HEADER MEMBRANE PROTEIN 20-FEB-19 6QS0 TITLE NMR STRUCTURE OF BB_A03, BORRELIA BURGDORFERI OUTER SURFACE TITLE 2 LIPOPROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OUTER MEMBRANE PROTEIN BBA03; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIELLA BURGDORFERI B31; SOURCE 3 ORGANISM_TAXID: 224326; SOURCE 4 GENE: BB_A03; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LIPOPROTEIN, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.FRIDMANIS,K.BRANGULIS,K.JAUDZEMS REVDAT 3 14-JUN-23 6QS0 1 REMARK REVDAT 2 17-FEB-21 6QS0 1 JRNL REVDAT 1 18-MAR-20 6QS0 0 JRNL AUTH J.FRIDMANIS,R.BOBROVS,K.BRANGULIS,K.TARS,K.JAUDZEMS JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF BBA03, BORRELIA JRNL TITL 2 BURGDORFERI COMPETITIVE ADVANTAGE PROMOTING OUTER SURFACE JRNL TITL 3 LIPOPROTEIN. JRNL REF PATHOGENS V. 9 2020 JRNL REFN ISSN 2076-0817 JRNL PMID 33050189 JRNL DOI 10.3390/PATHOGENS9100826 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS 1.2 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100450. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.08 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.03 % W/V REMARK 210 SODIUM AZIDE, 1 MM EDTA, 2 MM [U- REMARK 210 13C; U-15N] BB_A03, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D HNCO; 3D HNCA; 3D REMARK 210 CBCA(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CANDID 2.02, CARA 1.8.4, TOPSPIN REMARK 210 3.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 78 OD1 ASP A 82 1.57 REMARK 500 HZ2 LYS A 81 OE2 GLU A 85 1.59 REMARK 500 OD1 ASP A 72 HZ1 LYS A 119 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 3 140.88 -174.15 REMARK 500 1 THR A 5 78.72 43.25 REMARK 500 1 ASN A 15 75.47 56.23 REMARK 500 2 ALA A 2 99.76 -64.64 REMARK 500 2 MET A 3 -32.54 175.54 REMARK 500 2 THR A 5 80.65 51.68 REMARK 500 2 GLN A 108 31.64 73.87 REMARK 500 3 ASN A 15 71.43 64.59 REMARK 500 4 THR A 5 75.31 43.75 REMARK 500 5 THR A 5 108.15 -39.37 REMARK 500 5 ASN A 15 79.87 41.29 REMARK 500 6 THR A 5 103.73 -43.18 REMARK 500 6 ASN A 15 94.76 63.26 REMARK 500 7 THR A 5 107.31 -49.23 REMARK 500 7 ASN A 15 79.44 62.32 REMARK 500 7 ASN A 107 51.34 -117.89 REMARK 500 8 MET A 3 -58.39 -169.76 REMARK 500 8 ASN A 15 78.06 62.17 REMARK 500 8 ASP A 120 52.60 -99.70 REMARK 500 9 ASN A 15 65.60 64.91 REMARK 500 9 THR A 121 -82.66 -76.51 REMARK 500 10 THR A 5 100.46 -41.00 REMARK 500 10 ASN A 15 75.33 55.68 REMARK 500 11 ASN A 15 82.73 67.52 REMARK 500 12 THR A 5 77.32 40.40 REMARK 500 12 ASN A 15 80.25 64.12 REMARK 500 13 MET A 3 -76.76 64.97 REMARK 500 13 ASN A 15 75.81 55.94 REMARK 500 14 ASN A 15 86.86 62.51 REMARK 500 14 THR A 121 -79.15 -62.03 REMARK 500 15 THR A 5 76.38 46.65 REMARK 500 15 ASN A 15 84.51 57.57 REMARK 500 15 ASN A 107 44.98 -102.70 REMARK 500 16 THR A 5 102.78 -44.55 REMARK 500 17 THR A 5 109.00 -52.77 REMARK 500 17 ASN A 15 74.85 60.41 REMARK 500 18 THR A 5 88.76 41.12 REMARK 500 18 ASN A 15 103.77 64.34 REMARK 500 18 THR A 121 -77.30 -77.64 REMARK 500 19 THR A 5 78.53 46.73 REMARK 500 19 SER A 47 19.31 -152.43 REMARK 500 19 GLN A 108 33.46 70.01 REMARK 500 19 THR A 121 -81.41 -76.61 REMARK 500 20 ASP A 120 36.83 -89.35 REMARK 500 20 THR A 121 -75.16 -89.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34361 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF BB_A03, BORRELIA BURGDORFERI OUTER SURFACE REMARK 900 LIPOPROTEIN DBREF 6QS0 A 5 122 UNP Q44849 Y2503_BORBU 52 169 SEQADV 6QS0 GLY A 1 UNP Q44849 EXPRESSION TAG SEQADV 6QS0 ALA A 2 UNP Q44849 EXPRESSION TAG SEQADV 6QS0 MET A 3 UNP Q44849 EXPRESSION TAG SEQADV 6QS0 GLY A 4 UNP Q44849 EXPRESSION TAG SEQRES 1 A 122 GLY ALA MET GLY THR PRO LEU GLU LYS LEU VAL SER ARG SEQRES 2 A 122 LEU ASN LEU ASN ASN THR GLU LYS GLU THR LEU THR PHE SEQRES 3 A 122 LEU THR ASN LEU LEU LYS GLU LYS LEU VAL ASP PRO ASN SEQRES 4 A 122 ILE GLY LEU HIS PHE LYS ASN SER GLY GLY ASP GLU SER SEQRES 5 A 122 LYS ILE GLU GLU SER VAL GLN LYS PHE LEU SER GLU LEU SEQRES 6 A 122 LYS GLU ASP GLU ILE LYS ASP LEU LEU ALA LYS ILE LYS SEQRES 7 A 122 GLU ASN LYS ASP LYS LYS GLU LYS ASP PRO GLU GLU LEU SEQRES 8 A 122 ASN THR TYR LYS SER ILE LEU ALA SER GLY PHE ASP GLY SEQRES 9 A 122 ILE PHE ASN GLN ALA ASP SER LYS THR THR LEU ASN LYS SEQRES 10 A 122 LEU LYS ASP THR ILE HELIX 1 AA1 PRO A 6 ASN A 15 1 10 HELIX 2 AA2 ASN A 17 LEU A 35 1 19 HELIX 3 AA3 GLY A 41 GLY A 48 1 8 HELIX 4 AA4 ASP A 50 GLU A 64 1 15 HELIX 5 AA5 LYS A 66 GLU A 85 1 20 HELIX 6 AA6 ASP A 87 ASP A 103 1 17 HELIX 7 AA7 GLY A 104 GLN A 108 5 5 HELIX 8 AA8 ASP A 110 ASP A 120 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1