HEADER PROTEIN BINDING 07-FEB-19 6QMK TITLE SMALL MOLECULE INHIBITOR OF THE KEAP1-NRF2 PROTEIN-PROTEIN INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH-LIKE ECH-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOSOLIC INHIBITOR OF NRF2,INRF2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KEAP1, INRF2, KIAA0132; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN UBIQUITINATION, OXIDATIVE STRESS, KELCH MOTIF, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR T.G.DAVIES REVDAT 2 22-MAY-19 6QMK 1 JRNL REVDAT 1 24-APR-19 6QMK 0 JRNL AUTH T.D.HEIGHTMAN,J.F.CALLAHAN,E.CHIARPARIN,J.E.COYLE, JRNL AUTH 2 C.GRIFFITHS-JONES,A.S.LAKDAWALA,R.MCMENAMIN,P.N.MORTENSON, JRNL AUTH 3 D.NORTON,T.M.PEAKMAN,S.J.RICH,C.RICHARDSON,W.L.RUMSEY, JRNL AUTH 4 Y.SANCHEZ,G.SAXTY,H.M.G.WILLEMS,L.WOLFE 3RD,A.J.WOOLFORD, JRNL AUTH 5 Z.WU,H.YAN,J.K.KERNS,T.G.DAVIES JRNL TITL STRUCTURE-ACTIVITY AND STRUCTURE-CONFORMATION RELATIONSHIPS JRNL TITL 2 OF ARYL PROPIONIC ACID INHIBITORS OF THE KELCH-LIKE JRNL TITL 3 ECH-ASSOCIATED PROTEIN 1/NUCLEAR FACTOR ERYTHROID 2-RELATED JRNL TITL 4 FACTOR 2 (KEAP1/NRF2) PROTEIN-PROTEIN INTERACTION. JRNL REF J.MED.CHEM. V. 62 4683 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 30973731 JRNL DOI 10.1021/ACS.JMEDCHEM.9B00279 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 34183 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2016 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 107 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2226 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : -0.31000 REMARK 3 B33 (A**2) : 1.00000 REMARK 3 B12 (A**2) : -0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.980 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2328 ; 0.009 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 1945 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3176 ; 1.374 ; 1.747 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4556 ; 0.506 ; 1.720 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 7.697 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;25.882 ;19.441 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;10.736 ;15.096 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;21.798 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2707 ; 0.001 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 451 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1161 ; 1.427 ; 2.903 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1162 ; 1.430 ; 2.908 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1167 ; 2.697 ; 3.611 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1168 ; 2.695 ; 3.611 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2514 ; 5.917 ;16.674 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2482 ; 5.774 ;16.111 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 324 A 613 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8441 61.6611 38.0697 REMARK 3 T TENSOR REMARK 3 T11: 0.0309 T22: 0.0086 REMARK 3 T33: 0.0463 T12: 0.0079 REMARK 3 T13: -0.0168 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 2.2536 L22: 2.7261 REMARK 3 L33: 1.0696 L12: -0.2194 REMARK 3 L13: -0.4886 L23: 0.4612 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: -0.0343 S13: -0.0659 REMARK 3 S21: 0.1804 S22: 0.0538 S23: 0.1011 REMARK 3 S31: 0.0567 S32: 0.0488 S33: 0.0027 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 1M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37059 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 89.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3M (NH4)2SO4 1M LI2SO4 0.1M PH=5.6 REMARK 280 NA3 CITRATE/HCL, PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.78633 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.57267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.17950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.96583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.39317 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 304 REMARK 465 GLY A 305 REMARK 465 SER A 306 REMARK 465 SER A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 465 GLY A 316 REMARK 465 LEU A 317 REMARK 465 VAL A 318 REMARK 465 PRO A 319 REMARK 465 ARG A 320 REMARK 465 GLY A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 ARG A 614 REMARK 465 LYS A 615 REMARK 465 GLN A 616 REMARK 465 ILE A 617 REMARK 465 ASP A 618 REMARK 465 GLN A 619 REMARK 465 GLN A 620 REMARK 465 ASN A 621 REMARK 465 CYS A 622 REMARK 465 THR A 623 REMARK 465 CYS A 624 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 336 -43.50 73.56 REMARK 500 VAL A 453 -169.91 -118.91 REMARK 500 THR A 481 -50.23 -122.78 REMARK 500 HIS A 516 -128.27 57.39 REMARK 500 VAL A 547 -167.88 -113.21 REMARK 500 HIS A 575 -45.00 -144.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 380 0.08 SIDE CHAIN REMARK 500 ARG A 442 0.13 SIDE CHAIN REMARK 500 ARG A 470 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1154 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A1155 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1156 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A1157 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A1158 DISTANCE = 6.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue J8H A 702 DBREF 6QMK A 322 624 UNP Q9Z2X8 KEAP1_MOUSE 322 624 SEQADV 6QMK MET A 304 UNP Q9Z2X8 INITIATING METHIONINE SEQADV 6QMK GLY A 305 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK SER A 306 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK SER A 307 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 308 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 309 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 310 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 311 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 312 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK HIS A 313 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK SER A 314 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK SER A 315 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK GLY A 316 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK LEU A 317 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK VAL A 318 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK PRO A 319 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK ARG A 320 UNP Q9Z2X8 EXPRESSION TAG SEQADV 6QMK GLY A 321 UNP Q9Z2X8 EXPRESSION TAG SEQRES 1 A 321 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 321 LEU VAL PRO ARG GLY PRO LYS VAL GLY ARG LEU ILE TYR SEQRES 3 A 321 THR ALA GLY GLY TYR PHE ARG GLN SER LEU SER TYR LEU SEQRES 4 A 321 GLU ALA TYR ASN PRO SER ASN GLY SER TRP LEU ARG LEU SEQRES 5 A 321 ALA ASP LEU GLN VAL PRO ARG SER GLY LEU ALA GLY CYS SEQRES 6 A 321 VAL VAL GLY GLY LEU LEU TYR ALA VAL GLY GLY ARG ASN SEQRES 7 A 321 ASN SER PRO ASP GLY ASN THR ASP SER SER ALA LEU ASP SEQRES 8 A 321 CYS TYR ASN PRO MET THR ASN GLN TRP SER PRO CYS ALA SEQRES 9 A 321 SER MET SER VAL PRO ARG ASN ARG ILE GLY VAL GLY VAL SEQRES 10 A 321 ILE ASP GLY HIS ILE TYR ALA VAL GLY GLY SER HIS GLY SEQRES 11 A 321 CYS ILE HIS HIS SER SER VAL GLU ARG TYR GLU PRO GLU SEQRES 12 A 321 ARG ASP GLU TRP HIS LEU VAL ALA PRO MET LEU THR ARG SEQRES 13 A 321 ARG ILE GLY VAL GLY VAL ALA VAL LEU ASN ARG LEU LEU SEQRES 14 A 321 TYR ALA VAL GLY GLY PHE ASP GLY THR ASN ARG LEU ASN SEQRES 15 A 321 SER ALA GLU CYS TYR TYR PRO GLU ARG ASN GLU TRP ARG SEQRES 16 A 321 MET ILE THR PRO MET ASN THR ILE ARG SER GLY ALA GLY SEQRES 17 A 321 VAL CYS VAL LEU HIS ASN CYS ILE TYR ALA ALA GLY GLY SEQRES 18 A 321 TYR ASP GLY GLN ASP GLN LEU ASN SER VAL GLU ARG TYR SEQRES 19 A 321 ASP VAL GLU THR GLU THR TRP THR PHE VAL ALA PRO MET SEQRES 20 A 321 ARG HIS HIS ARG SER ALA LEU GLY ILE THR VAL HIS GLN SEQRES 21 A 321 GLY LYS ILE TYR VAL LEU GLY GLY TYR ASP GLY HIS THR SEQRES 22 A 321 PHE LEU ASP SER VAL GLU CYS TYR ASP PRO ASP SER ASP SEQRES 23 A 321 THR TRP SER GLU VAL THR ARG MET THR SER GLY ARG SER SEQRES 24 A 321 GLY VAL GLY VAL ALA VAL THR MET GLU PRO CYS ARG LYS SEQRES 25 A 321 GLN ILE ASP GLN GLN ASN CYS THR CYS HET CL A 701 1 HET J8H A 702 65 HETNAM CL CHLORIDE ION HETNAM J8H (3~{S})-3-[3-[[1,1-BIS(OXIDANYLIDENE)-3,4-DIHYDRO-5, HETNAM 2 J8H 1$L^{6},2-BENZOXATHIAZEPIN-2-YL]METHYL]-4-METHYL- HETNAM 3 J8H PHENYL]-3-(7-METHOXY-1-METHYL-BENZOTRIAZOL-5-YL) HETNAM 4 J8H PROPANOIC ACID FORMUL 2 CL CL 1- FORMUL 3 J8H C27 H28 N4 O6 S FORMUL 4 HOH *358(H2 O) HELIX 1 AA1 PRO A 492 ASN A 495 5 4 SHEET 1 AA1 4 TRP A 352 ARG A 354 0 SHEET 2 AA1 4 LEU A 342 TYR A 345 -1 N ALA A 344 O LEU A 353 SHEET 3 AA1 4 ARG A 326 ALA A 331 -1 N THR A 330 O GLU A 343 SHEET 4 AA1 4 GLY A 605 MET A 610 -1 O ALA A 607 N TYR A 329 SHEET 1 AA2 4 ALA A 366 VAL A 370 0 SHEET 2 AA2 4 LEU A 373 VAL A 377 -1 O TYR A 375 N CYS A 368 SHEET 3 AA2 4 LEU A 393 TYR A 396 -1 O TYR A 396 N LEU A 374 SHEET 4 AA2 4 TRP A 403 PRO A 405 -1 O SER A 404 N CYS A 395 SHEET 1 AA3 2 ARG A 380 SER A 383 0 SHEET 2 AA3 2 GLY A 386 ASP A 389 -1 O GLY A 386 N SER A 383 SHEET 1 AA4 4 GLY A 417 ILE A 421 0 SHEET 2 AA4 4 HIS A 424 VAL A 428 -1 O TYR A 426 N GLY A 419 SHEET 3 AA4 4 VAL A 440 TYR A 443 -1 O TYR A 443 N ILE A 425 SHEET 4 AA4 4 TRP A 450 LEU A 452 -1 O HIS A 451 N ARG A 442 SHEET 1 AA5 2 SER A 431 HIS A 432 0 SHEET 2 AA5 2 ILE A 435 HIS A 436 -1 O ILE A 435 N HIS A 432 SHEET 1 AA6 4 GLY A 464 LEU A 468 0 SHEET 2 AA6 4 LEU A 471 VAL A 475 -1 O TYR A 473 N ALA A 466 SHEET 3 AA6 4 ALA A 487 TYR A 490 -1 O TYR A 490 N LEU A 472 SHEET 4 AA6 4 TRP A 497 ILE A 500 -1 O ARG A 498 N CYS A 489 SHEET 1 AA7 4 GLY A 511 LEU A 515 0 SHEET 2 AA7 4 CYS A 518 ALA A 522 -1 O TYR A 520 N CYS A 513 SHEET 3 AA7 4 VAL A 534 ASP A 538 -1 O GLU A 535 N ALA A 521 SHEET 4 AA7 4 THR A 543 PHE A 546 -1 O THR A 545 N ARG A 536 SHEET 1 AA8 4 GLY A 558 HIS A 562 0 SHEET 2 AA8 4 LYS A 565 LEU A 569 -1 O TYR A 567 N THR A 560 SHEET 3 AA8 4 SER A 580 ASP A 585 -1 O GLU A 582 N VAL A 568 SHEET 4 AA8 4 THR A 590 ARG A 596 -1 O VAL A 594 N VAL A 581 SITE 1 AC1 2 ASN A 414 HOH A1046 SITE 1 AC2 17 TYR A 334 SER A 363 GLY A 364 ASN A 382 SITE 2 AC2 17 ARG A 415 PHE A 478 ARG A 483 SER A 508 SITE 3 AC2 17 GLY A 509 TYR A 525 GLN A 530 SER A 555 SITE 4 AC2 17 ALA A 556 TYR A 572 SER A 602 GLY A 603 SITE 5 AC2 17 HOH A 826 CRYST1 103.651 103.651 56.359 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009648 0.005570 0.000000 0.00000 SCALE2 0.000000 0.011140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017743 0.00000