HEADER TRANSFERASE 07-MAR-19 6QXR TITLE 4'-PHOSPHOPANTETHEINYL TRANSFERASE PPTAB FROM MYCOBACTERIUM ABSCESSUS TITLE 2 AT PH 8.5 WITH MN2+ AND COA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: POSSIBLE 4'-PHOSPHOPANTETHEINYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM ABSCESSUS (STRAIN ATCC 19977 / SOURCE 3 DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543); SOURCE 4 ORGANISM_TAXID: 561007; SOURCE 5 GENE: MAB_3117C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.NGUYEN,L.MOUREY,J.D.PEDELACQ REVDAT 3 24-JAN-24 6QXR 1 REMARK REVDAT 2 11-NOV-20 6QXR 1 JRNL LINK REVDAT 1 25-MAR-20 6QXR 0 JRNL AUTH M.C.NGUYEN,O.SAUREL,C.CARIVENC,S.GAVALDA,S.SAITTA,M.P.TRAN, JRNL AUTH 2 A.MILON,C.CHALUT,C.GUILHOT,L.MOUREY,J.D.PEDELACQ JRNL TITL CONFORMATIONAL FLEXIBILITY OF COENZYME A AND ITS IMPACT ON JRNL TITL 2 THE POST-TRANSLATIONAL MODIFICATION OF ACYL CARRIER PROTEINS JRNL TITL 3 BY 4'-PHOSPHOPANTETHEINYL TRANSFERASES. JRNL REF FEBS J. V. 287 4729 2020 JRNL REFN ISSN 1742-464X JRNL PMID 32128972 JRNL DOI 10.1111/FEBS.15273 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 68693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.360 REMARK 3 FREE R VALUE TEST SET COUNT : 2959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7500 - 3.3103 0.87 5448 134 0.1323 0.1658 REMARK 3 2 3.3103 - 2.6276 0.92 5797 131 0.1366 0.1406 REMARK 3 3 2.6276 - 2.2954 0.87 5478 126 0.1390 0.1629 REMARK 3 4 2.2954 - 2.0856 0.92 5779 140 0.1389 0.1518 REMARK 3 5 2.0856 - 1.9361 0.94 5946 147 0.1438 0.1838 REMARK 3 6 1.9361 - 1.8219 0.95 5969 135 0.1532 0.1469 REMARK 3 7 1.8219 - 1.7307 0.90 5589 142 0.1591 0.1520 REMARK 3 8 1.7307 - 1.6553 0.94 5914 142 0.1622 0.2088 REMARK 3 9 1.6553 - 1.5916 0.95 5984 143 0.1587 0.1701 REMARK 3 10 1.5916 - 1.5367 0.97 6062 148 0.1619 0.1834 REMARK 3 11 1.5367 - 1.4886 0.97 6073 148 0.1715 0.1876 REMARK 3 12 1.4886 - 1.4461 0.91 5701 135 0.1904 0.2047 REMARK 3 13 1.4461 - 1.4080 0.94 5885 137 0.2042 0.2137 REMARK 3 14 1.4080 - 1.3737 0.95 5966 148 0.2077 0.2271 REMARK 3 15 1.3737 - 1.3424 0.96 5987 142 0.2251 0.2706 REMARK 3 16 1.3424 - 1.3139 0.96 6023 151 0.2340 0.2785 REMARK 3 17 1.3139 - 1.2876 0.93 5810 139 0.2445 0.2454 REMARK 3 18 1.2876 - 1.2633 0.91 5691 138 0.2556 0.2646 REMARK 3 19 1.2633 - 1.2407 0.93 5854 150 0.2681 0.2737 REMARK 3 20 1.2407 - 1.2197 0.93 5867 139 0.2776 0.3020 REMARK 3 21 1.2197 - 1.2000 0.93 5777 144 0.2904 0.2957 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.5683 69.3238 -4.1530 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.0944 REMARK 3 T33: 0.1524 T12: 0.0256 REMARK 3 T13: -0.0083 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 6.9149 L22: 7.3253 REMARK 3 L33: 7.3991 L12: 0.1258 REMARK 3 L13: 1.1158 L23: 1.7276 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: -0.1570 S13: 0.6339 REMARK 3 S21: -0.1480 S22: -0.0764 S23: 0.2292 REMARK 3 S31: -0.5735 S32: -0.1056 S33: 0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8628 55.2644 -7.2656 REMARK 3 T TENSOR REMARK 3 T11: 0.1184 T22: 0.1789 REMARK 3 T33: 0.1588 T12: -0.0186 REMARK 3 T13: -0.0123 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.9233 L22: 2.1013 REMARK 3 L33: 3.7188 L12: 1.4822 REMARK 3 L13: 1.7925 L23: 2.7785 REMARK 3 S TENSOR REMARK 3 S11: -0.0395 S12: -0.2075 S13: 0.1150 REMARK 3 S21: -0.0649 S22: -0.0200 S23: 0.3167 REMARK 3 S31: 0.1455 S32: -0.1170 S33: 0.0241 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1793 42.6758 -6.5343 REMARK 3 T TENSOR REMARK 3 T11: 0.1699 T22: 0.1314 REMARK 3 T33: 0.1787 T12: -0.0101 REMARK 3 T13: 0.0081 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 4.0667 L22: 4.3904 REMARK 3 L33: 5.1210 L12: 1.7792 REMARK 3 L13: -1.7732 L23: -2.0096 REMARK 3 S TENSOR REMARK 3 S11: -0.0972 S12: 0.0073 S13: -0.4672 REMARK 3 S21: -0.0796 S22: -0.1335 S23: -0.0484 REMARK 3 S31: 0.2811 S32: -0.0872 S33: 0.0618 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6800 50.6804 -3.5043 REMARK 3 T TENSOR REMARK 3 T11: 0.1017 T22: 0.1232 REMARK 3 T33: 0.0945 T12: -0.0221 REMARK 3 T13: -0.0033 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 6.5962 L22: 7.4126 REMARK 3 L33: 8.6783 L12: 5.1488 REMARK 3 L13: -4.9818 L23: -6.2599 REMARK 3 S TENSOR REMARK 3 S11: -0.0771 S12: -0.0255 S13: -0.2704 REMARK 3 S21: 0.0067 S22: 0.0525 S23: 0.0968 REMARK 3 S31: 0.2793 S32: -0.2838 S33: -0.0186 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3183 55.8442 -12.3114 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.0994 REMARK 3 T33: 0.0686 T12: -0.0090 REMARK 3 T13: 0.0022 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 3.4181 L22: 6.0336 REMARK 3 L33: 5.7968 L12: -0.4218 REMARK 3 L13: 0.9806 L23: -3.7656 REMARK 3 S TENSOR REMARK 3 S11: 0.0115 S12: 0.1376 S13: -0.0242 REMARK 3 S21: -0.2575 S22: 0.0813 S23: 0.0814 REMARK 3 S31: 0.2082 S32: -0.1271 S33: -0.1120 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.0026 58.9064 0.3679 REMARK 3 T TENSOR REMARK 3 T11: 0.0809 T22: 0.0716 REMARK 3 T33: 0.0781 T12: -0.0002 REMARK 3 T13: -0.0049 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.7533 L22: 1.0039 REMARK 3 L33: 2.7113 L12: 0.2218 REMARK 3 L13: -0.5432 L23: 0.4985 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: 0.0172 S13: 0.0129 REMARK 3 S21: 0.0147 S22: -0.0541 S23: 0.0099 REMARK 3 S31: 0.0210 S32: -0.0354 S33: 0.0423 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.4892 59.9675 23.4962 REMARK 3 T TENSOR REMARK 3 T11: 0.1768 T22: 0.1400 REMARK 3 T33: 0.1278 T12: -0.0187 REMARK 3 T13: 0.0369 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 9.2797 L22: 3.6114 REMARK 3 L33: 4.1751 L12: 1.0343 REMARK 3 L13: 2.3629 L23: 1.5420 REMARK 3 S TENSOR REMARK 3 S11: 0.1245 S12: -0.4959 S13: -0.4856 REMARK 3 S21: 0.2819 S22: -0.0974 S23: 0.0823 REMARK 3 S31: 0.3712 S32: -0.0988 S33: -0.0716 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.6788 62.5032 14.8718 REMARK 3 T TENSOR REMARK 3 T11: 0.0862 T22: 0.0719 REMARK 3 T33: 0.0792 T12: -0.0148 REMARK 3 T13: 0.0063 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.0806 L22: 1.4534 REMARK 3 L33: 1.8235 L12: -1.6140 REMARK 3 L13: -1.6554 L23: 1.2902 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.1579 S13: 0.0470 REMARK 3 S21: 0.1172 S22: 0.0081 S23: 0.0428 REMARK 3 S31: 0.0164 S32: 0.0219 S33: 0.0624 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.2359 66.5755 13.4111 REMARK 3 T TENSOR REMARK 3 T11: 0.1047 T22: 0.0825 REMARK 3 T33: 0.1060 T12: -0.0272 REMARK 3 T13: 0.0025 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 6.2446 L22: 2.3187 REMARK 3 L33: 1.6012 L12: -2.6366 REMARK 3 L13: -0.2047 L23: -0.2634 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: -0.1752 S13: 0.1686 REMARK 3 S21: 0.1007 S22: 0.0988 S23: -0.0027 REMARK 3 S31: -0.0930 S32: 0.0790 S33: -0.0165 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.5066 68.1097 7.1393 REMARK 3 T TENSOR REMARK 3 T11: 0.1214 T22: 0.0908 REMARK 3 T33: 0.1009 T12: 0.0006 REMARK 3 T13: 0.0109 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 9.6954 L22: 1.3922 REMARK 3 L33: 1.1065 L12: -1.3686 REMARK 3 L13: 0.2690 L23: -0.0333 REMARK 3 S TENSOR REMARK 3 S11: 0.1059 S12: 0.2895 S13: 0.3359 REMARK 3 S21: -0.0478 S22: -0.0789 S23: 0.0665 REMARK 3 S31: -0.0771 S32: -0.0010 S33: 0.0040 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.6841 68.8284 0.8972 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.2237 REMARK 3 T33: 0.2969 T12: -0.0586 REMARK 3 T13: 0.0482 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 7.3622 L22: 3.4885 REMARK 3 L33: 4.4148 L12: 3.9374 REMARK 3 L13: -3.9690 L23: -1.6803 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: -0.2663 S13: 0.0228 REMARK 3 S21: -0.1911 S22: -0.0258 S23: -0.7082 REMARK 3 S31: -0.2717 S32: 0.7492 S33: 0.0915 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QXR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072270 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : TRUNCATE REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68697 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 44.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 44.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4U89 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS 25 % PEG 4K 0.2 M CACL2, PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.68050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.18250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.29450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.18250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.68050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.29450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 VAL A 3 REMARK 465 THR A 4 REMARK 465 LEU A 225 REMARK 465 GLU A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASP A 5 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 132 CZ ARG A 132 NH1 0.087 REMARK 500 ARG A 132 CZ ARG A 132 NH2 0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 804 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 805 DISTANCE = 6.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 90 O REMARK 620 2 HIS A 90 ND1 86.8 REMARK 620 3 COA A 301 O2A 103.7 91.1 REMARK 620 4 HOH A 453 O 160.2 82.4 93.1 REMARK 620 5 HOH A 493 O 81.0 94.1 173.1 83.2 REMARK 620 6 HOH A 548 O 78.0 162.6 84.3 114.6 92.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 111 OD1 REMARK 620 2 ASP A 111 OD2 51.7 REMARK 620 3 GLU A 113 OE2 135.3 85.2 REMARK 620 4 GLU A 153 OE1 93.0 95.6 103.8 REMARK 620 5 COA A 301 O3A 78.7 130.3 143.4 83.7 REMARK 620 6 HOH A 417 O 92.5 99.3 82.3 164.3 83.0 REMARK 620 7 HOH A 522 O 147.8 159.1 76.7 78.9 69.6 88.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 606 O REMARK 620 2 HOH A 631 O 105.9 REMARK 620 3 HOH A 697 O 127.3 91.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6QWU RELATED DB: PDB REMARK 900 PPTAB AT PH 5.5 WITH MN2+ AND COA. REMARK 900 RELATED ID: 6QXQ RELATED DB: PDB REMARK 900 PPTAB AT PH 7 WITH MN2+ AND COA. REMARK 900 RELATED ID: 6QYF RELATED DB: PDB REMARK 900 PPTAB AT PH 5.6 WITH MG2+ AND COA. REMARK 900 RELATED ID: 6QYG RELATED DB: PDB REMARK 900 PPTAB AT PH 8.5 WITH MG2+ AND COA. REMARK 900 RELATED ID: 6RCX RELATED DB: PDB REMARK 900 PPTAB-ACP COMPLEX AT PH 6.5 WITH MN2+ AND COA. DBREF 6QXR A 1 219 UNP B1MD73 B1MD73_MYCA9 1 219 SEQADV 6QXR LYS A 220 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR LEU A 221 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR ALA A 222 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR ALA A 223 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR ALA A 224 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR LEU A 225 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR GLU A 226 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 227 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 228 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 229 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 230 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 231 UNP B1MD73 EXPRESSION TAG SEQADV 6QXR HIS A 232 UNP B1MD73 EXPRESSION TAG SEQRES 1 A 232 MET PRO VAL THR ASP GLN LEU ILE ALA SER VAL VAL PRO SEQRES 2 A 232 GLU LEU LEU PRO SER ALA GLU LEU TYR GLU ASP PRO PRO SEQRES 3 A 232 GLY LEU GLU PRO LEU PRO GLU GLU GLU PRO LEU ILE ALA SEQRES 4 A 232 LYS SER VAL ALA LYS ARG ARG ASN GLU PHE ILE THR VAL SEQRES 5 A 232 ARG TYR CYS ALA ARG GLN ALA LEU SER VAL LEU GLY ILE SEQRES 6 A 232 PRO GLU VAL PRO ILE LEU LYS GLY ASP LYS GLY GLN PRO SEQRES 7 A 232 LEU TRP PRO ASP GLY ILE VAL GLY SER MET THR HIS THR SEQRES 8 A 232 GLU GLY PHE ARG GLY ALA VAL VAL GLY ARG THR GLY GLU SEQRES 9 A 232 VAL ARG SER VAL GLY ILE ASP ALA GLU PRO HIS ASP VAL SEQRES 10 A 232 LEU PRO ASN GLY VAL LEU LYS SER ILE ALA LEU PRO VAL SEQRES 11 A 232 GLU ARG ASP GLU LEU ASP ALA LEU PRO ALA GLY THR HIS SEQRES 12 A 232 TRP ASP ARG LEU LEU PHE CYS ALA LYS GLU THR THR TYR SEQRES 13 A 232 LYS ALA TRP PHE PRO LEU THR ALA ARG TRP LEU GLY PHE SEQRES 14 A 232 GLU ASP ALA HIS ILE THR ILE ASP PRO ASP GLY THR PHE SEQRES 15 A 232 THR SER ARG ILE LEU VAL ASP GLY ARG ALA ASN ASP GLY SEQRES 16 A 232 THR VAL LEU SER ALA PHE ASP GLY ARG TRP ILE ILE ASP SEQRES 17 A 232 LYS GLY LEU ILE LEU THR ALA ILE VAL VAL PRO LYS LEU SEQRES 18 A 232 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS HET COA A 301 37 HET MN A 302 1 HET MN A 303 1 HET CA A 304 1 HETNAM COA COENZYME A HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION FORMUL 2 COA C21 H36 N7 O16 P3 S FORMUL 3 MN 2(MN 2+) FORMUL 5 CA CA 2+ FORMUL 6 HOH *405(H2 O) HELIX 1 AA1 LEU A 7 VAL A 11 5 5 HELIX 2 AA2 LEU A 31 GLU A 33 5 3 HELIX 3 AA3 GLU A 34 ALA A 39 1 6 HELIX 4 AA4 VAL A 42 LEU A 63 1 22 HELIX 5 AA5 GLY A 121 ALA A 127 1 7 HELIX 6 AA6 LEU A 128 LEU A 138 1 11 HELIX 7 AA7 HIS A 143 ALA A 164 1 22 HELIX 8 AA8 GLY A 168 GLU A 170 5 3 SHEET 1 AA1 3 SER A 18 LEU A 21 0 SHEET 2 AA1 3 PHE A 94 ARG A 101 -1 O ARG A 95 N LEU A 21 SHEET 3 AA1 3 ILE A 84 THR A 91 -1 N VAL A 85 O GLY A 100 SHEET 1 AA2 2 LEU A 71 LYS A 72 0 SHEET 2 AA2 2 PRO A 78 LEU A 79 -1 O LEU A 79 N LEU A 71 SHEET 1 AA3 5 VAL A 105 PRO A 114 0 SHEET 2 AA3 5 LEU A 211 PRO A 219 -1 O ILE A 212 N GLU A 113 SHEET 3 AA3 5 ALA A 200 ASP A 208 -1 N ILE A 206 O LEU A 213 SHEET 4 AA3 5 THR A 181 ILE A 186 -1 N PHE A 182 O GLY A 203 SHEET 5 AA3 5 ALA A 172 ASP A 177 -1 N HIS A 173 O ARG A 185 LINK O HIS A 90 MN MN A 303 1555 1555 2.29 LINK ND1 HIS A 90 MN MN A 303 1555 1555 2.42 LINK OD1 ASP A 111 MN MN A 302 1555 1555 2.45 LINK OD2 ASP A 111 MN MN A 302 1555 1555 2.56 LINK OE2 GLU A 113 MN MN A 302 1555 1555 2.36 LINK OE1 GLU A 153 MN MN A 302 1555 1555 2.24 LINK O3A COA A 301 MN MN A 302 1555 1555 2.35 LINK O2A COA A 301 MN MN A 303 1555 1555 2.12 LINK MN MN A 302 O HOH A 417 1555 1555 2.36 LINK MN MN A 302 O HOH A 522 1555 1555 2.54 LINK MN MN A 303 O HOH A 453 1555 1555 2.31 LINK MN MN A 303 O HOH A 493 1555 1555 2.26 LINK MN MN A 303 O HOH A 548 1555 1555 2.21 LINK CA CA A 304 O HOH A 606 1555 1555 3.03 LINK CA CA A 304 O HOH A 631 1555 1555 2.99 LINK CA CA A 304 O HOH A 697 1555 4565 3.09 SITE 1 AC1 27 ARG A 45 ARG A 53 LYS A 72 LYS A 75 SITE 2 AC1 27 GLY A 76 GLN A 77 PRO A 78 MET A 88 SITE 3 AC1 27 THR A 89 HIS A 90 ASP A 111 GLU A 153 SITE 4 AC1 27 TYR A 156 LYS A 157 PHE A 160 MN A 302 SITE 5 AC1 27 MN A 303 HOH A 406 HOH A 417 HOH A 419 SITE 6 AC1 27 HOH A 467 HOH A 468 HOH A 497 HOH A 522 SITE 7 AC1 27 HOH A 548 HOH A 577 HOH A 596 SITE 1 AC2 6 ASP A 111 GLU A 113 GLU A 153 COA A 301 SITE 2 AC2 6 HOH A 417 HOH A 522 SITE 1 AC3 5 HIS A 90 COA A 301 HOH A 453 HOH A 493 SITE 2 AC3 5 HOH A 548 SITE 1 AC4 7 ALA A 43 ASP A 74 LYS A 75 GLN A 77 SITE 2 AC4 7 HOH A 606 HOH A 631 HOH A 697 CRYST1 55.361 60.589 66.365 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018063 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016505 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015068 0.00000