HEADER RNA BINDING PROTEIN 13-FEB-19 6QP0 TITLE CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM KTI12 IN COMPLEX WITH TITLE 2 ADP-ALF3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CHROMATIN BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G0SHI1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM; SOURCE 3 ORGANISM_TAXID: 209285; SOURCE 4 GENE: CTHT_0070100; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ELONGATOR, TRNA, TRNA MODIFICATION, MCM5, CM5, NCM5. ELONGATOR KEYWDS 2 REGULATORY PROTEIN, ELONGATOR REGULATION. #ELONGATOR, RNA BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.KRUTYHOLOWA,S.GLATT REVDAT 4 22-MAY-19 6QP0 1 JRNL REVDAT 3 10-APR-19 6QP0 1 JRNL REVDAT 2 20-MAR-19 6QP0 1 REMARK REVDAT 1 13-MAR-19 6QP0 0 JRNL AUTH R.KRUTYHOLOWA,A.HAMMERMEISTER,R.ZABEL,W.ABDEL-FATTAH, JRNL AUTH 2 A.REINHARDT-TEWS,M.HELM,M.J.R.STARK,K.D.BREUNIG, JRNL AUTH 3 R.SCHAFFRATH,S.GLATT JRNL TITL KTI12, A PSTK-LIKE TRNA DEPENDENT ATPASE ESSENTIAL FOR TRNA JRNL TITL 2 MODIFICATION BY ELONGATOR. JRNL REF NUCLEIC ACIDS RES. V. 47 4814 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30916349 JRNL DOI 10.1093/NAR/GKZ190 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 10300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5138 - 3.8235 1.00 2559 135 0.2026 0.2371 REMARK 3 2 3.8235 - 3.0354 1.00 2446 127 0.2263 0.2475 REMARK 3 3 3.0354 - 2.6518 0.99 2413 128 0.2960 0.3648 REMARK 3 4 2.6518 - 2.4094 0.98 2368 124 0.3263 0.3486 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1600 REMARK 3 ANGLE : 0.619 2169 REMARK 3 CHIRALITY : 0.038 230 REMARK 3 PLANARITY : 0.003 273 REMARK 3 DIHEDRAL : 15.699 962 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4812 34.8858 43.5481 REMARK 3 T TENSOR REMARK 3 T11: 0.4769 T22: 0.5871 REMARK 3 T33: 0.1971 T12: -0.0897 REMARK 3 T13: 0.0177 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.0177 L22: 3.7126 REMARK 3 L33: 2.2997 L12: -1.0701 REMARK 3 L13: 0.7360 L23: -1.2415 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: -0.6266 S13: -0.1091 REMARK 3 S21: 0.1217 S22: 0.3048 S23: 0.5040 REMARK 3 S31: -0.0568 S32: -0.8079 S33: -0.1881 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3317 35.8540 43.6164 REMARK 3 T TENSOR REMARK 3 T11: 0.5097 T22: 1.1332 REMARK 3 T33: 0.3295 T12: -0.4097 REMARK 3 T13: 0.0689 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.4930 L22: 1.0999 REMARK 3 L33: 1.5763 L12: 0.4632 REMARK 3 L13: -0.0186 L23: -0.6092 REMARK 3 S TENSOR REMARK 3 S11: -0.0247 S12: -0.8069 S13: -0.0111 REMARK 3 S21: 0.0915 S22: 0.0720 S23: 0.2022 REMARK 3 S31: 0.3290 S32: -0.9696 S33: -0.6441 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5292 39.2458 35.0942 REMARK 3 T TENSOR REMARK 3 T11: 0.4238 T22: 0.4821 REMARK 3 T33: 0.1838 T12: -0.0486 REMARK 3 T13: 0.0356 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.4766 L22: 0.6201 REMARK 3 L33: 4.0742 L12: 0.1825 REMARK 3 L13: 0.5542 L23: 0.4128 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: -0.1181 S13: 0.1454 REMARK 3 S21: -0.0938 S22: -0.0386 S23: 0.0009 REMARK 3 S31: 0.0253 S32: -0.0753 S33: -0.0876 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5090 17.4844 47.0043 REMARK 3 T TENSOR REMARK 3 T11: 1.0815 T22: 0.6420 REMARK 3 T33: 0.4395 T12: -0.0902 REMARK 3 T13: -0.1687 T23: 0.1938 REMARK 3 L TENSOR REMARK 3 L11: 4.1977 L22: 0.2888 REMARK 3 L33: 9.4573 L12: -1.0963 REMARK 3 L13: -0.8534 L23: 0.2562 REMARK 3 S TENSOR REMARK 3 S11: -0.0913 S12: -0.5276 S13: -0.9905 REMARK 3 S21: -0.0028 S22: -0.0985 S23: -0.2453 REMARK 3 S31: 1.4430 S32: -0.7801 S33: 0.2822 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2508 29.7493 42.8473 REMARK 3 T TENSOR REMARK 3 T11: 0.5481 T22: 0.4843 REMARK 3 T33: 0.2529 T12: 0.0439 REMARK 3 T13: -0.0074 T23: 0.0724 REMARK 3 L TENSOR REMARK 3 L11: 1.7176 L22: 1.6912 REMARK 3 L33: 5.9453 L12: 0.4284 REMARK 3 L13: 0.6974 L23: 2.0930 REMARK 3 S TENSOR REMARK 3 S11: 0.1640 S12: -0.0668 S13: -0.2988 REMARK 3 S21: 0.4524 S22: -0.0344 S23: -0.1938 REMARK 3 S31: 0.9741 S32: 0.4257 S33: -0.1666 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8033 33.1108 53.9797 REMARK 3 T TENSOR REMARK 3 T11: 0.8195 T22: 0.8731 REMARK 3 T33: 0.2515 T12: -0.2228 REMARK 3 T13: -0.0507 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 1.6870 L22: 3.8564 REMARK 3 L33: 5.4457 L12: 0.9990 REMARK 3 L13: -0.6113 L23: -1.2733 REMARK 3 S TENSOR REMARK 3 S11: 0.0946 S12: -0.4491 S13: -0.4473 REMARK 3 S21: -0.0219 S22: -0.1571 S23: 0.1813 REMARK 3 S31: 1.4510 S32: -1.0390 S33: -0.0081 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7902 42.0737 51.3289 REMARK 3 T TENSOR REMARK 3 T11: 0.5069 T22: 1.3436 REMARK 3 T33: 0.2971 T12: -0.0319 REMARK 3 T13: 0.0723 T23: -0.0898 REMARK 3 L TENSOR REMARK 3 L11: 1.9822 L22: 3.8901 REMARK 3 L33: 6.9522 L12: 2.5070 REMARK 3 L13: -2.6496 L23: -4.9063 REMARK 3 S TENSOR REMARK 3 S11: 0.1015 S12: -0.7533 S13: 0.1514 REMARK 3 S21: 0.8665 S22: 0.4886 S23: 0.7303 REMARK 3 S31: -1.0520 S32: -1.2760 S33: -0.5545 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.982 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10334 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15000 REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER, SHELXS, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3 MM ADP, 6 MM ALCL3 AND 60 MM NAF; REMARK 280 PROTEIN CONCENTRATION = 45 MG/ML; 3 DAYS; MOTHER LIQUOR REMARK 280 CONTAINED 100 MM MMT BUFFER (DL-MALIC ACID, MES MONOHYDRATE, REMARK 280 TRIS AT PH 5.5) AND 25% W/V PEG1500., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.52333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.04667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 59.04667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.52333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLN A 32 REMARK 465 PRO A 33 REMARK 465 LYS A 34 REMARK 465 SER A 35 REMARK 465 GLN A 36 REMARK 465 MET A 37 REMARK 465 PRO A 38 REMARK 465 SER A 39 REMARK 465 GLN A 40 REMARK 465 PRO A 41 REMARK 465 GLN A 42 REMARK 465 PRO A 43 REMARK 465 GLN A 44 REMARK 465 HIS A 45 REMARK 465 PRO A 46 REMARK 465 PRO A 47 REMARK 465 GLN A 48 REMARK 465 SER A 49 REMARK 465 GLN A 50 REMARK 465 PRO A 51 REMARK 465 PRO A 52 REMARK 465 SER A 53 REMARK 465 GLN A 54 REMARK 465 SER A 55 REMARK 465 GLN A 56 REMARK 465 THR A 57 REMARK 465 SER A 58 REMARK 465 PRO A 59 REMARK 465 ILE A 60 REMARK 465 PRO A 61 REMARK 465 PRO A 62 REMARK 465 PRO A 63 REMARK 465 LEU A 64 REMARK 465 SER A 65 REMARK 465 SER A 66 REMARK 465 THR A 67 REMARK 465 PRO A 68 REMARK 465 LEU A 89 REMARK 465 SER A 90 REMARK 465 PRO A 91 REMARK 465 GLU A 92 REMARK 465 LYS A 93 REMARK 465 LEU A 94 REMARK 465 PRO A 95 REMARK 465 GLU A 176 REMARK 465 ARG A 177 REMARK 465 LYS A 178 REMARK 465 LEU A 179 REMARK 465 LYS A 180 REMARK 465 GLU A 181 REMARK 465 GLN A 182 REMARK 465 GLY A 183 REMARK 465 GLU A 184 REMARK 465 LYS A 185 REMARK 465 LYS A 186 REMARK 465 GLU A 187 REMARK 465 GLY A 188 REMARK 465 GLU A 189 REMARK 465 GLU A 190 REMARK 465 LYS A 191 REMARK 465 LYS A 192 REMARK 465 GLU A 193 REMARK 465 ALA A 194 REMARK 465 GLU A 253 REMARK 465 GLY A 254 REMARK 465 LEU A 255 REMARK 465 GLU A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 99 NE CZ NH1 NH2 REMARK 470 LYS A 123 CD CE NZ REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 LYS A 163 CD CE NZ REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 ARG A 170 CD NE CZ REMARK 470 ARG A 174 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2B ADP A 501 F3 AF3 A 502 2.05 REMARK 500 O HOH A 942 O HOH A 943 2.09 REMARK 500 OE1 GLN A 140 O HOH A 901 2.09 REMARK 500 O HOH A 918 O HOH A 933 2.17 REMARK 500 O HOH A 901 O HOH A 944 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 196 47.12 -85.09 REMARK 500 ILE A 250 34.26 -93.84 REMARK 500 ALA A 251 -167.82 -125.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 15 OG1 REMARK 620 2 ASP A 129 OD1 102.0 REMARK 620 3 ADP A 501 O1B 66.9 136.0 REMARK 620 4 HOH A 918 O 75.4 124.3 95.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AF3 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 504 DBREF 6QP0 A 2 254 UNP G0SHI1 G0SHI1_CHATD 2 254 SEQADV 6QP0 MET A 0 UNP G0SHI1 INITIATING METHIONINE SEQADV 6QP0 ALA A 1 UNP G0SHI1 CLONING ARTIFACT SEQADV 6QP0 LEU A 255 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 GLU A 256 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 257 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 258 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 259 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 260 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 261 UNP G0SHI1 EXPRESSION TAG SEQADV 6QP0 HIS A 262 UNP G0SHI1 EXPRESSION TAG SEQRES 1 A 263 MET ALA PRO LEU ILE VAL VAL THR GLY LEU PRO SER SER SEQRES 2 A 263 GLY LYS THR THR ARG ALA ARG GLN LEU TYR ALA TYR LEU SEQRES 3 A 263 GLU GLU ARG ILE ALA SER GLN PRO LYS SER GLN MET PRO SEQRES 4 A 263 SER GLN PRO GLN PRO GLN HIS PRO PRO GLN SER GLN PRO SEQRES 5 A 263 PRO SER GLN SER GLN THR SER PRO ILE PRO PRO PRO LEU SEQRES 6 A 263 SER SER THR PRO GLN TYR ARG LEU HIS TYR ILE SER ASP SEQRES 7 A 263 ALA THR LEU SER ILE SER ARG SER VAL TYR ASP LEU SER SEQRES 8 A 263 PRO GLU LYS LEU PRO ALA HIS VAL ARG SER ALA ASN ALA SEQRES 9 A 263 SER GLU LYS ASP ALA ARG ALA ALA LEU TYR ALA ALA VAL SEQRES 10 A 263 LYS ARG VAL LEU GLY PRO LYS ASP ILE VAL ILE LEU ASP SEQRES 11 A 263 SER LEU ASN TYR ILE LYS GLY TRP ARG TYR GLN LEU TYR SEQRES 12 A 263 CYS GLU ALA LYS ASN ALA ARG THR PRO SER CYS VAL LEU SEQRES 13 A 263 GLN VAL GLY GLY GLY VAL GLU LYS ALA ARG GLU VAL ASN SEQRES 14 A 263 GLU ARG ARG LEU GLU ARG ARG GLU ARG LYS LEU LYS GLU SEQRES 15 A 263 GLN GLY GLU LYS LYS GLU GLY GLU GLU LYS LYS GLU ALA SEQRES 16 A 263 ALA GLU SER ASP GLU GLU PRO TYR GLU ARG SER ASN TRP SEQRES 17 A 263 GLU ASN LEU VAL PHE ARG TYR GLU GLU PRO ASN PRO MET SEQRES 18 A 263 THR ARG TRP ASP SER PRO LEU PHE LEU LEU ALA TRP ASP SEQRES 19 A 263 ASP ASP GLU ALA GLN THR ARG GLN VAL PHE ASP LYS ILE SEQRES 20 A 263 TRP ASP ALA ILE ALA GLY GLU GLY LEU GLU HIS HIS HIS SEQRES 21 A 263 HIS HIS HIS HET ADP A 501 38 HET AF3 A 502 4 HET MG A 503 1 HET MES A 504 25 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM AF3 ALUMINUM FLUORIDE HETNAM MG MAGNESIUM ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 AF3 AL F3 FORMUL 4 MG MG 2+ FORMUL 5 MES C6 H13 N O4 S FORMUL 6 HOH *46(H2 O) HELIX 1 AA1 GLY A 13 SER A 31 1 19 HELIX 2 AA2 SER A 83 ASP A 88 5 6 HELIX 3 AA3 SER A 104 LEU A 120 1 17 HELIX 4 AA4 ILE A 134 ALA A 148 1 15 HELIX 5 AA5 GLY A 160 ARG A 174 1 15 HELIX 6 AA6 GLU A 203 ARG A 213 1 11 HELIX 7 AA7 ASP A 235 ILE A 250 1 16 SHEET 1 AA1 5 ARG A 71 SER A 76 0 SHEET 2 AA1 5 ASP A 124 ASP A 129 1 O ASP A 129 N ILE A 75 SHEET 3 AA1 5 LEU A 3 GLY A 8 1 N ILE A 4 O VAL A 126 SHEET 4 AA1 5 SER A 152 VAL A 157 1 O LEU A 155 N VAL A 5 SHEET 5 AA1 5 LEU A 227 LEU A 230 1 O PHE A 228 N GLN A 156 LINK OG1 THR A 15 MG MG A 503 1555 1555 2.02 LINK OD1 ASP A 129 MG MG A 503 1555 1555 2.87 LINK O1B ADP A 501 MG MG A 503 1555 1555 2.70 LINK MG MG A 503 O HOH A 918 1555 1555 2.31 CISPEP 1 SER A 225 PRO A 226 0 -3.66 SITE 1 AC1 11 SER A 11 GLY A 13 LYS A 14 THR A 15 SITE 2 AC1 11 THR A 16 VAL A 167 ARG A 171 ASP A 198 SITE 3 AC1 11 TRP A 232 AF3 A 502 MG A 503 SITE 1 AC2 10 SER A 11 LYS A 14 THR A 15 ARG A 84 SITE 2 AC2 10 ARG A 171 ASP A 198 TYR A 202 ADP A 501 SITE 3 AC2 10 MG A 503 HOH A 918 SITE 1 AC3 5 THR A 15 ASP A 129 ADP A 501 AF3 A 502 SITE 2 AC3 5 HOH A 918 SITE 1 AC4 11 VAL A 98 SER A 100 ALA A 101 SER A 104 SITE 2 AC4 11 ASP A 107 PRO A 219 MET A 220 THR A 221 SITE 3 AC4 11 ARG A 222 SER A 225 HOH A 920 CRYST1 71.020 71.020 88.570 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014081 0.008129 0.000000 0.00000 SCALE2 0.000000 0.016259 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011291 0.00000