HEADER OXIDOREDUCTASE 26-FEB-19 6QU0 TITLE STRUCTURE OF AZOREDUCTASE FROM BACILLUS SP. A01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FMN-DEPENDENT NADH-AZOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AZO-DYE REDUCTASE,FMN-DEPENDENT NADH-AZO COMPOUND COMPND 5 OXIDOREDUCTASE; COMPND 6 EC: 1.7.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS OKHENSIS; SOURCE 3 ORGANISM_TAXID: 333138; SOURCE 4 GENE: AZOR, LQ50_08590; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLAVOPROTEIN OXIDOREDUCTASE FMN AZOREDUCTASE AZO DYES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SAVINO,M.W.FRAAIJE REVDAT 5 24-JAN-24 6QU0 1 REMARK REVDAT 4 22-APR-20 6QU0 1 REMARK REVDAT 3 04-MAR-20 6QU0 1 JRNL REVDAT 2 19-FEB-20 6QU0 1 JRNL REVDAT 1 05-FEB-20 6QU0 0 JRNL AUTH E.ROMERO,S.SAVINO,M.W.FRAAIJE,N.LONCAR JRNL TITL MECHANISTIC AND CRYSTALLOGRAPHIC STUDIES OF AZOREDUCTASE JRNL TITL 2 AZOA FROMBACILLUS WAKOENSISA01. JRNL REF ACS CHEM.BIOL. V. 15 504 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 31967777 JRNL DOI 10.1021/ACSCHEMBIO.9B00970 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 40837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2092 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2867 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.3600 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3313 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 79 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.42000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 2.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.883 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3501 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3162 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4744 ; 1.632 ; 1.664 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7362 ; 1.367 ; 1.594 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 424 ; 6.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;34.818 ;23.735 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 566 ;15.049 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.040 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 441 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3860 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 718 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1690 ; 2.985 ; 3.290 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1689 ; 2.986 ; 3.289 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2110 ; 4.272 ; 4.921 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2111 ; 4.271 ; 4.921 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1811 ; 3.734 ; 3.707 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1804 ; 3.640 ; 3.651 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2621 ; 5.425 ; 5.297 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 14756 ;11.080 ;62.815 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 14658 ;11.084 ;62.634 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54179 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43095 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 42.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3W7A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M AMMONIUM SULFATE 25% PEG 4000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.48500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.52000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.48500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 MET B 1 CG SD CE REMARK 470 THR B 137 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C PHE B 211 O HOH B 403 1.48 REMARK 500 O HOH B 402 O HOH B 468 1.59 REMARK 500 NH2 ARG B 203 O HOH B 401 1.63 REMARK 500 O HOH B 417 O HOH B 462 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 129 CD GLU A 129 OE1 0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 147 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 66.09 -115.35 REMARK 500 THR A 15 43.10 -92.86 REMARK 500 GLN A 16 53.27 -178.36 REMARK 500 ASN A 34 70.28 -116.55 REMARK 500 SER A 106 -154.02 -143.52 REMARK 500 LYS A 123 -64.51 -120.71 REMARK 500 LEU A 136 53.37 -93.14 REMARK 500 MET A 189 60.82 -152.29 REMARK 500 THR B 2 125.47 -32.35 REMARK 500 SER B 65 23.71 -159.16 REMARK 500 SER B 106 -155.14 -144.46 REMARK 500 LEU B 136 49.93 -96.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 DBREF1 6QU0 A 1 211 UNP A0A0B0IKH9_9BACI DBREF2 6QU0 A A0A0B0IKH9 1 211 DBREF1 6QU0 B 1 211 UNP A0A0B0IKH9_9BACI DBREF2 6QU0 B A0A0B0IKH9 1 211 SEQADV 6QU0 THR A 41 UNP A0A0B0IKH ALA 41 CONFLICT SEQADV 6QU0 LYS A 199 UNP A0A0B0IKH ASN 199 CONFLICT SEQADV 6QU0 THR B 41 UNP A0A0B0IKH ALA 41 CONFLICT SEQADV 6QU0 LYS B 199 UNP A0A0B0IKH ASN 199 CONFLICT SEQRES 1 A 211 MET THR LYS VAL LEU TYR ILE THR ALA HIS PRO HIS ASP SEQRES 2 A 211 ASP THR GLN SER PHE SER MET ALA VAL GLY LYS ALA PHE SEQRES 3 A 211 ILE ASP THR TYR LYS GLU VAL ASN PRO ASP HIS GLU VAL SEQRES 4 A 211 GLU THR ILE ASP LEU TYR ILE GLU ASP ILE PRO HIS ILE SEQRES 5 A 211 ASP VAL ASP VAL PHE SER GLY TRP GLY LYS LEU ARG SER SEQRES 6 A 211 GLY GLN GLY PHE ASP GLN LEU SER SER ASP GLU LYS ALA SEQRES 7 A 211 LYS VAL GLY ARG LEU SER GLU LEU CYS GLU GLN PHE VAL SEQRES 8 A 211 SER ALA ASP LYS TYR ILE PHE VAL SER PRO LEU TRP ASN SEQRES 9 A 211 PHE SER PHE PRO PRO VAL LEU LYS ALA TYR ILE ASP SER SEQRES 10 A 211 VAL ALA VAL ALA GLY LYS THR PHE LYS TYR THR GLU GLN SEQRES 11 A 211 GLY PRO VAL GLY LEU LEU THR ASP LYS LYS ALA LEU HIS SEQRES 12 A 211 ILE GLN ALA ARG GLY GLY ILE TYR SER GLU GLY PRO ALA SEQRES 13 A 211 ALA GLN MET GLU MET GLY HIS ARG TYR LEU SER ILE ILE SEQRES 14 A 211 MET GLN PHE PHE GLY VAL PRO SER PHE ASP GLY LEU PHE SEQRES 15 A 211 VAL GLU GLY HIS ASN ALA MET PRO ASP LYS ALA GLN GLU SEQRES 16 A 211 ILE LYS GLU LYS ALA VAL ALA ARG ALA LYS ASP LEU ALA SEQRES 17 A 211 HIS THR PHE SEQRES 1 B 211 MET THR LYS VAL LEU TYR ILE THR ALA HIS PRO HIS ASP SEQRES 2 B 211 ASP THR GLN SER PHE SER MET ALA VAL GLY LYS ALA PHE SEQRES 3 B 211 ILE ASP THR TYR LYS GLU VAL ASN PRO ASP HIS GLU VAL SEQRES 4 B 211 GLU THR ILE ASP LEU TYR ILE GLU ASP ILE PRO HIS ILE SEQRES 5 B 211 ASP VAL ASP VAL PHE SER GLY TRP GLY LYS LEU ARG SER SEQRES 6 B 211 GLY GLN GLY PHE ASP GLN LEU SER SER ASP GLU LYS ALA SEQRES 7 B 211 LYS VAL GLY ARG LEU SER GLU LEU CYS GLU GLN PHE VAL SEQRES 8 B 211 SER ALA ASP LYS TYR ILE PHE VAL SER PRO LEU TRP ASN SEQRES 9 B 211 PHE SER PHE PRO PRO VAL LEU LYS ALA TYR ILE ASP SER SEQRES 10 B 211 VAL ALA VAL ALA GLY LYS THR PHE LYS TYR THR GLU GLN SEQRES 11 B 211 GLY PRO VAL GLY LEU LEU THR ASP LYS LYS ALA LEU HIS SEQRES 12 B 211 ILE GLN ALA ARG GLY GLY ILE TYR SER GLU GLY PRO ALA SEQRES 13 B 211 ALA GLN MET GLU MET GLY HIS ARG TYR LEU SER ILE ILE SEQRES 14 B 211 MET GLN PHE PHE GLY VAL PRO SER PHE ASP GLY LEU PHE SEQRES 15 B 211 VAL GLU GLY HIS ASN ALA MET PRO ASP LYS ALA GLN GLU SEQRES 16 B 211 ILE LYS GLU LYS ALA VAL ALA ARG ALA LYS ASP LEU ALA SEQRES 17 B 211 HIS THR PHE HET FMN A 301 31 HET GOL A 302 6 HET FMN B 301 31 HET GOL B 302 6 HET SO4 B 303 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *138(H2 O) HELIX 1 AA1 SER A 17 ASN A 34 1 18 HELIX 2 AA2 ASP A 53 ASP A 55 5 3 HELIX 3 AA3 GLY A 66 GLN A 71 1 6 HELIX 4 AA4 SER A 73 ALA A 93 1 21 HELIX 5 AA5 PRO A 108 ALA A 119 1 12 HELIX 6 AA6 PRO A 155 GLU A 160 5 6 HELIX 7 AA7 MET A 161 PHE A 173 1 13 HELIX 8 AA8 LYS A 192 ALA A 208 1 17 HELIX 9 AA9 SER B 17 ASN B 34 1 18 HELIX 10 AB1 GLY B 66 GLN B 71 1 6 HELIX 11 AB2 SER B 73 ALA B 93 1 21 HELIX 12 AB3 PRO B 108 ALA B 119 1 12 HELIX 13 AB4 ALA B 156 GLU B 160 5 5 HELIX 14 AB5 MET B 161 PHE B 173 1 13 HELIX 15 AB6 MET B 189 ASP B 191 5 3 HELIX 16 AB7 LYS B 192 HIS B 209 1 18 SHEET 1 AA1 5 GLU A 38 ASP A 43 0 SHEET 2 AA1 5 LYS A 3 THR A 8 1 N VAL A 4 O GLU A 40 SHEET 3 AA1 5 LYS A 95 PRO A 101 1 O ILE A 97 N ILE A 7 SHEET 4 AA1 5 LYS A 140 ARG A 147 1 O ILE A 144 N PHE A 98 SHEET 5 AA1 5 SER A 177 GLU A 184 1 O LEU A 181 N HIS A 143 SHEET 1 AA2 2 PHE A 57 GLY A 59 0 SHEET 2 AA2 2 LYS A 62 LEU A 63 -1 O LYS A 62 N SER A 58 SHEET 1 AA3 2 PHE A 125 THR A 128 0 SHEET 2 AA3 2 GLY A 131 GLY A 134 -1 O VAL A 133 N LYS A 126 SHEET 1 AA4 5 GLU B 38 ASP B 43 0 SHEET 2 AA4 5 LYS B 3 THR B 8 1 N VAL B 4 O GLU B 38 SHEET 3 AA4 5 LYS B 95 PRO B 101 1 O ILE B 97 N ILE B 7 SHEET 4 AA4 5 LYS B 140 ARG B 147 1 O ILE B 144 N PHE B 98 SHEET 5 AA4 5 SER B 177 GLU B 184 1 O LEU B 181 N HIS B 143 SHEET 1 AA5 2 PHE B 57 GLY B 59 0 SHEET 2 AA5 2 LYS B 62 LEU B 63 -1 O LYS B 62 N SER B 58 SHEET 1 AA6 2 PHE B 125 THR B 128 0 SHEET 2 AA6 2 GLY B 131 GLY B 134 -1 O VAL B 133 N LYS B 126 SITE 1 AC1 20 HIS A 10 ASP A 14 SER A 17 PHE A 18 SITE 2 AC1 20 SER A 19 PRO A 101 LEU A 102 TRP A 103 SITE 3 AC1 20 ASN A 104 PHE A 105 ALA A 146 GLY A 148 SITE 4 AC1 20 GLY A 149 TYR A 151 HIS A 186 ASN A 187 SITE 5 AC1 20 HOH A 432 HOH A 440 ILE B 52 TRP B 60 SITE 1 AC2 4 VAL A 110 HOH A 460 HIS B 51 VAL B 110 SITE 1 AC3 22 TRP A 60 GLU A 129 HOH A 414 HIS B 10 SITE 2 AC3 22 SER B 17 PHE B 18 SER B 19 PRO B 101 SITE 3 AC3 22 LEU B 102 TRP B 103 ASN B 104 PHE B 105 SITE 4 AC3 22 ALA B 146 GLY B 148 GLY B 149 TYR B 151 SITE 5 AC3 22 HIS B 186 ASN B 187 HOH B 417 HOH B 434 SITE 6 AC3 22 HOH B 436 HOH B 437 SITE 1 AC4 6 LYS A 77 LYS B 126 TYR B 127 THR B 128 SITE 2 AC4 6 LYS B 205 HOH B 442 SITE 1 AC5 6 ARG A 64 SER B 58 ARG B 64 GLY B 66 SITE 2 AC5 6 GLN B 67 GLY B 68 CRYST1 47.209 92.970 103.040 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021182 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009705 0.00000