HEADER TRANSFERASE 12-MAR-19 6R05 TITLE T. CRUZI FPPS IN COMPLEX WITH N-BENZYL-6-METHYLPYRIDIN-2-AMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FARNESYL DIPHOSPHATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: TERMINI NOT RESOLVED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 5693; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS FARNESYL DIPHOSPHATE SYNTHASE, STEROL BIOSYNTHESIS, FARNESYL KEYWDS 2 PYROPHOSPHATE, HOMODIMER, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.K.PETRICK,L.MUENZKER,C.SCHLEBERGER,W.JAHNKE REVDAT 3 07-FEB-24 6R05 1 REMARK REVDAT 2 01-MAR-23 6R05 1 JRNL LINK REVDAT 1 01-APR-20 6R05 0 JRNL AUTH J.K.PETRICK,W.JAHNKE JRNL TITL TARGETING FARNESYL PYROPHOSPHATE SYNTHASE OF TRYPANOSOMA JRNL TITL 2 CRUZI BY FRAGMENT-BASED LEAD DISCOVERY JRNL REF THESIS 2019 JRNL DOI 10.17192/Z2019.0501 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2841 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.58 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1152 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2068 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1107 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE : 0.2005 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.91 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 45 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2843 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29900 REMARK 3 B22 (A**2) : 0.29900 REMARK 3 B33 (A**2) : -0.59810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.081 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.080 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.076 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.076 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2945 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3990 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1011 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 496 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2945 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 376 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3794 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.89 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.83 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.26 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -8.2944 -17.7865 -20.3451 REMARK 3 T TENSOR REMARK 3 T11: -0.0390 T22: 0.0372 REMARK 3 T33: -0.0857 T12: 0.0570 REMARK 3 T13: 0.0163 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.7631 L22: 0.2969 REMARK 3 L33: 0.4978 L12: 0.0518 REMARK 3 L13: -0.0292 L23: -0.0577 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: -0.1430 S13: 0.1032 REMARK 3 S21: 0.0388 S22: -0.0134 S23: -0.0159 REMARK 3 S31: -0.0580 S32: 0.0150 S33: -0.0080 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6R05 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999810 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20180126 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57627 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.568 REMARK 200 RESOLUTION RANGE LOW (A) : 66.115 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.00 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.30 REMARK 200 R MERGE FOR SHELL (I) : 3.10200 REMARK 200 R SYM FOR SHELL (I) : 3.10200 REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 4DWG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80 MM MES, 8.5 MM ZNSO4, 19.42% PEG REMARK 280 MME 550, 15% GLYCEROL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.22933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 264.45867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 198.34400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 330.57333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.11467 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 132.22933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 264.45867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 330.57333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 198.34400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 66.11467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -217.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -29.05300 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -50.32127 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -66.11467 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 LYS A 359 REMARK 465 ARG A 360 REMARK 465 LYS A 361 REMARK 465 LYS A 362 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 119 -76.14 -109.76 REMARK 500 THR A 120 162.91 74.03 REMARK 500 ASP A 181 119.48 -165.81 REMARK 500 LYS A 284 -11.46 -141.74 REMARK 500 ASP A 301 116.96 -39.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 506 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 ASP A 102 OD2 97.8 REMARK 620 3 HOH A 610 O 103.8 93.5 REMARK 620 4 HOH A 612 O 87.0 171.2 92.5 REMARK 620 5 HOH A 649 O 123.3 87.6 132.3 83.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 507 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 250 OD2 REMARK 620 2 HOH A 607 O 82.4 REMARK 620 3 HOH A 626 O 87.0 91.2 REMARK 620 4 HOH A 634 O 86.4 92.1 172.2 REMARK 620 5 HOH A 768 O 173.2 96.3 99.7 87.0 REMARK 620 6 HOH A 777 O 93.6 175.2 91.2 85.0 87.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JNE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 507 DBREF 6R05 A 1 362 UNP Q8WS26 Q8WS26_TRYCR 64 425 SEQADV 6R05 GLY A -1 UNP Q8WS26 EXPRESSION TAG SEQADV 6R05 PRO A 0 UNP Q8WS26 EXPRESSION TAG SEQRES 1 A 364 GLY PRO MET ALA SER MET GLU ARG PHE LEU SER VAL TYR SEQRES 2 A 364 ASP GLU VAL GLN ALA PHE LEU LEU ASP GLN LEU GLN SER SEQRES 3 A 364 LYS TYR GLU ILE ASP PRO ASN ARG ALA ARG TYR LEU ARG SEQRES 4 A 364 ILE MET MET ASP THR THR CYS LEU GLY GLY LYS TYR PHE SEQRES 5 A 364 ARG GLY MET THR VAL VAL ASN VAL ALA GLU GLY PHE LEU SEQRES 6 A 364 ALA VAL THR GLN HIS ASP GLU ALA THR LYS GLU ARG ILE SEQRES 7 A 364 LEU HIS ASP ALA CYS VAL GLY GLY TRP MET ILE GLU PHE SEQRES 8 A 364 LEU GLN ALA HIS TYR LEU VAL GLU ASP ASP ILE MET ASP SEQRES 9 A 364 GLY SER VAL MET ARG ARG GLY LYS PRO CYS TRP TYR ARG SEQRES 10 A 364 PHE PRO GLY VAL THR THR GLN CYS ALA ILE ASN ASP GLY SEQRES 11 A 364 ILE ILE LEU LYS SER TRP THR GLN ILE MET ALA TRP HIS SEQRES 12 A 364 TYR PHE ALA ASP ARG PRO PHE LEU LYS ASP LEU LEU CYS SEQRES 13 A 364 LEU PHE GLN LYS VAL ASP TYR ALA THR ALA VAL GLY GLN SEQRES 14 A 364 MET TYR ASP VAL THR SER MET CYS ASP SER ASN LYS LEU SEQRES 15 A 364 ASP PRO GLU VAL ALA GLN PRO MET THR THR ASP PHE ALA SEQRES 16 A 364 GLU PHE THR PRO ALA ILE TYR LYS ARG ILE VAL LYS TYR SEQRES 17 A 364 LYS THR THR PHE TYR THR TYR LEU LEU PRO LEU VAL MET SEQRES 18 A 364 GLY LEU LEU VAL SER GLU ALA ALA ALA SER VAL GLU MET SEQRES 19 A 364 ASN LEU VAL GLU ARG VAL ALA HIS LEU ILE GLY GLU TYR SEQRES 20 A 364 PHE GLN VAL GLN ASP ASP VAL MET ASP CYS PHE THR PRO SEQRES 21 A 364 PRO GLU GLN LEU GLY LYS VAL GLY THR ASP ILE GLU ASP SEQRES 22 A 364 ALA LYS CYS SER TRP LEU ALA VAL THR PHE LEU GLY LYS SEQRES 23 A 364 ALA ASN ALA ALA GLN VAL ALA GLU PHE LYS ALA ASN TYR SEQRES 24 A 364 GLY GLU LYS ASP PRO ALA LYS VAL ALA VAL VAL LYS ARG SEQRES 25 A 364 LEU TYR SER LYS ALA ASN LEU GLN ALA ASP PHE ALA ALA SEQRES 26 A 364 TYR GLU ALA GLU VAL VAL ARG GLU VAL GLU SER LEU ILE SEQRES 27 A 364 GLU GLN LEU LYS VAL LYS SER PRO THR PHE ALA GLU SER SEQRES 28 A 364 VAL ALA VAL VAL TRP GLU LYS THR HIS LYS ARG LYS LYS HET JNE A 501 15 HET SO4 A 502 5 HET DMS A 503 4 HET ACT A 504 4 HET ACT A 505 4 HET ZN A 506 1 HET ZN A 507 1 HETNAM JNE 6-METHYL-~{N}-(PHENYLMETHYL)PYRIDIN-2-AMINE HETNAM SO4 SULFATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM ACT ACETATE ION HETNAM ZN ZINC ION FORMUL 2 JNE C13 H14 N2 FORMUL 3 SO4 O4 S 2- FORMUL 4 DMS C2 H6 O S FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 ZN 2(ZN 2+) FORMUL 9 HOH *262(H2 O) HELIX 1 AA1 ALA A 2 TYR A 26 1 25 HELIX 2 AA2 ASP A 29 LEU A 45 1 17 HELIX 3 AA3 TYR A 49 THR A 66 1 18 HELIX 4 AA4 ASP A 69 GLY A 103 1 35 HELIX 5 AA5 TRP A 113 PHE A 116 5 4 HELIX 6 AA6 VAL A 119 PHE A 143 1 25 HELIX 7 AA7 PHE A 148 THR A 172 1 25 HELIX 8 AA8 ASP A 176 LEU A 180 5 5 HELIX 9 AA9 THR A 196 THR A 208 1 13 HELIX 10 AB1 THR A 208 TYR A 213 1 6 HELIX 11 AB2 TYR A 213 SER A 224 1 12 HELIX 12 AB3 ALA A 226 VAL A 230 5 5 HELIX 13 AB4 GLU A 231 THR A 257 1 27 HELIX 14 AB5 PRO A 258 GLY A 263 1 6 HELIX 15 AB6 SER A 275 GLY A 283 1 9 HELIX 16 AB7 ASN A 286 TYR A 297 1 12 HELIX 17 AB8 ASP A 301 ALA A 315 1 15 HELIX 18 AB9 ASN A 316 LYS A 340 1 25 HELIX 19 AC1 SER A 343 HIS A 358 1 16 SHEET 1 AA1 2 MET A 106 ARG A 107 0 SHEET 2 AA1 2 LYS A 110 PRO A 111 -1 O LYS A 110 N ARG A 107 LINK OD1 ASP A 98 ZN ZN A 506 1555 1555 2.08 LINK OD2 ASP A 102 ZN ZN A 506 1555 1555 2.03 LINK OD2 ASP A 250 ZN ZN A 507 1555 1555 2.03 LINK ZN ZN A 506 O HOH A 610 1555 1555 1.83 LINK ZN ZN A 506 O HOH A 612 1555 1555 2.19 LINK ZN ZN A 506 O HOH A 649 1555 1555 1.89 LINK ZN ZN A 507 O HOH A 607 1555 1555 2.08 LINK ZN ZN A 507 O HOH A 626 1555 1555 1.88 LINK ZN ZN A 507 O HOH A 634 1555 1555 1.91 LINK ZN ZN A 507 O HOH A 768 1555 1555 2.10 LINK ZN ZN A 507 O HOH A 777 1555 1555 2.14 SITE 1 AC1 4 PRO A 111 ARG A 115 PHE A 116 GLU A 183 SITE 1 AC2 11 GLY A 47 LYS A 48 TYR A 49 PHE A 50 SITE 2 AC2 11 ARG A 51 GLN A 91 ARG A 108 HOH A 637 SITE 3 AC2 11 HOH A 664 HOH A 684 HOH A 695 SITE 1 AC3 3 ASP A 98 GLN A 167 LYS A 207 SITE 1 AC4 2 TYR A 11 ASP A 12 SITE 1 AC5 4 PHE A 50 TYR A 213 PHE A 246 LYS A 356 SITE 1 AC6 5 ASP A 98 ASP A 102 HOH A 610 HOH A 612 SITE 2 AC6 5 HOH A 649 SITE 1 AC7 6 ASP A 250 HOH A 607 HOH A 626 HOH A 634 SITE 2 AC7 6 HOH A 768 HOH A 777 CRYST1 58.106 58.106 396.688 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017210 0.009936 0.000000 0.00000 SCALE2 0.000000 0.019872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002521 0.00000