HEADER TRANSFERASE 01-FEB-19 6QLJ TITLE CRYSTAL STRUCTURE OF F181Q UBIX IN COMPLEX WITH AN OXIDISED N5-C1' TITLE 2 ADDUCT DERIVED FROM DMAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN PRENYLTRANSFERASE UBIX; COMPND 3 CHAIN: A; COMPND 4 EC: 2.5.1.129; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: UBIX, C0044_29760, C8257_05245, CAZ10_26235, CGU42_07325, SOURCE 5 DT376_15100, DZ940_19110, DZ962_23875, NCTC13719_00955, SOURCE 6 PAERUG_E15_LONDON_28_01_14_05236, PAMH19_1010, RW109_RW109_01660; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIX PRENYLTRANSFERASE FLAVIN BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.MARSHALL,D.LEYS REVDAT 3 24-JAN-24 6QLJ 1 COMPND HETNAM LINK REVDAT 2 12-JUN-19 6QLJ 1 JRNL REVDAT 1 05-JUN-19 6QLJ 0 JRNL AUTH S.A.MARSHALL,K.A.P.PAYNE,K.FISHER,M.D.WHITE,A.NI CHEALLAIGH, JRNL AUTH 2 A.BALAIKAITE,S.E.J.RIGBY,D.LEYS JRNL TITL THE UBIX FLAVIN PRENYLTRANSFERASE REACTION MECHANISM JRNL TITL 2 RESEMBLES CLASS I TERPENE CYCLASE CHEMISTRY. JRNL REF NAT COMMUN V. 10 2357 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31142738 JRNL DOI 10.1038/S41467-019-10220-1 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 22807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.1800 - 3.6800 1.00 2493 167 0.1335 0.1597 REMARK 3 2 3.6800 - 2.9200 1.00 2452 124 0.1467 0.1622 REMARK 3 3 2.9200 - 2.5500 0.99 2402 144 0.1634 0.2085 REMARK 3 4 2.5500 - 2.3200 0.99 2432 127 0.1758 0.2315 REMARK 3 5 2.3200 - 2.1500 0.99 2384 129 0.1800 0.2253 REMARK 3 6 2.1500 - 2.0300 0.98 2395 122 0.2060 0.2985 REMARK 3 7 2.0300 - 1.9300 0.98 2361 132 0.2510 0.2954 REMARK 3 8 1.9300 - 1.8400 0.97 2338 143 0.2771 0.3486 REMARK 3 9 1.8400 - 1.7700 0.96 2350 112 0.3223 0.3491 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.223 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 1606 REMARK 3 ANGLE : 1.130 2198 REMARK 3 CHIRALITY : 0.072 254 REMARK 3 PLANARITY : 0.007 288 REMARK 3 DIHEDRAL : 7.330 982 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QLJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23136 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 50.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ZAF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LMB SCREEN (MOLECULAR DIMENSIONS) D7 REMARK 280 15 % W/V PEG 3350, 0.1 M MES PH 6.2, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z+1/2 REMARK 290 15555 -X,Y+1/2,-Z+1/2 REMARK 290 16555 X,-Y+1/2,-Z+1/2 REMARK 290 17555 Z,X+1/2,Y+1/2 REMARK 290 18555 Z,-X+1/2,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y+1/2 REMARK 290 20555 -Z,X+1/2,-Y+1/2 REMARK 290 21555 Y,Z+1/2,X+1/2 REMARK 290 22555 -Y,Z+1/2,-X+1/2 REMARK 290 23555 Y,-Z+1/2,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X+1/2 REMARK 290 25555 X+1/2,Y,Z+1/2 REMARK 290 26555 -X+1/2,-Y,Z+1/2 REMARK 290 27555 -X+1/2,Y,-Z+1/2 REMARK 290 28555 X+1/2,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X,Y+1/2 REMARK 290 30555 Z+1/2,-X,-Y+1/2 REMARK 290 31555 -Z+1/2,-X,Y+1/2 REMARK 290 32555 -Z+1/2,X,-Y+1/2 REMARK 290 33555 Y+1/2,Z,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X+1/2 REMARK 290 35555 Y+1/2,-Z,-X+1/2 REMARK 290 36555 -Y+1/2,-Z,X+1/2 REMARK 290 37555 X+1/2,Y+1/2,Z REMARK 290 38555 -X+1/2,-Y+1/2,Z REMARK 290 39555 -X+1/2,Y+1/2,-Z REMARK 290 40555 X+1/2,-Y+1/2,-Z REMARK 290 41555 Z+1/2,X+1/2,Y REMARK 290 42555 Z+1/2,-X+1/2,-Y REMARK 290 43555 -Z+1/2,-X+1/2,Y REMARK 290 44555 -Z+1/2,X+1/2,-Y REMARK 290 45555 Y+1/2,Z+1/2,X REMARK 290 46555 -Y+1/2,Z+1/2,-X REMARK 290 47555 Y+1/2,-Z+1/2,-X REMARK 290 48555 -Y+1/2,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY1 37 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 37 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY3 37 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 38 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 38 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY3 38 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 39 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 39 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY3 39 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 40 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY2 40 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY3 40 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 41 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY2 41 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 41 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 42 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY2 42 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 42 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 43 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY2 43 -1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 43 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 44 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY2 44 1.000000 0.000000 0.000000 70.94350 REMARK 290 SMTRY3 44 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 45 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY2 45 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY3 45 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 46 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY2 46 0.000000 0.000000 1.000000 70.94350 REMARK 290 SMTRY3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 47 0.000000 1.000000 0.000000 70.94350 REMARK 290 SMTRY2 47 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY3 47 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 48 0.000000 -1.000000 0.000000 70.94350 REMARK 290 SMTRY2 48 0.000000 0.000000 -1.000000 70.94350 REMARK 290 SMTRY3 48 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 62000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 67860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -452.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -141.88700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -141.88700 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 -70.94350 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 70.94350 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 -70.94350 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 -70.94350 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 -70.94350 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 70.94350 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 -70.94350 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 -70.94350 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 70.94350 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 -70.94350 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 -70.94350 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 -70.94350 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 70.94350 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 -70.94350 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 -70.94350 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 -70.94350 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 539 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 542 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 544 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 552 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 VAL A -10 REMARK 465 ASP A -9 REMARK 465 LEU A -8 REMARK 465 GLY A -7 REMARK 465 THR A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 ASP A 208 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 137 79.24 -118.37 REMARK 500 GLN A 171 75.02 49.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 117 OD1 REMARK 620 2 HOH A 407 O 89.2 REMARK 620 3 HOH A 444 O 100.0 166.9 REMARK 620 4 HOH A 472 O 160.5 78.4 95.0 REMARK 620 5 HOH A 482 O 111.8 84.9 82.9 82.4 REMARK 620 6 HOH A 491 O 81.5 106.2 84.6 87.5 163.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4LS A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 303 DBREF1 6QLJ A 1 209 UNP A0A072ZCW8_PSEAI DBREF2 6QLJ A A0A072ZCW8 1 209 SEQADV 6QLJ MET A -20 UNP A0A072ZCW INITIATING METHIONINE SEQADV 6QLJ HIS A -19 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ HIS A -18 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ HIS A -17 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ HIS A -16 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ HIS A -15 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ HIS A -14 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ SER A -13 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ SER A -12 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ GLY A -11 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ VAL A -10 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ ASP A -9 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ LEU A -8 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ GLY A -7 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ THR A -6 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ GLU A -5 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ ASN A -4 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ LEU A -3 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ TYR A -2 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ GLN A -1 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ SER A 0 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLJ GLN A 181 UNP A0A072ZCW PHE 181 CONFLICT SEQRES 1 A 230 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 230 GLY THR GLU ASN LEU TYR GLN SER MET SER GLY PRO GLU SEQRES 3 A 230 ARG ILE THR LEU ALA MET THR GLY ALA SER GLY ALA GLN SEQRES 4 A 230 TYR GLY LEU ARG LEU LEU ASP CYS LEU VAL GLN GLU GLU SEQRES 5 A 230 ARG GLU VAL HIS PHE LEU ILE SER LYS ALA ALA GLN LEU SEQRES 6 A 230 VAL MET ALA THR GLU THR ASP VAL ALA LEU PRO ALA LYS SEQRES 7 A 230 PRO GLN ALA MET GLN ALA PHE LEU THR GLU TYR CYS GLY SEQRES 8 A 230 ALA ALA ALA GLY GLN ILE ARG VAL PHE GLY GLN ASN ASP SEQRES 9 A 230 TRP MET ALA PRO PRO ALA SER GLY SER SER ALA PRO ASN SEQRES 10 A 230 ALA MET VAL ILE CYS PRO CYS SER THR GLY THR LEU SER SEQRES 11 A 230 ALA VAL ALA THR GLY ALA CYS ASN ASN LEU ILE GLU ARG SEQRES 12 A 230 ALA ALA ASP VAL ALA LEU LYS GLU ARG ARG PRO LEU VAL SEQRES 13 A 230 LEU VAL PRO ARG GLU ALA PRO PHE SER SER ILE HIS LEU SEQRES 14 A 230 GLU ASN MET LEU LYS LEU SER ASN LEU GLY ALA VAL ILE SEQRES 15 A 230 LEU PRO ALA ALA PRO GLY PHE TYR HIS GLN PRO GLN SER SEQRES 16 A 230 VAL GLU ASP LEU VAL ASP GLN VAL VAL ALA ARG ILE LEU SEQRES 17 A 230 ASN THR LEU GLY ILE PRO GLN ASP MET LEU PRO ARG TRP SEQRES 18 A 230 GLY GLU GLN HIS LEU VAL SER ASP GLU HET 4LS A 301 65 HET NA A 302 1 HET PO4 A 303 5 HETNAM 4LS 1-DEOXY-1-[7,8-DIMETHYL-5-(3-METHYLBUT-2-EN-1-YL)-2,4- HETNAM 2 4LS DIOXO-1,3,4,5-TETRAHYDROBENZO[G]PTERIDIN-10(2H)-YL]-5- HETNAM 3 4LS O-PHOSPHONO -D-RIBITOL HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION HETSYN 4LS DIMETHYLALLYL FMN FORMUL 2 4LS C22 H31 N4 O9 P FORMUL 3 NA NA 1+ FORMUL 4 PO4 O4 P 3- FORMUL 5 HOH *185(H2 O) HELIX 1 AA1 GLY A 16 GLU A 30 1 15 HELIX 2 AA2 SER A 39 THR A 50 1 12 HELIX 3 AA3 LYS A 57 GLY A 70 1 14 HELIX 4 AA4 ALA A 86 SER A 90 5 5 HELIX 5 AA5 SER A 104 GLY A 114 1 11 HELIX 6 AA6 ASN A 118 GLU A 130 1 13 HELIX 7 AA7 SER A 144 LEU A 157 1 14 HELIX 8 AA8 SER A 174 GLY A 191 1 18 SHEET 1 AA1 6 ILE A 76 VAL A 78 0 SHEET 2 AA1 6 GLU A 33 ILE A 38 1 N PHE A 36 O ARG A 77 SHEET 3 AA1 6 ARG A 6 MET A 11 1 N LEU A 9 O LEU A 37 SHEET 4 AA1 6 ALA A 97 CYS A 103 1 O ALA A 97 N THR A 8 SHEET 5 AA1 6 LEU A 134 PRO A 138 1 O VAL A 135 N ILE A 100 SHEET 6 AA1 6 VAL A 160 ILE A 161 1 O VAL A 160 N LEU A 134 LINK OD1 ASN A 117 NA NA A 302 1555 1555 2.00 LINK NA NA A 302 O HOH A 407 1555 1555 2.51 LINK NA NA A 302 O HOH A 444 1555 18544 2.46 LINK NA NA A 302 O HOH A 472 1555 18544 2.25 LINK NA NA A 302 O HOH A 482 1555 1555 2.45 LINK NA NA A 302 O HOH A 491 1555 18544 2.55 CISPEP 1 CYS A 101 PRO A 102 0 -6.88 CISPEP 2 ALA A 141 PRO A 142 0 -12.88 SITE 1 AC1 24 THR A 12 GLY A 13 ALA A 14 SER A 15 SITE 2 AC1 24 SER A 39 ALA A 41 LEU A 44 TRP A 84 SITE 3 AC1 24 ALA A 89 SER A 90 SER A 104 THR A 105 SITE 4 AC1 24 THR A 107 CYS A 116 ARG A 122 ARG A 139 SITE 5 AC1 24 TYR A 169 TRP A 200 PO4 A 303 HOH A 401 SITE 6 AC1 24 HOH A 425 HOH A 426 HOH A 444 HOH A 451 SITE 1 AC2 6 ASN A 117 HOH A 407 HOH A 444 HOH A 472 SITE 2 AC2 6 HOH A 482 HOH A 491 SITE 1 AC3 10 SER A 90 GLY A 91 ARG A 122 LYS A 129 SITE 2 AC3 10 ARG A 139 GLU A 140 TYR A 169 ARG A 185 SITE 3 AC3 10 4LS A 301 HOH A 408 CRYST1 141.887 141.887 141.887 90.00 90.00 90.00 F 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007048 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007048 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007048 0.00000