HEADER SUGAR BINDING PROTEIN 27-FEB-19 6QUD TITLE 2-DEOXY-GALACTOSE REACTION INTERMEDIATE OF A TRUNCATED BETA- TITLE 2 GALACTOSIDASE III FROM BIFIDOBACTERIUM BIFIDUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GALACTOSIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.23; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM BIFIDUM; SOURCE 3 ORGANISM_TAXID: 1681; SOURCE 4 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1423 KEYWDS TIM BARREL, GLYCOSIDE HYDROLASE, HYDROLASE, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.S.THIRUP,J.A.NIELSEN,J.L.ANDERSEN,H.ALSARRAF,M.BLAISE REVDAT 3 24-JAN-24 6QUD 1 HETSYN REVDAT 2 29-JUL-20 6QUD 1 COMPND REMARK HETNAM SITE REVDAT 1 18-MAR-20 6QUD 0 JRNL AUTH J.A.NIELSEN,J.L.ANDERSEN,H.ALSARRAF,M.BLAISE,S.S.THIRUP, JRNL AUTH 2 M.K.LARSEN,J.F.CRAMER JRNL TITL TRUNCATED BETA-GALACTOSIDASE III FROM BIFIDOBACTERIUM JRNL TITL 2 BIFIDUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 46762 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8189 - 4.6684 0.98 4245 150 0.1236 0.1388 REMARK 3 2 4.6684 - 3.7062 0.98 4134 148 0.1230 0.1494 REMARK 3 3 3.7062 - 3.2379 0.98 4112 144 0.1481 0.2066 REMARK 3 4 3.2379 - 2.9419 0.99 4130 147 0.1672 0.2246 REMARK 3 5 2.9419 - 2.7311 0.99 4147 147 0.1776 0.2218 REMARK 3 6 2.7311 - 2.5701 0.97 4031 136 0.1876 0.2467 REMARK 3 7 2.5701 - 2.4414 0.98 4078 147 0.1963 0.2721 REMARK 3 8 2.4414 - 2.3351 0.99 4084 145 0.2046 0.2799 REMARK 3 9 2.3351 - 2.2452 0.99 4108 146 0.2408 0.2901 REMARK 3 10 2.2452 - 2.1678 0.99 4078 141 0.2606 0.3001 REMARK 3 11 2.1678 - 2.1000 0.97 4027 137 0.2344 0.2694 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6530 REMARK 3 ANGLE : 0.570 8891 REMARK 3 CHIRALITY : 0.045 986 REMARK 3 PLANARITY : 0.003 1151 REMARK 3 DIHEDRAL : 11.806 3793 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4453 -11.8869 -27.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.2030 T22: 0.1154 REMARK 3 T33: 0.2183 T12: -0.0133 REMARK 3 T13: 0.0204 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.8529 L22: 0.8106 REMARK 3 L33: 2.6533 L12: 0.6100 REMARK 3 L13: 0.8032 L23: -0.3044 REMARK 3 S TENSOR REMARK 3 S11: 0.0620 S12: -0.0822 S13: 0.0283 REMARK 3 S21: 0.0873 S22: -0.0037 S23: 0.1036 REMARK 3 S31: 0.0870 S32: -0.1731 S33: -0.0693 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4200 10.3345 -40.6037 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.1272 REMARK 3 T33: 0.2203 T12: 0.0153 REMARK 3 T13: -0.0017 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.0233 L22: 0.3677 REMARK 3 L33: 1.1808 L12: 0.1638 REMARK 3 L13: 0.6784 L23: -0.1315 REMARK 3 S TENSOR REMARK 3 S11: -0.1094 S12: 0.0134 S13: 0.1170 REMARK 3 S21: -0.0695 S22: 0.0285 S23: 0.0635 REMARK 3 S31: -0.1432 S32: -0.0130 S33: 0.0775 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 371 THROUGH 535 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0802 -1.3652 -39.1914 REMARK 3 T TENSOR REMARK 3 T11: 0.1909 T22: 0.1936 REMARK 3 T33: 0.2126 T12: 0.0370 REMARK 3 T13: 0.0208 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.1957 L22: 1.0559 REMARK 3 L33: 1.1409 L12: 0.5476 REMARK 3 L13: 0.3028 L23: 0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.0592 S12: 0.1200 S13: -0.1326 REMARK 3 S21: -0.1109 S22: 0.0642 S23: -0.0716 REMARK 3 S31: 0.1011 S32: 0.2744 S33: 0.0187 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 536 THROUGH 776 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3965 6.7968 -18.7855 REMARK 3 T TENSOR REMARK 3 T11: 0.1731 T22: 0.3933 REMARK 3 T33: 0.2399 T12: -0.0214 REMARK 3 T13: -0.0030 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.5267 L22: 0.5167 REMARK 3 L33: 1.3942 L12: 0.0689 REMARK 3 L13: 0.1460 L23: 0.0045 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.0057 S13: -0.0396 REMARK 3 S21: 0.0339 S22: -0.0203 S23: -0.0936 REMARK 3 S31: -0.0441 S32: 0.4907 S33: 0.0140 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 777 THROUGH 912 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6612 6.0143 -4.7775 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.2385 REMARK 3 T33: 0.1698 T12: 0.0070 REMARK 3 T13: 0.0181 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.5975 L22: 1.1159 REMARK 3 L33: 1.3766 L12: 0.1382 REMARK 3 L13: 0.3682 L23: 0.3229 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: -0.2269 S13: 0.0758 REMARK 3 S21: 0.0805 S22: -0.0313 S23: 0.0333 REMARK 3 S31: -0.1290 S32: -0.0097 S33: 0.0209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976252 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46763 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.63500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6QUC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23 % PEG 1500 5 MM GLUCOSE 10 MM REMARK 280 TRIS:HCL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.96000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 33 REMARK 465 GLU A 34 REMARK 465 ASP A 35 REMARK 465 ALA A 36 REMARK 465 THR A 37 REMARK 465 ARG A 38 REMARK 465 SER A 39 REMARK 465 ASP A 40 REMARK 465 SER A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 GLN A 44 REMARK 465 MET A 45 REMARK 465 SER A 46 REMARK 465 SER A 47 REMARK 465 THR A 48 REMARK 465 PRO A 49 REMARK 465 GLU A 50 REMARK 465 VAL A 51 REMARK 465 VAL A 52 REMARK 465 TYR A 53 REMARK 465 SER A 54 REMARK 465 SER A 55 REMARK 465 ASN A 420 REMARK 465 ARG A 421 REMARK 465 SER A 422 REMARK 465 LYS A 423 REMARK 465 ASN A 424 REMARK 465 GLY A 425 REMARK 465 ASN A 426 REMARK 465 MET A 480 REMARK 465 MET A 481 REMARK 465 GLU A 482 REMARK 465 GLY A 483 REMARK 465 ILE A 484 REMARK 465 SER A 485 REMARK 465 GLY A 486 REMARK 465 SER A 487 REMARK 465 VAL A 488 REMARK 465 SER A 489 REMARK 465 GLY A 490 REMARK 465 PHE A 491 REMARK 465 PRO A 492 REMARK 465 GLY A 913 REMARK 465 THR A 914 REMARK 465 SER A 915 REMARK 465 THR A 916 REMARK 465 GLU A 917 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 195 -119.91 66.87 REMARK 500 ASP A 249 30.66 -92.00 REMARK 500 ASP A 417 -82.52 -92.48 REMARK 500 ASP A 429 -157.15 -78.49 REMARK 500 GLU A 451 -106.99 -127.35 REMARK 500 GLU A 565 116.59 -160.34 REMARK 500 ALA A 567 -88.18 68.94 REMARK 500 SER A 585 -149.67 -101.63 REMARK 500 GLU A 631 65.13 25.99 REMARK 500 PRO A 632 41.09 -85.84 REMARK 500 TRP A 687 51.44 -100.98 REMARK 500 ALA A 801 -35.25 -131.28 REMARK 500 THR A 884 -165.75 -100.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 675 O REMARK 620 2 VAL A 678 O 86.7 REMARK 620 3 ASP A 707 OD2 165.7 89.9 REMARK 620 4 HOH A2265 O 84.3 80.5 81.4 REMARK 620 5 HOH A2647 O 79.7 164.0 101.1 89.7 REMARK 620 6 HOH A2725 O 109.2 95.3 84.9 165.7 97.1 REMARK 620 N 1 2 3 4 5 DBREF 6QUD A 33 917 UNP Q9F4D5 Q9F4D5_BIFBI 33 917 SEQRES 1 A 885 VAL GLU ASP ALA THR ARG SER ASP SER THR THR GLN MET SEQRES 2 A 885 SER SER THR PRO GLU VAL VAL TYR SER SER ALA VAL ASP SEQRES 3 A 885 SER LYS GLN ASN ARG THR SER ASP PHE ASP ALA ASN TRP SEQRES 4 A 885 LYS PHE MET LEU SER ASP SER VAL GLN ALA GLN ASP PRO SEQRES 5 A 885 ALA PHE ASP ASP SER ALA TRP GLN GLN VAL ASP LEU PRO SEQRES 6 A 885 HIS ASP TYR SER ILE THR GLN LYS TYR SER GLN SER ASN SEQRES 7 A 885 GLU ALA GLU SER ALA TYR LEU PRO GLY GLY THR GLY TRP SEQRES 8 A 885 TYR ARG LYS SER PHE THR ILE ASP ARG ASP LEU ALA GLY SEQRES 9 A 885 LYS ARG ILE ALA ILE ASN PHE ASP GLY VAL TYR MET ASN SEQRES 10 A 885 ALA THR VAL TRP PHE ASN GLY VAL LYS LEU GLY THR HIS SEQRES 11 A 885 PRO TYR GLY TYR SER PRO PHE SER PHE ASP LEU THR GLY SEQRES 12 A 885 ASN ALA LYS PHE GLY GLY GLU ASN THR ILE VAL VAL LYS SEQRES 13 A 885 VAL GLU ASN ARG LEU PRO SER SER ARG TRP TYR SER GLY SEQRES 14 A 885 SER GLY ILE TYR ARG ASP VAL THR LEU THR VAL THR ASP SEQRES 15 A 885 GLY VAL HIS VAL GLY ASN ASN GLY VAL ALA ILE LYS THR SEQRES 16 A 885 PRO SER LEU ALA THR GLN ASN GLY GLY ASP VAL THR MET SEQRES 17 A 885 ASN LEU THR THR LYS VAL ALA ASN ASP THR GLU ALA ALA SEQRES 18 A 885 ALA ASN ILE THR LEU LYS GLN THR VAL PHE PRO LYS GLY SEQRES 19 A 885 GLY LYS THR ASP ALA ALA ILE GLY THR VAL THR THR ALA SEQRES 20 A 885 SER LYS SER ILE ALA ALA GLY ALA SER ALA ASP VAL THR SEQRES 21 A 885 SER THR ILE THR ALA ALA SER PRO LYS LEU TRP SER ILE SEQRES 22 A 885 LYS ASN PRO ASN LEU TYR THR VAL ARG THR GLU VAL LEU SEQRES 23 A 885 ASN GLY GLY LYS VAL LEU ASP THR TYR ASP THR GLU TYR SEQRES 24 A 885 GLY PHE ARG TRP THR GLY PHE ASP ALA THR SER GLY PHE SEQRES 25 A 885 SER LEU ASN GLY GLU LYS VAL LYS LEU LYS GLY VAL SER SEQRES 26 A 885 MET HIS HIS ASP GLN GLY SER LEU GLY ALA VAL ALA ASN SEQRES 27 A 885 ARG ARG ALA ILE GLU ARG GLN VAL GLU ILE LEU GLN LYS SEQRES 28 A 885 MET GLY VAL ASN SER ILE ARG THR THR HIS ASN PRO ALA SEQRES 29 A 885 ALA LYS ALA LEU ILE ASP VAL CYS ASN GLU LYS GLY VAL SEQRES 30 A 885 LEU VAL VAL GLU GLU VAL PHE ASP MET TRP ASN ARG SER SEQRES 31 A 885 LYS ASN GLY ASN THR GLU ASP TYR GLY LYS TRP PHE GLY SEQRES 32 A 885 GLN ALA ILE ALA GLY ASP ASN ALA VAL LEU GLY GLY ASP SEQRES 33 A 885 LYS ASP GLU THR TRP ALA LYS PHE ASP LEU THR SER THR SEQRES 34 A 885 ILE ASN ARG ASP ARG ASN ALA PRO SER VAL ILE MET TRP SEQRES 35 A 885 SER LEU GLY ASN GLU MET MET GLU GLY ILE SER GLY SER SEQRES 36 A 885 VAL SER GLY PHE PRO ALA THR SER ALA LYS LEU VAL ALA SEQRES 37 A 885 TRP THR LYS ALA ALA ASP SER THR ARG PRO MET THR TYR SEQRES 38 A 885 GLY ASP ASN LYS ILE LYS ALA ASN TRP ASN GLU SER ASN SEQRES 39 A 885 THR MET GLY ASP ASN LEU THR ALA ASN GLY GLY VAL VAL SEQRES 40 A 885 GLY THR ASN TYR SER ASP GLY ALA ASN TYR ASP LYS ILE SEQRES 41 A 885 ARG THR THR HIS PRO SER TRP ALA ILE TYR GLY SER GLU SEQRES 42 A 885 THR ALA SER ALA ILE ASN SER ARG GLY ILE TYR ASN ARG SEQRES 43 A 885 THR THR GLY GLY ALA GLN SER SER ASP LYS GLN LEU THR SEQRES 44 A 885 SER TYR ASP ASN SER ALA VAL GLY TRP GLY ALA VAL ALA SEQRES 45 A 885 SER SER ALA TRP TYR ASP VAL VAL GLN ARG ASP PHE VAL SEQRES 46 A 885 ALA GLY THR TYR VAL TRP THR GLY PHE ASP TYR LEU GLY SEQRES 47 A 885 GLU PRO THR PRO TRP ASN GLY THR GLY SER GLY ALA VAL SEQRES 48 A 885 GLY SER TRP PRO SER PRO LYS ASN SER TYR PHE GLY ILE SEQRES 49 A 885 VAL ASP THR ALA GLY PHE PRO LYS ASP THR TYR TYR PHE SEQRES 50 A 885 TYR GLN SER GLN TRP ASN ASP ASP VAL HIS THR LEU HIS SEQRES 51 A 885 ILE LEU PRO ALA TRP ASN GLU ASN VAL VAL ALA LYS GLY SEQRES 52 A 885 SER GLY ASN ASN VAL PRO VAL VAL VAL TYR THR ASP ALA SEQRES 53 A 885 ALA LYS VAL LYS LEU TYR PHE THR PRO LYS GLY SER THR SEQRES 54 A 885 GLU LYS ARG LEU ILE GLY GLU LYS SER PHE THR LYS LYS SEQRES 55 A 885 THR THR ALA ALA GLY TYR THR TYR GLN VAL TYR GLU GLY SEQRES 56 A 885 SER ASP LYS ASP SER THR ALA HIS LYS ASN MET TYR LEU SEQRES 57 A 885 THR TRP ASN VAL PRO TRP ALA GLU GLY THR ILE SER ALA SEQRES 58 A 885 GLU ALA TYR ASP GLU ASN ASN ARG LEU ILE PRO GLU GLY SEQRES 59 A 885 SER THR GLU GLY ASN ALA SER VAL THR THR THR GLY LYS SEQRES 60 A 885 ALA ALA LYS LEU LYS ALA ASP ALA ASP ARG LYS THR ILE SEQRES 61 A 885 THR ALA ASP GLY LYS ASP LEU SER TYR ILE GLU VAL ASP SEQRES 62 A 885 VAL THR ASP ALA ASN GLY HIS ILE VAL PRO ASP ALA ALA SEQRES 63 A 885 ASN ARG VAL THR PHE ASP VAL LYS GLY ALA GLY LYS LEU SEQRES 64 A 885 VAL GLY VAL ASP ASN GLY SER SER PRO ASP HIS ASP SER SEQRES 65 A 885 TYR GLN ALA ASP ASN ARG LYS ALA PHE SER GLY LYS VAL SEQRES 66 A 885 LEU ALA ILE VAL GLN SER THR LYS GLU ALA GLY GLU ILE SEQRES 67 A 885 THR VAL THR ALA LYS ALA ASP GLY LEU GLN SER SER THR SEQRES 68 A 885 VAL LYS ILE ALA THR THR ALA VAL PRO GLY THR SER THR SEQRES 69 A 885 GLU HET 2DG A2001 10 HET CA A2002 1 HETNAM 2DG 2-DEOXY-ALPHA-D-GALACTOPYRANOSE HETNAM CA CALCIUM ION HETSYN 2DG 2-DEOXY-ALPHA-D-LYXO-HEXOPYRANOSE; 2-DEOXY-ALPHA-D- HETSYN 2 2DG GALACTOSE; 2-DEOXY-D-GALACTOSE; 2-DEOXY-GALACTOSE FORMUL 2 2DG C6 H12 O5 FORMUL 3 CA CA 2+ FORMUL 4 HOH *751(H2 O) HELIX 1 AA1 GLU A 111 ALA A 115 5 5 HELIX 2 AA2 ASP A 131 ALA A 135 5 5 HELIX 3 AA3 THR A 174 ALA A 177 5 4 HELIX 4 AA4 SER A 229 ASN A 234 1 6 HELIX 5 AA5 LYS A 268 ALA A 272 5 5 HELIX 6 AA6 GLN A 362 GLY A 366 5 5 HELIX 7 AA7 ASN A 370 MET A 384 1 15 HELIX 8 AA8 ALA A 397 GLY A 408 1 12 HELIX 9 AA9 ASP A 429 TRP A 433 5 5 HELIX 10 AB1 THR A 452 ARG A 466 1 15 HELIX 11 AB2 THR A 494 ASP A 506 1 13 HELIX 12 AB3 TRP A 522 ASN A 535 1 14 HELIX 13 AB4 ASP A 545 HIS A 556 1 12 HELIX 14 AB5 VAL A 603 GLN A 613 1 11 HELIX 15 AB6 ASP A 665 ASN A 675 1 11 HELIX 16 AB7 GLY A 695 GLY A 697 5 3 HELIX 17 AB8 THR A 753 TYR A 759 5 7 SHEET 1 AA1 4 THR A 64 ASP A 66 0 SHEET 2 AA1 4 VAL A 208 THR A 213 -1 O LEU A 210 N SER A 65 SHEET 3 AA1 4 ARG A 138 PHE A 143 -1 N ARG A 138 O THR A 213 SHEET 4 AA1 4 PHE A 169 ASP A 172 -1 O PHE A 169 N PHE A 143 SHEET 1 AA2 6 GLN A 92 VAL A 94 0 SHEET 2 AA2 6 TRP A 71 LEU A 75 -1 N PHE A 73 O GLN A 92 SHEET 3 AA2 6 GLY A 120 ILE A 130 -1 O ARG A 125 N LYS A 72 SHEET 4 AA2 6 GLY A 181 ASN A 191 -1 O VAL A 189 N GLY A 122 SHEET 5 AA2 6 ALA A 150 PHE A 154 -1 N THR A 151 O LYS A 188 SHEET 6 AA2 6 VAL A 157 HIS A 162 -1 O LEU A 159 N VAL A 152 SHEET 1 AA3 3 VAL A 216 LYS A 226 0 SHEET 2 AA3 3 ASP A 237 ASN A 248 -1 O ALA A 247 N HIS A 217 SHEET 3 AA3 3 SER A 288 ALA A 298 -1 O VAL A 291 N THR A 244 SHEET 1 AA4 3 GLY A 274 THR A 277 0 SHEET 2 AA4 3 ALA A 254 PRO A 264 -1 N GLN A 260 O VAL A 276 SHEET 3 AA4 3 LYS A 281 ILE A 283 -1 O ILE A 283 N ALA A 254 SHEET 1 AA5 4 GLY A 274 THR A 277 0 SHEET 2 AA5 4 ALA A 254 PRO A 264 -1 N GLN A 260 O VAL A 276 SHEET 3 AA5 4 TYR A 311 ASN A 319 -1 O THR A 312 N PHE A 263 SHEET 4 AA5 4 LYS A 322 TYR A 331 -1 O LEU A 324 N VAL A 317 SHEET 1 AA6 3 THR A 336 ASP A 339 0 SHEET 2 AA6 3 GLY A 343 LEU A 346 -1 O GLY A 343 N ASP A 339 SHEET 3 AA6 3 GLU A 349 LYS A 350 -1 O GLU A 349 N LEU A 346 SHEET 1 AA7 9 LEU A 353 SER A 357 0 SHEET 2 AA7 9 SER A 388 ARG A 390 1 O ARG A 390 N VAL A 356 SHEET 3 AA7 9 LEU A 410 GLU A 414 1 O VAL A 412 N ILE A 389 SHEET 4 AA7 9 VAL A 471 ASN A 478 1 O SER A 475 N GLU A 413 SHEET 5 AA7 9 MET A 511 ASP A 515 1 O THR A 512 N LEU A 476 SHEET 6 AA7 9 VAL A 538 ASN A 542 1 O GLY A 540 N ASP A 515 SHEET 7 AA7 9 ILE A 561 ALA A 567 1 O TYR A 562 N THR A 541 SHEET 8 AA7 9 VAL A 617 TRP A 623 1 O GLY A 619 N GLY A 563 SHEET 9 AA7 9 LEU A 353 SER A 357 1 N SER A 357 O VAL A 622 SHEET 1 AA8 3 LEU A 681 LEU A 684 0 SHEET 2 AA8 3 ASN A 699 THR A 706 -1 O TYR A 705 N HIS A 682 SHEET 3 AA8 3 LEU A 760 PRO A 765 -1 O TRP A 762 N VAL A 702 SHEET 1 AA9 4 ARG A 724 SER A 730 0 SHEET 2 AA9 4 LYS A 710 PRO A 717 -1 N LEU A 713 O ILE A 726 SHEET 3 AA9 4 GLY A 769 TYR A 776 -1 O THR A 770 N THR A 716 SHEET 4 AA9 4 SER A 793 THR A 795 -1 O VAL A 794 N ILE A 771 SHEET 1 AB1 2 THR A 732 THR A 735 0 SHEET 2 AB1 2 THR A 741 VAL A 744 -1 O TYR A 742 N LYS A 734 SHEET 1 AB2 4 LYS A 802 ALA A 807 0 SHEET 2 AB2 4 LEU A 819 THR A 827 -1 O THR A 827 N LYS A 802 SHEET 3 AB2 4 LYS A 876 SER A 883 -1 O ALA A 879 N ILE A 822 SHEET 4 AB2 4 GLY A 849 ASP A 855 -1 N LYS A 850 O GLN A 882 SHEET 1 AB3 5 THR A 811 THR A 813 0 SHEET 2 AB3 5 SER A 902 THR A 909 1 O ALA A 907 N ILE A 812 SHEET 3 AB3 5 GLY A 888 LYS A 895 -1 N ILE A 890 O ILE A 906 SHEET 4 AB3 5 ARG A 840 GLY A 847 -1 N LYS A 846 O THR A 891 SHEET 5 AB3 5 ASN A 869 LYS A 871 -1 O ARG A 870 N VAL A 841 LINK OE2 GLU A 565 C1 2DG A2001 1555 1555 1.41 LINK O ASN A 675 CA CA A2002 1555 1555 2.38 LINK O VAL A 678 CA CA A2002 1555 1555 2.36 LINK OD2 ASP A 707 CA CA A2002 1555 1555 2.44 LINK CA CA A2002 O HOH A2265 1555 1555 2.48 LINK CA CA A2002 O HOH A2647 1555 1555 2.48 LINK CA CA A2002 O HOH A2725 1555 1555 2.52 CISPEP 1 LEU A 96 PRO A 97 0 -4.53 CISPEP 2 TYR A 147 MET A 148 0 -6.03 CISPEP 3 THR A 392 HIS A 393 0 -9.57 CISPEP 4 TRP A 623 THR A 624 0 -6.62 CISPEP 5 THR A 633 PRO A 634 0 6.84 CISPEP 6 TRP A 646 PRO A 647 0 1.78 CISPEP 7 LEU A 684 PRO A 685 0 6.72 CRYST1 70.210 53.920 112.620 90.00 106.59 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014243 0.000000 0.004243 0.00000 SCALE2 0.000000 0.018546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009265 0.00000