HEADER CELL CYCLE 14-FEB-19 6QPL TITLE CRYSTAL STRUCTURE OF SPINDLIN1 IN COMPLEX WITH THE INHIBITOR MS31 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPINDLIN-1; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: OVARIAN CANCER-RELATED PROTEIN,SPINDLIN1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SPIN1, OCR, SPIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS EPIGENETICS, TUDOR DOMAIN, METHYL-LYSINE, METHYL-ARGININE, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR C.JOHANSSON,T.KROJER,Y.XIONG,J.JIN,C.H.ARROWSMITH,C.BOUNTRA, AUTHOR 2 A.EDWARDS,U.C.T.OPPERMANN REVDAT 3 24-JAN-24 6QPL 1 REMARK REVDAT 2 06-NOV-19 6QPL 1 JRNL REVDAT 1 17-JUL-19 6QPL 0 JRNL AUTH Y.XIONG,H.GRESCHIK,C.JOHANSSON,L.SEIFERT,J.BACHER,K.S.PARK, JRNL AUTH 2 N.BABAULT,M.MARTINI,V.FAGAN,F.LI,I.CHAU,T.CHRISTOTT, JRNL AUTH 3 D.DILWORTH,D.BARSYTE-LOVEJOY,M.VEDADI,C.H.ARROWSMITH, JRNL AUTH 4 P.BRENNAN,O.FEDOROV,M.JUNG,G.FARNIE,J.LIU,U.OPPERMANN, JRNL AUTH 5 R.SCHULE,J.JIN JRNL TITL DISCOVERY OF A POTENT AND SELECTIVE FRAGMENT-LIKE INHIBITOR JRNL TITL 2 OF METHYLLYSINE READER PROTEIN SPINDLIN 1 (SPIN1). JRNL REF J.MED.CHEM. V. 62 8996 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 31260300 JRNL DOI 10.1021/ACS.JMEDCHEM.9B00522 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.7867 - 3.8552 1.00 2868 159 0.1882 0.1995 REMARK 3 2 3.8552 - 3.0603 1.00 2736 150 0.1751 0.1805 REMARK 3 3 3.0603 - 2.6736 1.00 2698 138 0.1887 0.2210 REMARK 3 4 2.6736 - 2.4291 1.00 2675 137 0.1891 0.1642 REMARK 3 5 2.4291 - 2.2551 1.00 2676 143 0.1814 0.2177 REMARK 3 6 2.2551 - 2.1221 1.00 2664 134 0.1785 0.1916 REMARK 3 7 2.1221 - 2.0158 1.00 2643 130 0.1785 0.2125 REMARK 3 8 2.0158 - 1.9281 1.00 2643 139 0.1897 0.2446 REMARK 3 9 1.9281 - 1.8539 1.00 2613 129 0.1932 0.2255 REMARK 3 10 1.8539 - 1.7899 1.00 2672 115 0.2134 0.2523 REMARK 3 11 1.7899 - 1.7339 1.00 2612 131 0.2212 0.2455 REMARK 3 12 1.7339 - 1.6844 1.00 2613 127 0.2302 0.2746 REMARK 3 13 1.6844 - 1.6400 0.99 2643 130 0.2471 0.2858 REMARK 3 14 1.6400 - 1.6000 0.99 2617 137 0.2848 0.4066 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1670 REMARK 3 ANGLE : 0.867 2268 REMARK 3 CHIRALITY : 0.056 236 REMARK 3 PLANARITY : 0.006 302 REMARK 3 DIHEDRAL : 13.301 975 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7317 -46.4285 12.0837 REMARK 3 T TENSOR REMARK 3 T11: 0.1422 T22: 0.1473 REMARK 3 T33: 0.1947 T12: 0.0267 REMARK 3 T13: -0.0139 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 3.2610 L22: 3.1900 REMARK 3 L33: 2.9414 L12: 2.1202 REMARK 3 L13: 0.2180 L23: 1.3904 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.0016 S13: -0.1227 REMARK 3 S21: 0.0209 S22: -0.0337 S23: -0.0251 REMARK 3 S31: 0.0487 S32: -0.0565 S33: 0.0842 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4819 -39.5753 12.0280 REMARK 3 T TENSOR REMARK 3 T11: 0.1427 T22: 0.1627 REMARK 3 T33: 0.1999 T12: 0.0227 REMARK 3 T13: 0.0028 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.8295 L22: 3.5387 REMARK 3 L33: 1.3181 L12: -0.0516 REMARK 3 L13: 0.3502 L23: -0.3095 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: 0.0407 S13: 0.0160 REMARK 3 S21: -0.0251 S22: -0.0320 S23: -0.2474 REMARK 3 S31: 0.0374 S32: 0.0778 S33: 0.0455 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3077 -32.1005 -9.7075 REMARK 3 T TENSOR REMARK 3 T11: 0.2926 T22: 0.2775 REMARK 3 T33: 0.1848 T12: 0.0620 REMARK 3 T13: 0.0121 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 6.2155 L22: 7.3149 REMARK 3 L33: 8.7688 L12: 1.7623 REMARK 3 L13: 2.5013 L23: 1.0040 REMARK 3 S TENSOR REMARK 3 S11: 0.2118 S12: 0.3899 S13: -0.3762 REMARK 3 S21: -0.8014 S22: -0.2102 S23: 0.1614 REMARK 3 S31: 0.4334 S32: -0.3511 S33: -0.1122 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 148 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4139 -30.1111 -2.0696 REMARK 3 T TENSOR REMARK 3 T11: 0.1896 T22: 0.1316 REMARK 3 T33: 0.1755 T12: 0.0374 REMARK 3 T13: -0.0039 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.8655 L22: 2.2033 REMARK 3 L33: 6.4310 L12: -0.0467 REMARK 3 L13: -0.0138 L23: -0.4990 REMARK 3 S TENSOR REMARK 3 S11: 0.0877 S12: 0.1105 S13: -0.0134 REMARK 3 S21: -0.0564 S22: -0.0511 S23: -0.1751 REMARK 3 S31: -0.0135 S32: 0.1790 S33: -0.0232 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2672 -26.3412 10.3156 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.0740 REMARK 3 T33: 0.2219 T12: 0.0671 REMARK 3 T13: -0.0160 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 3.1563 L22: 0.9828 REMARK 3 L33: 4.0875 L12: -0.1244 REMARK 3 L13: -2.0039 L23: 0.7442 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.1407 S13: 0.0260 REMARK 3 S21: 0.0234 S22: 0.0215 S23: 0.0813 REMARK 3 S31: -0.0031 S32: -0.0431 S33: -0.1315 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 236 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6962 -25.5799 12.1814 REMARK 3 T TENSOR REMARK 3 T11: 0.1719 T22: 0.1892 REMARK 3 T33: 0.1587 T12: 0.0399 REMARK 3 T13: -0.0109 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 2.0651 L22: 2.1840 REMARK 3 L33: 1.8722 L12: -1.1845 REMARK 3 L13: -0.5986 L23: 0.6932 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: -0.0199 S13: 0.1026 REMARK 3 S21: 0.0094 S22: 0.0347 S23: 0.1005 REMARK 3 S31: -0.1251 S32: -0.1594 S33: -0.0215 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 2 THROUGH 2 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1897 -18.0350 -15.6751 REMARK 3 T TENSOR REMARK 3 T11: 0.2404 T22: 0.8306 REMARK 3 T33: 0.9977 T12: -0.2226 REMARK 3 T13: 0.2430 T23: -0.1386 REMARK 3 L TENSOR REMARK 3 L11: 2.0001 L22: 2.0000 REMARK 3 L33: 2.0001 L12: -8.6888 REMARK 3 L13: 1.9997 L23: 2.0001 REMARK 3 S TENSOR REMARK 3 S11: -3.6554 S12: 19.7601 S13: -0.9079 REMARK 3 S21: -3.7296 S22: 0.2636 S23: 6.9436 REMARK 3 S31: -1.4618 S32: 1.5563 S33: 3.3618 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39340 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 43.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.69500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 6I8L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% MPD AND 0.1 M SPG BUFFER PH 6.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.79500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.65000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.69250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.65000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 10.89750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.65000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.65000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.69250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.65000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.65000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 10.89750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 21.79500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 48 REMARK 465 PRO B 49 REMARK 465 ARG B 50 REMARK 465 ARG B 51 REMARK 465 ALA B 119 REMARK 465 THR B 120 REMARK 465 SER B 121 REMARK 465 ARG B 122 REMARK 465 ILE B 123 REMARK 465 SER B 124 REMARK 465 ASP B 125 REMARK 465 ALA B 126 REMARK 465 HIS B 127 REMARK 465 ASP B 195 REMARK 465 SER B 196 REMARK 465 ASN B 197 REMARK 465 ASP B 198 REMARK 465 SER B 199 REMARK 465 PRO B 200 REMARK 465 PRO B 201 REMARK 465 ALA B 202 REMARK 465 GLU B 203 REMARK 465 ARG B 204 REMARK 465 GLU B 205 REMARK 465 PRO B 206 REMARK 465 GLY B 207 REMARK 465 GLU B 208 REMARK 465 VAL B 209 REMARK 465 VAL B 210 REMARK 465 ASP B 211 REMARK 465 LYS B 222 REMARK 465 GLU B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 52 N CB CG OD1 ND2 REMARK 470 LYS B 73 NZ REMARK 470 ARG B 117 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 145 CG OD1 OD2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 GLU B 237 CD OE1 OE2 REMARK 470 LYS B 239 CG CD CE NZ REMARK 470 LYS B 260 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 116 O HOH B 401 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 83 86.20 -150.23 REMARK 500 LYS B 104 -1.50 -142.81 REMARK 500 ARG B 117 -86.32 -121.99 REMARK 500 VAL B 161 -61.16 67.50 REMARK 500 ASP B 173 86.43 -156.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JC5 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 308 DBREF 6QPL B 49 262 UNP Q9Y657 SPIN1_HUMAN 49 262 SEQADV 6QPL MET B 48 UNP Q9Y657 INITIATING METHIONINE SEQADV 6QPL ALA B 263 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL GLU B 264 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL ASN B 265 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL LEU B 266 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL TYR B 267 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL PHE B 268 UNP Q9Y657 EXPRESSION TAG SEQADV 6QPL GLN B 269 UNP Q9Y657 EXPRESSION TAG SEQRES 1 B 222 MET PRO ARG ARG ASN ILE VAL GLY CYS ARG ILE GLN HIS SEQRES 2 B 222 GLY TRP LYS GLU GLY ASN GLY PRO VAL THR GLN TRP LYS SEQRES 3 B 222 GLY THR VAL LEU ASP GLN VAL PRO VAL ASN PRO SER LEU SEQRES 4 B 222 TYR LEU ILE LYS TYR ASP GLY PHE ASP CYS VAL TYR GLY SEQRES 5 B 222 LEU GLU LEU ASN LYS ASP GLU ARG VAL SER ALA LEU GLU SEQRES 6 B 222 VAL LEU PRO ASP ARG VAL ALA THR SER ARG ILE SER ASP SEQRES 7 B 222 ALA HIS LEU ALA ASP THR MET ILE GLY LYS ALA VAL GLU SEQRES 8 B 222 HIS MET PHE GLU THR GLU ASP GLY SER LYS ASP GLU TRP SEQRES 9 B 222 ARG GLY MET VAL LEU ALA ARG ALA PRO VAL MET ASN THR SEQRES 10 B 222 TRP PHE TYR ILE THR TYR GLU LYS ASP PRO VAL LEU TYR SEQRES 11 B 222 MET TYR GLN LEU LEU ASP ASP TYR LYS GLU GLY ASP LEU SEQRES 12 B 222 ARG ILE MET PRO ASP SER ASN ASP SER PRO PRO ALA GLU SEQRES 13 B 222 ARG GLU PRO GLY GLU VAL VAL ASP SER LEU VAL GLY LYS SEQRES 14 B 222 GLN VAL GLU TYR ALA LYS GLU ASP GLY SER LYS ARG THR SEQRES 15 B 222 GLY MET VAL ILE HIS GLN VAL GLU ALA LYS PRO SER VAL SEQRES 16 B 222 TYR PHE ILE LYS PHE ASP ASP ASP PHE HIS ILE TYR VAL SEQRES 17 B 222 TYR ASP LEU VAL LYS THR SER ALA GLU ASN LEU TYR PHE SEQRES 18 B 222 GLN HET MPD B 301 22 HET MPD B 302 22 HET DMS B 303 10 HET DMS B 304 10 HET JC5 B 305 52 HET GLY B 306 10 HET PO4 B 307 5 HET GOL B 308 14 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM JC5 [3-(AMINOMETHYL)-5-[3-(1,3-DIHYDROISOINDOL-2-YL) HETNAM 2 JC5 PROPOXY]-4-METHOXY-PHENYL]METHANAMINE HETNAM GLY GLYCINE HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MPD 2(C6 H14 O2) FORMUL 4 DMS 2(C2 H6 O S) FORMUL 6 JC5 C20 H27 N3 O2 FORMUL 7 GLY C2 H5 N O2 FORMUL 8 PO4 O4 P 3- FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *108(H2 O) HELIX 1 AA1 LEU B 128 ILE B 133 5 6 HELIX 2 AA2 GLN B 180 GLU B 187 1 8 HELIX 3 AA3 LYS B 260 GLU B 264 5 5 SHEET 1 AA1 5 TYR B 98 GLU B 101 0 SHEET 2 AA1 5 LEU B 86 TYR B 91 -1 N ILE B 89 O TYR B 98 SHEET 3 AA1 5 THR B 70 GLN B 79 -1 N LEU B 77 O LEU B 88 SHEET 4 AA1 5 ARG B 57 TRP B 62 -1 N HIS B 60 O TRP B 72 SHEET 5 AA1 5 VAL B 108 VAL B 113 -1 O GLU B 112 N GLN B 59 SHEET 1 AA2 5 ASP B 173 TYR B 179 0 SHEET 2 AA2 5 PHE B 166 TYR B 170 -1 N ILE B 168 O TYR B 177 SHEET 3 AA2 5 LYS B 148 ARG B 158 -1 N ALA B 157 O TYR B 167 SHEET 4 AA2 5 ALA B 136 GLU B 142 -1 N HIS B 139 O TRP B 151 SHEET 5 AA2 5 LEU B 190 ILE B 192 -1 O ARG B 191 N GLU B 138 SHEET 1 AA3 5 TYR B 254 ASP B 257 0 SHEET 2 AA3 5 VAL B 242 PHE B 247 -1 N ILE B 245 O TYR B 254 SHEET 3 AA3 5 ARG B 228 GLN B 235 -1 N MET B 231 O LYS B 246 SHEET 4 AA3 5 GLN B 217 TYR B 220 -1 N TYR B 220 O ARG B 228 SHEET 5 AA3 5 LEU B 266 GLN B 269 -1 O TYR B 267 N GLU B 219 SITE 1 AC1 7 GLY B 153 MET B 154 GLU B 171 VAL B 242 SITE 2 AC1 7 VAL B 255 HOH B 424 HOH B 432 SITE 1 AC2 4 TRP B 62 TRP B 72 TYR B 98 HOH B 486 SITE 1 AC3 4 PRO B 81 TYR B 185 LYS B 186 GLY B 188 SITE 1 AC4 1 JC5 B 305 SITE 1 AC5 11 ASP B 95 HIS B 139 PHE B 141 TRP B 151 SITE 2 AC5 11 TYR B 170 TYR B 177 TYR B 179 ASP B 184 SITE 3 AC5 11 DMS B 304 HOH B 425 HOH B 487 SITE 1 AC6 2 ARG B 191 GLN B 269 SITE 1 AC7 5 GLU B 101 ARG B 107 GLY B 146 HOH B 415 SITE 2 AC7 5 HOH B 422 SITE 1 AC8 3 ASP B 224 GLY B 225 SER B 226 CRYST1 115.300 115.300 43.590 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008673 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008673 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022941 0.00000