HEADER TRANSCRIPTION 08-FEB-19 6QMS TITLE NF-YB/C HETERODIMER IN COMPLEX WITH NF-YA-DERIVED PEPTIDE STABILIZED TITLE 2 WITH C11-HYDROCARBON LINKER COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT A,NUCLEAR TRANSCRIPTION COMPND 5 FACTOR Y SUBUNIT A,NF-YA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT B,NUCLEAR TRANSCRIPTION COMPND 11 FACTOR Y SUBUNIT B,NF-YB; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT C,NUCLEAR TRANSCRIPTION COMPND 17 FACTOR Y SUBUNIT C,NF-YC,TRANSACTIVATOR HSM-1/2; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: NFYB, HAP3; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: NFYC; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS STAPLED PEPTIDE HISTONE FOLD TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.KIEHSTALLER,S.JEGANATHAN,N.M.PEARCE,M.WENDT,T.N.GROSSMANN,S.HENNIG REVDAT 5 24-JAN-24 6QMS 1 LINK REVDAT 4 20-JUL-22 6QMS 1 COMPND SOURCE AUTHOR REMARK REVDAT 4 2 1 DBREF SEQADV SEQRES HET REVDAT 4 3 1 HETNAM FORMUL HELIX SHEET REVDAT 4 4 1 LINK SCALE ATOM REVDAT 3 27-NOV-19 6QMS 1 JRNL REVDAT 2 30-OCT-19 6QMS 1 JRNL REVDAT 1 02-OCT-19 6QMS 0 JRNL AUTH S.JEGANATHAN,M.WENDT,S.KIEHSTALLER,D.BRANCACCIO,A.KUEPPER, JRNL AUTH 2 N.POSPIECH,A.CAROTENUTO,E.NOVELLINO,S.HENNIG,T.N.GROSSMANN JRNL TITL CONSTRAINED PEPTIDES WITH FINE-TUNED FLEXIBILITY INHIBIT JRNL TITL 2 NF-Y TRANSCRIPTION FACTOR ASSEMBLY. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 58 17351 2019 JRNL REFN ESSN 1521-3773 JRNL PMID 31539186 JRNL DOI 10.1002/ANIE.201907901 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 16497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 868 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1196 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.3660 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.070 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1556 ; 0.008 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 1572 ; 0.001 ; 0.019 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2095 ; 1.251 ; 1.895 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3616 ; 1.066 ; 2.698 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 184 ; 4.874 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;28.350 ;21.221 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 305 ;13.775 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;11.960 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 237 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1728 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 360 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8000 12.1850 34.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.0522 T22: 0.1895 REMARK 3 T33: 0.2290 T12: -0.0537 REMARK 3 T13: -0.0149 T23: -0.1143 REMARK 3 L TENSOR REMARK 3 L11: 8.8791 L22: 5.6409 REMARK 3 L33: 8.4317 L12: 0.8041 REMARK 3 L13: 0.2031 L23: -3.4524 REMARK 3 S TENSOR REMARK 3 S11: 0.0196 S12: -0.1718 S13: 0.0212 REMARK 3 S21: 0.1113 S22: -0.2516 S23: -0.2243 REMARK 3 S31: 0.1289 S32: 0.3737 S33: 0.2321 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 57 B 143 REMARK 3 ORIGIN FOR THE GROUP (A): 1.6840 5.6000 23.8140 REMARK 3 T TENSOR REMARK 3 T11: 0.0257 T22: 0.0200 REMARK 3 T33: 0.1816 T12: -0.0026 REMARK 3 T13: -0.0229 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 3.2260 L22: 3.0113 REMARK 3 L33: 6.3674 L12: -0.8421 REMARK 3 L13: -1.7401 L23: -0.5656 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.0988 S13: -0.0068 REMARK 3 S21: -0.2667 S22: 0.0162 S23: 0.1083 REMARK 3 S31: 0.1119 S32: -0.1607 S33: -0.1093 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 41 C 120 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5350 7.5280 19.7060 REMARK 3 T TENSOR REMARK 3 T11: 0.0593 T22: 0.0641 REMARK 3 T33: 0.2041 T12: 0.0463 REMARK 3 T13: 0.0210 T23: -0.0409 REMARK 3 L TENSOR REMARK 3 L11: 3.1109 L22: 4.5229 REMARK 3 L33: 5.2643 L12: -0.0107 REMARK 3 L13: -1.1525 L23: -2.5609 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: 0.0939 S13: 0.1565 REMARK 3 S21: -0.3047 S22: -0.1002 S23: -0.3718 REMARK 3 S31: 0.3713 S32: 0.3235 S33: 0.1032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6QMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977970 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17408 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CSR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH8.5 0.2 M MGCL2 18% REMARK 280 PEG8000, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.47500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.25000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.25000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.47500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 284 REMARK 465 LEU A 285 REMARK 465 NH2 A 286 REMARK 465 GLY B 49 REMARK 465 PRO B 50 REMARK 465 SER B 51 REMARK 465 PHE B 52 REMARK 465 ARG B 53 REMARK 465 GLU B 54 REMARK 465 GLN B 55 REMARK 465 ASP B 56 REMARK 465 GLY C 25 REMARK 465 PRO C 26 REMARK 465 MET C 27 REMARK 465 GLU C 28 REMARK 465 GLU C 29 REMARK 465 ILE C 30 REMARK 465 ARG C 31 REMARK 465 ASN C 32 REMARK 465 LEU C 33 REMARK 465 THR C 34 REMARK 465 VAL C 35 REMARK 465 LYS C 36 REMARK 465 ASP C 37 REMARK 465 PHE C 38 REMARK 465 ARG C 39 REMARK 465 VAL C 40 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG C 120 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 282 69.18 -68.55 REMARK 500 PHE B 127 47.29 -101.86 REMARK 500 PHE B 141 -177.80 -61.75 REMARK 500 ARG B 142 -26.19 64.86 REMARK 500 GLU C 42 137.14 172.16 REMARK 500 LYS C 59 -77.15 -104.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 6QMS A 267 285 UNP P23511 NFYA_HUMAN 267 285 DBREF 6QMS B 51 143 UNP P25208 NFYB_HUMAN 51 143 DBREF 6QMS C 27 120 UNP Q13952 NFYC_HUMAN 27 120 SEQADV 6QMS ACE A 266 UNP P23511 ACETYLATION SEQADV 6QMS L4R A 273 UNP P23511 HIS 273 ENGINEERED MUTATION SEQADV 6QMS MH8 A 280 UNP P23511 GLN 280 ENGINEERED MUTATION SEQADV 6QMS NH2 A 286 UNP P23511 AMIDATION SEQADV 6QMS GLY B 49 UNP P25208 EXPRESSION TAG SEQADV 6QMS PRO B 50 UNP P25208 EXPRESSION TAG SEQADV 6QMS GLY C 25 UNP Q13952 EXPRESSION TAG SEQADV 6QMS PRO C 26 UNP Q13952 EXPRESSION TAG SEQRES 1 A 21 ACE VAL ASN ALA LYS GLN TYR L4R ARG ILE LEU LYS ARG SEQRES 2 A 21 ARG MH8 ALA ARG ALA LYS LEU NH2 SEQRES 1 B 95 GLY PRO SER PHE ARG GLU GLN ASP ILE TYR LEU PRO ILE SEQRES 2 B 95 ALA ASN VAL ALA ARG ILE MET LYS ASN ALA ILE PRO GLN SEQRES 3 B 95 THR GLY LYS ILE ALA LYS ASP ALA LYS GLU CYS VAL GLN SEQRES 4 B 95 GLU CYS VAL SER GLU PHE ILE SER PHE ILE THR SER GLU SEQRES 5 B 95 ALA SER GLU ARG CYS HIS GLN GLU LYS ARG LYS THR ILE SEQRES 6 B 95 ASN GLY GLU ASP ILE LEU PHE ALA MET SER THR LEU GLY SEQRES 7 B 95 PHE ASP SER TYR VAL GLU PRO LEU LYS LEU TYR LEU GLN SEQRES 8 B 95 LYS PHE ARG GLU SEQRES 1 C 96 GLY PRO MET GLU GLU ILE ARG ASN LEU THR VAL LYS ASP SEQRES 2 C 96 PHE ARG VAL GLN GLU LEU PRO LEU ALA ARG ILE LYS LYS SEQRES 3 C 96 ILE MET LYS LEU ASP GLU ASP VAL LYS MET ILE SER ALA SEQRES 4 C 96 GLU ALA PRO VAL LEU PHE ALA LYS ALA ALA GLN ILE PHE SEQRES 5 C 96 ILE THR GLU LEU THR LEU ARG ALA TRP ILE HIS THR GLU SEQRES 6 C 96 ASP ASN LYS ARG ARG THR LEU GLN ARG ASN ASP ILE ALA SEQRES 7 C 96 MET ALA ILE THR LYS PHE ASP GLN PHE ASP PHE LEU ILE SEQRES 8 C 96 ASP ILE VAL PRO ARG HET ACE A 266 3 HET L4R A 273 11 HET MH8 A 280 10 HETNAM ACE ACETYL GROUP HETNAM L4R FMOC-(R)-2-(7-OCTENYL)ALANINE HETNAM MH8 (2S)-2-AMINO-2-METHYLHEPT-6-ENOIC ACID FORMUL 1 ACE C2 H4 O FORMUL 1 L4R C11 H21 N O2 FORMUL 1 MH8 C8 H15 N O2 FORMUL 4 HOH *54(H2 O) HELIX 1 AA1 GLN A 271 ARG A 282 1 12 HELIX 2 AA2 PRO B 60 ILE B 72 1 13 HELIX 3 AA3 ALA B 79 GLU B 108 1 30 HELIX 4 AA4 ASN B 114 LEU B 125 1 12 HELIX 5 AA5 PHE B 127 SER B 129 5 3 HELIX 6 AA6 TYR B 130 PHE B 141 1 12 HELIX 7 AA7 PRO C 44 LEU C 54 1 11 HELIX 8 AA8 ALA C 63 ASN C 91 1 29 HELIX 9 AA9 GLN C 97 THR C 106 1 10 HELIX 10 AB1 LYS C 107 ILE C 115 5 9 SHEET 1 AA1 2 LYS B 77 ILE B 78 0 SHEET 2 AA1 2 THR C 95 LEU C 96 1 O LEU C 96 N LYS B 77 SHEET 1 AA2 2 THR B 112 ILE B 113 0 SHEET 2 AA2 2 MET C 60 ILE C 61 1 O MET C 60 N ILE B 113 LINK C ACE A 266 N VAL A 267 1555 1555 1.33 LINK C TYR A 272 N L4R A 273 1555 1555 1.34 LINK C L4R A 273 N ARG A 274 1555 1555 1.34 LINK CH L4R A 273 CZ MH8 A 280 1555 1555 1.49 LINK C ARG A 279 N MH8 A 280 1555 1555 1.34 LINK C MH8 A 280 N ALA A 281 1555 1555 1.34 CRYST1 48.950 49.760 74.500 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020429 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013423 0.00000 HETATM 1 C ACE A 266 15.192 24.217 30.359 1.00 58.53 C HETATM 2 O ACE A 266 15.578 25.321 30.577 1.00 72.44 O HETATM 3 CH3 ACE A 266 14.798 23.806 28.951 1.00 72.45 C