU ASN VAL PRO VAL ASP ALA SEQRES 24 A 533 GLU ARG GLU ALA THR ILE THR ILE GLN ASP THR GLY ALA SEQRES 25 A 533 THR LEU PRO GLY THR PHE ALA LEU THR ASP ALA SER ASP SEQRES 26 A 533 GLY PRO LEU GLU SER GLY LYS THR TYR ASP PRO SER THR SEQRES 27 A 533 PHE SER GLY ASP VAL TYR PHE THR ALA ASP MET SER LEU SEQRES 28 A 533 VAL GLU GLY ASP TRP THR ALA TYR GLN SER GLY VAL ASP SEQRES 29 A 533 GLY GLY ASN VAL THR LEU THR SER GLU PRO TYR SER GLY SEQRES 30 A 533 THR ALA VAL GLU LEU ASN THR ALA ALA ASN GLU THR VAL SEQRES 31 A 533 ALA VAL ASP ALA GLY ASN TRP THR ALA THR GLY ASN GLY SEQRES 32 A 533 THR TRP TYR HIS ASP VAL SER PRO GLU LEU GLU THR ASP SEQRES 33 A 533 ILE THR SER ILE GLU SER ALA ARG PHE LEU SER THR ALA SEQRES 34 A 533 GLU GLN THR GLN TYR GLU THR ILE GLN LEU GLN GLY SER SEQRES 35 A 533 PHE THR ILE ASP LYS LEU THR ASN THR GLN THR GLY GLU SEQRES 36 A 533 GLU VAL THR ALA THR SER PHE ASP SER SER GLU PRO HIS SEQRES 37 A 533 THR ASP SER ASN TYR ILE THR GLN GLU GLU TRP ASP GLN SEQRES 38 A 533 LEU GLU GLN GLN ASN LYS GLU LEU ILE GLU LYS TYR GLU SEQRES 39 A 533 GLN SER GLN SER GLY GLY GLY LEU ASP LEU GLY GLN PHE SEQRES 40 A 533 ASP MET PHE GLY ILE PRO GLY GLU ILE VAL ALA VAL GLY SEQRES 41 A 533 VAL ALA ALA LEU VAL GLY LEU GLY VAL LEU GLY ASN ASN HET NAG A 601 14 HET CL A 602 1 HET CL A 603 1 HET CL A 604 1 HET CL A 605 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 CL 4(CL 1-) FORMUL 7 HOH *75(H2 O) HELIX 1 AA1 VAL A 16 LEU A 20 5 5 HELIX 2 AA2 THR A 36 ILE A 59 1 24 HELIX 3 AA3 ILE A 65 ALA A 87 1 23 HELIX 4 AA4 ALA A 90 HIS A 134 1 45 HELIX 5 AA5 GLY A 138 VAL A 142 5 5 HELIX 6 AA6 ASN A 224 TYR A 254 1 31 HELIX 7 AA7 THR A 269 GLU A 280 1 12 HELIX 8 AA8 SER A 284 LEU A 293 1 10 HELIX 9 AA9 ASP A 335 PHE A 339 5 5 HELIX 10 AB1 GLY A 395 TRP A 397 5 3 HELIX 11 AB2 THR A 475 GLN A 497 1 23 SHEET 1 AA1 7 ALA A 11 ALA A 13 0 SHEET 2 AA1 7 TYR A 434 LEU A 439 -1 O GLN A 438 N GLY A 12 SHEET 3 AA1 7 VAL A 343 ASP A 348 -1 N ALA A 347 O GLU A 435 SHEET 4 AA1 7 THR A 313 LEU A 320 -1 N ALA A 319 O TYR A 344 SHEET 5 AA1 7 VAL A 297 ILE A 307 -1 N ALA A 303 O GLY A 316 SHEET 6 AA1 7 PHE A 443 ASN A 450 -1 O THR A 449 N GLU A 302 SHEET 7 AA1 7 THR A 333 TYR A 334 -1 N TYR A 334 O PHE A 443 SHEET 1 AA2 3 ASP A 155 ASN A 159 0 SHEET 2 AA2 3 THR A 181 ARG A 186 -1 O GLU A 183 N LEU A 157 SHEET 3 AA2 3 GLU A 189 TYR A 193 -1 O TYR A 191 N VAL A 184 SHEET 1 AA3 2 THR A 167 THR A 170 0 SHEET 2 AA3 2 THR A 176 VAL A 179 -1 O MET A 177 N PHE A 169 SHEET 1 AA4 2 THR A 212 TYR A 215 0 SHEET 2 AA4 2 ASP A 218 VAL A 221 -1 O ASP A 218 N TYR A 215 SHEET 1 AA5 3 GLU A 353 ASP A 355 0 SHEET 2 AA5 3 THR A 418 SER A 427 -1 O PHE A 425 N GLY A 354 SHEET 3 AA5 3 GLY A 362 VAL A 363 -1 N VAL A 363 O THR A 418 SHEET 1 AA6 4 GLU A 353 ASP A 355 0 SHEET 2 AA6 4 THR A 418 SER A 427 -1 O PHE A 425 N GLY A 354 SHEET 3 AA6 4 THR A 378 THR A 384 -1 N GLU A 381 O ARG A 424 SHEET 4 AA6 4 THR A 389 ASP A 393 -1 O VAL A 390 N LEU A 382 SHEET 1 AA7 3 ASN A 367 LEU A 370 0 SHEET 2 AA7 3 TRP A 405 ASP A 408 -1 O TRP A 405 N LEU A 370 SHEET 3 AA7 3 THR A 398 ALA A 399 -1 N THR A 398 O TYR A 406 LINK ND2 ASN A 396 C1 NAG A 601 1555 1555 1.44 CISPEP 1 GLY A 326 PRO A 327 0 1.28 CRYST1 48.080 93.220 121.820 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020799 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008209 0.00000