HEADER ONCOPROTEIN 28-FEB-19 6QUU TITLE CRYSTAL STRUCTURE OF KRAS-G12D IN COMPLEX WITH GMP-PCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: BOUND TO GMP-PCP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PPI, KRAS, GTPASE, CANCER, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.FISCHER,D.KESSLER,B.MUELLAUER,B.WOLKERSTORFER REVDAT 3 15-MAY-24 6QUU 1 REMARK LINK REVDAT 2 25-SEP-19 6QUU 1 JRNL REVDAT 1 31-JUL-19 6QUU 0 JRNL AUTH A.BERGNER,X.COCKCROFT,G.FISCHER,A.GOLLNER,W.HELA,R.KOUSEK, JRNL AUTH 2 A.MANTOULIDIS,L.J.MARTIN,M.MAYER,B.MULLAUER,G.SISZLER, JRNL AUTH 3 B.WOLKERSTORFER,D.KESSLER,D.B.MCCONNELL JRNL TITL KRAS BINDERS HIDDEN IN NATURE. JRNL REF CHEMISTRY V. 25 12037 2019 JRNL REFN ISSN 0947-6539 JRNL PMID 31231840 JRNL DOI 10.1002/CHEM.201902810 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.0 REMARK 3 NUMBER OF REFLECTIONS : 43583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2143 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.54 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 12.94 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 872 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2278 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 829 REMARK 3 BIN R VALUE (WORKING SET) : 0.2297 REMARK 3 BIN FREE R VALUE : 0.1961 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.93 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2664 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 275 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07020 REMARK 3 B22 (A**2) : 0.15580 REMARK 3 B33 (A**2) : -0.22600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.33500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.097 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.086 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.116 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.085 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5474 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9868 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1257 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 885 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5474 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 12 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 371 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6239 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.64 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.38 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 13.1954 -14.5178 38.8650 REMARK 3 T TENSOR REMARK 3 T11: 0.0000 T22: 0.0000 REMARK 3 T33: 0.0000 T12: 0.0000 REMARK 3 T13: 0.0000 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -2.7955 -21.4684 13.1724 REMARK 3 T TENSOR REMARK 3 T11: 0.0000 T22: 0.0000 REMARK 3 T33: 0.0000 T12: 0.0000 REMARK 3 T13: 0.0000 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: 0.0000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QUU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS (VERSION JAN 26 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC (VERSION 1.1.7), REMARK 200 AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43583 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.477 REMARK 200 RESOLUTION RANGE LOW (A) : 42.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 22.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.73600 REMARK 200 R SYM FOR SHELL (I) : 0.73600 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 52% MPD, 0.06M MES, PH 6.4, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.16050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 GLU A 168 REMARK 465 LYS A 169 REMARK 465 MET B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 ARG B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 GLU B 168 REMARK 465 LYS B 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 5 NZ REMARK 480 GLU A 62 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 161 H LYS A 165 1.55 REMARK 500 OE2 GLU A 62 O HOH A 301 1.98 REMARK 500 OE1 GLU A 62 O HOH A 302 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -63.60 -98.28 REMARK 500 GLU A 37 117.41 -171.50 REMARK 500 LYS A 117 32.46 70.04 REMARK 500 SER A 122 44.76 -82.35 REMARK 500 ILE B 36 -64.04 -98.37 REMARK 500 GLU B 37 116.62 -169.72 REMARK 500 ALA B 66 -41.81 147.90 REMARK 500 ASP B 108 55.67 -109.22 REMARK 500 SER B 122 47.17 -82.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 84.3 REMARK 620 3 GCP A 201 O1G 172.6 88.7 REMARK 620 4 GCP A 201 O2B 113.2 159.8 73.3 REMARK 620 5 HOH A 317 O 89.6 89.0 87.8 81.5 REMARK 620 6 HOH A 328 O 88.1 88.1 94.2 102.0 176.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 THR B 35 OG1 85.1 REMARK 620 3 GCP B 201 O1G 173.8 89.0 REMARK 620 4 GCP B 201 O2B 112.9 160.8 73.2 REMARK 620 5 HOH B 304 O 88.6 91.7 93.3 82.6 REMARK 620 6 HOH B 326 O 88.3 88.2 89.8 98.5 176.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GCP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GCP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 DBREF 6QUU A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6QUU B 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 6QUU MET A -17 UNP P01116 INITIATING METHIONINE SEQADV 6QUU HIS A -16 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS A -15 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS A -14 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS A -13 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS A -12 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS A -11 UNP P01116 EXPRESSION TAG SEQADV 6QUU SER A -10 UNP P01116 EXPRESSION TAG SEQADV 6QUU SER A -9 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLY A -8 UNP P01116 EXPRESSION TAG SEQADV 6QUU ARG A -7 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLU A -6 UNP P01116 EXPRESSION TAG SEQADV 6QUU ASN A -5 UNP P01116 EXPRESSION TAG SEQADV 6QUU LEU A -4 UNP P01116 EXPRESSION TAG SEQADV 6QUU TYR A -3 UNP P01116 EXPRESSION TAG SEQADV 6QUU PHE A -2 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLN A -1 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 6QUU ASP A 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 6QUU MET B -17 UNP P01116 INITIATING METHIONINE SEQADV 6QUU HIS B -16 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS B -15 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS B -14 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS B -13 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS B -12 UNP P01116 EXPRESSION TAG SEQADV 6QUU HIS B -11 UNP P01116 EXPRESSION TAG SEQADV 6QUU SER B -10 UNP P01116 EXPRESSION TAG SEQADV 6QUU SER B -9 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLY B -8 UNP P01116 EXPRESSION TAG SEQADV 6QUU ARG B -7 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLU B -6 UNP P01116 EXPRESSION TAG SEQADV 6QUU ASN B -5 UNP P01116 EXPRESSION TAG SEQADV 6QUU LEU B -4 UNP P01116 EXPRESSION TAG SEQADV 6QUU TYR B -3 UNP P01116 EXPRESSION TAG SEQADV 6QUU PHE B -2 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLN B -1 UNP P01116 EXPRESSION TAG SEQADV 6QUU GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 6QUU ASP B 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQRES 1 A 187 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 187 LEU TYR PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL SEQRES 3 A 187 VAL GLY ALA ASP GLY VAL GLY LYS SER ALA LEU THR ILE SEQRES 4 A 187 GLN LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO SEQRES 5 A 187 THR ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP SEQRES 6 A 187 GLY GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY SEQRES 7 A 187 GLN GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG SEQRES 8 A 187 THR GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN SEQRES 9 A 187 THR LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN SEQRES 10 A 187 ILE LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL SEQRES 11 A 187 LEU VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL SEQRES 12 A 187 ASP THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY SEQRES 13 A 187 ILE PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY SEQRES 14 A 187 VAL ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG SEQRES 15 A 187 LYS HIS LYS GLU LYS SEQRES 1 B 187 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 187 LEU TYR PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL SEQRES 3 B 187 VAL GLY ALA ASP GLY VAL GLY LYS SER ALA LEU THR ILE SEQRES 4 B 187 GLN LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO SEQRES 5 B 187 THR ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP SEQRES 6 B 187 GLY GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY SEQRES 7 B 187 GLN GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG SEQRES 8 B 187 THR GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN SEQRES 9 B 187 THR LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN SEQRES 10 B 187 ILE LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL SEQRES 11 B 187 LEU VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL SEQRES 12 B 187 ASP THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY SEQRES 13 B 187 ILE PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY SEQRES 14 B 187 VAL ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG SEQRES 15 B 187 LYS HIS LYS GLU LYS HET GCP A 201 49 HET MG A 202 1 HET GCP B 201 49 HET MG B 202 1 HETNAM GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 GCP 2(C11 H18 N5 O13 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *275(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 SER A 65 5 5 HELIX 3 AA3 MET A 67 GLY A 75 1 9 HELIX 4 AA4 ASN A 86 ASP A 105 1 20 HELIX 5 AA5 ASP A 126 GLY A 138 1 13 HELIX 6 AA6 GLY A 151 LYS A 167 1 17 HELIX 7 AA7 GLY B 15 ASN B 26 1 12 HELIX 8 AA8 GLN B 61 SER B 65 5 5 HELIX 9 AA9 MET B 67 GLY B 75 1 9 HELIX 10 AB1 ASN B 86 ASP B 105 1 20 HELIX 11 AB2 ASP B 126 GLY B 138 1 13 HELIX 12 AB3 GLY B 151 LYS B 167 1 17 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O CYS A 51 N VAL A 44 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 6 GLU B 37 ILE B 46 0 SHEET 2 AA2 6 GLU B 49 THR B 58 -1 O CYS B 51 N VAL B 44 SHEET 3 AA2 6 THR B 2 GLY B 10 1 N TYR B 4 O ASP B 54 SHEET 4 AA2 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 AA2 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA2 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 LINK OG SER A 17 MG MG A 202 1555 1555 2.10 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.09 LINK O1G GCP A 201 MG MG A 202 1555 1555 2.04 LINK O2B GCP A 201 MG MG A 202 1555 1555 4.32 LINK MG MG A 202 O HOH A 317 1555 1555 2.12 LINK MG MG A 202 O HOH A 328 1555 1555 2.08 LINK OG SER B 17 MG MG B 202 1555 1555 2.05 LINK OG1 THR B 35 MG MG B 202 1555 1555 2.06 LINK O1G GCP B 201 MG MG B 202 1555 1555 1.96 LINK O2B GCP B 201 MG MG B 202 1555 1555 4.38 LINK MG MG B 202 O HOH B 304 1555 1555 2.05 LINK MG MG B 202 O HOH B 326 1555 1555 2.13 SITE 1 AC1 29 ASP A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 29 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 29 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 29 PRO A 34 THR A 35 GLY A 60 ASN A 116 SITE 5 AC1 29 LYS A 117 ASP A 119 LEU A 120 SER A 145 SITE 6 AC1 29 ALA A 146 MG A 202 HOH A 317 HOH A 328 SITE 7 AC1 29 HOH A 332 HOH A 343 HOH A 355 HOH A 385 SITE 8 AC1 29 HOH A 398 SITE 1 AC2 5 SER A 17 THR A 35 GCP A 201 HOH A 317 SITE 2 AC2 5 HOH A 328 SITE 1 AC3 30 ALA B 11 ASP B 12 GLY B 13 VAL B 14 SITE 2 AC3 30 GLY B 15 LYS B 16 SER B 17 ALA B 18 SITE 3 AC3 30 PHE B 28 VAL B 29 ASP B 30 GLU B 31 SITE 4 AC3 30 TYR B 32 PRO B 34 THR B 35 GLY B 60 SITE 5 AC3 30 ASN B 116 LYS B 117 ASP B 119 LEU B 120 SITE 6 AC3 30 SER B 145 ALA B 146 MG B 202 HOH B 304 SITE 7 AC3 30 HOH B 315 HOH B 326 HOH B 344 HOH B 381 SITE 8 AC3 30 HOH B 386 HOH B 390 SITE 1 AC4 5 SER B 17 THR B 35 GCP B 201 HOH B 304 SITE 2 AC4 5 HOH B 326 CRYST1 42.619 72.321 54.654 90.00 103.37 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023464 0.000000 0.005577 0.00000 SCALE2 0.000000 0.013827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018807 0.00000 CONECT 243 5380 CONECT 528 5380 CONECT 2905 5430 CONECT 3190 5430 CONECT 5331 5332 5333 5334 5335 CONECT 5332 5331 5380 CONECT 5333 5331 5363 CONECT 5334 5331 CONECT 5335 5331 5336 5364 5365 CONECT 5336 5335 5337 5338 5339 CONECT 5337 5336 CONECT 5338 5336 5366 5380 CONECT 5339 5336 5340 CONECT 5340 5339 5341 5342 5343 CONECT 5341 5340 CONECT 5342 5340 5367 CONECT 5343 5340 5344 CONECT 5344 5343 5345 5368 5369 CONECT 5345 5344 5346 5347 5370 CONECT 5346 5345 5351 CONECT 5347 5345 5348 5349 5371 CONECT 5348 5347 5372 CONECT 5349 5347 5350 5351 5373 CONECT 5350 5349 5374 CONECT 5351 5346 5349 5352 5375 CONECT 5352 5351 5353 5362 CONECT 5353 5352 5354 5376 CONECT 5354 5353 5355 CONECT 5355 5354 5356 5362 CONECT 5356 5355 5357 5358 CONECT 5357 5356 CONECT 5358 5356 5359 5377 CONECT 5359 5358 5360 5361 CONECT 5360 5359 5378 5379 CONECT 5361 5359 5362 CONECT 5362 5352 5355 5361 CONECT 5363 5333 CONECT 5364 5335 CONECT 5365 5335 CONECT 5366 5338 CONECT 5367 5342 CONECT 5368 5344 CONECT 5369 5344 CONECT 5370 5345 CONECT 5371 5347 CONECT 5372 5348 CONECT 5373 5349 CONECT 5374 5350 CONECT 5375 5351 CONECT 5376 5353 CONECT 5377 5358 CONECT 5378 5360 CONECT 5379 5360 CONECT 5380 243 528 5332 5338 CONECT 5380 5447 5458 CONECT 5381 5382 5383 5384 5385 CONECT 5382 5381 5430 CONECT 5383 5381 5413 CONECT 5384 5381 CONECT 5385 5381 5386 5414 5415 CONECT 5386 5385 5387 5388 5389 CONECT 5387 5386 CONECT 5388 5386 5416 5430 CONECT 5389 5386 5390 CONECT 5390 5389 5391 5392 5393 CONECT 5391 5390 CONECT 5392 5390 5417 CONECT 5393 5390 5394 CONECT 5394 5393 5395 5418 5419 CONECT 5395 5394 5396 5397 5420 CONECT 5396 5395 5401 CONECT 5397 5395 5398 5399 5421 CONECT 5398 5397 5422 CONECT 5399 5397 5400 5401 5423 CONECT 5400 5399 5424 CONECT 5401 5396 5399 5402 5425 CONECT 5402 5401 5403 5412 CONECT 5403 5402 5404 5426 CONECT 5404 5403 5405 CONECT 5405 5404 5406 5412 CONECT 5406 5405 5407 5408 CONECT 5407 5406 CONECT 5408 5406 5409 5427 CONECT 5409 5408 5410 5411 CONECT 5410 5409 5428 5429 CONECT 5411 5409 5412 CONECT 5412 5402 5405 5411 CONECT 5413 5383 CONECT 5414 5385 CONECT 5415 5385 CONECT 5416 5388 CONECT 5417 5392 CONECT 5418 5394 CONECT 5419 5394 CONECT 5420 5395 CONECT 5421 5397 CONECT 5422 5398 CONECT 5423 5399 CONECT 5424 5400 CONECT 5425 5401 CONECT 5426 5403 CONECT 5427 5408 CONECT 5428 5410 CONECT 5429 5410 CONECT 5430 2905 3190 5382 5388 CONECT 5430 5575 5597 CONECT 5447 5380 CONECT 5458 5380 CONECT 5575 5430 CONECT 5597 5430 MASTER 390 0 4 12 12 0 20 6 3005 2 110 30 END