HEADER NUCLEAR PROTEIN 01-MAR-19 6QVA TITLE CRYSTAL STRUCTURE OF A CHAD DOMAIN FROM CHLOROBIUM TEPIDUM IN COMPLEX TITLE 2 WITH INORGANIC POLYPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAD DOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROBACULUM TEPIDUM (STRAIN ATCC 49652 / DSM SOURCE 3 12025 / NBRC 103806 / TLS); SOURCE 4 ORGANISM_COMMON: CHLOROBIUM TEPIDUM; SOURCE 5 ORGANISM_TAXID: 194439; SOURCE 6 GENE: CT0884; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMH-HT KEYWDS FOUR-HELIX BUNDLE, INORGANIC POLYPHOSPHATE BINDING PROTEIN, ALL KEYWDS 2 ALPHA-HELICAL PROTEIN, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.LORENZO-ORTS,M.HOTHORN REVDAT 3 24-JAN-24 6QVA 1 REMARK REVDAT 2 05-JUN-19 6QVA 1 JRNL REVDAT 1 29-MAY-19 6QVA 0 JRNL AUTH L.LORENZO-ORTS,U.HOHMANN,J.ZHU,M.HOTHORN JRNL TITL MOLECULAR CHARACTERIZATION OF CHAD DOMAINS AS INORGANIC JRNL TITL 2 POLYPHOSPHATE-BINDING MODULES. JRNL REF LIFE SCI ALLIANCE V. 2 2019 JRNL REFN ESSN 2575-1077 JRNL PMID 31133615 JRNL DOI 10.26508/LSA.201900385 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 21397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1127 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1555 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.4130 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2493 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 1.57000 REMARK 3 B33 (A**2) : -1.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.216 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.427 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2632 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2470 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3562 ; 1.397 ; 1.681 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5703 ; 1.226 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 317 ; 5.133 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;26.250 ;20.125 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 473 ;14.484 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;15.736 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 330 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2883 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 594 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1247 ; 1.860 ; 3.684 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1246 ; 1.859 ; 3.682 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1559 ; 2.529 ; 5.516 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1560 ; 2.528 ; 5.517 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1382 ; 3.307 ; 4.380 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1331 ; 2.873 ; 4.121 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1911 ; 4.444 ; 6.018 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10975 ; 8.580 ;73.852 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 10851 ; 8.418 ;72.247 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 207 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5838 -1.5966 8.6066 REMARK 3 T TENSOR REMARK 3 T11: 0.0956 T22: 0.1778 REMARK 3 T33: 0.0719 T12: -0.0568 REMARK 3 T13: 0.0015 T23: -0.0673 REMARK 3 L TENSOR REMARK 3 L11: 7.1332 L22: 7.4677 REMARK 3 L33: 3.5569 L12: 3.1533 REMARK 3 L13: -2.0785 L23: -0.0346 REMARK 3 S TENSOR REMARK 3 S11: -0.3716 S12: 0.7161 S13: -0.4971 REMARK 3 S21: -0.2859 S22: 0.1892 S23: 0.2233 REMARK 3 S31: 0.4339 S32: -0.6738 S33: 0.1825 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 225 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2093 12.2135 16.6264 REMARK 3 T TENSOR REMARK 3 T11: 0.0052 T22: 0.0375 REMARK 3 T33: 0.0696 T12: 0.0021 REMARK 3 T13: -0.0111 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 5.5701 L22: 0.6442 REMARK 3 L33: 1.9009 L12: -0.3581 REMARK 3 L13: -1.5248 L23: 0.6960 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: 0.1596 S13: -0.0638 REMARK 3 S21: -0.0189 S22: -0.0830 S23: 0.1851 REMARK 3 S31: -0.0260 S32: -0.2598 S33: 0.1222 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 288 A 342 REMARK 3 ORIGIN FOR THE GROUP (A): -1.6837 20.5217 33.4348 REMARK 3 T TENSOR REMARK 3 T11: 0.0498 T22: 0.0198 REMARK 3 T33: 0.0780 T12: 0.0071 REMARK 3 T13: -0.0130 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 3.8008 L22: 0.8297 REMARK 3 L33: 6.9947 L12: -0.6842 REMARK 3 L13: -3.7456 L23: -0.5182 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: 0.1613 S13: 0.0286 REMARK 3 S21: -0.1538 S22: 0.0151 S23: -0.0067 REMARK 3 S31: 0.0269 S32: -0.2995 S33: -0.0868 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 343 A 373 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0183 14.8076 7.8808 REMARK 3 T TENSOR REMARK 3 T11: 0.0783 T22: 0.0676 REMARK 3 T33: 0.0229 T12: 0.0188 REMARK 3 T13: -0.0192 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 7.4057 L22: 3.8847 REMARK 3 L33: 1.2528 L12: -4.4364 REMARK 3 L13: -0.7959 L23: 0.2913 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.1351 S13: -0.0676 REMARK 3 S21: 0.0216 S22: -0.0770 S23: 0.1242 REMARK 3 S31: -0.2715 S32: -0.1958 S33: 0.0560 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 374 A 397 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0888 -3.3353 26.6165 REMARK 3 T TENSOR REMARK 3 T11: 0.0374 T22: 0.1007 REMARK 3 T33: 0.1042 T12: 0.0351 REMARK 3 T13: 0.0105 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.9314 L22: 0.6602 REMARK 3 L33: 11.9364 L12: 0.4764 REMARK 3 L13: -0.6628 L23: -1.2766 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: -0.1768 S13: 0.0428 REMARK 3 S21: 0.0574 S22: 0.0249 S23: -0.0517 REMARK 3 S31: 0.0376 S32: 0.3535 S33: -0.0027 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 398 A 438 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1437 -1.7149 28.8209 REMARK 3 T TENSOR REMARK 3 T11: 0.0274 T22: 0.0397 REMARK 3 T33: 0.1479 T12: 0.0089 REMARK 3 T13: 0.0191 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 2.7113 L22: 3.3312 REMARK 3 L33: 6.2526 L12: 0.3322 REMARK 3 L13: -1.0445 L23: 2.6951 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: -0.3026 S13: -0.1436 REMARK 3 S21: 0.2380 S22: -0.0108 S23: 0.0012 REMARK 3 S31: 0.0297 S32: 0.0215 S33: 0.0063 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 439 A 521 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8351 6.2803 41.0243 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0573 REMARK 3 T33: 0.0525 T12: 0.0122 REMARK 3 T13: -0.0064 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 2.3631 L22: 5.3219 REMARK 3 L33: 2.3824 L12: -3.1430 REMARK 3 L13: -1.9315 L23: 3.1197 REMARK 3 S TENSOR REMARK 3 S11: -0.0243 S12: -0.1001 S13: -0.1834 REMARK 3 S21: 0.0329 S22: 0.0009 S23: 0.0390 REMARK 3 S31: 0.1742 S32: 0.0743 S33: 0.0234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QVA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292100941. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22776 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 19.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14900 REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 2.26000 REMARK 200 FOR SHELL : 1.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3E0S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M (NH4)3PO4, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.70000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.51550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.19850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.70000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.51550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.19850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.70000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.51550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.19850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.70000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.51550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.19850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 106.39700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 205 REMARK 465 ALA A 206 REMARK 465 MET A 207 REMARK 465 ALA A 208 REMARK 465 SER A 209 REMARK 465 LYS A 210 REMARK 465 LEU A 211 REMARK 465 ALA A 522 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 212 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 374 OE2 GLU A 374 2655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 269 40.94 -107.78 REMARK 500 THR A 402 62.86 38.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9PI A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3PO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 607 DBREF 6QVA A 209 522 UNP Q8KE09 Q8KE09_CHLTE 209 522 SEQADV 6QVA GLY A 205 UNP Q8KE09 EXPRESSION TAG SEQADV 6QVA ALA A 206 UNP Q8KE09 EXPRESSION TAG SEQADV 6QVA MET A 207 UNP Q8KE09 EXPRESSION TAG SEQADV 6QVA ALA A 208 UNP Q8KE09 EXPRESSION TAG SEQRES 1 A 318 GLY ALA MET ALA SER LYS LEU ARG LEU GLN LEU ASP ALA SEQRES 2 A 318 HIS ALA SER ILE HIS GLU ASN VAL ARG ARG LEU LEU GLN SEQRES 3 A 318 PHE THR THR SER ILE MET GLU ALA ASN GLU GLU GLY ILE SEQRES 4 A 318 ARG LYS ASP ILE ASP SER GLU PHE LEU HIS ASP PHE ARG SEQRES 5 A 318 VAL ALA ILE ARG ARG SER ARG SER ILE LEU ARG LEU LEU SEQRES 6 A 318 ASN GLY VAL PHE ASP PRO GLU LYS THR ALA TRP MET LEU SEQRES 7 A 318 ALA GLY LEU ARG GLU LEU GLY LYS ARG THR ASN ASP LEU SEQRES 8 A 318 ARG ASP SER ASP VAL TYR LEU LEU ARG ARG GLU GLU TYR SEQRES 9 A 318 THR SER LEU LEU PRO PRO SER LEU ARG PRO ALA LEU ASP SEQRES 10 A 318 PRO PHE PHE SER ASP LEU GLU ALA ASP LYS ARG LEU HIS SEQRES 11 A 318 HIS ARG GLN PHE CYS ARG TYR LEU THR GLY ARG GLU TYR SEQRES 12 A 318 SER GLY PHE MET THR SER LEU LYS GLU PHE ILE ALA GLU SEQRES 13 A 318 GLY GLU LEU PRO ASP PRO GLU THR ALA PRO LEU ALA ALA SEQRES 14 A 318 GLU PRO THR GLY ASP VAL ALA ALA LYS THR ILE ARG LYS SEQRES 15 A 318 ALA LEU LYS LYS VAL LEU VAL HIS GLY ARG ARG THR GLY SEQRES 16 A 318 SER GLU THR SER ASP ALA GLU LEU HIS GLU LEU ARG ILE SEQRES 17 A 318 ASP CYS LYS LYS LEU ARG TYR LEU LEU GLU PHE PHE ALA SEQRES 18 A 318 SER LEU PHE PRO PRO LYS ALA THR ALA GLN VAL LEU ARG SEQRES 19 A 318 GLN MET LYS THR LEU GLN ASP ASN LEU GLY THR PHE VAL SEQRES 20 A 318 ASP LEU THR VAL GLN MET GLU PHE LEU GLN SER ARG LEU SEQRES 21 A 318 GLU THR ILE PRO ALA ASP ARG GLY GLY ILE SER GLU ALA SEQRES 22 A 318 ALA ALA ILE GLY GLY LEU LEU THR THR LEU TYR ARG LYS SEQRES 23 A 318 ARG GLU LYS VAL ARG GLU HIS PHE HIS GLU ILE PHE SER SEQRES 24 A 318 GLY PHE ASP SER ASN GLU THR GLY GLU LEU PHE ASP GLU SEQRES 25 A 318 LEU LEU THR GLY LEU ALA HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET 9PI A 605 37 HET 3PO A 606 13 HET PO4 A 607 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM 9PI BIS[OXIDANYL-[OXIDANYL-[OXIDANYL(PHOSPHONOOXY) HETNAM 2 9PI PHOSPHORYL]OXY-PHOSPHORYL]OXY-PHOSPHORYL] HYDROGEN HETNAM 3 9PI PHOSPHATE HETNAM 3PO TRIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 4(C2 H6 O2) FORMUL 6 9PI H11 O28 P9 FORMUL 7 3PO H5 O10 P3 FORMUL 8 PO4 O4 P 3- FORMUL 9 HOH *68(H2 O) HELIX 1 AA1 SER A 220 LYS A 245 1 26 HELIX 2 AA2 SER A 249 LEU A 269 1 21 HELIX 3 AA3 ASP A 274 ARG A 304 1 31 HELIX 4 AA4 ARG A 304 LEU A 312 1 9 HELIX 5 AA5 PRO A 313 PRO A 318 5 6 HELIX 6 AA6 ALA A 319 GLY A 344 1 26 HELIX 7 AA7 GLY A 344 ALA A 359 1 16 HELIX 8 AA8 PRO A 375 THR A 398 1 24 HELIX 9 AA9 SER A 403 ALA A 425 1 23 HELIX 10 AB1 SER A 426 PHE A 428 5 3 HELIX 11 AB2 PRO A 429 THR A 466 1 38 HELIX 12 AB3 ASP A 470 ASP A 506 1 37 HELIX 13 AB4 SER A 507 LEU A 518 1 12 SITE 1 AC1 4 GLU A 287 TYR A 341 PHE A 350 HOH A 727 SITE 1 AC2 4 ASP A 246 ASP A 248 LEU A 252 ASP A 299 SITE 1 AC3 7 ASP A 274 GLU A 276 PRO A 468 GLY A 472 SITE 2 AC3 7 GLY A 473 GLU A 476 HOH A 758 SITE 1 AC4 5 GLU A 360 GLU A 362 ASP A 470 GLY A 472 SITE 2 AC4 5 HOH A 713 SITE 1 AC5 10 HIS A 253 ARG A 256 VAL A 257 ARG A 260 SITE 2 AC5 10 ARG A 296 LYS A 415 ARG A 418 GLU A 422 SITE 3 AC5 10 HOH A 701 HOH A 742 SITE 1 AC6 3 LYS A 386 LYS A 389 HIS A 394 SITE 1 AC7 6 SER A 220 HIS A 222 GLU A 223 ARG A 226 SITE 2 AC7 6 GLY A 361 HOH A 737 CRYST1 69.400 97.031 106.397 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014409 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009399 0.00000