HEADER BIOSYNTHETIC PROTEIN 21-FEB-19 6QSR TITLE THE DEHYDRATASE HETEROCOMPLEX APEI:P FROM XENORHABDUS DOUCETIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMP-DEPENDENT SYNTHETASE AND LIGASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-HYDROXYACYL-(ACYL-CARRIER-PROTEIN) DEHYDRATASE COMPND 7 FABA/FABZ; COMPND 8 CHAIN: B; COMPND 9 EC: 4.2.1.-; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: N-TERMINAL STREP-TEV-TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENORHABDUS DOUCETIAE; SOURCE 3 ORGANISM_TAXID: 351671; SOURCE 4 GENE: XDD1_3466; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCDF-DUET; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: XENORHABDUS DOUCETIAE; SOURCE 12 ORGANISM_TAXID: 351671; SOURCE 13 GENE: XDD1_3473; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: GOLD(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PCDF-DUET KEYWDS ARYL POLYENE PIGMENT, BIOSYNTHESIS, TYPE II POLYKETIDE SYNTHASE, KEYWDS 2 DEHYDRATION, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.L.C.GRAMMBITTER,M.SCHMALHOFER,M.GROLL,H.BODE REVDAT 3 24-JAN-24 6QSR 1 REMARK REVDAT 2 30-OCT-19 6QSR 1 JRNL REVDAT 1 03-APR-19 6QSR 0 JRNL AUTH G.L.C.GRAMMBITTER,M.SCHMALHOFER,K.KARIMI,Y.M.SHI, JRNL AUTH 2 T.A.SCHONER,N.J.TOBIAS,N.MORGNER,M.GROLL,H.B.BODE JRNL TITL AN UNCOMMON TYPE II PKS CATALYZES BIOSYNTHESIS OF ARYL JRNL TITL 2 POLYENE PIGMENTS. JRNL REF J.AM.CHEM.SOC. V. 141 16615 2019 JRNL REFN ESSN 1520-5126 JRNL PMID 30908039 JRNL DOI 10.1021/JACS.8B10776 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 22103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1163 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1606 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2127 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.36000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.419 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.059 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2196 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2030 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2982 ; 1.294 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4719 ; 0.884 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 5.933 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 104 ;40.447 ;24.231 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 377 ;15.119 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.301 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 324 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2411 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 445 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 1.392 ; 2.305 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1056 ; 1.390 ; 2.301 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1317 ; 1.505 ; 3.436 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1318 ; 1.505 ; 3.440 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1139 ; 1.866 ; 2.907 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1140 ; 1.865 ; 2.910 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1664 ; 1.667 ; 4.134 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2284 ; 2.587 ;27.419 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2269 ; 2.484 ;27.236 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4226 ; 1.053 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 61 ;22.227 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4217 ; 4.305 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 50.3805 13.5100 12.7718 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: 0.0617 REMARK 3 T33: 0.0734 T12: -0.0027 REMARK 3 T13: -0.0220 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.5676 L22: 0.1849 REMARK 3 L33: 0.0338 L12: 0.0374 REMARK 3 L13: 0.1065 L23: 0.0384 REMARK 3 S TENSOR REMARK 3 S11: -0.0736 S12: 0.0255 S13: -0.0249 REMARK 3 S21: -0.0185 S22: 0.0542 S23: -0.0277 REMARK 3 S31: -0.0263 S32: 0.0144 S33: 0.0194 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 160 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2807 28.9354 24.6743 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0422 REMARK 3 T33: 0.0300 T12: -0.0068 REMARK 3 T13: -0.0265 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.3024 L22: 0.1898 REMARK 3 L33: 0.1148 L12: -0.1928 REMARK 3 L13: -0.0717 L23: -0.0335 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: -0.0248 S13: 0.0379 REMARK 3 S21: 0.0096 S22: -0.0029 S23: -0.0194 REMARK 3 S31: -0.0269 S32: 0.0206 S33: -0.0058 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QSR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23313 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ESI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 30% PEG 6000, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.34000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.88500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.34000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.88500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 246 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 101 REMARK 465 HIS A 102 REMARK 465 ASN A 103 REMARK 465 GLY A 104 REMARK 465 SER A 105 REMARK 465 GLU A 106 REMARK 465 GLY A 107 REMARK 465 MET B -14 REMARK 465 TRP B -13 REMARK 465 SER B -12 REMARK 465 HIS B -11 REMARK 465 PRO B -10 REMARK 465 GLN B -9 REMARK 465 PHE B -8 REMARK 465 GLU B -7 REMARK 465 LYS B -6 REMARK 465 GLU B -5 REMARK 465 ASN B -4 REMARK 465 LEU B -3 REMARK 465 TYR B -2 REMARK 465 PHE B -1 REMARK 465 GLN B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 ASP B 3 REMARK 465 TYR B 4 REMARK 465 LEU B 5 REMARK 465 PRO B 6 REMARK 465 VAL B 7 REMARK 465 ASP B 8 REMARK 465 GLN B 161 REMARK 465 ASP B 162 REMARK 465 GLY B 163 REMARK 465 VAL B 164 REMARK 465 ALA B 165 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 225 O HOH A 225 2656 1.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 36 119.66 -161.09 REMARK 500 SER A 63 -54.34 -121.10 REMARK 500 LEU B 119 -63.51 -98.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 14 O REMARK 620 2 LEU B 17 O 83.0 REMARK 620 3 HIS B 19 O 118.9 93.6 REMARK 620 4 HOH B 327 O 91.4 166.6 99.7 REMARK 620 5 HOH B 346 O 123.2 87.4 117.5 85.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ESI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM ERWINIA REMARK 900 CAROTOVORA SUBSP. ATROSEPTICA. NORTHEAST STRUCTURAL GENOMICS TARGET REMARK 900 EWR179 DBREF1 6QSR A 1 119 UNP A0A068QWX2_9GAMM DBREF2 6QSR A A0A068QWX2 1 119 DBREF1 6QSR B 2 165 UNP A0A068QW34_9GAMM DBREF2 6QSR B A0A068QW34 2 165 SEQADV 6QSR MET B -14 UNP A0A068QW3 INITIATING METHIONINE SEQADV 6QSR TRP B -13 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR SER B -12 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR HIS B -11 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR PRO B -10 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR GLN B -9 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR PHE B -8 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR GLU B -7 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR LYS B -6 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR GLU B -5 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR ASN B -4 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR LEU B -3 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR TYR B -2 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR PHE B -1 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR GLN B 0 UNP A0A068QW3 EXPRESSION TAG SEQADV 6QSR GLY B 1 UNP A0A068QW3 EXPRESSION TAG SEQRES 1 A 119 MET LYS PRO ILE GLU ILE HIS ARG GLU GLN PRO ALA GLN SEQRES 2 A 119 HIS GLU ALA MET ILE GLN LEU TYR LEU ASP PRO THR LEU SEQRES 3 A 119 ASP TRP PHE ARG GLY HIS PHE PRO VAL GLN PRO LEU LEU SEQRES 4 A 119 PRO GLY VAL ALA GLN ILE ASP TRP VAL MET HIS TYR ALA SEQRES 5 A 119 GLN THR LEU LEU ALA PRO GLY TRP SER PHE SER SER ILE SEQRES 6 A 119 GLU MET VAL LYS PHE GLN PHE PRO LEU GLN PRO GLY ASN SEQRES 7 A 119 THR LEU LEU LEU LYS ILE ASN TRP ASP GLU LYS LYS HIS SEQRES 8 A 119 LEU LEU THR PHE ARG TYR ASP LEU ASP THR HIS ASN GLY SEQRES 9 A 119 SER GLU GLY GLN THR ALA SER GLN GLY LYS ILE LYS LEU SEQRES 10 A 119 CYS ARG SEQRES 1 B 180 MET TRP SER HIS PRO GLN PHE GLU LYS GLU ASN LEU TYR SEQRES 2 B 180 PHE GLN GLY PRO ASP TYR LEU PRO VAL ASP ARG TYR LEU SEQRES 3 B 180 PRO VAL ASP ARG TYR LEU PRO HIS GLU ALA PRO MET VAL SEQRES 4 B 180 LEU LEU GLU GLN VAL ILE ASN VAL SER ASP ASN HIS VAL SEQRES 5 B 180 HIS CYS GLN VAL THR VAL SER ARG ASP GLY VAL LEU SER SEQRES 6 B 180 PRO PHE LEU ASN GLN ASP GLY HIS LEU PRO GLY TRP PHE SEQRES 7 B 180 ALA ILE GLU MET MET ALA GLN ALA ILE GLY VAL TRP SER SEQRES 8 B 180 GLY TRP HIS ARG LYS GLU ARG LYS GLU ALA ASP SER ALA SEQRES 9 B 180 LEU GLY MET LEU LEU GLY GLY ARG ALA VAL ARG CYS GLN SEQRES 10 B 180 VAL PRO ALA PHE THR GLN GLY SER VAL LEU ASP ILE GLN SEQRES 11 B 180 MET ASN LEU LEU LEU GLN ASP GLU LYS PHE GLY SER PHE SEQRES 12 B 180 GLU GLY GLU ILE SER CYS TYR GLY THR VAL LEU VAL THR SEQRES 13 B 180 GLY ARG LEU ASN THR TYR GLN PRO ASN LYS THR GLU LEU SEQRES 14 B 180 ILE GLN LEU ILE ASN LYS GLN ASP GLY VAL ALA HET NA B 201 1 HETNAM NA SODIUM ION FORMUL 3 NA NA 1+ FORMUL 4 HOH *105(H2 O) HELIX 1 AA1 LEU A 26 ARG A 30 5 5 HELIX 2 AA2 PRO A 40 LEU A 56 1 17 HELIX 3 AA3 PRO B 12 LEU B 17 5 6 HELIX 4 AA4 LEU B 49 LEU B 53 5 5 HELIX 5 AA5 PHE B 63 ARG B 83 1 21 HELIX 6 AA6 ASN B 150 LYS B 160 1 11 SHEET 1 AA112 ILE A 4 GLU A 9 0 SHEET 2 AA112 GLU A 15 TYR A 21 -1 O GLN A 19 N HIS A 7 SHEET 3 AA112 THR A 79 ASP A 87 -1 O LEU A 82 N ILE A 18 SHEET 4 AA112 LEU A 92 LEU A 99 -1 O LEU A 92 N ASP A 87 SHEET 5 AA112 THR A 109 CYS A 118 -1 O ILE A 115 N LEU A 93 SHEET 6 AA112 SER A 61 PHE A 70 -1 N SER A 61 O CYS A 118 SHEET 7 AA112 MET B 92 CYS B 101 -1 O CYS B 101 N SER A 63 SHEET 8 AA112 THR B 137 TYR B 147 -1 O ASN B 145 N GLY B 95 SHEET 9 AA112 PHE B 125 CYS B 134 -1 N GLY B 130 O GLY B 142 SHEET 10 AA112 VAL B 111 GLN B 121 -1 N ASP B 113 O SER B 133 SHEET 11 AA112 HIS B 36 THR B 42 -1 N VAL B 41 O LEU B 112 SHEET 12 AA112 GLN B 28 SER B 33 -1 N ASN B 31 O HIS B 38 SHEET 1 AA2 2 LEU B 59 PRO B 60 0 SHEET 2 AA2 2 ALA B 105 PHE B 106 -1 O PHE B 106 N LEU B 59 LINK O ASP B 14 NA NA B 201 1555 1555 2.39 LINK O LEU B 17 NA NA B 201 1555 1555 2.43 LINK O HIS B 19 NA NA B 201 1555 1555 2.30 LINK NA NA B 201 O HOH B 327 1555 1555 2.44 LINK NA NA B 201 O HOH B 346 1555 1555 2.22 CISPEP 1 HIS A 32 PHE A 33 0 1.22 CISPEP 2 ALA B 21 PRO B 22 0 9.34 SITE 1 AC1 5 ASP B 14 LEU B 17 HIS B 19 HOH B 327 SITE 2 AC1 5 HOH B 346 CRYST1 144.680 47.770 42.680 90.00 104.65 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006912 0.000000 0.001807 0.00000 SCALE2 0.000000 0.020934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024217 0.00000