HEADER DNA BINDING PROTEIN 18-JAN-19 6QIB TITLE THE CRYSTAL STRUCTURE OF POL2CORE IN COMPLEX WITH DNA AND AN INCOMING TITLE 2 NUCLEOTIDE, CARRYING AN FE-S CLUSTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA POLYMERASE II SUBUNIT A; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PRIMER_11DDC; COMPND 10 CHAIN: P; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: TEMPLATE16; COMPND 14 CHAIN: T; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: POL2, DUN2, YNL262W, N0825; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS POL EPSILON, DNA, COMPLEX, DNA BINDING PROTEIN, FE-S, P-DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR V.PARKASH,E.JOHANSSON REVDAT 6 24-JAN-24 6QIB 1 REMARK REVDAT 5 18-SEP-19 6QIB 1 REMARK REVDAT 4 17-JUL-19 6QIB 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 FORMUL LINK SITE ATOM REVDAT 3 26-JUN-19 6QIB 1 JRNL REVDAT 2 24-APR-19 6QIB 1 JRNL REVDAT 1 17-APR-19 6QIB 0 JRNL AUTH J.TER BEEK,V.PARKASH,G.O.BYLUND,P.OSTERMAN, JRNL AUTH 2 A.E.SAUER-ERIKSSON,E.JOHANSSON JRNL TITL STRUCTURAL EVIDENCE FOR AN ESSENTIAL FE-S CLUSTER IN THE JRNL TITL 2 CATALYTIC CORE DOMAIN OF DNA POLYMERASE ε. JRNL REF NUCLEIC ACIDS RES. V. 47 5712 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30968138 JRNL DOI 10.1093/NAR/GKZ248 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 36257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1868 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8608 REMARK 3 NUCLEIC ACID ATOMS : 529 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 18.51000 REMARK 3 B22 (A**2) : 24.36000 REMARK 3 B33 (A**2) : -42.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.78000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.244 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.458 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9450 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12957 ; 1.057 ; 1.612 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1119 ; 7.009 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 441 ;34.985 ;22.358 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1364 ;19.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;17.039 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1274 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7106 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6QIB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1200012322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38251 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 78.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 1.08200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4M8O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM TRIS HCL PH8, 10MM CACL2, 15% REMARK 280 PEG8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.18000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.20100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.18000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.20100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 ASP A -2 REMARK 465 PRO A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 PHE A 3 REMARK 465 GLY A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 LYS A 7 REMARK 465 ASN A 8 REMARK 465 ASN A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 THR A 14 REMARK 465 ALA A 15 REMARK 465 ARG A 16 REMARK 465 TYR A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 GLY A 20 REMARK 465 ASN A 21 REMARK 465 LYS A 22 REMARK 465 TYR A 23 REMARK 465 ASN A 24 REMARK 465 THR A 25 REMARK 465 LEU A 26 REMARK 465 SER A 27 REMARK 465 ASN A 28 REMARK 465 ASN A 29 REMARK 465 TYR A 30 REMARK 465 THR A 91 REMARK 465 LEU A 92 REMARK 465 SER A 93 REMARK 465 SER A 94 REMARK 465 GLY A 95 REMARK 465 SER A 96 REMARK 465 ASN A 97 REMARK 465 GLY A 98 REMARK 465 GLY A 99 REMARK 465 GLY A 100 REMARK 465 ASN A 101 REMARK 465 SER A 102 REMARK 465 ASN A 103 REMARK 465 ASP A 104 REMARK 465 GLY A 105 REMARK 465 GLU A 106 REMARK 465 ARG A 107 REMARK 465 VAL A 108 REMARK 465 THR A 109 REMARK 465 THR A 110 REMARK 465 ASN A 111 REMARK 465 ALA A 226 REMARK 465 ALA A 227 REMARK 465 ASN A 228 REMARK 465 GLY A 229 REMARK 465 SER A 230 REMARK 465 GLU A 231 REMARK 465 LYS A 232 REMARK 465 ASN A 713 REMARK 465 LYS A 714 REMARK 465 PHE A 715 REMARK 465 SER A 716 REMARK 465 THR A 1186 REMARK 465 LYS A 1187 REMARK 465 DC T 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 GLU A 53 CG CD OE1 OE2 REMARK 470 ARG A 63 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 64 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 65 CG OD1 OD2 REMARK 470 LYS A 67 CD CE NZ REMARK 470 ASP A 68 CG OD1 OD2 REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 GLN A 89 CG CD OE1 NE2 REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 GLU A 146 CG CD OE1 OE2 REMARK 470 GLU A 153 CG CD OE1 OE2 REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 158 CD CE NZ REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 LEU A 164 CD1 REMARK 470 LEU A 184 CG CD1 CD2 REMARK 470 GLU A 201 CG CD OE1 OE2 REMARK 470 LYS A 204 CD CE NZ REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 VAL A 218 CG1 CG2 REMARK 470 GLN A 219 CG CD OE1 NE2 REMARK 470 ASP A 234 CG OD1 OD2 REMARK 470 LYS A 236 CD CE NZ REMARK 470 HIS A 237 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 257 CE NZ REMARK 470 LYS A 299 CD CE NZ REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 LYS A 392 CG CD CE NZ REMARK 470 PHE A 464 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 GLU A 472 CG CD OE1 OE2 REMARK 470 LYS A 487 CD CE NZ REMARK 470 ARG A 541 NE CZ NH1 NH2 REMARK 470 LYS A 571 CG CD CE NZ REMARK 470 GLU A 573 CG CD OE1 OE2 REMARK 470 LYS A 575 CG CD CE NZ REMARK 470 ASP A 582 CG OD1 OD2 REMARK 470 LEU A 585 CG CD1 CD2 REMARK 470 GLU A 590 CG CD OE1 OE2 REMARK 470 LEU A 592 CD1 CD2 REMARK 470 LYS A 593 CD CE NZ REMARK 470 GLU A 597 CG CD OE1 OE2 REMARK 470 LYS A 601 CG CD CE NZ REMARK 470 LYS A 606 CG CD CE NZ REMARK 470 VAL A 607 CB CG1 CG2 REMARK 470 THR A 608 OG1 CG2 REMARK 470 PHE A 610 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 612 CG CD OE1 OE2 REMARK 470 ILE A 613 CB CG1 CG2 CD1 REMARK 470 LYS A 614 CG CD CE NZ REMARK 470 ASN A 615 CG OD1 ND2 REMARK 470 ILE A 617 CG1 CG2 CD1 REMARK 470 GLN A 619 CG CD OE1 NE2 REMARK 470 LEU A 621 CG CD1 CD2 REMARK 470 LEU A 622 CG CD1 CD2 REMARK 470 GLU A 626 CG CD OE1 OE2 REMARK 470 GLU A 632 CG CD OE1 OE2 REMARK 470 LEU A 635 CG CD1 CD2 REMARK 470 LYS A 660 CG CD CE NZ REMARK 470 GLU A 662 CG CD OE1 OE2 REMARK 470 ARG A 663 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 664 CG OD1 OD2 REMARK 470 PHE A 670 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 671 CG OD1 ND2 REMARK 470 ARG A 672 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 680 CD CE NZ REMARK 470 LYS A 693 CG CD CE NZ REMARK 470 MET A 694 CB CG SD CE REMARK 470 TYR A 697 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 698 CG OD1 ND2 REMARK 470 LYS A 701 CG CD CE NZ REMARK 470 ARG A 702 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 704 CG CD1 CD2 REMARK 470 GLN A 705 CG CD OE1 NE2 REMARK 470 ASN A 711 CG OD1 ND2 REMARK 470 LYS A 712 CD CE NZ REMARK 470 LYS A 717 CG CD CE NZ REMARK 470 LYS A 718 CG CD CE NZ REMARK 470 LYS A 719 CG CD CE NZ REMARK 470 VAL A 720 CG1 CG2 REMARK 470 LEU A 721 CG CD1 CD2 REMARK 470 PHE A 723 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 726 CG CD1 CD2 REMARK 470 ILE A 733 CG1 CG2 CD1 REMARK 470 LYS A 736 CG CD CE NZ REMARK 470 LYS A 737 CG CD CE NZ REMARK 470 ARG A 738 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 739 CG CD1 CD2 REMARK 470 GLU A 741 CG CD OE1 OE2 REMARK 470 TYR A 742 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 745 CG CD CE NZ REMARK 470 VAL A 746 CG1 CG2 REMARK 470 TYR A 747 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 747 OH REMARK 470 HIS A 748 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 789 CG CD CE NZ REMARK 470 LEU A 795 CG CD1 CD2 REMARK 470 LYS A 797 CG CD CE NZ REMARK 470 ILE A 798 CG1 CG2 CD1 REMARK 470 ASP A 799 CG OD1 OD2 REMARK 470 ASP A 802 CG OD1 OD2 REMARK 470 LYS A 803 CG CD CE NZ REMARK 470 LYS A 810 CG CD CE NZ REMARK 470 LYS A 811 CG CD CE NZ REMARK 470 LYS A 837 CD CE NZ REMARK 470 LYS A 885 CG CD CE NZ REMARK 470 PHE A 893 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 895 CG CD1 CD2 REMARK 470 GLU A 896 CG CD OE1 OE2 REMARK 470 ASN A 897 CG OD1 ND2 REMARK 470 LYS A 899 CG CD CE NZ REMARK 470 LYS A 900 CG CD CE NZ REMARK 470 LEU A 901 CG CD1 CD2 REMARK 470 GLN A 916 CD OE1 NE2 REMARK 470 LYS A 917 CG CD CE NZ REMARK 470 LYS A 927 CD CE NZ REMARK 470 LYS A 951 CG CD CE NZ REMARK 470 GLU A 960 CD OE1 OE2 REMARK 470 ILE A 965 CG1 CG2 CD1 REMARK 470 GLU A 974 CD OE1 OE2 REMARK 470 LYS A1004 CG CD CE NZ REMARK 470 GLU A1008 CD OE1 OE2 REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 MET A1036 CG SD CE REMARK 470 GLU A1040 CD OE1 OE2 REMARK 470 GLU A1060 CG CD OE1 OE2 REMARK 470 LYS A1083 CG CD CE NZ REMARK 470 LYS A1090 CE NZ REMARK 470 LYS A1096 CD CE NZ REMARK 470 ASN A1099 CG OD1 ND2 REMARK 470 ARG A1120 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1124 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1125 CG CD NE CZ NH1 NH2 REMARK 470 LEU A1132 CG CD1 CD2 REMARK 470 GLU A1133 CG CD OE1 OE2 REMARK 470 LEU A1135 CG CD1 CD2 REMARK 470 ASP A1136 CG OD1 OD2 REMARK 470 ASP A1178 CG OD1 OD2 REMARK 470 LEU A1180 CG CD1 CD2 REMARK 470 LYS A1181 CG CD CE NZ REMARK 470 ARG A1182 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 54 91.16 -67.75 REMARK 500 ARG A 63 105.56 -46.33 REMARK 500 TYR A 135 127.34 -170.12 REMARK 500 ASN A 144 -71.56 -60.87 REMARK 500 ARG A 220 -58.18 -133.91 REMARK 500 HIS A 237 2.95 -68.00 REMARK 500 ILE A 239 106.65 -56.61 REMARK 500 ARG A 370 65.14 66.36 REMARK 500 PHE A 382 -71.54 -124.48 REMARK 500 GLU A 465 -74.84 -62.57 REMARK 500 TYR A 488 -58.43 -138.22 REMARK 500 PRO A 501 35.37 -70.07 REMARK 500 THR A 552 -158.94 -140.48 REMARK 500 VAL A 598 -57.01 -123.07 REMARK 500 SER A 602 39.90 -91.37 REMARK 500 SER A 603 -123.93 51.96 REMARK 500 PHE A 610 -13.14 -48.10 REMARK 500 GLU A 612 6.03 -63.42 REMARK 500 ILE A 613 -45.92 -130.09 REMARK 500 MET A 644 -70.27 -55.45 REMARK 500 ALA A 661 -152.09 -104.59 REMARK 500 SER A 667 2.82 -68.53 REMARK 500 ASN A 671 35.51 -89.03 REMARK 500 ASP A 695 -72.60 -45.51 REMARK 500 ARG A 702 -133.86 65.38 REMARK 500 ALA A 703 -71.47 -69.13 REMARK 500 GLU A 707 -70.17 -72.77 REMARK 500 LYS A 718 -84.57 -95.54 REMARK 500 VAL A 720 140.43 -172.31 REMARK 500 HIS A 748 36.59 75.30 REMARK 500 PRO A 768 34.55 -88.43 REMARK 500 LEU A 795 17.32 -146.32 REMARK 500 LYS A 797 -70.59 -79.75 REMARK 500 ASP A 802 -3.19 73.52 REMARK 500 ALA A 805 73.22 -68.30 REMARK 500 ARG A 836 152.63 -43.91 REMARK 500 VAL A 868 -0.02 -140.67 REMARK 500 THR A 876 -67.96 68.53 REMARK 500 GLU A 889 -123.75 -80.05 REMARK 500 LYS A 917 -25.28 -147.10 REMARK 500 TYR A 923 98.45 -68.66 REMARK 500 ASN A 940 114.10 -162.91 REMARK 500 TYR A 969 161.32 170.52 REMARK 500 GLU A 991 172.76 66.96 REMARK 500 GLU A1060 105.51 -52.20 REMARK 500 THR A1103 -36.43 -38.56 REMARK 500 PHE A1112 7.36 -68.07 REMARK 500 ILE A1158 -63.49 -92.14 REMARK 500 ASN A1169 123.45 -37.44 REMARK 500 ARG A1182 1.38 -61.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 640 OD1 REMARK 620 2 ASP A 640 OD2 44.1 REMARK 620 3 VAL A 641 O 88.9 117.5 REMARK 620 4 ASP A 877 OD2 86.7 61.2 82.4 REMARK 620 5 DTP A1202 O3G 69.4 89.2 113.3 150.4 REMARK 620 6 DTP A1202 O1B 151.4 149.3 92.5 121.8 83.9 REMARK 620 7 DTP A1202 O1A 111.1 77.8 159.7 95.2 78.3 71.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 665 SG REMARK 620 2 SF4 A1201 S2 102.7 REMARK 620 3 SF4 A1201 S3 137.5 104.2 REMARK 620 4 SF4 A1201 S4 100.0 104.2 104.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 668 SG REMARK 620 2 SF4 A1201 S1 126.5 REMARK 620 3 SF4 A1201 S3 88.8 104.0 REMARK 620 4 SF4 A1201 S4 122.7 104.4 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1201 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 677 SG REMARK 620 2 SF4 A1201 S1 106.7 REMARK 620 3 SF4 A1201 S2 118.1 104.5 REMARK 620 4 SF4 A1201 S4 117.6 104.5 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1201 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 763 SG REMARK 620 2 SF4 A1201 S1 100.9 REMARK 620 3 SF4 A1201 S2 114.2 104.6 REMARK 620 4 SF4 A1201 S3 125.6 104.5 104.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DTP A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 1203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6H1V RELATED DB: PDB REMARK 900 YEAST POL2CORE DBREF 6QIB A 1 1187 UNP P21951 DPOE_YEAST 1 1187 DBREF 6QIB P 1 11 PDB 6QIB 6QIB 1 11 DBREF 6QIB T 1 16 PDB 6QIB 6QIB 1 16 SEQADV 6QIB GLY A -4 UNP P21951 EXPRESSION TAG SEQADV 6QIB GLY A -3 UNP P21951 EXPRESSION TAG SEQADV 6QIB ASP A -2 UNP P21951 EXPRESSION TAG SEQADV 6QIB PRO A -1 UNP P21951 EXPRESSION TAG SEQADV 6QIB HIS A 0 UNP P21951 EXPRESSION TAG SEQADV 6QIB ALA A 290 UNP P21951 ASP 290 ENGINEERED MUTATION SEQADV 6QIB ALA A 292 UNP P21951 GLU 292 ENGINEERED MUTATION SEQRES 1 A 1192 GLY GLY ASP PRO HIS MET MET PHE GLY LYS LYS LYS ASN SEQRES 2 A 1192 ASN GLY GLY SER SER THR ALA ARG TYR SER ALA GLY ASN SEQRES 3 A 1192 LYS TYR ASN THR LEU SER ASN ASN TYR ALA LEU SER ALA SEQRES 4 A 1192 GLN GLN LEU LEU ASN ALA SER LYS ILE ASP ASP ILE ASP SEQRES 5 A 1192 SER MET MET GLY PHE GLU ARG TYR VAL PRO PRO GLN TYR SEQRES 6 A 1192 ASN GLY ARG PHE ASP ALA LYS ASP ILE ASP GLN ILE PRO SEQRES 7 A 1192 GLY ARG VAL GLY TRP LEU THR ASN MET HIS ALA THR LEU SEQRES 8 A 1192 VAL SER GLN GLU THR LEU SER SER GLY SER ASN GLY GLY SEQRES 9 A 1192 GLY ASN SER ASN ASP GLY GLU ARG VAL THR THR ASN GLN SEQRES 10 A 1192 GLY ILE SER GLY VAL ASP PHE TYR PHE LEU ASP GLU GLU SEQRES 11 A 1192 GLY GLY SER PHE LYS SER THR VAL VAL TYR ASP PRO TYR SEQRES 12 A 1192 PHE PHE ILE ALA CYS ASN ASP GLU SER ARG VAL ASN ASP SEQRES 13 A 1192 VAL GLU GLU LEU VAL LYS LYS TYR LEU GLU SER CYS LEU SEQRES 14 A 1192 LYS SER LEU GLN ILE ILE ARG LYS GLU ASP LEU THR MET SEQRES 15 A 1192 ASP ASN HIS LEU LEU GLY LEU GLN LYS THR LEU ILE LYS SEQRES 16 A 1192 LEU SER PHE VAL ASN SER ASN GLN LEU PHE GLU ALA ARG SEQRES 17 A 1192 LYS LEU LEU ARG PRO ILE LEU GLN ASP ASN ALA ASN ASN SEQRES 18 A 1192 ASN VAL GLN ARG ASN ILE TYR ASN VAL ALA ALA ASN GLY SEQRES 19 A 1192 SER GLU LYS VAL ASP ALA LYS HIS LEU ILE GLU ASP ILE SEQRES 20 A 1192 ARG GLU TYR ASP VAL PRO TYR HIS VAL ARG VAL SER ILE SEQRES 21 A 1192 ASP LYS ASP ILE ARG VAL GLY LYS TRP TYR LYS VAL THR SEQRES 22 A 1192 GLN GLN GLY PHE ILE GLU ASP THR ARG LYS ILE ALA PHE SEQRES 23 A 1192 ALA ASP PRO VAL VAL MET ALA PHE ALA ILE ALA THR THR SEQRES 24 A 1192 LYS PRO PRO LEU LYS PHE PRO ASP SER ALA VAL ASP GLN SEQRES 25 A 1192 ILE MET MET ILE SER TYR MET ILE ASP GLY GLU GLY PHE SEQRES 26 A 1192 LEU ILE THR ASN ARG GLU ILE ILE SER GLU ASP ILE GLU SEQRES 27 A 1192 ASP PHE GLU TYR THR PRO LYS PRO GLU TYR PRO GLY PHE SEQRES 28 A 1192 PHE THR ILE PHE ASN GLU ASN ASP GLU VAL ALA LEU LEU SEQRES 29 A 1192 GLN ARG PHE PHE GLU HIS ILE ARG ASP VAL ARG PRO THR SEQRES 30 A 1192 VAL ILE SER THR PHE ASN GLY ASP PHE PHE ASP TRP PRO SEQRES 31 A 1192 PHE ILE HIS ASN ARG SER LYS ILE HIS GLY LEU ASP MET SEQRES 32 A 1192 PHE ASP GLU ILE GLY PHE ALA PRO ASP ALA GLU GLY GLU SEQRES 33 A 1192 TYR LYS SER SER TYR CYS SER HIS MET ASP CYS PHE ARG SEQRES 34 A 1192 TRP VAL LYS ARG ASP SER TYR LEU PRO GLN GLY SER GLN SEQRES 35 A 1192 GLY LEU LYS ALA VAL THR GLN SER LYS LEU GLY TYR ASN SEQRES 36 A 1192 PRO ILE GLU LEU ASP PRO GLU LEU MET THR PRO TYR ALA SEQRES 37 A 1192 PHE GLU LYS PRO GLN HIS LEU SER GLU TYR SER VAL SER SEQRES 38 A 1192 ASP ALA VAL ALA THR TYR TYR LEU TYR MET LYS TYR VAL SEQRES 39 A 1192 HIS PRO PHE ILE PHE SER LEU CYS THR ILE ILE PRO LEU SEQRES 40 A 1192 ASN PRO ASP GLU THR LEU ARG LYS GLY THR GLY THR LEU SEQRES 41 A 1192 CYS GLU MET LEU LEU MET VAL GLN ALA TYR GLN HIS ASN SEQRES 42 A 1192 ILE LEU LEU PRO ASN LYS HIS THR ASP PRO ILE GLU ARG SEQRES 43 A 1192 PHE TYR ASP GLY HIS LEU LEU GLU SER GLU THR TYR VAL SEQRES 44 A 1192 GLY GLY HIS VAL GLU SER LEU GLU ALA GLY VAL PHE ARG SEQRES 45 A 1192 SER ASP LEU LYS ASN GLU PHE LYS ILE ASP PRO SER ALA SEQRES 46 A 1192 ILE ASP GLU LEU LEU GLN GLU LEU PRO GLU ALA LEU LYS SEQRES 47 A 1192 PHE SER VAL GLU VAL GLU ASN LYS SER SER VAL ASP LYS SEQRES 48 A 1192 VAL THR ASN PHE GLU GLU ILE LYS ASN GLN ILE THR GLN SEQRES 49 A 1192 LYS LEU LEU GLU LEU LYS GLU ASN ASN ILE ARG ASN GLU SEQRES 50 A 1192 LEU PRO LEU ILE TYR HIS VAL ASP VAL ALA SER MET TYR SEQRES 51 A 1192 PRO ASN ILE MET THR THR ASN ARG LEU GLN PRO ASP SER SEQRES 52 A 1192 ILE LYS ALA GLU ARG ASP CYS ALA SER CYS ASP PHE ASN SEQRES 53 A 1192 ARG PRO GLY LYS THR CYS ALA ARG LYS LEU LYS TRP ALA SEQRES 54 A 1192 TRP ARG GLY GLU PHE PHE PRO SER LYS MET ASP GLU TYR SEQRES 55 A 1192 ASN MET ILE LYS ARG ALA LEU GLN ASN GLU THR PHE PRO SEQRES 56 A 1192 ASN LYS ASN LYS PHE SER LYS LYS LYS VAL LEU THR PHE SEQRES 57 A 1192 ASP GLU LEU SER TYR ALA ASP GLN VAL ILE HIS ILE LYS SEQRES 58 A 1192 LYS ARG LEU THR GLU TYR SER ARG LYS VAL TYR HIS ARG SEQRES 59 A 1192 VAL LYS VAL SER GLU ILE VAL GLU ARG GLU ALA ILE VAL SEQRES 60 A 1192 CYS GLN ARG GLU ASN PRO PHE TYR VAL ASP THR VAL LYS SEQRES 61 A 1192 SER PHE ARG ASP ARG ARG TYR GLU PHE LYS GLY LEU ALA SEQRES 62 A 1192 LYS THR TRP LYS GLY ASN LEU SER LYS ILE ASP PRO SER SEQRES 63 A 1192 ASP LYS HIS ALA ARG ASP GLU ALA LYS LYS MET ILE VAL SEQRES 64 A 1192 LEU TYR ASP SER LEU GLN LEU ALA HIS LYS VAL ILE LEU SEQRES 65 A 1192 ASN SER PHE TYR GLY TYR VAL MET ARG LYS GLY SER ARG SEQRES 66 A 1192 TRP TYR SER MET GLU MET ALA GLY ILE THR CYS LEU THR SEQRES 67 A 1192 GLY ALA THR ILE ILE GLN MET ALA ARG ALA LEU VAL GLU SEQRES 68 A 1192 ARG VAL GLY ARG PRO LEU GLU LEU ASP THR ASP GLY ILE SEQRES 69 A 1192 TRP CYS ILE LEU PRO LYS SER PHE PRO GLU THR TYR PHE SEQRES 70 A 1192 PHE THR LEU GLU ASN GLY LYS LYS LEU TYR LEU SER TYR SEQRES 71 A 1192 PRO CYS SER MET LEU ASN TYR ARG VAL HIS GLN LYS PHE SEQRES 72 A 1192 THR ASN HIS GLN TYR GLN GLU LEU LYS ASP PRO LEU ASN SEQRES 73 A 1192 TYR ILE TYR GLU THR HIS SER GLU ASN THR ILE PHE PHE SEQRES 74 A 1192 GLU VAL ASP GLY PRO TYR LYS ALA MET ILE LEU PRO SER SEQRES 75 A 1192 SER LYS GLU GLU GLY LYS GLY ILE LYS LYS ARG TYR ALA SEQRES 76 A 1192 VAL PHE ASN GLU ASP GLY SER LEU ALA GLU LEU LYS GLY SEQRES 77 A 1192 PHE GLU LEU LYS ARG ARG GLY GLU LEU GLN LEU ILE LYS SEQRES 78 A 1192 ASN PHE GLN SER ASP ILE PHE LYS VAL PHE LEU GLU GLY SEQRES 79 A 1192 ASP THR LEU GLU GLY CYS TYR SER ALA VAL ALA SER VAL SEQRES 80 A 1192 CYS ASN ARG TRP LEU ASP VAL LEU ASP SER HIS GLY LEU SEQRES 81 A 1192 MET LEU GLU ASP GLU ASP LEU VAL SER LEU ILE CYS GLU SEQRES 82 A 1192 ASN ARG SER MET SER LYS THR LEU LYS GLU TYR GLU GLY SEQRES 83 A 1192 GLN LYS SER THR SER ILE THR THR ALA ARG ARG LEU GLY SEQRES 84 A 1192 ASP PHE LEU GLY GLU ASP MET VAL LYS ASP LYS GLY LEU SEQRES 85 A 1192 GLN CYS LYS TYR ILE ILE SER SER LYS PRO PHE ASN ALA SEQRES 86 A 1192 PRO VAL THR GLU ARG ALA ILE PRO VAL ALA ILE PHE SER SEQRES 87 A 1192 ALA ASP ILE PRO ILE LYS ARG SER PHE LEU ARG ARG TRP SEQRES 88 A 1192 THR LEU ASP PRO SER LEU GLU ASP LEU ASP ILE ARG THR SEQRES 89 A 1192 ILE ILE ASP TRP GLY TYR TYR ARG GLU ARG LEU GLY SER SEQRES 90 A 1192 ALA ILE GLN LYS ILE ILE THR ILE PRO ALA ALA LEU GLN SEQRES 91 A 1192 GLY VAL SER ASN PRO VAL PRO ARG VAL GLU HIS PRO ASP SEQRES 92 A 1192 TRP LEU LYS ARG LYS ILE ALA THR LYS SEQRES 1 P 11 DT DA DA DC DC DG DC DG DT DT DOC SEQRES 1 T 16 DC DT DC DT DT DG DA DA DC DG DC DG DG SEQRES 2 T 16 DT DT DA HET DOC P 11 18 HET SF4 A1201 8 HET DTP A1202 30 HET CA A1203 1 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 4 SF4 FE4 S4 FORMUL 5 DTP C10 H16 N5 O12 P3 FORMUL 6 CA CA 2+ HELIX 1 AA1 ALA A 31 MET A 50 1 20 HELIX 2 AA2 ASP A 65 ILE A 69 5 5 HELIX 3 AA3 VAL A 149 LEU A 160 1 12 HELIX 4 AA4 ASN A 195 ASN A 213 1 19 HELIX 5 AA5 ALA A 235 HIS A 237 5 3 HELIX 6 AA6 PRO A 248 ASP A 258 1 11 HELIX 7 AA7 ASP A 354 ARG A 370 1 17 HELIX 8 AA8 PHE A 382 HIS A 394 1 13 HELIX 9 AA9 ASP A 397 GLY A 403 1 7 HELIX 10 AB1 CYS A 422 SER A 430 1 9 HELIX 11 AB2 PRO A 433 GLN A 437 5 5 HELIX 12 AB3 GLY A 438 GLY A 448 1 11 HELIX 13 AB4 ASP A 455 THR A 460 1 6 HELIX 14 AB5 PRO A 461 PHE A 464 5 4 HELIX 15 AB6 LYS A 466 CYS A 497 1 32 HELIX 16 AB7 ASN A 503 LYS A 510 1 8 HELIX 17 AB8 GLY A 511 HIS A 527 1 17 HELIX 18 AB9 ASP A 577 VAL A 598 1 22 HELIX 19 AC1 ILE A 617 ASN A 627 1 11 HELIX 20 AC2 SER A 643 ASN A 652 1 10 HELIX 21 AC3 GLN A 655 ASP A 657 5 3 HELIX 22 AC4 ALA A 661 SER A 667 1 7 HELIX 23 AC5 LYS A 693 ILE A 700 1 8 HELIX 24 AC6 THR A 722 LEU A 726 5 5 HELIX 25 AC7 SER A 727 HIS A 748 1 22 HELIX 26 AC8 PRO A 768 LEU A 795 1 28 HELIX 27 AC9 ASP A 807 TYR A 833 1 27 HELIX 28 AD1 VAL A 834 ARG A 836 5 3 HELIX 29 AD2 SER A 843 ARG A 867 1 25 HELIX 30 AD3 TYR A 905 GLN A 916 1 12 HELIX 31 AD4 LEU A 992 VAL A 1005 1 14 HELIX 32 AD5 PHE A 1006 GLU A 1008 5 3 HELIX 33 AD6 THR A 1011 ASP A 1031 1 21 HELIX 34 AD7 GLU A 1038 CYS A 1047 1 10 HELIX 35 AD8 THR A 1055 GLU A 1060 5 6 HELIX 36 AD9 SER A 1064 GLY A 1078 1 15 HELIX 37 AE1 GLU A 1079 LYS A 1083 5 5 HELIX 38 AE2 PRO A 1101 GLU A 1104 5 4 HELIX 39 AE3 ALA A 1110 ALA A 1114 5 5 HELIX 40 AE4 ASP A 1115 TRP A 1126 1 12 HELIX 41 AE5 ASP A 1136 ILE A 1141 1 6 HELIX 42 AE6 ASP A 1142 ILE A 1158 1 17 HELIX 43 AE7 ILE A 1158 GLN A 1165 1 8 HELIX 44 AE8 PRO A 1177 ALA A 1185 1 9 SHEET 1 AA1 5 SER A 128 VAL A 134 0 SHEET 2 AA1 5 ILE A 114 ASP A 123 -1 N PHE A 119 O SER A 131 SHEET 3 AA1 5 ARG A 75 VAL A 87 -1 N TRP A 78 O LEU A 122 SHEET 4 AA1 5 TRP A 264 THR A 268 -1 O TYR A 265 N GLY A 77 SHEET 5 AA1 5 GLY A 271 GLU A 274 -1 O GLY A 271 N THR A 268 SHEET 1 AA2 4 SER A 166 LYS A 172 0 SHEET 2 AA2 4 LYS A 186 SER A 192 -1 O LYS A 190 N GLN A 168 SHEET 3 AA2 4 TYR A 138 CYS A 143 -1 N PHE A 139 O LEU A 191 SHEET 4 AA2 4 ILE A 239 ARG A 243 -1 O ASP A 241 N ALA A 142 SHEET 1 AA3 7 PHE A 335 GLU A 336 0 SHEET 2 AA3 7 PHE A 346 GLU A 352 -1 O PHE A 347 N PHE A 335 SHEET 3 AA3 7 GLU A 318 ASN A 324 1 N LEU A 321 O PHE A 350 SHEET 4 AA3 7 ILE A 308 ILE A 315 -1 N ILE A 315 O GLU A 318 SHEET 5 AA3 7 VAL A 286 THR A 293 -1 N ALA A 292 O MET A 310 SHEET 6 AA3 7 VAL A 373 THR A 376 1 O SER A 375 N MET A 287 SHEET 7 AA3 7 SER A 418 ASP A 421 1 O SER A 418 N ILE A 374 SHEET 1 AA4 2 PHE A 404 PRO A 406 0 SHEET 2 AA4 2 TYR A 412 SER A 414 -1 O LYS A 413 N ALA A 405 SHEET 1 AA5 5 PHE A 542 TYR A 543 0 SHEET 2 AA5 5 HIS A 546 TYR A 553 -1 O HIS A 546 N TYR A 543 SHEET 3 AA5 5 ALA A 678 PHE A 689 -1 O GLU A 688 N GLU A 549 SHEET 4 AA5 5 VAL A 752 CYS A 763 -1 O VAL A 762 N ARG A 679 SHEET 5 AA5 5 ILE A 659 LYS A 660 -1 N LYS A 660 O ILE A 761 SHEET 1 AA6 5 VAL A 558 SER A 560 0 SHEET 2 AA6 5 ARG A 870 ASP A 875 -1 O LEU A 874 N GLU A 559 SHEET 3 AA6 5 GLY A 878 PRO A 884 -1 O TRP A 880 N GLU A 873 SHEET 4 AA6 5 PRO A 634 VAL A 641 -1 N TYR A 637 O CYS A 881 SHEET 5 AA6 5 PHE A 944 VAL A 946 -1 O GLU A 945 N ASP A 640 SHEET 1 AA7 4 GLY A 564 ARG A 567 0 SHEET 2 AA7 4 ALA A 952 LEU A 955 -1 O LEU A 955 N GLY A 564 SHEET 3 AA7 4 TYR A 969 PHE A 972 -1 O ALA A 970 N ILE A 954 SHEET 4 AA7 4 LEU A 978 LYS A 982 -1 O GLU A 980 N VAL A 971 SHEET 1 AA8 2 ASN A 572 LYS A 575 0 SHEET 2 AA8 2 ILE A 629 GLU A 632 -1 O GLU A 632 N ASN A 572 SHEET 1 AA9 2 THR A 890 TYR A 891 0 SHEET 2 AA9 2 LEU A 903 SER A 904 -1 O LEU A 903 N TYR A 891 SHEET 1 AB1 2 ASN A 920 ASP A 928 0 SHEET 2 AB1 2 ILE A 933 GLU A 939 -1 O GLU A 939 N ASN A 920 SHEET 1 AB2 3 GLU A1048 SER A1051 0 SHEET 2 AB2 3 GLN A1088 ILE A1093 -1 O CYS A1089 N ARG A1050 SHEET 3 AB2 3 ALA A1106 PRO A1108 -1 O ILE A1107 N ILE A1092 LINK O3' DT P 10 P DOC P 11 1555 1555 1.58 LINK OD1 ASP A 640 CA CA A1203 1555 1555 3.05 LINK OD2 ASP A 640 CA CA A1203 1555 1555 2.79 LINK O VAL A 641 CA CA A1203 1555 1555 2.19 LINK SG CYS A 665 FE1 SF4 A1201 1555 1555 2.30 LINK SG CYS A 668 FE2 SF4 A1201 1555 1555 2.31 LINK SG CYS A 677 FE3 SF4 A1201 1555 1555 2.29 LINK SG CYS A 763 FE4 SF4 A1201 1555 1555 2.27 LINK OD2 ASP A 877 CA CA A1203 1555 1555 2.06 LINK O3G DTP A1202 CA CA A1203 1555 1555 2.09 LINK O1B DTP A1202 CA CA A1203 1555 1555 2.08 LINK O1A DTP A1202 CA CA A1203 1555 1555 2.11 CISPEP 1 LYS A 1096 PRO A 1097 0 -1.18 SITE 1 AC1 6 CYS A 665 CYS A 668 CYS A 677 ALA A 678 SITE 2 AC1 6 CYS A 763 ARG A 765 SITE 1 AC2 15 ASP A 640 VAL A 641 ALA A 642 SER A 643 SITE 2 AC2 15 MET A 644 TYR A 645 ARG A 781 LYS A 785 SITE 3 AC2 15 LYS A 824 ASN A 828 ASP A 877 CA A1203 SITE 4 AC2 15 DOC P 11 DT T 5 DG T 6 SITE 1 AC3 4 ASP A 640 VAL A 641 ASP A 877 DTP A1202 CRYST1 158.360 70.402 154.240 90.00 112.99 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006315 0.000000 0.002679 0.00000 SCALE2 0.000000 0.014204 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007043 0.00000