HEADER MEMBRANE PROTEIN 14-JAN-19 6QGY TITLE CRYSTAL STRUCTURE OF E.COLI BAMA BETA-BARREL IN COMPLEX WITH NANOBODY TITLE 2 B12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOB12; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: BAMA, YAET, Z0188, ECS0179; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15A; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA-BARREL, OUTER MEMBRANE, PROTEIN INSERTION, PROTEIN FOLDING, KEYWDS 2 PROTEIN MATURATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.-B.HARTMANN,H.KAUR,R.P.JAKOB,M.ZAHN,I.ZIMMERMANN,M.SEEGER,T.MAIER, AUTHOR 2 S.HILLER REVDAT 3 24-JAN-24 6QGY 1 REMARK REVDAT 2 21-AUG-19 6QGY 1 JRNL REVDAT 1 26-JUN-19 6QGY 0 JRNL AUTH H.KAUR,J.B.HARTMANN,R.P.JAKOB,M.ZAHN,I.ZIMMERMANN,T.MAIER, JRNL AUTH 2 M.A.SEEGER,S.HILLER JRNL TITL IDENTIFICATION OF CONFORMATION-SELECTIVE NANOBODIES AGAINST JRNL TITL 2 THE MEMBRANE PROTEIN INSERTASE BAMA BY AN INTEGRATED JRNL TITL 3 STRUCTURAL BIOLOGY APPROACH. JRNL REF J.BIOMOL.NMR V. 73 375 2019 JRNL REFN ISSN 0925-2738 JRNL PMID 31073665 JRNL DOI 10.1007/S10858-019-00250-8 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 69491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 3566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4927 - 7.3272 1.00 2800 128 0.2303 0.2549 REMARK 3 2 7.3272 - 5.8190 0.97 2646 146 0.2147 0.2115 REMARK 3 3 5.8190 - 5.0843 0.99 2666 150 0.1966 0.2128 REMARK 3 4 5.0843 - 4.6198 1.00 2696 154 0.1740 0.1861 REMARK 3 5 4.6198 - 4.2889 0.99 2676 141 0.1668 0.1938 REMARK 3 6 4.2889 - 4.0362 0.99 2670 156 0.1907 0.2124 REMARK 3 7 4.0362 - 3.8341 0.99 2674 134 0.2017 0.2300 REMARK 3 8 3.8341 - 3.6673 0.99 2639 161 0.2074 0.2348 REMARK 3 9 3.6673 - 3.5262 0.96 2550 146 0.2198 0.2532 REMARK 3 10 3.5262 - 3.4045 0.99 2651 133 0.2334 0.2511 REMARK 3 11 3.4045 - 3.2981 0.99 2659 139 0.2409 0.2449 REMARK 3 12 3.2981 - 3.2038 0.99 2624 127 0.2404 0.2690 REMARK 3 13 3.2038 - 3.1195 1.00 2688 144 0.2576 0.2865 REMARK 3 14 3.1195 - 3.0434 0.99 2677 145 0.2935 0.3558 REMARK 3 15 3.0434 - 2.9742 0.99 2606 157 0.3026 0.3166 REMARK 3 16 2.9742 - 2.9110 1.00 2659 155 0.2843 0.3124 REMARK 3 17 2.9110 - 2.8527 0.99 2650 134 0.2809 0.3117 REMARK 3 18 2.8527 - 2.7989 1.00 2675 141 0.2761 0.3143 REMARK 3 19 2.7989 - 2.7489 1.00 2645 160 0.2715 0.3101 REMARK 3 20 2.7489 - 2.7023 1.00 2637 124 0.2779 0.3668 REMARK 3 21 2.7023 - 2.6587 1.00 2716 147 0.2887 0.3118 REMARK 3 22 2.6587 - 2.6178 1.00 2599 159 0.2849 0.3197 REMARK 3 23 2.6178 - 2.5793 1.00 2677 145 0.3056 0.3552 REMARK 3 24 2.5793 - 2.5430 1.00 2637 121 0.3290 0.3626 REMARK 3 25 2.5430 - 2.5086 0.78 2108 119 0.3450 0.3847 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8050 REMARK 3 ANGLE : 0.591 10899 REMARK 3 CHIRALITY : 0.046 1089 REMARK 3 PLANARITY : 0.003 1418 REMARK 3 DIHEDRAL : 14.792 4597 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100070. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69491 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.509 REMARK 200 RESOLUTION RANGE LOW (A) : 48.484 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.97300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4N75 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 400, 0.2 M AMMONIUM PHOSPHATE, REMARK 280 0.1 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE PH 4.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 207 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 400 REMARK 465 GLY A 401 REMARK 465 SER A 402 REMARK 465 SER A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 SER A 410 REMARK 465 SER A 411 REMARK 465 GLY A 412 REMARK 465 GLU A 413 REMARK 465 ASN A 414 REMARK 465 LEU A 415 REMARK 465 TYR A 416 REMARK 465 PHE A 417 REMARK 465 GLN A 418 REMARK 465 HIS A 419 REMARK 465 MET A 420 REMARK 465 ARG A 421 REMARK 465 ASN A 422 REMARK 465 THR A 423 REMARK 465 GLY A 424 REMARK 465 SER A 425 REMARK 465 TYR A 682 REMARK 465 ASP A 683 REMARK 465 PRO A 684 REMARK 465 ASP A 685 REMARK 465 TYR A 686 REMARK 465 ASP A 687 REMARK 465 TYR A 688 REMARK 465 GLU A 689 REMARK 465 SER A 690 REMARK 465 ALA A 691 REMARK 465 THR A 692 REMARK 465 GLN A 693 REMARK 465 ASP A 694 REMARK 465 GLY A 695 REMARK 465 ALA A 696 REMARK 465 LYS A 697 REMARK 465 SER B 1 REMARK 465 GLN B 2 REMARK 465 GLY B 3 REMARK 465 MET C 400 REMARK 465 GLY C 401 REMARK 465 SER C 402 REMARK 465 SER C 403 REMARK 465 HIS C 404 REMARK 465 HIS C 405 REMARK 465 HIS C 406 REMARK 465 HIS C 407 REMARK 465 HIS C 408 REMARK 465 HIS C 409 REMARK 465 SER C 410 REMARK 465 SER C 411 REMARK 465 GLY C 412 REMARK 465 GLU C 413 REMARK 465 ASN C 414 REMARK 465 LEU C 415 REMARK 465 TYR C 416 REMARK 465 PHE C 417 REMARK 465 GLN C 418 REMARK 465 HIS C 419 REMARK 465 MET C 420 REMARK 465 ARG C 421 REMARK 465 ASN C 422 REMARK 465 THR C 423 REMARK 465 GLY C 424 REMARK 465 SER C 425 REMARK 465 TYR C 682 REMARK 465 ASP C 683 REMARK 465 PRO C 684 REMARK 465 ASP C 685 REMARK 465 TYR C 686 REMARK 465 ASP C 687 REMARK 465 TYR C 688 REMARK 465 GLU C 689 REMARK 465 SER C 690 REMARK 465 ALA C 691 REMARK 465 THR C 692 REMARK 465 GLN C 693 REMARK 465 ASP C 694 REMARK 465 GLY C 695 REMARK 465 ALA C 696 REMARK 465 SER D 1 REMARK 465 GLN D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG C 488 OD2 ASP C 512 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 475 104.55 -160.60 REMARK 500 THR A 659 -82.09 -122.26 REMARK 500 SER A 680 90.28 -64.52 REMARK 500 ILE A 725 64.09 -117.02 REMARK 500 ASP A 727 -154.56 -90.50 REMARK 500 GLU A 800 81.35 -152.52 REMARK 500 ASN C 475 102.98 -160.34 REMARK 500 LEU C 641 -61.67 -123.70 REMARK 500 THR C 659 -83.40 -121.34 REMARK 500 PHE C 724 31.68 70.48 REMARK 500 ASP C 727 -149.37 57.93 REMARK 500 LYS C 728 -124.24 87.31 REMARK 500 TYR C 729 42.81 -75.30 REMARK 500 GLU C 800 84.08 -150.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 901 REMARK 610 C8E A 902 REMARK 610 C8E A 903 REMARK 610 C8E A 904 REMARK 610 C8E A 905 REMARK 610 C8E C 901 REMARK 610 C8E C 902 REMARK 610 C8E C 903 REMARK 610 C8E C 904 REMARK 610 C8E C 905 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E C 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E C 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E C 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E C 905 DBREF 6QGY A 421 810 UNP P0A942 BAMA_ECO57 421 810 DBREF 6QGY B 1 124 PDB 6QGY 6QGY 1 124 DBREF 6QGY C 421 810 UNP P0A942 BAMA_ECO57 421 810 DBREF 6QGY D 1 124 PDB 6QGY 6QGY 1 124 SEQADV 6QGY MET A 400 UNP P0A942 INITIATING METHIONINE SEQADV 6QGY GLY A 401 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER A 402 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER A 403 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 404 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 405 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 406 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 407 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 408 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 409 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER A 410 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER A 411 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLY A 412 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLU A 413 UNP P0A942 EXPRESSION TAG SEQADV 6QGY ASN A 414 UNP P0A942 EXPRESSION TAG SEQADV 6QGY LEU A 415 UNP P0A942 EXPRESSION TAG SEQADV 6QGY TYR A 416 UNP P0A942 EXPRESSION TAG SEQADV 6QGY PHE A 417 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLN A 418 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS A 419 UNP P0A942 EXPRESSION TAG SEQADV 6QGY MET A 420 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER A 690 UNP P0A942 CYS 690 ENGINEERED MUTATION SEQADV 6QGY SER A 700 UNP P0A942 CYS 700 ENGINEERED MUTATION SEQADV 6QGY MET C 400 UNP P0A942 INITIATING METHIONINE SEQADV 6QGY GLY C 401 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER C 402 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER C 403 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 404 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 405 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 406 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 407 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 408 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 409 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER C 410 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER C 411 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLY C 412 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLU C 413 UNP P0A942 EXPRESSION TAG SEQADV 6QGY ASN C 414 UNP P0A942 EXPRESSION TAG SEQADV 6QGY LEU C 415 UNP P0A942 EXPRESSION TAG SEQADV 6QGY TYR C 416 UNP P0A942 EXPRESSION TAG SEQADV 6QGY PHE C 417 UNP P0A942 EXPRESSION TAG SEQADV 6QGY GLN C 418 UNP P0A942 EXPRESSION TAG SEQADV 6QGY HIS C 419 UNP P0A942 EXPRESSION TAG SEQADV 6QGY MET C 420 UNP P0A942 EXPRESSION TAG SEQADV 6QGY SER C 690 UNP P0A942 CYS 690 ENGINEERED MUTATION SEQADV 6QGY SER C 700 UNP P0A942 CYS 700 ENGINEERED MUTATION SEQRES 1 A 411 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 411 GLU ASN LEU TYR PHE GLN HIS MET ARG ASN THR GLY SER SEQRES 3 A 411 PHE ASN PHE GLY ILE GLY TYR GLY THR GLU SER GLY VAL SEQRES 4 A 411 SER PHE GLN ALA GLY VAL GLN GLN ASP ASN TRP LEU GLY SEQRES 5 A 411 THR GLY TYR ALA VAL GLY ILE ASN GLY THR LYS ASN ASP SEQRES 6 A 411 TYR GLN THR TYR ALA GLU LEU SER VAL THR ASN PRO TYR SEQRES 7 A 411 PHE THR VAL ASP GLY VAL SER LEU GLY GLY ARG LEU PHE SEQRES 8 A 411 TYR ASN ASP PHE GLN ALA ASP ASP ALA ASP LEU SER ASP SEQRES 9 A 411 TYR THR ASN LYS SER TYR GLY THR ASP VAL THR LEU GLY SEQRES 10 A 411 PHE PRO ILE ASN GLU TYR ASN SER LEU ARG ALA GLY LEU SEQRES 11 A 411 GLY TYR VAL HIS ASN SER LEU SER ASN MET GLN PRO GLN SEQRES 12 A 411 VAL ALA MET TRP ARG TYR LEU TYR SER MET GLY GLU HIS SEQRES 13 A 411 PRO SER THR SER ASP GLN ASP ASN SER PHE LYS THR ASP SEQRES 14 A 411 ASP PHE THR PHE ASN TYR GLY TRP THR TYR ASN LYS LEU SEQRES 15 A 411 ASP ARG GLY TYR PHE PRO THR ASP GLY SER ARG VAL ASN SEQRES 16 A 411 LEU THR GLY LYS VAL THR ILE PRO GLY SER ASP ASN GLU SEQRES 17 A 411 TYR TYR LYS VAL THR LEU ASP THR ALA THR TYR VAL PRO SEQRES 18 A 411 ILE ASP ASP ASP HIS LYS TRP VAL VAL LEU GLY ARG THR SEQRES 19 A 411 ARG TRP GLY TYR GLY ASP GLY LEU GLY GLY LYS GLU MET SEQRES 20 A 411 PRO PHE TYR GLU ASN PHE TYR ALA GLY GLY SER SER THR SEQRES 21 A 411 VAL ARG GLY PHE GLN SER ASN THR ILE GLY PRO LYS ALA SEQRES 22 A 411 VAL TYR PHE PRO HIS GLN ALA SER ASN TYR ASP PRO ASP SEQRES 23 A 411 TYR ASP TYR GLU SER ALA THR GLN ASP GLY ALA LYS ASP SEQRES 24 A 411 LEU SER LYS SER ASP ASP ALA VAL GLY GLY ASN ALA MET SEQRES 25 A 411 ALA VAL ALA SER LEU GLU PHE ILE THR PRO THR PRO PHE SEQRES 26 A 411 ILE SER ASP LYS TYR ALA ASN SER VAL ARG THR SER PHE SEQRES 27 A 411 PHE TRP ASP MET GLY THR VAL TRP ASP THR ASN TRP ASP SEQRES 28 A 411 SER SER GLN TYR SER GLY TYR PRO ASP TYR SER ASP PRO SEQRES 29 A 411 SER ASN ILE ARG MET SER ALA GLY ILE ALA LEU GLN TRP SEQRES 30 A 411 MET SER PRO LEU GLY PRO LEU VAL PHE SER TYR ALA GLN SEQRES 31 A 411 PRO PHE LYS LYS TYR ASP GLY ASP LYS ALA GLU GLN PHE SEQRES 32 A 411 GLN PHE ASN ILE GLY LYS THR TRP SEQRES 1 B 124 SER GLN GLY GLN LEU VAL GLU SER GLY GLY GLY MET VAL SEQRES 2 B 124 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 B 124 GLY ARG THR PHE ASN GLY TRP THR ALA ALA TRP PHE ARG SEQRES 4 B 124 GLN ALA PRO GLY LYS ASP ARG GLU PHE VAL ALA ALA ILE SEQRES 5 B 124 SER ARG SER GLY ASP TYR THR TYR TYR THR ASN SER VAL SEQRES 6 B 124 LYS GLY ARG PHE THR ILE SER ARG ASP SER ALA LYS ASN SEQRES 7 B 124 ASN LEU TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP SEQRES 8 B 124 THR ALA VAL TYR TYR CYS ALA ALA LYS THR GLY THR TRP SEQRES 9 B 124 ALA THR MET ASP ARG ARG TYR ASP TYR TRP GLY GLN GLY SEQRES 10 B 124 THR ARG VAL THR VAL SER ALA SEQRES 1 C 411 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 411 GLU ASN LEU TYR PHE GLN HIS MET ARG ASN THR GLY SER SEQRES 3 C 411 PHE ASN PHE GLY ILE GLY TYR GLY THR GLU SER GLY VAL SEQRES 4 C 411 SER PHE GLN ALA GLY VAL GLN GLN ASP ASN TRP LEU GLY SEQRES 5 C 411 THR GLY TYR ALA VAL GLY ILE ASN GLY THR LYS ASN ASP SEQRES 6 C 411 TYR GLN THR TYR ALA GLU LEU SER VAL THR ASN PRO TYR SEQRES 7 C 411 PHE THR VAL ASP GLY VAL SER LEU GLY GLY ARG LEU PHE SEQRES 8 C 411 TYR ASN ASP PHE GLN ALA ASP ASP ALA ASP LEU SER ASP SEQRES 9 C 411 TYR THR ASN LYS SER TYR GLY THR ASP VAL THR LEU GLY SEQRES 10 C 411 PHE PRO ILE ASN GLU TYR ASN SER LEU ARG ALA GLY LEU SEQRES 11 C 411 GLY TYR VAL HIS ASN SER LEU SER ASN MET GLN PRO GLN SEQRES 12 C 411 VAL ALA MET TRP ARG TYR LEU TYR SER MET GLY GLU HIS SEQRES 13 C 411 PRO SER THR SER ASP GLN ASP ASN SER PHE LYS THR ASP SEQRES 14 C 411 ASP PHE THR PHE ASN TYR GLY TRP THR TYR ASN LYS LEU SEQRES 15 C 411 ASP ARG GLY TYR PHE PRO THR ASP GLY SER ARG VAL ASN SEQRES 16 C 411 LEU THR GLY LYS VAL THR ILE PRO GLY SER ASP ASN GLU SEQRES 17 C 411 TYR TYR LYS VAL THR LEU ASP THR ALA THR TYR VAL PRO SEQRES 18 C 411 ILE ASP ASP ASP HIS LYS TRP VAL VAL LEU GLY ARG THR SEQRES 19 C 411 ARG TRP GLY TYR GLY ASP GLY LEU GLY GLY LYS GLU MET SEQRES 20 C 411 PRO PHE TYR GLU ASN PHE TYR ALA GLY GLY SER SER THR SEQRES 21 C 411 VAL ARG GLY PHE GLN SER ASN THR ILE GLY PRO LYS ALA SEQRES 22 C 411 VAL TYR PHE PRO HIS GLN ALA SER ASN TYR ASP PRO ASP SEQRES 23 C 411 TYR ASP TYR GLU SER ALA THR GLN ASP GLY ALA LYS ASP SEQRES 24 C 411 LEU SER LYS SER ASP ASP ALA VAL GLY GLY ASN ALA MET SEQRES 25 C 411 ALA VAL ALA SER LEU GLU PHE ILE THR PRO THR PRO PHE SEQRES 26 C 411 ILE SER ASP LYS TYR ALA ASN SER VAL ARG THR SER PHE SEQRES 27 C 411 PHE TRP ASP MET GLY THR VAL TRP ASP THR ASN TRP ASP SEQRES 28 C 411 SER SER GLN TYR SER GLY TYR PRO ASP TYR SER ASP PRO SEQRES 29 C 411 SER ASN ILE ARG MET SER ALA GLY ILE ALA LEU GLN TRP SEQRES 30 C 411 MET SER PRO LEU GLY PRO LEU VAL PHE SER TYR ALA GLN SEQRES 31 C 411 PRO PHE LYS LYS TYR ASP GLY ASP LYS ALA GLU GLN PHE SEQRES 32 C 411 GLN PHE ASN ILE GLY LYS THR TRP SEQRES 1 D 124 SER GLN GLY GLN LEU VAL GLU SER GLY GLY GLY MET VAL SEQRES 2 D 124 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 D 124 GLY ARG THR PHE ASN GLY TRP THR ALA ALA TRP PHE ARG SEQRES 4 D 124 GLN ALA PRO GLY LYS ASP ARG GLU PHE VAL ALA ALA ILE SEQRES 5 D 124 SER ARG SER GLY ASP TYR THR TYR TYR THR ASN SER VAL SEQRES 6 D 124 LYS GLY ARG PHE THR ILE SER ARG ASP SER ALA LYS ASN SEQRES 7 D 124 ASN LEU TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP SEQRES 8 D 124 THR ALA VAL TYR TYR CYS ALA ALA LYS THR GLY THR TRP SEQRES 9 D 124 ALA THR MET ASP ARG ARG TYR ASP TYR TRP GLY GLN GLY SEQRES 10 D 124 THR ARG VAL THR VAL SER ALA HET C8E A 901 29 HET C8E A 902 29 HET C8E A 903 22 HET C8E A 904 29 HET C8E A 905 39 HET C8E C 901 47 HET C8E C 902 22 HET C8E C 903 40 HET C8E C 904 26 HET C8E C 905 22 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 5 C8E 10(C16 H34 O5) FORMUL 15 HOH *317(H2 O) HELIX 1 AA1 PRO A 476 THR A 479 5 4 HELIX 2 AA2 ASP A 497 ASP A 500 5 4 HELIX 3 AA3 GLN A 542 MET A 552 1 11 HELIX 4 AA4 PRO A 647 ASN A 651 5 5 HELIX 5 AA5 ASP A 727 ASN A 731 5 5 HELIX 6 AA6 LYS B 88 THR B 92 5 5 HELIX 7 AA7 MET B 107 TYR B 111 5 5 HELIX 8 AA8 PRO C 476 THR C 479 5 4 HELIX 9 AA9 ASP C 497 ASP C 500 5 4 HELIX 10 AB1 GLN C 542 MET C 552 1 11 HELIX 11 AB2 PRO C 647 ASN C 651 5 5 HELIX 12 AB3 LYS C 728 ASN C 731 5 4 HELIX 13 AB4 ASN D 63 LYS D 66 5 4 HELIX 14 AB5 LYS D 88 THR D 92 5 5 HELIX 15 AB6 MET D 107 TYR D 111 5 5 SHEET 1 AA117 ASN A 427 GLY A 433 0 SHEET 2 AA117 GLY A 437 GLN A 446 -1 O SER A 439 N GLY A 431 SHEET 3 AA117 ALA A 455 LYS A 462 -1 O VAL A 456 N GLN A 446 SHEET 4 AA117 GLN A 466 THR A 474 -1 O SER A 472 N GLY A 457 SHEET 5 AA117 SER A 484 GLN A 495 -1 O GLY A 487 N VAL A 473 SHEET 6 AA117 THR A 505 PRO A 518 -1 O SER A 508 N ASN A 492 SHEET 7 AA117 ASN A 523 SER A 537 -1 O LEU A 525 N PHE A 517 SHEET 8 AA117 SER A 564 ASN A 579 -1 O PHE A 565 N LEU A 536 SHEET 9 AA117 GLY A 590 THR A 600 -1 O VAL A 593 N TYR A 578 SHEET 10 AA117 TYR A 608 PRO A 620 -1 O TYR A 618 N GLY A 590 SHEET 11 AA117 VAL A 628 GLY A 640 -1 O TRP A 635 N LEU A 613 SHEET 12 AA117 ALA A 710 THR A 720 -1 O ILE A 719 N VAL A 628 SHEET 13 AA117 VAL A 733 TRP A 745 -1 O PHE A 737 N PHE A 718 SHEET 14 AA117 ARG A 767 SER A 778 -1 O ALA A 773 N SER A 736 SHEET 15 AA117 GLY A 781 LYS A 792 -1 O PHE A 785 N LEU A 774 SHEET 16 AA117 PHE A 802 THR A 809 -1 O GLN A 803 N SER A 786 SHEET 17 AA117 ASN A 427 GLY A 433 -1 N TYR A 432 O ILE A 806 SHEET 1 AA2 2 GLY A 662 PHE A 663 0 SHEET 2 AA2 2 ALA A 799 GLU A 800 -1 O GLU A 800 N GLY A 662 SHEET 1 AA3 4 LEU B 5 SER B 8 0 SHEET 2 AA3 4 LEU B 19 ALA B 25 -1 O SER B 22 N SER B 8 SHEET 3 AA3 4 ASN B 79 MET B 84 -1 O MET B 84 N LEU B 19 SHEET 4 AA3 4 PHE B 69 ARG B 73 -1 N THR B 70 O GLN B 83 SHEET 1 AA4 6 GLY B 11 GLN B 14 0 SHEET 2 AA4 6 THR B 118 SER B 123 1 O THR B 121 N GLY B 11 SHEET 3 AA4 6 ALA B 93 LYS B 100 -1 N TYR B 95 O THR B 118 SHEET 4 AA4 6 THR B 34 GLN B 40 -1 N THR B 34 O LYS B 100 SHEET 5 AA4 6 GLU B 47 ILE B 52 -1 O GLU B 47 N ARG B 39 SHEET 6 AA4 6 THR B 59 TYR B 61 -1 O TYR B 60 N ALA B 51 SHEET 1 AA5 4 GLY B 11 GLN B 14 0 SHEET 2 AA5 4 THR B 118 SER B 123 1 O THR B 121 N GLY B 11 SHEET 3 AA5 4 ALA B 93 LYS B 100 -1 N TYR B 95 O THR B 118 SHEET 4 AA5 4 TYR B 113 TRP B 114 -1 O TYR B 113 N ALA B 99 SHEET 1 AA617 ASN C 427 GLY C 433 0 SHEET 2 AA617 GLY C 437 GLN C 446 -1 O SER C 439 N GLY C 431 SHEET 3 AA617 ALA C 455 LYS C 462 -1 O VAL C 456 N GLN C 446 SHEET 4 AA617 GLN C 466 THR C 474 -1 O TYR C 468 N THR C 461 SHEET 5 AA617 SER C 484 GLN C 495 -1 O LEU C 489 N LEU C 471 SHEET 6 AA617 THR C 505 ASN C 520 -1 O SER C 508 N ASN C 492 SHEET 7 AA617 ASN C 523 SER C 537 -1 O HIS C 533 N TYR C 509 SHEET 8 AA617 SER C 564 ASN C 579 -1 O ASN C 573 N GLY C 528 SHEET 9 AA617 GLY C 590 THR C 600 -1 O VAL C 593 N TYR C 578 SHEET 10 AA617 TYR C 608 PRO C 620 -1 O TYR C 618 N GLY C 590 SHEET 11 AA617 VAL C 628 GLY C 640 -1 O VAL C 629 N VAL C 619 SHEET 12 AA617 ALA C 710 THR C 720 -1 O ILE C 719 N VAL C 628 SHEET 13 AA617 VAL C 733 TRP C 745 -1 O PHE C 737 N PHE C 718 SHEET 14 AA617 ARG C 767 SER C 778 -1 O GLN C 775 N ARG C 734 SHEET 15 AA617 GLY C 781 LYS C 792 -1 O PHE C 785 N LEU C 774 SHEET 16 AA617 PHE C 802 ILE C 806 -1 O ASN C 805 N VAL C 784 SHEET 17 AA617 ASN C 427 GLY C 433 -1 N TYR C 432 O ILE C 806 SHEET 1 AA7 2 GLY C 662 PHE C 663 0 SHEET 2 AA7 2 ALA C 799 GLU C 800 -1 O GLU C 800 N GLY C 662 SHEET 1 AA8 4 VAL D 6 SER D 8 0 SHEET 2 AA8 4 LEU D 19 ALA D 24 -1 O SER D 22 N SER D 8 SHEET 3 AA8 4 ASN D 79 MET D 84 -1 O LEU D 80 N CYS D 23 SHEET 4 AA8 4 PHE D 69 ARG D 73 -1 N THR D 70 O GLN D 83 SHEET 1 AA9 6 GLY D 11 GLN D 14 0 SHEET 2 AA9 6 THR D 118 SER D 123 1 O SER D 123 N VAL D 13 SHEET 3 AA9 6 ALA D 93 LYS D 100 -1 N TYR D 95 O THR D 118 SHEET 4 AA9 6 THR D 34 GLN D 40 -1 N PHE D 38 O TYR D 96 SHEET 5 AA9 6 GLU D 47 ILE D 52 -1 O ALA D 50 N TRP D 37 SHEET 6 AA9 6 THR D 59 TYR D 61 -1 O TYR D 60 N ALA D 51 SHEET 1 AB1 4 GLY D 11 GLN D 14 0 SHEET 2 AB1 4 THR D 118 SER D 123 1 O SER D 123 N VAL D 13 SHEET 3 AB1 4 ALA D 93 LYS D 100 -1 N TYR D 95 O THR D 118 SHEET 4 AB1 4 TYR D 113 TRP D 114 -1 O TYR D 113 N ALA D 99 SSBOND 1 CYS B 23 CYS B 97 1555 1555 2.05 SSBOND 2 CYS D 23 CYS D 97 1555 1555 2.05 SITE 1 AC1 2 GLU A 470 TYR A 509 SITE 1 AC2 1 ILE A 458 SITE 1 AC3 1 TYR A 578 SITE 1 AC4 3 VAL A 483 LEU A 515 VAL C 599 SITE 1 AC5 6 ASP A 582 ARG A 583 THR A 588 GLN D 4 SITE 2 AC5 6 TRP D 33 TYR D 113 SITE 1 AC6 4 TRP C 627 PRO C 721 PRO C 723 PHE C 737 SITE 1 AC7 1 LEU C 489 SITE 1 AC8 4 VAL A 513 PHE C 570 GLY C 603 C8E C 904 SITE 1 AC9 2 TYR C 531 C8E C 903 SITE 1 AD1 1 SER C 484 CRYST1 99.709 86.664 125.027 90.00 105.26 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010029 0.000000 0.002736 0.00000 SCALE2 0.000000 0.011539 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008291 0.00000