HEADER SIGNALING PROTEIN 28-JAN-19 6QK8 TITLE CRYSTAL STRUCTURE OF YEAST 14-3-3 PROTEIN (BMH1) FROM SACCHAROMYCES TITLE 2 CEREVISIAE WITH THE NHA1P (YEAST NA+/H+ ANTIPORTER) 14-3-3 BINDING TITLE 3 MOTIF SER481 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN BMH1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NA(+)/H(+) ANTIPORTER; COMPND 8 CHAIN: E, F, G, H; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: BMH1, YER177W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 12 S288C); SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 ATCC: 204508/S288C; SOURCE 17 GENE: NHA1, YLR138W, L3149, L9606.4; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 14-3-3 PROTEIN, BMH, NA+/H+ ANTIPORTER, NHA1P, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SMIDOVA,T.OBSIL,V.OBSILOVA REVDAT 2 24-JAN-24 6QK8 1 REMARK REVDAT 1 02-OCT-19 6QK8 0 JRNL AUTH A.SMIDOVA,K.STANKOVA,O.PETRVALSKA,J.LAZAR,H.SYCHROVA, JRNL AUTH 2 T.OBSIL,O.ZIMMERMANNOVA,V.OBSILOVA JRNL TITL THE ACTIVITY OF SACCHAROMYCES CEREVISIAE NA+, JRNL TITL 2 K+/H+ANTIPORTER NHA1 IS NEGATIVELY REGULATED BY 14-3-3 JRNL TITL 3 PROTEIN BINDING AT SERINE 481. JRNL REF BIOCHIM BIOPHYS ACTA MOL V.1866 18534 2019 JRNL REF 2 CELL RES JRNL REFN ISSN 1879-2596 JRNL PMID 31446061 JRNL DOI 10.1016/J.BBAMCR.2019.118534 REMARK 2 REMARK 2 RESOLUTION. 2.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 16906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.1446 - 5.2980 0.92 2653 140 0.1976 0.2356 REMARK 3 2 5.2980 - 4.2065 0.96 2749 145 0.1947 0.2443 REMARK 3 3 4.2065 - 3.6752 0.86 2483 131 0.1959 0.2541 REMARK 3 4 3.6752 - 3.3393 0.94 2684 141 0.2309 0.2948 REMARK 3 5 3.3393 - 3.1001 0.95 2763 146 0.2578 0.3150 REMARK 3 6 3.1001 - 2.9173 0.95 2728 143 0.2916 0.3585 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6997 REMARK 3 ANGLE : 0.511 9508 REMARK 3 CHIRALITY : 0.033 1116 REMARK 3 PLANARITY : 0.003 1207 REMARK 3 DIHEDRAL : 22.161 2444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QK8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100301. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SAGITALLY BENDED SI111 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16913 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.917 REMARK 200 RESOLUTION RANGE LOW (A) : 41.141 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 2.980 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.81 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5N6N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: KBR, PEG 2K MME, PH 7.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 71 REMARK 465 GLU A 72 REMARK 465 SER A 73 REMARK 465 LYS A 74 REMARK 465 GLU A 75 REMARK 465 LYS A 76 REMARK 465 SER A 77 REMARK 465 ASP A 236 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 SER B 4 REMARK 465 LEU B 208 REMARK 465 ASP B 209 REMARK 465 THR B 210 REMARK 465 LEU B 211 REMARK 465 SER B 212 REMARK 465 GLU B 213 REMARK 465 ASP B 236 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 THR C 3 REMARK 465 SER C 4 REMARK 465 ARG C 5 REMARK 465 LYS C 70 REMARK 465 GLU C 71 REMARK 465 GLU C 72 REMARK 465 SER C 73 REMARK 465 LYS C 74 REMARK 465 GLU C 75 REMARK 465 LYS C 76 REMARK 465 GLU C 207 REMARK 465 LEU C 208 REMARK 465 ASP C 209 REMARK 465 THR C 210 REMARK 465 LEU C 211 REMARK 465 SER C 212 REMARK 465 GLU C 213 REMARK 465 GLU C 214 REMARK 465 SER C 215 REMARK 465 SER C 235 REMARK 465 ASP C 236 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 GLU D 71 REMARK 465 GLU D 72 REMARK 465 SER D 73 REMARK 465 LYS D 74 REMARK 465 GLU D 75 REMARK 465 LYS D 76 REMARK 465 SER D 77 REMARK 465 GLU D 78 REMARK 465 HIS D 79 REMARK 465 GLN D 80 REMARK 465 LEU D 208 REMARK 465 ASP D 209 REMARK 465 THR D 210 REMARK 465 LEU D 211 REMARK 465 SER D 212 REMARK 465 GLU D 213 REMARK 465 GLU D 214 REMARK 465 SER D 235 REMARK 465 ASP D 236 REMARK 465 ARG G 484 REMARK 465 MET G 485 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLN A 80 CG CD OE1 NE2 REMARK 470 VAL A 81 CG1 CG2 REMARK 470 LEU A 83 CG CD1 CD2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LEU A 110 CG CD1 CD2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 SER A 139 OG REMARK 470 ARG A 143 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 ASN A 148 CG OD1 ND2 REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LEU A 196 CG CD1 CD2 REMARK 470 GLN A 199 CG CD OE1 NE2 REMARK 470 LEU A 211 CG CD1 CD2 REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 ARG B 5 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 26 CG CD OE1 OE2 REMARK 470 THR B 30 OG1 CG2 REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 GLN B 69 CG CD OE1 NE2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 LYS B 76 CG CD CE NZ REMARK 470 SER B 77 OG REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 SER B 113 OG REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 SER B 189 OG REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 GLU B 207 CG CD OE1 OE2 REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 TYR B 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 217 CG CD CE NZ REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 SER C 33 OG REMARK 470 SER C 34 OG REMARK 470 GLN C 36 CG CD OE1 NE2 REMARK 470 ARG C 62 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 63 CG1 CG2 CD1 REMARK 470 SER C 66 OG REMARK 470 GLU C 68 CG CD OE1 OE2 REMARK 470 GLN C 69 CG CD OE1 NE2 REMARK 470 SER C 77 OG REMARK 470 GLU C 82 CG CD OE1 OE2 REMARK 470 SER C 89 OG REMARK 470 LYS C 97 CG CD CE NZ REMARK 470 LYS C 120 CG CD CE NZ REMARK 470 GLU C 152 CG CD OE1 OE2 REMARK 470 LYS C 155 CG CD CE NZ REMARK 470 ASP C 191 CG OD1 OD2 REMARK 470 HIS C 195 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 198 CG CD CE NZ REMARK 470 GLN C 199 CG CD OE1 NE2 REMARK 470 LYS C 217 CG CD CE NZ REMARK 470 LEU C 221 CG CD1 CD2 REMARK 470 GLN C 224 CG CD OE1 NE2 REMARK 470 ARG C 227 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 29 CG CD CE NZ REMARK 470 ILE D 63 CG1 CG2 CD1 REMARK 470 ILE D 67 CG1 CG2 CD1 REMARK 470 GLU D 68 CG CD OE1 OE2 REMARK 470 GLN D 69 CG CD OE1 NE2 REMARK 470 LYS D 70 CG CD CE NZ REMARK 470 GLU D 82 CG CD OE1 OE2 REMARK 470 LYS D 97 CG CD CE NZ REMARK 470 GLU D 118 CG CD OE1 OE2 REMARK 470 LYS D 120 CG CD CE NZ REMARK 470 ARG D 143 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 144 CG CD OE1 OE2 REMARK 470 LYS D 145 CG CD CE NZ REMARK 470 LEU D 151 CG CD1 CD2 REMARK 470 GLU D 152 CG CD OE1 OE2 REMARK 470 LYS D 155 CG CD CE NZ REMARK 470 GLU D 159 CG CD OE1 OE2 REMARK 470 SER D 189 OG REMARK 470 LYS D 192 CG CD CE NZ REMARK 470 LEU D 196 CG CD1 CD2 REMARK 470 LYS D 198 CG CD CE NZ REMARK 470 GLN D 199 CG CD OE1 NE2 REMARK 470 GLU D 207 CG CD OE1 OE2 REMARK 470 TYR D 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 217 CG CD CE NZ REMARK 470 LEU D 221 CG CD1 CD2 REMARK 470 GLN D 224 CG CD OE1 NE2 REMARK 470 ARG D 227 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 230 CG CD1 CD2 REMARK 470 ARG F 478 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 484 CG CD NE CZ NH1 NH2 REMARK 470 MET F 485 CG SD CE REMARK 470 ARG G 478 CG CD NE CZ NH1 NH2 REMARK 470 ARG H 478 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 20 78.96 -100.18 REMARK 500 SER B 73 53.72 -92.84 REMARK 500 ALA B 206 43.50 -141.24 REMARK 500 GLU C 68 91.75 -69.91 REMARK 500 GLU D 82 32.39 -98.54 REMARK 500 HIS D 109 -52.93 -120.74 REMARK 500 ILE D 186 -59.63 -121.27 REMARK 500 HIS H 483 -167.58 -100.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 6QK8 A 1 236 UNP P29311 BMH1_YEAST 1 236 DBREF 6QK8 B 1 236 UNP P29311 BMH1_YEAST 1 236 DBREF 6QK8 C 1 236 UNP P29311 BMH1_YEAST 1 236 DBREF 6QK8 D 1 236 UNP P29311 BMH1_YEAST 1 236 DBREF 6QK8 E 478 485 UNP Q99271 NAH1_YEAST 478 485 DBREF 6QK8 F 478 485 UNP Q99271 NAH1_YEAST 478 485 DBREF 6QK8 G 478 485 UNP Q99271 NAH1_YEAST 478 485 DBREF 6QK8 H 478 485 UNP Q99271 NAH1_YEAST 478 485 SEQRES 1 A 236 MET SER THR SER ARG GLU ASP SER VAL TYR LEU ALA LYS SEQRES 2 A 236 LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU MET VAL GLU SEQRES 3 A 236 ASN MET LYS THR VAL ALA SER SER GLY GLN GLU LEU SER SEQRES 4 A 236 VAL GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 A 236 VAL ILE GLY ALA ARG ARG ALA SER TRP ARG ILE VAL SER SEQRES 6 A 236 SER ILE GLU GLN LYS GLU GLU SER LYS GLU LYS SER GLU SEQRES 7 A 236 HIS GLN VAL GLU LEU ILE CYS SER TYR ARG SER LYS ILE SEQRES 8 A 236 GLU THR GLU LEU THR LYS ILE SER ASP ASP ILE LEU SER SEQRES 9 A 236 VAL LEU ASP SER HIS LEU ILE PRO SER ALA THR THR GLY SEQRES 10 A 236 GLU SER LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR SEQRES 11 A 236 HIS ARG TYR LEU ALA GLU PHE SER SER GLY ASP ALA ARG SEQRES 12 A 236 GLU LYS ALA THR ASN ALA SER LEU GLU ALA TYR LYS THR SEQRES 13 A 236 ALA SER GLU ILE ALA THR THR GLU LEU PRO PRO THR HIS SEQRES 14 A 236 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 A 236 TYR TYR GLU ILE GLN ASN SER PRO ASP LYS ALA CYS HIS SEQRES 16 A 236 LEU ALA LYS GLN ALA PHE ASP ASP ALA ILE ALA GLU LEU SEQRES 17 A 236 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 A 236 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 A 236 SER ASP SEQRES 1 B 236 MET SER THR SER ARG GLU ASP SER VAL TYR LEU ALA LYS SEQRES 2 B 236 LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU MET VAL GLU SEQRES 3 B 236 ASN MET LYS THR VAL ALA SER SER GLY GLN GLU LEU SER SEQRES 4 B 236 VAL GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 B 236 VAL ILE GLY ALA ARG ARG ALA SER TRP ARG ILE VAL SER SEQRES 6 B 236 SER ILE GLU GLN LYS GLU GLU SER LYS GLU LYS SER GLU SEQRES 7 B 236 HIS GLN VAL GLU LEU ILE CYS SER TYR ARG SER LYS ILE SEQRES 8 B 236 GLU THR GLU LEU THR LYS ILE SER ASP ASP ILE LEU SER SEQRES 9 B 236 VAL LEU ASP SER HIS LEU ILE PRO SER ALA THR THR GLY SEQRES 10 B 236 GLU SER LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR SEQRES 11 B 236 HIS ARG TYR LEU ALA GLU PHE SER SER GLY ASP ALA ARG SEQRES 12 B 236 GLU LYS ALA THR ASN ALA SER LEU GLU ALA TYR LYS THR SEQRES 13 B 236 ALA SER GLU ILE ALA THR THR GLU LEU PRO PRO THR HIS SEQRES 14 B 236 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 B 236 TYR TYR GLU ILE GLN ASN SER PRO ASP LYS ALA CYS HIS SEQRES 16 B 236 LEU ALA LYS GLN ALA PHE ASP ASP ALA ILE ALA GLU LEU SEQRES 17 B 236 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 B 236 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 B 236 SER ASP SEQRES 1 C 236 MET SER THR SER ARG GLU ASP SER VAL TYR LEU ALA LYS SEQRES 2 C 236 LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU MET VAL GLU SEQRES 3 C 236 ASN MET LYS THR VAL ALA SER SER GLY GLN GLU LEU SER SEQRES 4 C 236 VAL GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 C 236 VAL ILE GLY ALA ARG ARG ALA SER TRP ARG ILE VAL SER SEQRES 6 C 236 SER ILE GLU GLN LYS GLU GLU SER LYS GLU LYS SER GLU SEQRES 7 C 236 HIS GLN VAL GLU LEU ILE CYS SER TYR ARG SER LYS ILE SEQRES 8 C 236 GLU THR GLU LEU THR LYS ILE SER ASP ASP ILE LEU SER SEQRES 9 C 236 VAL LEU ASP SER HIS LEU ILE PRO SER ALA THR THR GLY SEQRES 10 C 236 GLU SER LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR SEQRES 11 C 236 HIS ARG TYR LEU ALA GLU PHE SER SER GLY ASP ALA ARG SEQRES 12 C 236 GLU LYS ALA THR ASN ALA SER LEU GLU ALA TYR LYS THR SEQRES 13 C 236 ALA SER GLU ILE ALA THR THR GLU LEU PRO PRO THR HIS SEQRES 14 C 236 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 C 236 TYR TYR GLU ILE GLN ASN SER PRO ASP LYS ALA CYS HIS SEQRES 16 C 236 LEU ALA LYS GLN ALA PHE ASP ASP ALA ILE ALA GLU LEU SEQRES 17 C 236 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 C 236 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 C 236 SER ASP SEQRES 1 D 236 MET SER THR SER ARG GLU ASP SER VAL TYR LEU ALA LYS SEQRES 2 D 236 LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU MET VAL GLU SEQRES 3 D 236 ASN MET LYS THR VAL ALA SER SER GLY GLN GLU LEU SER SEQRES 4 D 236 VAL GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 D 236 VAL ILE GLY ALA ARG ARG ALA SER TRP ARG ILE VAL SER SEQRES 6 D 236 SER ILE GLU GLN LYS GLU GLU SER LYS GLU LYS SER GLU SEQRES 7 D 236 HIS GLN VAL GLU LEU ILE CYS SER TYR ARG SER LYS ILE SEQRES 8 D 236 GLU THR GLU LEU THR LYS ILE SER ASP ASP ILE LEU SER SEQRES 9 D 236 VAL LEU ASP SER HIS LEU ILE PRO SER ALA THR THR GLY SEQRES 10 D 236 GLU SER LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR SEQRES 11 D 236 HIS ARG TYR LEU ALA GLU PHE SER SER GLY ASP ALA ARG SEQRES 12 D 236 GLU LYS ALA THR ASN ALA SER LEU GLU ALA TYR LYS THR SEQRES 13 D 236 ALA SER GLU ILE ALA THR THR GLU LEU PRO PRO THR HIS SEQRES 14 D 236 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 D 236 TYR TYR GLU ILE GLN ASN SER PRO ASP LYS ALA CYS HIS SEQRES 16 D 236 LEU ALA LYS GLN ALA PHE ASP ASP ALA ILE ALA GLU LEU SEQRES 17 D 236 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 D 236 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 D 236 SER ASP SEQRES 1 E 8 ARG SER PHE SEP LEU HIS ARG MET SEQRES 1 F 8 ARG SER PHE SEP LEU HIS ARG MET SEQRES 1 G 8 ARG SER PHE SEP LEU HIS ARG MET SEQRES 1 H 8 ARG SER PHE SEP LEU HIS ARG MET MODRES 6QK8 SEP E 481 SER MODIFIED RESIDUE MODRES 6QK8 SEP F 481 SER MODIFIED RESIDUE MODRES 6QK8 SEP G 481 SER MODIFIED RESIDUE MODRES 6QK8 SEP H 481 SER MODIFIED RESIDUE HET SEP E 481 10 HET SEP F 481 10 HET SEP G 481 10 HET SEP H 481 10 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 5 SEP 4(C3 H8 N O6 P) HELIX 1 AA1 SER A 4 ALA A 18 1 15 HELIX 2 AA2 ARG A 20 SER A 33 1 14 HELIX 3 AA3 GLU A 41 GLN A 69 1 29 HELIX 4 AA4 HIS A 79 HIS A 109 1 31 HELIX 5 AA5 HIS A 109 ALA A 114 1 6 HELIX 6 AA6 THR A 116 GLU A 136 1 21 HELIX 7 AA7 GLY A 140 LEU A 165 1 26 HELIX 8 AA8 HIS A 169 ILE A 186 1 18 HELIX 9 AA9 SER A 189 GLU A 207 1 19 HELIX 10 AB1 LEU A 208 LEU A 211 5 4 HELIX 11 AB2 SER A 215 THR A 234 1 20 HELIX 12 AB3 GLU B 6 ALA B 18 1 13 HELIX 13 AB4 ARG B 20 SER B 34 1 15 HELIX 14 AB5 SER B 39 SER B 73 1 35 HELIX 15 AB6 SER B 77 HIS B 109 1 33 HELIX 16 AB7 THR B 116 SER B 138 1 23 HELIX 17 AB8 GLY B 140 LEU B 165 1 26 HELIX 18 AB9 HIS B 169 ILE B 186 1 18 HELIX 19 AC1 SER B 189 ALA B 204 1 16 HELIX 20 AC2 SER B 215 THR B 234 1 20 HELIX 21 AC3 ASP C 7 ALA C 18 1 12 HELIX 22 AC4 ARG C 20 SER C 34 1 15 HELIX 23 AC5 SER C 39 GLU C 68 1 30 HELIX 24 AC6 GLU C 78 HIS C 109 1 32 HELIX 25 AC7 THR C 116 GLU C 136 1 21 HELIX 26 AC8 GLY C 140 LEU C 165 1 26 HELIX 27 AC9 HIS C 169 ILE C 186 1 18 HELIX 28 AD1 SER C 189 ALA C 204 1 16 HELIX 29 AD2 ASP C 218 THR C 234 1 17 HELIX 30 AD3 ARG D 5 ALA D 18 1 14 HELIX 31 AD4 ARG D 20 SER D 34 1 15 HELIX 32 AD5 SER D 39 LYS D 70 1 32 HELIX 33 AD6 GLU D 82 HIS D 109 1 28 HELIX 34 AD7 HIS D 109 ALA D 114 1 6 HELIX 35 AD8 THR D 116 GLU D 136 1 21 HELIX 36 AD9 GLY D 140 GLU D 164 1 25 HELIX 37 AE1 HIS D 169 ILE D 186 1 18 HELIX 38 AE2 SER D 189 ALA D 204 1 16 HELIX 39 AE3 TYR D 216 THR D 234 1 19 LINK C PHE E 480 N SEP E 481 1555 1555 1.33 LINK C SEP E 481 N LEU E 482 1555 1555 1.33 LINK C PHE F 480 N SEP F 481 1555 1555 1.33 LINK C SEP F 481 N LEU F 482 1555 1555 1.33 LINK C PHE G 480 N SEP G 481 1555 1555 1.33 LINK C SEP G 481 N LEU G 482 1555 1555 1.33 LINK C PHE H 480 N SEP H 481 1555 1555 1.34 LINK C SEP H 481 N LEU H 482 1555 1555 1.34 CRYST1 56.850 59.112 66.700 95.90 104.14 91.19 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017590 0.000366 0.004499 0.00000 SCALE2 0.000000 0.016921 0.001893 0.00000 SCALE3 0.000000 0.000000 0.015557 0.00000