data_6QJT # _entry.id 6QJT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6QJT pdb_00006qjt 10.2210/pdb6qjt/pdb WWPDB D_1292100299 ? ? EMDB EMD-4567 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-03-25 2 'Structure model' 1 1 2020-04-22 3 'Structure model' 1 2 2020-06-03 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.title' 11 3 'Structure model' '_citation_author.identifier_ORCID' 12 4 'Structure model' '_database_2.pdbx_DOI' 13 4 'Structure model' '_database_2.pdbx_database_accession' 14 4 'Structure model' '_pdbx_struct_oper_list.name' 15 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6QJT _pdbx_database_status.recvd_initial_deposition_date 2019-01-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'Contains the procapsid from which the portal reconstruction was derived' EMD-4445 'other EM volume' EMDB 'Viral pore protein' EMD-4567 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bayfield, O.W.' 1 0000-0003-1421-7780 'Antson, A.A.' 2 0000-0002-4533-3816 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM structure in situ reveals a molecular switch that safeguards virus against genome loss.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.55517 _citation.pdbx_database_id_PubMed 32286226 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bayfield, O.W.' 1 0000-0003-1421-7780 primary 'Steven, A.C.' 2 ? primary 'Antson, A.A.' 3 0000-0002-4533-3816 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Portal protein' _entity.formula_weight 49714.141 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIR SAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPFN IDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGLERFM IGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGIDFNTVQ LNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEERNDFSAAANLMGMLINAVKD SEDIPTELKALIDALPSKMRRALGVVDEVREAVRQPADSRYLYTRRRR ; _entity_poly.pdbx_seq_one_letter_code_can ;MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIR SAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPFN IDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGLERFM IGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGIDFNTVQ LNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEERNDFSAAANLMGMLINAVKD SEDIPTELKALIDALPSKMRRALGVVDEVREAVRQPADSRYLYTRRRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LYS n 1 4 ARG n 1 5 GLY n 1 6 ARG n 1 7 LYS n 1 8 PRO n 1 9 LYS n 1 10 GLU n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 GLY n 1 15 PRO n 1 16 GLY n 1 17 SER n 1 18 ILE n 1 19 ASP n 1 20 PRO n 1 21 SER n 1 22 ASP n 1 23 VAL n 1 24 PRO n 1 25 LYS n 1 26 LEU n 1 27 GLU n 1 28 GLY n 1 29 ALA n 1 30 SER n 1 31 VAL n 1 32 PRO n 1 33 VAL n 1 34 MET n 1 35 SER n 1 36 THR n 1 37 SER n 1 38 TYR n 1 39 ASP n 1 40 VAL n 1 41 VAL n 1 42 VAL n 1 43 ASP n 1 44 ARG n 1 45 GLU n 1 46 PHE n 1 47 ASP n 1 48 GLU n 1 49 LEU n 1 50 LEU n 1 51 GLN n 1 52 GLY n 1 53 LYS n 1 54 ASP n 1 55 GLY n 1 56 LEU n 1 57 LEU n 1 58 VAL n 1 59 TYR n 1 60 HIS n 1 61 LYS n 1 62 MET n 1 63 LEU n 1 64 SER n 1 65 ASP n 1 66 GLY n 1 67 THR n 1 68 VAL n 1 69 LYS n 1 70 ASN n 1 71 ALA n 1 72 LEU n 1 73 ASN n 1 74 TYR n 1 75 ILE n 1 76 PHE n 1 77 GLY n 1 78 ARG n 1 79 ILE n 1 80 ARG n 1 81 SER n 1 82 ALA n 1 83 LYS n 1 84 TRP n 1 85 TYR n 1 86 VAL n 1 87 GLU n 1 88 PRO n 1 89 ALA n 1 90 SER n 1 91 THR n 1 92 ASP n 1 93 PRO n 1 94 GLU n 1 95 ASP n 1 96 ILE n 1 97 ALA n 1 98 ILE n 1 99 ALA n 1 100 ALA n 1 101 PHE n 1 102 ILE n 1 103 HIS n 1 104 ALA n 1 105 GLN n 1 106 LEU n 1 107 GLY n 1 108 ILE n 1 109 ASP n 1 110 ASP n 1 111 ALA n 1 112 SER n 1 113 VAL n 1 114 GLY n 1 115 LYS n 1 116 TYR n 1 117 PRO n 1 118 PHE n 1 119 GLY n 1 120 ARG n 1 121 LEU n 1 122 PHE n 1 123 ALA n 1 124 ILE n 1 125 TYR n 1 126 GLU n 1 127 ASN n 1 128 ALA n 1 129 TYR n 1 130 ILE n 1 131 TYR n 1 132 GLY n 1 133 MET n 1 134 ALA n 1 135 ALA n 1 136 GLY n 1 137 GLU n 1 138 ILE n 1 139 VAL n 1 140 LEU n 1 141 THR n 1 142 LEU n 1 143 GLY n 1 144 ALA n 1 145 ASP n 1 146 GLY n 1 147 LYS n 1 148 LEU n 1 149 ILE n 1 150 LEU n 1 151 ASP n 1 152 LYS n 1 153 ILE n 1 154 VAL n 1 155 PRO n 1 156 ILE n 1 157 HIS n 1 158 PRO n 1 159 PHE n 1 160 ASN n 1 161 ILE n 1 162 ASP n 1 163 GLU n 1 164 VAL n 1 165 LEU n 1 166 TYR n 1 167 ASP n 1 168 GLU n 1 169 GLU n 1 170 GLY n 1 171 GLY n 1 172 PRO n 1 173 LYS n 1 174 ALA n 1 175 LEU n 1 176 LYS n 1 177 LEU n 1 178 SER n 1 179 GLY n 1 180 GLU n 1 181 VAL n 1 182 LYS n 1 183 GLY n 1 184 GLY n 1 185 SER n 1 186 GLN n 1 187 PHE n 1 188 VAL n 1 189 ASN n 1 190 GLY n 1 191 LEU n 1 192 GLU n 1 193 ILE n 1 194 PRO n 1 195 ILE n 1 196 TRP n 1 197 LYS n 1 198 THR n 1 199 VAL n 1 200 VAL n 1 201 PHE n 1 202 LEU n 1 203 HIS n 1 204 ASN n 1 205 ASP n 1 206 ASP n 1 207 GLY n 1 208 SER n 1 209 PHE n 1 210 THR n 1 211 GLY n 1 212 GLN n 1 213 SER n 1 214 ALA n 1 215 LEU n 1 216 ARG n 1 217 ALA n 1 218 ALA n 1 219 VAL n 1 220 PRO n 1 221 HIS n 1 222 TRP n 1 223 LEU n 1 224 ALA n 1 225 LYS n 1 226 ARG n 1 227 ALA n 1 228 LEU n 1 229 ILE n 1 230 LEU n 1 231 LEU n 1 232 ILE n 1 233 ASN n 1 234 HIS n 1 235 GLY n 1 236 LEU n 1 237 GLU n 1 238 ARG n 1 239 PHE n 1 240 MET n 1 241 ILE n 1 242 GLY n 1 243 VAL n 1 244 PRO n 1 245 THR n 1 246 LEU n 1 247 THR n 1 248 ILE n 1 249 PRO n 1 250 LYS n 1 251 SER n 1 252 VAL n 1 253 ARG n 1 254 GLN n 1 255 GLY n 1 256 THR n 1 257 LYS n 1 258 GLN n 1 259 TRP n 1 260 GLU n 1 261 ALA n 1 262 ALA n 1 263 LYS n 1 264 GLU n 1 265 ILE n 1 266 VAL n 1 267 LYS n 1 268 ASN n 1 269 PHE n 1 270 VAL n 1 271 GLN n 1 272 LYS n 1 273 PRO n 1 274 ARG n 1 275 HIS n 1 276 GLY n 1 277 ILE n 1 278 ILE n 1 279 LEU n 1 280 PRO n 1 281 ASP n 1 282 ASP n 1 283 TRP n 1 284 LYS n 1 285 PHE n 1 286 ASP n 1 287 THR n 1 288 VAL n 1 289 ASP n 1 290 LEU n 1 291 LYS n 1 292 SER n 1 293 ALA n 1 294 MET n 1 295 PRO n 1 296 ASP n 1 297 ALA n 1 298 ILE n 1 299 PRO n 1 300 TYR n 1 301 LEU n 1 302 THR n 1 303 TYR n 1 304 HIS n 1 305 ASP n 1 306 ALA n 1 307 GLY n 1 308 ILE n 1 309 ALA n 1 310 ARG n 1 311 ALA n 1 312 LEU n 1 313 GLY n 1 314 ILE n 1 315 ASP n 1 316 PHE n 1 317 ASN n 1 318 THR n 1 319 VAL n 1 320 GLN n 1 321 LEU n 1 322 ASN n 1 323 MET n 1 324 GLY n 1 325 VAL n 1 326 GLN n 1 327 ALA n 1 328 VAL n 1 329 ASN n 1 330 ILE n 1 331 GLY n 1 332 GLU n 1 333 PHE n 1 334 VAL n 1 335 SER n 1 336 LEU n 1 337 THR n 1 338 GLN n 1 339 GLN n 1 340 THR n 1 341 ILE n 1 342 ILE n 1 343 SER n 1 344 LEU n 1 345 GLN n 1 346 ARG n 1 347 GLU n 1 348 PHE n 1 349 ALA n 1 350 SER n 1 351 ALA n 1 352 VAL n 1 353 ASN n 1 354 LEU n 1 355 TYR n 1 356 LEU n 1 357 ILE n 1 358 PRO n 1 359 LYS n 1 360 LEU n 1 361 VAL n 1 362 LEU n 1 363 PRO n 1 364 ASN n 1 365 TRP n 1 366 PRO n 1 367 GLY n 1 368 ALA n 1 369 THR n 1 370 ARG n 1 371 PHE n 1 372 PRO n 1 373 ARG n 1 374 LEU n 1 375 THR n 1 376 PHE n 1 377 GLU n 1 378 MET n 1 379 GLU n 1 380 GLU n 1 381 ARG n 1 382 ASN n 1 383 ASP n 1 384 PHE n 1 385 SER n 1 386 ALA n 1 387 ALA n 1 388 ALA n 1 389 ASN n 1 390 LEU n 1 391 MET n 1 392 GLY n 1 393 MET n 1 394 LEU n 1 395 ILE n 1 396 ASN n 1 397 ALA n 1 398 VAL n 1 399 LYS n 1 400 ASP n 1 401 SER n 1 402 GLU n 1 403 ASP n 1 404 ILE n 1 405 PRO n 1 406 THR n 1 407 GLU n 1 408 LEU n 1 409 LYS n 1 410 ALA n 1 411 LEU n 1 412 ILE n 1 413 ASP n 1 414 ALA n 1 415 LEU n 1 416 PRO n 1 417 SER n 1 418 LYS n 1 419 MET n 1 420 ARG n 1 421 ARG n 1 422 ALA n 1 423 LEU n 1 424 GLY n 1 425 VAL n 1 426 VAL n 1 427 ASP n 1 428 GLU n 1 429 VAL n 1 430 ARG n 1 431 GLU n 1 432 ALA n 1 433 VAL n 1 434 ARG n 1 435 GLN n 1 436 PRO n 1 437 ALA n 1 438 ASP n 1 439 SER n 1 440 ARG n 1 441 TYR n 1 442 LEU n 1 443 TYR n 1 444 THR n 1 445 ARG n 1 446 ARG n 1 447 ARG n 1 448 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 448 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Thermus virus P23-45' _entity_src_nat.pdbx_ncbi_taxonomy_id 466051 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line 'Thermus thermophilus HB8' _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 GLY 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 LYS 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 LYS 9 9 ? ? ? A . n A 1 10 GLU 10 10 ? ? ? A . n A 1 11 LEU 11 11 ? ? ? A . n A 1 12 VAL 12 12 ? ? ? A . n A 1 13 PRO 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 PRO 15 15 ? ? ? A . n A 1 16 GLY 16 16 ? ? ? A . n A 1 17 SER 17 17 ? ? ? A . n A 1 18 ILE 18 18 ? ? ? A . n A 1 19 ASP 19 19 ? ? ? A . n A 1 20 PRO 20 20 ? ? ? A . n A 1 21 SER 21 21 ? ? ? A . n A 1 22 ASP 22 22 ? ? ? A . n A 1 23 VAL 23 23 ? ? ? A . n A 1 24 PRO 24 24 ? ? ? A . n A 1 25 LYS 25 25 ? ? ? A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 HIS 103 103 103 HIS HIS A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 HIS 157 157 157 HIS HIS A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 PRO 172 172 172 PRO PRO A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 GLN 186 186 186 GLN GLN A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 TRP 196 196 196 TRP TRP A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 PHE 201 201 201 PHE PHE A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 GLN 212 212 212 GLN GLN A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 ARG 216 216 216 ARG ARG A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 PRO 220 220 220 PRO PRO A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 TRP 222 222 222 TRP TRP A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 ARG 226 226 226 ARG ARG A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 ILE 232 232 232 ILE ILE A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 HIS 234 234 234 HIS HIS A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 PHE 239 239 239 PHE PHE A . n A 1 240 MET 240 240 240 MET MET A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 GLY 242 242 242 GLY GLY A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 PRO 249 249 249 PRO PRO A . n A 1 250 LYS 250 250 250 LYS LYS A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 LYS 257 257 257 LYS LYS A . n A 1 258 GLN 258 258 258 GLN GLN A . n A 1 259 TRP 259 259 259 TRP TRP A . n A 1 260 GLU 260 260 260 GLU GLU A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 ILE 265 265 265 ILE ILE A . n A 1 266 VAL 266 266 266 VAL VAL A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ASN 268 268 268 ASN ASN A . n A 1 269 PHE 269 269 269 PHE PHE A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 GLN 271 271 271 GLN GLN A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 PRO 273 273 273 PRO PRO A . n A 1 274 ARG 274 274 274 ARG ARG A . n A 1 275 HIS 275 275 275 HIS HIS A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 ILE 278 278 278 ILE ILE A . n A 1 279 LEU 279 279 279 LEU LEU A . n A 1 280 PRO 280 280 280 PRO PRO A . n A 1 281 ASP 281 281 281 ASP ASP A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 TRP 283 283 283 TRP TRP A . n A 1 284 LYS 284 284 284 LYS LYS A . n A 1 285 PHE 285 285 285 PHE PHE A . n A 1 286 ASP 286 286 286 ASP ASP A . n A 1 287 THR 287 287 287 THR THR A . n A 1 288 VAL 288 288 288 VAL VAL A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 SER 292 292 292 SER SER A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 MET 294 294 294 MET MET A . n A 1 295 PRO 295 295 295 PRO PRO A . n A 1 296 ASP 296 296 296 ASP ASP A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 TYR 300 300 300 TYR TYR A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 THR 302 302 302 THR THR A . n A 1 303 TYR 303 303 303 TYR TYR A . n A 1 304 HIS 304 304 304 HIS HIS A . n A 1 305 ASP 305 305 305 ASP ASP A . n A 1 306 ALA 306 306 306 ALA ALA A . n A 1 307 GLY 307 307 307 GLY GLY A . n A 1 308 ILE 308 308 308 ILE ILE A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 ARG 310 310 310 ARG ARG A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 ILE 314 314 314 ILE ILE A . n A 1 315 ASP 315 315 315 ASP ASP A . n A 1 316 PHE 316 316 316 PHE PHE A . n A 1 317 ASN 317 317 317 ASN ASN A . n A 1 318 THR 318 318 318 THR THR A . n A 1 319 VAL 319 319 319 VAL VAL A . n A 1 320 GLN 320 320 320 GLN GLN A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 ASN 322 322 322 ASN ASN A . n A 1 323 MET 323 323 323 MET MET A . n A 1 324 GLY 324 324 324 GLY GLY A . n A 1 325 VAL 325 325 325 VAL VAL A . n A 1 326 GLN 326 326 326 GLN GLN A . n A 1 327 ALA 327 327 327 ALA ALA A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 ASN 329 329 329 ASN ASN A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 GLU 332 332 332 GLU GLU A . n A 1 333 PHE 333 333 333 PHE PHE A . n A 1 334 VAL 334 334 334 VAL VAL A . n A 1 335 SER 335 335 335 SER SER A . n A 1 336 LEU 336 336 336 LEU LEU A . n A 1 337 THR 337 337 337 THR THR A . n A 1 338 GLN 338 338 338 GLN GLN A . n A 1 339 GLN 339 339 339 GLN GLN A . n A 1 340 THR 340 340 340 THR THR A . n A 1 341 ILE 341 341 341 ILE ILE A . n A 1 342 ILE 342 342 342 ILE ILE A . n A 1 343 SER 343 343 343 SER SER A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 GLN 345 345 345 GLN GLN A . n A 1 346 ARG 346 346 346 ARG ARG A . n A 1 347 GLU 347 347 347 GLU GLU A . n A 1 348 PHE 348 348 348 PHE PHE A . n A 1 349 ALA 349 349 349 ALA ALA A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 VAL 352 352 352 VAL VAL A . n A 1 353 ASN 353 353 353 ASN ASN A . n A 1 354 LEU 354 354 354 LEU LEU A . n A 1 355 TYR 355 355 355 TYR TYR A . n A 1 356 LEU 356 356 356 LEU LEU A . n A 1 357 ILE 357 357 357 ILE ILE A . n A 1 358 PRO 358 358 358 PRO PRO A . n A 1 359 LYS 359 359 359 LYS LYS A . n A 1 360 LEU 360 360 360 LEU LEU A . n A 1 361 VAL 361 361 361 VAL VAL A . n A 1 362 LEU 362 362 362 LEU LEU A . n A 1 363 PRO 363 363 363 PRO PRO A . n A 1 364 ASN 364 364 364 ASN ASN A . n A 1 365 TRP 365 365 365 TRP TRP A . n A 1 366 PRO 366 366 366 PRO PRO A . n A 1 367 GLY 367 367 367 GLY GLY A . n A 1 368 ALA 368 368 368 ALA ALA A . n A 1 369 THR 369 369 369 THR THR A . n A 1 370 ARG 370 370 370 ARG ARG A . n A 1 371 PHE 371 371 371 PHE PHE A . n A 1 372 PRO 372 372 372 PRO PRO A . n A 1 373 ARG 373 373 373 ARG ARG A . n A 1 374 LEU 374 374 374 LEU LEU A . n A 1 375 THR 375 375 375 THR THR A . n A 1 376 PHE 376 376 376 PHE PHE A . n A 1 377 GLU 377 377 377 GLU GLU A . n A 1 378 MET 378 378 378 MET MET A . n A 1 379 GLU 379 379 379 GLU GLU A . n A 1 380 GLU 380 380 380 GLU GLU A . n A 1 381 ARG 381 381 381 ARG ARG A . n A 1 382 ASN 382 382 382 ASN ASN A . n A 1 383 ASP 383 383 383 ASP ASP A . n A 1 384 PHE 384 384 384 PHE PHE A . n A 1 385 SER 385 385 385 SER SER A . n A 1 386 ALA 386 386 386 ALA ALA A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 ALA 388 388 388 ALA ALA A . n A 1 389 ASN 389 389 389 ASN ASN A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 MET 391 391 391 MET MET A . n A 1 392 GLY 392 392 392 GLY GLY A . n A 1 393 MET 393 393 393 MET MET A . n A 1 394 LEU 394 394 394 LEU LEU A . n A 1 395 ILE 395 395 395 ILE ILE A . n A 1 396 ASN 396 396 396 ASN ASN A . n A 1 397 ALA 397 397 397 ALA ALA A . n A 1 398 VAL 398 398 398 VAL VAL A . n A 1 399 LYS 399 399 399 LYS LYS A . n A 1 400 ASP 400 400 400 ASP ASP A . n A 1 401 SER 401 401 401 SER SER A . n A 1 402 GLU 402 402 402 GLU GLU A . n A 1 403 ASP 403 403 403 ASP ASP A . n A 1 404 ILE 404 404 404 ILE ILE A . n A 1 405 PRO 405 405 405 PRO PRO A . n A 1 406 THR 406 406 406 THR THR A . n A 1 407 GLU 407 407 407 GLU GLU A . n A 1 408 LEU 408 408 408 LEU LEU A . n A 1 409 LYS 409 409 409 LYS LYS A . n A 1 410 ALA 410 410 410 ALA ALA A . n A 1 411 LEU 411 411 411 LEU LEU A . n A 1 412 ILE 412 412 412 ILE ILE A . n A 1 413 ASP 413 413 413 ASP ASP A . n A 1 414 ALA 414 414 414 ALA ALA A . n A 1 415 LEU 415 415 415 LEU LEU A . n A 1 416 PRO 416 416 416 PRO PRO A . n A 1 417 SER 417 417 417 SER SER A . n A 1 418 LYS 418 418 418 LYS LYS A . n A 1 419 MET 419 419 419 MET MET A . n A 1 420 ARG 420 420 420 ARG ARG A . n A 1 421 ARG 421 421 421 ARG ARG A . n A 1 422 ALA 422 422 422 ALA ALA A . n A 1 423 LEU 423 423 423 LEU LEU A . n A 1 424 GLY 424 424 424 GLY GLY A . n A 1 425 VAL 425 425 425 VAL VAL A . n A 1 426 VAL 426 426 426 VAL VAL A . n A 1 427 ASP 427 427 427 ASP ASP A . n A 1 428 GLU 428 428 428 GLU GLU A . n A 1 429 VAL 429 429 429 VAL VAL A . n A 1 430 ARG 430 430 430 ARG ARG A . n A 1 431 GLU 431 431 431 GLU GLU A . n A 1 432 ALA 432 432 432 ALA ALA A . n A 1 433 VAL 433 433 433 VAL VAL A . n A 1 434 ARG 434 434 434 ARG ARG A . n A 1 435 GLN 435 435 435 GLN GLN A . n A 1 436 PRO 436 436 436 PRO PRO A . n A 1 437 ALA 437 437 ? ? ? A . n A 1 438 ASP 438 438 ? ? ? A . n A 1 439 SER 439 439 ? ? ? A . n A 1 440 ARG 440 440 ? ? ? A . n A 1 441 TYR 441 441 ? ? ? A . n A 1 442 LEU 442 442 ? ? ? A . n A 1 443 TYR 443 443 ? ? ? A . n A 1 444 THR 444 444 ? ? ? A . n A 1 445 ARG 445 445 ? ? ? A . n A 1 446 ARG 446 446 ? ? ? A . n A 1 447 ARG 447 447 ? ? ? A . n A 1 448 ARG 448 448 ? ? ? A . n # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.13_2998: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6QJT _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QJT _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6QJT _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.74 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.005 ? 3276 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.842 ? 4450 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 11.708 ? 1964 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.051 ? 505 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 ? 574 ? f_plane_restr ? ? # _database_PDB_matrix.entry_id 6QJT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 6QJT _struct.title 'Thermophage P23-45 in situ procapsid portal protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QJT _struct_keywords.text 'portal, translocase, motor, pore, bacteriophage, thermophage, caudovirales, siphoviridae, virus, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7XXB9_9CAUD _struct_ref.pdbx_db_accession A7XXB9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIR SAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPFN IDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGLERFM IGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGIDFNTVQ LNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEERNDFSAAANLMGMLINAVKD SEDIPTELKALIDALPSKMRRALGVVDEVREAVRQPADSRYLYTRRRR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6QJT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 448 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A7XXB9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 448 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 448 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? 0.866025 -0.500000 0.000000 69.88143 0.500000 0.866025 0.000000 -40.34606 -0.000000 0.000000 1.000000 0.00000 3 'point symmetry operation' ? ? 0.500000 -0.866025 0.000000 150.57356 0.866025 0.500000 0.000000 -40.34606 -0.000000 0.000000 1.000000 0.00000 4 'point symmetry operation' ? ? 0.000000 -1.000000 0.000000 220.45499 1.000000 0.000000 0.000000 0.00000 -0.000000 0.000000 1.000000 0.00000 5 'point symmetry operation' ? ? -0.500000 -0.866025 0.000000 260.80106 0.866025 -0.500000 0.000000 69.88143 0.000000 0.000000 1.000000 0.00000 6 'point symmetry operation' ? ? -0.866025 -0.500000 0.000000 260.80105 0.500000 -0.866025 0.000000 150.57356 0.000000 0.000000 1.000000 0.00000 7 'point symmetry operation' ? ? -1.000000 -0.000000 0.000000 220.45499 0.000000 -1.000000 0.000000 220.45499 0.000000 0.000000 1.000000 0.00000 8 'point symmetry operation' ? ? -0.866025 0.500000 0.000000 150.57356 -0.500000 -0.866025 0.000000 260.80106 0.000000 0.000000 1.000000 0.00000 9 'point symmetry operation' ? ? -0.500000 0.866025 0.000000 69.88143 -0.866025 -0.500000 0.000000 260.80106 0.000000 0.000000 1.000000 0.00000 10 'point symmetry operation' ? ? -0.000000 1.000000 0.000000 -0.00000 -1.000000 -0.000000 0.000000 220.45499 0.000000 0.000000 1.000000 0.00000 11 'point symmetry operation' ? ? 0.500000 0.866025 0.000000 -40.34607 -0.866025 0.500000 0.000000 150.57356 0.000000 -0.000000 1.000000 0.00000 12 'point symmetry operation' ? ? 0.866025 0.500000 0.000000 -40.34606 -0.500000 0.866025 0.000000 69.88143 0.000000 -0.000000 1.000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 53 ? MET A 62 ? LYS A 53 MET A 62 1 ? 10 HELX_P HELX_P2 AA2 ASP A 65 ? ARG A 80 ? ASP A 65 ARG A 80 1 ? 16 HELX_P HELX_P3 AA3 ASP A 92 ? GLY A 107 ? ASP A 92 GLY A 107 1 ? 16 HELX_P HELX_P4 AA4 PRO A 117 ? GLY A 132 ? PRO A 117 GLY A 132 1 ? 16 HELX_P HELX_P5 AA5 ALA A 218 ? MET A 240 ? ALA A 218 MET A 240 1 ? 23 HELX_P HELX_P6 AA6 THR A 256 ? LYS A 272 ? THR A 256 LYS A 272 1 ? 17 HELX_P HELX_P7 AA7 ALA A 297 ? LEU A 312 ? ALA A 297 LEU A 312 1 ? 16 HELX_P HELX_P8 AA8 SER A 335 ? LEU A 356 ? SER A 335 LEU A 356 1 ? 22 HELX_P HELX_P9 AA9 ILE A 357 ? LEU A 362 ? ILE A 357 LEU A 362 1 ? 6 HELX_P HELX_P10 AB1 ASP A 383 ? LYS A 399 ? ASP A 383 LYS A 399 1 ? 17 HELX_P HELX_P11 AB2 ASP A 403 ? ALA A 414 ? ASP A 403 ALA A 414 1 ? 12 HELX_P HELX_P12 AB3 PRO A 416 ? LEU A 423 ? PRO A 416 LEU A 423 1 ? 8 HELX_P HELX_P13 AB4 ASP A 427 ? GLN A 435 ? ASP A 427 GLN A 435 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 3 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 84 ? GLU A 87 ? TRP A 84 GLU A 87 AA1 2 ARG A 373 ? PHE A 376 ? ARG A 373 PHE A 376 AA2 1 PRO A 155 ? ILE A 156 ? PRO A 155 ILE A 156 AA2 2 MET A 133 ? GLU A 137 ? MET A 133 GLU A 137 AA2 3 THR A 198 ? LEU A 202 ? THR A 198 LEU A 202 AA3 1 VAL A 139 ? LEU A 142 ? VAL A 139 LEU A 142 AA3 2 LEU A 148 ? LYS A 152 ? LEU A 148 LYS A 152 AA4 1 ILE A 161 ? TYR A 166 ? ILE A 161 TYR A 166 AA4 2 PRO A 172 ? LEU A 177 ? PRO A 172 LEU A 177 AA4 3 LEU A 191 ? PRO A 194 ? LEU A 191 PRO A 194 AA5 1 PRO A 244 ? THR A 247 ? PRO A 244 THR A 247 AA5 2 LYS A 284 ? THR A 287 ? LYS A 284 THR A 287 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 87 ? N GLU A 87 O ARG A 373 ? O ARG A 373 AA2 1 2 O ILE A 156 ? O ILE A 156 N ALA A 135 ? N ALA A 135 AA2 2 3 N ALA A 134 ? N ALA A 134 O PHE A 201 ? O PHE A 201 AA3 1 2 N VAL A 139 ? N VAL A 139 O ASP A 151 ? O ASP A 151 AA4 1 2 N LEU A 165 ? N LEU A 165 O ALA A 174 ? O ALA A 174 AA4 2 3 N LEU A 175 ? N LEU A 175 O ILE A 193 ? O ILE A 193 AA5 1 2 N THR A 245 ? N THR A 245 O ASP A 286 ? O ASP A 286 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 116 ? ? 57.46 72.13 2 1 ASN A 204 ? ? 32.88 51.12 3 1 PRO A 273 ? ? -80.85 45.32 # _em_3d_fitting.entry_id 6QJT _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6QJT _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 10025 _em_3d_reconstruction.resolution 3.74 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Thermus phage P2345' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6QJT _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 70 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_magnification 75000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.details ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate SPECIES _em_virus_entity.virus_type VIRION _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 283 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 90 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6QJT _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6QJT _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6QJT _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C12 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A GLY 5 ? A GLY 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A LYS 7 ? A LYS 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A LYS 9 ? A LYS 9 10 1 Y 1 A GLU 10 ? A GLU 10 11 1 Y 1 A LEU 11 ? A LEU 11 12 1 Y 1 A VAL 12 ? A VAL 12 13 1 Y 1 A PRO 13 ? A PRO 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A PRO 15 ? A PRO 15 16 1 Y 1 A GLY 16 ? A GLY 16 17 1 Y 1 A SER 17 ? A SER 17 18 1 Y 1 A ILE 18 ? A ILE 18 19 1 Y 1 A ASP 19 ? A ASP 19 20 1 Y 1 A PRO 20 ? A PRO 20 21 1 Y 1 A SER 21 ? A SER 21 22 1 Y 1 A ASP 22 ? A ASP 22 23 1 Y 1 A VAL 23 ? A VAL 23 24 1 Y 1 A PRO 24 ? A PRO 24 25 1 Y 1 A LYS 25 ? A LYS 25 26 1 Y 1 A ALA 437 ? A ALA 437 27 1 Y 1 A ASP 438 ? A ASP 438 28 1 Y 1 A SER 439 ? A SER 439 29 1 Y 1 A ARG 440 ? A ARG 440 30 1 Y 1 A TYR 441 ? A TYR 441 31 1 Y 1 A LEU 442 ? A LEU 442 32 1 Y 1 A TYR 443 ? A TYR 443 33 1 Y 1 A THR 444 ? A THR 444 34 1 Y 1 A ARG 445 ? A ARG 445 35 1 Y 1 A ARG 446 ? A ARG 446 36 1 Y 1 A ARG 447 ? A ARG 447 37 1 Y 1 A ARG 448 ? A ARG 448 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 100 mM NaCl ? 1 2 20 mM Tris-HCl ? 1 3 10 mM MgCl2 ? # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.596 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 466051 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Thermus phage P2345' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 99 _em_image_recording.average_exposure_time 2 _em_image_recording.details ? _em_image_recording.detector_mode INTEGRATING _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? RELION ? 1 ? ? 2 'PARTICLE SELECTION' ? Scipion ? 1 ? ? 3 'IMAGE ACQUISITION' ? EPU ? ? ? 1 4 MASKING ? ? ? ? ? ? 5 'CTF CORRECTION' ? CTFFIND ? 1 ? ? 6 'LAYERLINE INDEXING' ? ? ? ? ? ? 7 'DIFFRACTION INDEXING' ? ? ? ? ? ? 8 'MODEL FITTING' ? Coot ? ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 12 CLASSIFICATION ? RELION ? 1 ? ? 13 RECONSTRUCTION ? RELION ? 1 ? ? 14 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? 15 'MODEL REFINEMENT' ? Coot ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 300852 _em_virus_natural_host.organism 'Thermus thermophilus HB8' _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter ? _em_virus_shell.name ? _em_virus_shell.triangulation 7 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' 206377 1 'Wellcome Trust' 'United Kingdom' 103460 2 # _atom_sites.entry_id 6QJT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_