HEADER SIGNALING PROTEIN 11-MAR-19 6QZL TITLE STRUCTURE OF THE H1 DOMAIN OF HUMAN KCTD12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD12; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: PFETIN,PREDOMINANTLY FETAL EXPRESSED T1 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KCTD12, C13ORF2, KIAA1778, PFET1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KCTD12, H1, CTD, C-TERMINAL DOMAIN, GABAB, GABABR2, STRUCTURAL KEYWDS 2 GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.M.PINKAS,J.C.BUFTON,A.E.FOX,J.A.NEWMAN,K.KUPINSKA,N.A.BURGESS- AUTHOR 2 BROWN,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.N.BULLOCK, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 24-JAN-24 6QZL 1 REMARK REVDAT 2 10-JUL-19 6QZL 1 REMARK REVDAT 1 20-MAR-19 6QZL 0 JRNL AUTH D.M.PINKAS,J.C.BUFTON,A.E.FOX,J.A.NEWMAN,K.KUPINSKA, JRNL AUTH 2 N.A.BURGESS-BROWN,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 3 C.BOUNTRA,A.N.BULLOCK JRNL TITL STRUCTURE OF THE H1 DOMAIN OF HUMAN KCTD12 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7781 - 4.9877 1.00 2725 135 0.2278 0.2843 REMARK 3 2 4.9877 - 3.9594 1.00 2622 120 0.1696 0.1763 REMARK 3 3 3.9594 - 3.4591 1.00 2607 143 0.1814 0.1986 REMARK 3 4 3.4591 - 3.1429 1.00 2562 137 0.1868 0.2500 REMARK 3 5 3.1429 - 2.9176 1.00 2543 151 0.2085 0.2429 REMARK 3 6 2.9176 - 2.7456 1.00 2545 138 0.2187 0.2815 REMARK 3 7 2.7456 - 2.6081 1.00 2556 146 0.2201 0.3134 REMARK 3 8 2.6081 - 2.4946 1.00 2572 123 0.2296 0.3401 REMARK 3 9 2.4946 - 2.3986 1.00 2509 144 0.2323 0.2981 REMARK 3 10 2.3986 - 2.3158 0.99 2517 129 0.2225 0.2936 REMARK 3 11 2.3158 - 2.2434 0.99 2531 129 0.2260 0.2799 REMARK 3 12 2.2434 - 2.1793 0.99 2508 116 0.2414 0.2832 REMARK 3 13 2.1793 - 2.1219 0.99 2503 144 0.2351 0.2972 REMARK 3 14 2.1219 - 2.0701 0.99 2498 161 0.2612 0.3127 REMARK 3 15 2.0701 - 2.0231 0.99 2528 140 0.2675 0.3531 REMARK 3 16 2.0231 - 1.9800 0.99 2488 125 0.2634 0.2745 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3899 REMARK 3 ANGLE : 0.770 5253 REMARK 3 CHIRALITY : 0.049 564 REMARK 3 PLANARITY : 0.004 671 REMARK 3 DIHEDRAL : 16.685 2285 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 45.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6QB7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG SMEAR BROAD -- 0.1M REMARK 280 CITRATE/PHOSPHATE PH 5.7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.13000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.13000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.16000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.68000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.16000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.68000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.13000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.16000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.68000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.13000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.16000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.68000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 429 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 200 REMARK 465 MET A 201 REMARK 465 ASP A 202 REMARK 465 GLY A 203 REMARK 465 GLY A 221 REMARK 465 ARG A 222 REMARK 465 ASP A 223 REMARK 465 ALA A 224 REMARK 465 GLN A 225 REMARK 465 ALA A 226 REMARK 465 ASP A 227 REMARK 465 ALA A 228 REMARK 465 LYS A 229 REMARK 465 PHE A 230 REMARK 465 ALA A 303 REMARK 465 SER A 304 REMARK 465 SER A 305 REMARK 465 THR A 306 REMARK 465 ASP A 307 REMARK 465 GLN A 308 REMARK 465 SER A 309 REMARK 465 GLU A 310 REMARK 465 ASP A 311 REMARK 465 SER B 200 REMARK 465 MET B 201 REMARK 465 ASP B 202 REMARK 465 GLY B 203 REMARK 465 THR B 219 REMARK 465 ILE B 220 REMARK 465 GLY B 221 REMARK 465 ARG B 222 REMARK 465 ASP B 223 REMARK 465 ALA B 224 REMARK 465 GLN B 225 REMARK 465 ALA B 226 REMARK 465 ASP B 227 REMARK 465 ALA B 228 REMARK 465 LYS B 229 REMARK 465 PHE B 230 REMARK 465 CYS B 300 REMARK 465 ALA B 301 REMARK 465 PHE B 302 REMARK 465 ALA B 303 REMARK 465 SER B 304 REMARK 465 SER B 305 REMARK 465 THR B 306 REMARK 465 ASP B 307 REMARK 465 GLN B 308 REMARK 465 SER B 309 REMARK 465 GLU B 310 REMARK 465 ASP B 311 REMARK 465 SER C 200 REMARK 465 MET C 201 REMARK 465 ASP C 202 REMARK 465 GLY C 203 REMARK 465 SER C 204 REMARK 465 THR C 219 REMARK 465 ILE C 220 REMARK 465 GLY C 221 REMARK 465 ARG C 222 REMARK 465 ASP C 223 REMARK 465 ALA C 224 REMARK 465 GLN C 225 REMARK 465 ALA C 226 REMARK 465 ASP C 227 REMARK 465 ALA C 228 REMARK 465 PHE C 302 REMARK 465 ALA C 303 REMARK 465 SER C 304 REMARK 465 SER C 305 REMARK 465 THR C 306 REMARK 465 ASP C 307 REMARK 465 GLN C 308 REMARK 465 SER C 309 REMARK 465 GLU C 310 REMARK 465 ASP C 311 REMARK 465 LYS C 312 REMARK 465 SER D 200 REMARK 465 MET D 201 REMARK 465 ASP D 202 REMARK 465 GLY D 203 REMARK 465 TYR D 218 REMARK 465 THR D 219 REMARK 465 ILE D 220 REMARK 465 GLY D 221 REMARK 465 ARG D 222 REMARK 465 ASP D 223 REMARK 465 ALA D 224 REMARK 465 GLN D 225 REMARK 465 ALA D 226 REMARK 465 ASP D 227 REMARK 465 ALA D 228 REMARK 465 CYS D 300 REMARK 465 ALA D 301 REMARK 465 PHE D 302 REMARK 465 ALA D 303 REMARK 465 SER D 304 REMARK 465 SER D 305 REMARK 465 THR D 306 REMARK 465 ASP D 307 REMARK 465 GLN D 308 REMARK 465 SER D 309 REMARK 465 GLU D 310 REMARK 465 ASP D 311 REMARK 465 LYS D 312 REMARK 465 ILE D 313 REMARK 465 TRP D 314 REMARK 465 SER E 200 REMARK 465 MET E 201 REMARK 465 ASP E 202 REMARK 465 GLY E 203 REMARK 465 TYR E 218 REMARK 465 THR E 219 REMARK 465 ILE E 220 REMARK 465 GLY E 221 REMARK 465 ARG E 222 REMARK 465 ASP E 223 REMARK 465 ALA E 224 REMARK 465 GLN E 225 REMARK 465 ALA E 226 REMARK 465 ASP E 227 REMARK 465 ALA E 228 REMARK 465 LYS E 229 REMARK 465 PHE E 230 REMARK 465 PRO E 259 REMARK 465 ASP E 260 REMARK 465 ARG E 261 REMARK 465 PHE E 302 REMARK 465 ALA E 303 REMARK 465 SER E 304 REMARK 465 SER E 305 REMARK 465 THR E 306 REMARK 465 ASP E 307 REMARK 465 GLN E 308 REMARK 465 SER E 309 REMARK 465 GLU E 310 REMARK 465 ASP E 311 REMARK 465 LYS E 312 REMARK 465 ILE E 313 REMARK 465 TRP E 314 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 215 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 232 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 233 CG1 CG2 REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 261 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 265 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 302 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 ILE A 313 CG1 CG2 CD1 REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 232 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 257 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 470 LYS B 312 CG CD CE NZ REMARK 470 ILE B 313 CG1 CG2 CD1 REMARK 470 LYS C 229 CG CD CE NZ REMARK 470 ARG C 232 CG CD NE CZ NH1 NH2 REMARK 470 THR C 299 OG1 CG2 REMARK 470 CYS C 300 SG REMARK 470 ILE C 313 CG1 CG2 CD1 REMARK 470 TRP C 314 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 314 CZ3 CH2 REMARK 470 ARG D 205 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 206 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 229 CG CD CE NZ REMARK 470 ARG D 232 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 257 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 265 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 205 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 215 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 232 CG CD NE CZ NH1 NH2 REMARK 470 VAL E 233 CG1 CG2 REMARK 470 ARG E 235 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 257 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 264 CG CD OE1 OE2 REMARK 470 CYS E 300 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 325 O HOH D 401 2.06 REMARK 500 NH2 ARG C 205 O HOH C 401 2.14 REMARK 500 O HOH C 434 O HOH C 438 2.19 REMARK 500 O ARG A 205 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 258 81.54 -154.96 REMARK 500 ASP B 258 61.33 -158.67 REMARK 500 ASP C 258 63.38 -156.64 REMARK 500 ARG D 206 41.28 -102.30 REMARK 500 ALA D 234 -60.87 -90.33 REMARK 500 ARG E 205 -60.90 -100.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 6QZL A 202 325 UNP Q96CX2 KCD12_HUMAN 202 325 DBREF 6QZL B 202 325 UNP Q96CX2 KCD12_HUMAN 202 325 DBREF 6QZL C 202 325 UNP Q96CX2 KCD12_HUMAN 202 325 DBREF 6QZL D 202 325 UNP Q96CX2 KCD12_HUMAN 202 325 DBREF 6QZL E 202 325 UNP Q96CX2 KCD12_HUMAN 202 325 SEQADV 6QZL SER A 200 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL MET A 201 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL SER B 200 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL MET B 201 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL SER C 200 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL MET C 201 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL SER D 200 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL MET D 201 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL SER E 200 UNP Q96CX2 EXPRESSION TAG SEQADV 6QZL MET E 201 UNP Q96CX2 EXPRESSION TAG SEQRES 1 A 126 SER MET ASP GLY SER ARG ARG SER GLY TYR ILE THR ILE SEQRES 2 A 126 GLY TYR ARG GLY SER TYR THR ILE GLY ARG ASP ALA GLN SEQRES 3 A 126 ALA ASP ALA LYS PHE ARG ARG VAL ALA ARG ILE THR VAL SEQRES 4 A 126 CYS GLY LYS THR SER LEU ALA LYS GLU VAL PHE GLY ASP SEQRES 5 A 126 THR LEU ASN GLU SER ARG ASP PRO ASP ARG PRO PRO GLU SEQRES 6 A 126 ARG TYR THR SER ARG TYR TYR LEU LYS PHE ASN PHE LEU SEQRES 7 A 126 GLU GLN ALA PHE ASP LYS LEU SER GLU SER GLY PHE HIS SEQRES 8 A 126 MET VAL ALA CYS SER SER THR GLY THR CYS ALA PHE ALA SEQRES 9 A 126 SER SER THR ASP GLN SER GLU ASP LYS ILE TRP THR SER SEQRES 10 A 126 TYR THR GLU TYR VAL PHE CYS ARG GLU SEQRES 1 B 126 SER MET ASP GLY SER ARG ARG SER GLY TYR ILE THR ILE SEQRES 2 B 126 GLY TYR ARG GLY SER TYR THR ILE GLY ARG ASP ALA GLN SEQRES 3 B 126 ALA ASP ALA LYS PHE ARG ARG VAL ALA ARG ILE THR VAL SEQRES 4 B 126 CYS GLY LYS THR SER LEU ALA LYS GLU VAL PHE GLY ASP SEQRES 5 B 126 THR LEU ASN GLU SER ARG ASP PRO ASP ARG PRO PRO GLU SEQRES 6 B 126 ARG TYR THR SER ARG TYR TYR LEU LYS PHE ASN PHE LEU SEQRES 7 B 126 GLU GLN ALA PHE ASP LYS LEU SER GLU SER GLY PHE HIS SEQRES 8 B 126 MET VAL ALA CYS SER SER THR GLY THR CYS ALA PHE ALA SEQRES 9 B 126 SER SER THR ASP GLN SER GLU ASP LYS ILE TRP THR SER SEQRES 10 B 126 TYR THR GLU TYR VAL PHE CYS ARG GLU SEQRES 1 C 126 SER MET ASP GLY SER ARG ARG SER GLY TYR ILE THR ILE SEQRES 2 C 126 GLY TYR ARG GLY SER TYR THR ILE GLY ARG ASP ALA GLN SEQRES 3 C 126 ALA ASP ALA LYS PHE ARG ARG VAL ALA ARG ILE THR VAL SEQRES 4 C 126 CYS GLY LYS THR SER LEU ALA LYS GLU VAL PHE GLY ASP SEQRES 5 C 126 THR LEU ASN GLU SER ARG ASP PRO ASP ARG PRO PRO GLU SEQRES 6 C 126 ARG TYR THR SER ARG TYR TYR LEU LYS PHE ASN PHE LEU SEQRES 7 C 126 GLU GLN ALA PHE ASP LYS LEU SER GLU SER GLY PHE HIS SEQRES 8 C 126 MET VAL ALA CYS SER SER THR GLY THR CYS ALA PHE ALA SEQRES 9 C 126 SER SER THR ASP GLN SER GLU ASP LYS ILE TRP THR SER SEQRES 10 C 126 TYR THR GLU TYR VAL PHE CYS ARG GLU SEQRES 1 D 126 SER MET ASP GLY SER ARG ARG SER GLY TYR ILE THR ILE SEQRES 2 D 126 GLY TYR ARG GLY SER TYR THR ILE GLY ARG ASP ALA GLN SEQRES 3 D 126 ALA ASP ALA LYS PHE ARG ARG VAL ALA ARG ILE THR VAL SEQRES 4 D 126 CYS GLY LYS THR SER LEU ALA LYS GLU VAL PHE GLY ASP SEQRES 5 D 126 THR LEU ASN GLU SER ARG ASP PRO ASP ARG PRO PRO GLU SEQRES 6 D 126 ARG TYR THR SER ARG TYR TYR LEU LYS PHE ASN PHE LEU SEQRES 7 D 126 GLU GLN ALA PHE ASP LYS LEU SER GLU SER GLY PHE HIS SEQRES 8 D 126 MET VAL ALA CYS SER SER THR GLY THR CYS ALA PHE ALA SEQRES 9 D 126 SER SER THR ASP GLN SER GLU ASP LYS ILE TRP THR SER SEQRES 10 D 126 TYR THR GLU TYR VAL PHE CYS ARG GLU SEQRES 1 E 126 SER MET ASP GLY SER ARG ARG SER GLY TYR ILE THR ILE SEQRES 2 E 126 GLY TYR ARG GLY SER TYR THR ILE GLY ARG ASP ALA GLN SEQRES 3 E 126 ALA ASP ALA LYS PHE ARG ARG VAL ALA ARG ILE THR VAL SEQRES 4 E 126 CYS GLY LYS THR SER LEU ALA LYS GLU VAL PHE GLY ASP SEQRES 5 E 126 THR LEU ASN GLU SER ARG ASP PRO ASP ARG PRO PRO GLU SEQRES 6 E 126 ARG TYR THR SER ARG TYR TYR LEU LYS PHE ASN PHE LEU SEQRES 7 E 126 GLU GLN ALA PHE ASP LYS LEU SER GLU SER GLY PHE HIS SEQRES 8 E 126 MET VAL ALA CYS SER SER THR GLY THR CYS ALA PHE ALA SEQRES 9 E 126 SER SER THR ASP GLN SER GLU ASP LYS ILE TRP THR SER SEQRES 10 E 126 TYR THR GLU TYR VAL PHE CYS ARG GLU FORMUL 6 HOH *181(H2 O) HELIX 1 AA1 THR A 242 GLY A 250 1 9 HELIX 2 AA2 PHE A 276 SER A 287 1 12 HELIX 3 AA3 THR B 242 GLY B 250 1 9 HELIX 4 AA4 PHE B 276 SER B 287 1 12 HELIX 5 AA5 THR C 242 GLY C 250 1 9 HELIX 6 AA6 PHE C 276 SER C 287 1 12 HELIX 7 AA7 THR D 242 GLY D 250 1 9 HELIX 8 AA8 PHE D 276 SER D 287 1 12 HELIX 9 AA9 THR E 242 GLY E 250 1 9 HELIX 10 AB1 PHE E 276 SER E 287 1 12 SHEET 1 AA1 6 LEU A 253 ASN A 254 0 SHEET 2 AA1 6 TYR A 266 LEU A 272 -1 O TYR A 271 N ASN A 254 SHEET 3 AA1 6 ILE A 236 LYS A 241 -1 N VAL A 238 O TYR A 270 SHEET 4 AA1 6 GLY A 208 THR A 219 -1 N THR A 211 O CYS A 239 SHEET 5 AA1 6 ILE A 313 ARG A 324 -1 O TRP A 314 N TYR A 218 SHEET 6 AA1 6 HIS A 290 ALA A 301 -1 N VAL A 292 O VAL A 321 SHEET 1 AA2 6 LEU B 253 ASN B 254 0 SHEET 2 AA2 6 TYR B 266 LEU B 272 -1 O TYR B 271 N ASN B 254 SHEET 3 AA2 6 ILE B 236 LYS B 241 -1 N VAL B 238 O TYR B 270 SHEET 4 AA2 6 GLY B 208 SER B 217 -1 N GLY B 213 O THR B 237 SHEET 5 AA2 6 THR B 315 ARG B 324 -1 O TYR B 320 N ILE B 212 SHEET 6 AA2 6 HIS B 290 GLY B 298 -1 N VAL B 292 O VAL B 321 SHEET 1 AA3 6 LEU C 253 ASN C 254 0 SHEET 2 AA3 6 TYR C 266 LEU C 272 -1 O TYR C 271 N ASN C 254 SHEET 3 AA3 6 ILE C 236 LYS C 241 -1 N VAL C 238 O TYR C 270 SHEET 4 AA3 6 GLY C 208 TYR C 218 -1 N THR C 211 O CYS C 239 SHEET 5 AA3 6 TRP C 314 ARG C 324 -1 O TRP C 314 N TYR C 218 SHEET 6 AA3 6 HIS C 290 THR C 299 -1 N SER C 295 O GLU C 319 SHEET 1 AA4 6 LEU D 253 ASN D 254 0 SHEET 2 AA4 6 TYR D 266 LEU D 272 -1 O TYR D 271 N ASN D 254 SHEET 3 AA4 6 ILE D 236 LYS D 241 -1 N GLY D 240 O THR D 267 SHEET 4 AA4 6 GLY D 208 GLY D 216 -1 N THR D 211 O CYS D 239 SHEET 5 AA4 6 SER D 316 ARG D 324 -1 O SER D 316 N GLY D 216 SHEET 6 AA4 6 HIS D 290 THR D 297 -1 N THR D 297 O TYR D 317 SHEET 1 AA5 6 LEU E 253 ASN E 254 0 SHEET 2 AA5 6 TYR E 266 LEU E 272 -1 O TYR E 271 N ASN E 254 SHEET 3 AA5 6 ILE E 236 LYS E 241 -1 N VAL E 238 O TYR E 270 SHEET 4 AA5 6 GLY E 208 GLY E 216 -1 N THR E 211 O CYS E 239 SHEET 5 AA5 6 SER E 316 ARG E 324 -1 O TYR E 320 N ILE E 212 SHEET 6 AA5 6 HIS E 290 GLY E 298 -1 N SER E 295 O GLU E 319 CRYST1 88.320 91.360 152.260 90.00 90.00 90.00 C 2 2 21 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011322 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010946 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006568 0.00000