data_6R28 # _entry.id 6R28 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6R28 pdb_00006r28 10.2210/pdb6r28/pdb WWPDB D_1292101294 ? ? BMRB 34380 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-01-29 2 'Structure model' 1 1 2020-02-05 3 'Structure model' 1 2 2020-03-11 4 'Structure model' 1 3 2023-06-14 5 'Structure model' 1 4 2023-09-27 6 'Structure model' 2 0 2023-11-15 7 'Structure model' 2 1 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' Other 5 5 'Structure model' 'Data collection' 6 6 'Structure model' 'Atomic model' 7 6 'Structure model' 'Data collection' 8 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_database_status 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 6 'Structure model' atom_site 10 6 'Structure model' chem_comp_atom 11 6 'Structure model' chem_comp_bond 12 7 'Structure model' chem_comp # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation.title' 10 3 'Structure model' '_citation_author.identifier_ORCID' 11 4 'Structure model' '_database_2.pdbx_DOI' 12 4 'Structure model' '_database_2.pdbx_database_accession' 13 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 14 6 'Structure model' '_atom_site.auth_atom_id' 15 6 'Structure model' '_atom_site.label_atom_id' 16 6 'Structure model' '_chem_comp_atom.atom_id' 17 6 'Structure model' '_chem_comp_bond.atom_id_2' 18 7 'Structure model' '_chem_comp.pdbx_synonyms' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6R28 _pdbx_database_status.recvd_initial_deposition_date 2019-03-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Structure of peptide P7, which binds Cdc42 and inhibits effector interactions.' _pdbx_database_related.db_id 34380 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Murphy, N.P.' 1 ? 'Mott, H.R.' 2 ? 'Owen, D.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 295 _citation.language ? _citation.page_first 2866 _citation.page_last 2884 _citation.title 'The discovery and maturation of peptide biologics targeting the small G-protein Cdc42: A bioblockade for Ras-driven signaling.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.010077 _citation.pdbx_database_id_PubMed 31959628 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tetley, G.J.N.' 1 ? primary 'Murphy, N.P.' 2 ? primary 'Bonetto, S.' 3 ? primary 'Ivanova-Berndt, G.' 4 ? primary 'Revell, J.' 5 ? primary 'Mott, H.R.' 6 ? primary 'Cooley, R.N.' 7 ? primary 'Owen, D.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'peptide P7' _entity.formula_weight 2070.401 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PSI(HCS)HVHRPDWPCWYR' _entity_poly.pdbx_seq_one_letter_code_can PSIXHVHRPDWPCWYR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 SER n 1 3 ILE n 1 4 HCS n 1 5 HIS n 1 6 VAL n 1 7 HIS n 1 8 ARG n 1 9 PRO n 1 10 ASP n 1 11 TRP n 1 12 PRO n 1 13 CYS n 1 14 TRP n 1 15 TYR n 1 16 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 HCS 'L-peptide linking' . '2-AMINO-4-MERCAPTO-BUTYRIC ACID' L-Homocysteine 'C4 H9 N O2 S' 135.185 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 HCS 4 4 4 HCS HCS A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 TRP 14 14 14 TRP TRP A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 ARG 16 16 16 ARG ARG A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6R28 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6R28 _struct.title 'Structure of peptide P7, which binds Cdc42 and inhibits effector interactions.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6R28 _struct_keywords.text 'Inhibitor, cyclic peptide, synthetic peptide., DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6R28 _struct_ref.pdbx_db_accession 6R28 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6R28 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 16 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6R28 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 16 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 1700 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A HCS 4 SD ? ? ? 1_555 A CYS 13 SG ? ? A HCS 4 A CYS 13 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale1 covale both ? A ILE 3 C ? ? ? 1_555 A HCS 4 N ? ? A ILE 3 A HCS 4 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A HCS 4 C ? ? ? 1_555 A HIS 5 N ? ? A HCS 4 A HIS 5 1_555 ? ? ? ? ? ? ? 1.325 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 5 ? ? 175.24 69.01 2 1 PRO A 12 ? ? -78.28 -166.93 3 1 TRP A 14 ? ? -133.64 -51.99 4 1 TYR A 15 ? ? 38.28 89.91 5 2 HIS A 5 ? ? 171.87 46.13 6 2 PRO A 12 ? ? -77.20 -169.09 7 2 TRP A 14 ? ? -137.52 -49.58 8 2 TYR A 15 ? ? 36.81 84.33 9 3 HIS A 5 ? ? -173.79 -69.51 10 3 VAL A 6 ? ? 47.58 -156.05 11 3 PRO A 12 ? ? -77.05 -167.11 12 3 TRP A 14 ? ? -140.63 -50.40 13 3 TYR A 15 ? ? 38.91 86.33 14 4 SER A 2 ? ? 59.62 84.20 15 4 HIS A 5 ? ? 179.18 65.22 16 4 TRP A 14 ? ? -137.23 -53.11 17 4 TYR A 15 ? ? 37.00 83.12 18 5 SER A 2 ? ? 61.91 83.42 19 5 HIS A 5 ? ? 179.69 39.17 20 5 TRP A 14 ? ? -138.46 -51.01 21 5 TYR A 15 ? ? 36.75 85.76 22 6 HIS A 5 ? ? -171.71 -74.83 23 6 VAL A 6 ? ? 47.76 -156.89 24 6 HIS A 7 ? ? -105.23 -67.73 25 6 TRP A 14 ? ? -136.35 -50.40 26 6 TYR A 15 ? ? 36.68 87.64 27 7 HIS A 5 ? ? 172.90 75.28 28 7 PRO A 12 ? ? -78.02 -169.01 29 7 TRP A 14 ? ? -137.65 -50.69 30 7 TYR A 15 ? ? 38.73 89.26 31 8 HIS A 5 ? ? -173.47 -68.61 32 8 VAL A 6 ? ? 47.22 -154.40 33 8 HIS A 7 ? ? -101.04 -61.32 34 8 PRO A 12 ? ? -78.72 -165.54 35 8 TRP A 14 ? ? -138.99 -49.88 36 8 TYR A 15 ? ? 37.59 86.24 37 9 HIS A 5 ? ? -179.85 48.20 38 9 TRP A 14 ? ? -134.05 -51.73 39 9 TYR A 15 ? ? 37.04 85.21 40 10 ILE A 3 ? ? 57.06 85.18 41 10 HIS A 5 ? ? -178.18 37.80 42 10 PRO A 12 ? ? -79.88 -165.47 43 10 TRP A 14 ? ? -138.73 -48.29 44 10 TYR A 15 ? ? 36.65 87.79 45 11 HIS A 5 ? ? -177.84 -60.69 46 11 VAL A 6 ? ? 40.81 -148.64 47 11 PRO A 12 ? ? -75.27 -166.69 48 11 TRP A 14 ? ? -141.29 -51.67 49 11 TYR A 15 ? ? 37.44 85.55 50 12 HIS A 5 ? ? 172.80 -65.51 51 12 VAL A 6 ? ? 43.01 -159.69 52 12 HIS A 7 ? ? -96.50 -65.55 53 12 PRO A 12 ? ? -78.12 -166.33 54 12 TRP A 14 ? ? -139.54 -51.15 55 12 TYR A 15 ? ? 39.28 85.17 56 13 HIS A 5 ? ? -178.13 43.20 57 13 TRP A 14 ? ? -135.40 -55.69 58 13 TYR A 15 ? ? 49.98 -70.16 59 14 ILE A 3 ? ? 57.65 81.73 60 14 HIS A 5 ? ? 179.31 45.26 61 14 PRO A 12 ? ? -79.64 -168.15 62 14 TRP A 14 ? ? -138.63 -52.94 63 14 TYR A 15 ? ? 35.99 83.62 64 15 HIS A 5 ? ? 174.75 75.38 65 15 TRP A 14 ? ? -136.95 -50.39 66 15 TYR A 15 ? ? 36.90 87.08 67 16 HIS A 5 ? ? -177.44 43.13 68 16 TRP A 14 ? ? -138.84 -52.90 69 16 TYR A 15 ? ? 48.22 -70.87 70 17 HIS A 5 ? ? 179.38 38.18 71 17 PRO A 12 ? ? -79.98 -167.85 72 17 TRP A 14 ? ? -140.07 -50.91 73 17 TYR A 15 ? ? 38.45 87.69 74 18 HIS A 5 ? ? 178.22 90.41 75 18 PRO A 12 ? ? -78.63 -168.94 76 18 TRP A 14 ? ? -132.19 -48.84 77 18 TYR A 15 ? ? 38.19 86.96 78 19 HIS A 5 ? ? 175.17 -59.33 79 19 VAL A 6 ? ? 39.91 -145.14 80 19 TRP A 14 ? ? -138.29 -48.19 81 19 TYR A 15 ? ? 37.31 88.35 82 20 HIS A 5 ? ? 179.56 90.69 83 20 TRP A 14 ? ? -138.81 -50.57 84 20 TYR A 15 ? ? 37.40 82.29 85 21 SER A 2 ? ? 50.96 74.61 86 21 HIS A 5 ? ? 179.56 -68.79 87 21 VAL A 6 ? ? 48.42 -161.42 88 21 HIS A 7 ? ? -95.80 -65.88 89 21 PRO A 12 ? ? -78.50 -165.59 90 21 TRP A 14 ? ? -136.44 -50.19 91 21 TYR A 15 ? ? 35.21 88.23 92 22 HIS A 5 ? ? 176.46 68.43 93 22 PRO A 12 ? ? -79.96 -167.79 94 22 TRP A 14 ? ? -137.58 -51.99 95 22 TYR A 15 ? ? 36.26 91.82 96 23 HIS A 5 ? ? 179.28 43.72 97 23 TRP A 14 ? ? -136.77 -49.11 98 23 TYR A 15 ? ? 37.41 89.08 99 24 HIS A 5 ? ? -179.29 75.66 100 24 PRO A 12 ? ? -79.87 -167.02 101 24 TRP A 14 ? ? -136.48 -52.14 102 24 TYR A 15 ? ? 35.92 79.50 103 25 HIS A 5 ? ? -178.90 49.45 104 25 PRO A 12 ? ? -78.36 -168.99 105 25 TRP A 14 ? ? -135.31 -52.54 106 25 TYR A 15 ? ? 44.94 -77.79 107 26 HIS A 5 ? ? 179.71 40.48 108 26 TRP A 14 ? ? -141.24 -50.12 109 26 TYR A 15 ? ? 37.95 86.95 110 27 HIS A 5 ? ? -179.77 41.43 111 27 PRO A 12 ? ? -79.81 -163.25 112 27 TRP A 14 ? ? -139.16 -49.05 113 27 TYR A 15 ? ? 38.22 87.97 114 28 HIS A 5 ? ? -178.52 38.04 115 28 TRP A 14 ? ? -139.08 -50.29 116 28 TYR A 15 ? ? 37.44 87.03 117 29 HIS A 5 ? ? 177.86 -65.52 118 29 VAL A 6 ? ? 46.26 -158.54 119 29 PRO A 12 ? ? -77.38 -167.98 120 29 TRP A 14 ? ? -141.17 -49.33 121 29 TYR A 15 ? ? 36.69 85.11 122 30 SER A 2 ? ? -158.47 -55.48 123 30 ILE A 3 ? ? 63.24 79.63 124 30 HIS A 5 ? ? 173.79 48.56 125 30 PRO A 12 ? ? -79.15 -166.36 126 30 TRP A 14 ? ? -139.40 -51.15 127 30 TYR A 15 ? ? 36.48 81.18 128 31 HIS A 5 ? ? 174.78 41.78 129 31 TRP A 14 ? ? -137.20 -50.39 130 31 TYR A 15 ? ? 35.98 81.73 131 32 ILE A 3 ? ? 61.60 86.79 132 32 HIS A 5 ? ? -179.47 41.78 133 32 PRO A 12 ? ? -79.72 -167.13 134 32 TRP A 14 ? ? -140.55 -50.91 135 32 TYR A 15 ? ? 35.55 89.94 136 33 ILE A 3 ? ? 56.83 81.20 137 33 HIS A 5 ? ? 171.40 75.82 138 33 PRO A 12 ? ? -76.82 -167.17 139 33 TRP A 14 ? ? -136.24 -50.82 140 33 TYR A 15 ? ? 36.41 81.27 141 34 HIS A 5 ? ? 174.68 99.54 142 34 PRO A 12 ? ? -78.23 -167.64 143 34 TRP A 14 ? ? -132.49 -48.57 144 34 TYR A 15 ? ? 38.54 91.39 145 35 HIS A 5 ? ? 175.86 47.20 146 35 TRP A 14 ? ? -137.42 -50.53 147 35 TYR A 15 ? ? 38.05 85.92 # _pdbx_entry_details.entry_id 6R28 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_ensemble.entry_id 6R28 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 35 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6R28 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mg/mL peptide, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 'unlabelled sample' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '50mM sodium phosphate pH 7.0' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component peptide _pdbx_nmr_exptl_sample.concentration 5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mg/mL _pdbx_nmr_exptl_sample.isotopic_labeling none # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 TOCSY 1 isotropic 2 1 1 COSY 1 isotropic 3 1 1 NOESY 1 isotropic # _pdbx_nmr_refine.entry_id 6R28 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'CcpNmr Analysis' 2 CCPN 2 'structure calculation' ARIA 1.2 ;Linge, O'Donoghue and Nilges ; 3 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 4 refinement CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASP N N N N 28 ASP CA C N S 29 ASP C C N N 30 ASP O O N N 31 ASP CB C N N 32 ASP CG C N N 33 ASP OD1 O N N 34 ASP OD2 O N N 35 ASP OXT O N N 36 ASP H H N N 37 ASP H2 H N N 38 ASP HA H N N 39 ASP HB2 H N N 40 ASP HB3 H N N 41 ASP HD2 H N N 42 ASP HXT H N N 43 CYS N N N N 44 CYS CA C N R 45 CYS C C N N 46 CYS O O N N 47 CYS CB C N N 48 CYS SG S N N 49 CYS OXT O N N 50 CYS H H N N 51 CYS H2 H N N 52 CYS HA H N N 53 CYS HB2 H N N 54 CYS HB3 H N N 55 CYS HG H N N 56 CYS HXT H N N 57 HCS N N N N 58 HCS CA C N S 59 HCS CB C N N 60 HCS CG C N N 61 HCS SD S N N 62 HCS C C N N 63 HCS OXT O N N 64 HCS O O N N 65 HCS H H N N 66 HCS H2 H N N 67 HCS HA H N N 68 HCS HB2 H N N 69 HCS HB3 H N N 70 HCS HG2 H N N 71 HCS HG3 H N N 72 HCS HD H N N 73 HCS HXT H N N 74 HIS N N N N 75 HIS CA C N S 76 HIS C C N N 77 HIS O O N N 78 HIS CB C N N 79 HIS CG C Y N 80 HIS ND1 N Y N 81 HIS CD2 C Y N 82 HIS CE1 C Y N 83 HIS NE2 N Y N 84 HIS OXT O N N 85 HIS H H N N 86 HIS H2 H N N 87 HIS HA H N N 88 HIS HB2 H N N 89 HIS HB3 H N N 90 HIS HD1 H N N 91 HIS HD2 H N N 92 HIS HE1 H N N 93 HIS HE2 H N N 94 HIS HXT H N N 95 ILE N N N N 96 ILE CA C N S 97 ILE C C N N 98 ILE O O N N 99 ILE CB C N S 100 ILE CG1 C N N 101 ILE CG2 C N N 102 ILE CD1 C N N 103 ILE OXT O N N 104 ILE H H N N 105 ILE H2 H N N 106 ILE HA H N N 107 ILE HB H N N 108 ILE HG12 H N N 109 ILE HG13 H N N 110 ILE HG21 H N N 111 ILE HG22 H N N 112 ILE HG23 H N N 113 ILE HD11 H N N 114 ILE HD12 H N N 115 ILE HD13 H N N 116 ILE HXT H N N 117 PRO N N N N 118 PRO CA C N S 119 PRO C C N N 120 PRO O O N N 121 PRO CB C N N 122 PRO CG C N N 123 PRO CD C N N 124 PRO OXT O N N 125 PRO H H N N 126 PRO HA H N N 127 PRO HB2 H N N 128 PRO HB3 H N N 129 PRO HG2 H N N 130 PRO HG3 H N N 131 PRO HD2 H N N 132 PRO HD3 H N N 133 PRO HXT H N N 134 SER N N N N 135 SER CA C N S 136 SER C C N N 137 SER O O N N 138 SER CB C N N 139 SER OG O N N 140 SER OXT O N N 141 SER H H N N 142 SER H2 H N N 143 SER HA H N N 144 SER HB2 H N N 145 SER HB3 H N N 146 SER HG H N N 147 SER HXT H N N 148 TRP N N N N 149 TRP CA C N S 150 TRP C C N N 151 TRP O O N N 152 TRP CB C N N 153 TRP CG C Y N 154 TRP CD1 C Y N 155 TRP CD2 C Y N 156 TRP NE1 N Y N 157 TRP CE2 C Y N 158 TRP CE3 C Y N 159 TRP CZ2 C Y N 160 TRP CZ3 C Y N 161 TRP CH2 C Y N 162 TRP OXT O N N 163 TRP H H N N 164 TRP H2 H N N 165 TRP HA H N N 166 TRP HB2 H N N 167 TRP HB3 H N N 168 TRP HD1 H N N 169 TRP HE1 H N N 170 TRP HE3 H N N 171 TRP HZ2 H N N 172 TRP HZ3 H N N 173 TRP HH2 H N N 174 TRP HXT H N N 175 TYR N N N N 176 TYR CA C N S 177 TYR C C N N 178 TYR O O N N 179 TYR CB C N N 180 TYR CG C Y N 181 TYR CD1 C Y N 182 TYR CD2 C Y N 183 TYR CE1 C Y N 184 TYR CE2 C Y N 185 TYR CZ C Y N 186 TYR OH O N N 187 TYR OXT O N N 188 TYR H H N N 189 TYR H2 H N N 190 TYR HA H N N 191 TYR HB2 H N N 192 TYR HB3 H N N 193 TYR HD1 H N N 194 TYR HD2 H N N 195 TYR HE1 H N N 196 TYR HE2 H N N 197 TYR HH H N N 198 TYR HXT H N N 199 VAL N N N N 200 VAL CA C N S 201 VAL C C N N 202 VAL O O N N 203 VAL CB C N N 204 VAL CG1 C N N 205 VAL CG2 C N N 206 VAL OXT O N N 207 VAL H H N N 208 VAL H2 H N N 209 VAL HA H N N 210 VAL HB H N N 211 VAL HG11 H N N 212 VAL HG12 H N N 213 VAL HG13 H N N 214 VAL HG21 H N N 215 VAL HG22 H N N 216 VAL HG23 H N N 217 VAL HXT H N N 218 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASP N CA sing N N 27 ASP N H sing N N 28 ASP N H2 sing N N 29 ASP CA C sing N N 30 ASP CA CB sing N N 31 ASP CA HA sing N N 32 ASP C O doub N N 33 ASP C OXT sing N N 34 ASP CB CG sing N N 35 ASP CB HB2 sing N N 36 ASP CB HB3 sing N N 37 ASP CG OD1 doub N N 38 ASP CG OD2 sing N N 39 ASP OD2 HD2 sing N N 40 ASP OXT HXT sing N N 41 CYS N CA sing N N 42 CYS N H sing N N 43 CYS N H2 sing N N 44 CYS CA C sing N N 45 CYS CA CB sing N N 46 CYS CA HA sing N N 47 CYS C O doub N N 48 CYS C OXT sing N N 49 CYS CB SG sing N N 50 CYS CB HB2 sing N N 51 CYS CB HB3 sing N N 52 CYS SG HG sing N N 53 CYS OXT HXT sing N N 54 HCS N CA sing N N 55 HCS N H sing N N 56 HCS N H2 sing N N 57 HCS CA CB sing N N 58 HCS CA C sing N N 59 HCS CA HA sing N N 60 HCS CB CG sing N N 61 HCS CB HB2 sing N N 62 HCS CB HB3 sing N N 63 HCS CG SD sing N N 64 HCS CG HG2 sing N N 65 HCS CG HG3 sing N N 66 HCS SD HD sing N N 67 HCS C OXT sing N N 68 HCS C O doub N N 69 HCS OXT HXT sing N N 70 HIS N CA sing N N 71 HIS N H sing N N 72 HIS N H2 sing N N 73 HIS CA C sing N N 74 HIS CA CB sing N N 75 HIS CA HA sing N N 76 HIS C O doub N N 77 HIS C OXT sing N N 78 HIS CB CG sing N N 79 HIS CB HB2 sing N N 80 HIS CB HB3 sing N N 81 HIS CG ND1 sing Y N 82 HIS CG CD2 doub Y N 83 HIS ND1 CE1 doub Y N 84 HIS ND1 HD1 sing N N 85 HIS CD2 NE2 sing Y N 86 HIS CD2 HD2 sing N N 87 HIS CE1 NE2 sing Y N 88 HIS CE1 HE1 sing N N 89 HIS NE2 HE2 sing N N 90 HIS OXT HXT sing N N 91 ILE N CA sing N N 92 ILE N H sing N N 93 ILE N H2 sing N N 94 ILE CA C sing N N 95 ILE CA CB sing N N 96 ILE CA HA sing N N 97 ILE C O doub N N 98 ILE C OXT sing N N 99 ILE CB CG1 sing N N 100 ILE CB CG2 sing N N 101 ILE CB HB sing N N 102 ILE CG1 CD1 sing N N 103 ILE CG1 HG12 sing N N 104 ILE CG1 HG13 sing N N 105 ILE CG2 HG21 sing N N 106 ILE CG2 HG22 sing N N 107 ILE CG2 HG23 sing N N 108 ILE CD1 HD11 sing N N 109 ILE CD1 HD12 sing N N 110 ILE CD1 HD13 sing N N 111 ILE OXT HXT sing N N 112 PRO N CA sing N N 113 PRO N CD sing N N 114 PRO N H sing N N 115 PRO CA C sing N N 116 PRO CA CB sing N N 117 PRO CA HA sing N N 118 PRO C O doub N N 119 PRO C OXT sing N N 120 PRO CB CG sing N N 121 PRO CB HB2 sing N N 122 PRO CB HB3 sing N N 123 PRO CG CD sing N N 124 PRO CG HG2 sing N N 125 PRO CG HG3 sing N N 126 PRO CD HD2 sing N N 127 PRO CD HD3 sing N N 128 PRO OXT HXT sing N N 129 SER N CA sing N N 130 SER N H sing N N 131 SER N H2 sing N N 132 SER CA C sing N N 133 SER CA CB sing N N 134 SER CA HA sing N N 135 SER C O doub N N 136 SER C OXT sing N N 137 SER CB OG sing N N 138 SER CB HB2 sing N N 139 SER CB HB3 sing N N 140 SER OG HG sing N N 141 SER OXT HXT sing N N 142 TRP N CA sing N N 143 TRP N H sing N N 144 TRP N H2 sing N N 145 TRP CA C sing N N 146 TRP CA CB sing N N 147 TRP CA HA sing N N 148 TRP C O doub N N 149 TRP C OXT sing N N 150 TRP CB CG sing N N 151 TRP CB HB2 sing N N 152 TRP CB HB3 sing N N 153 TRP CG CD1 doub Y N 154 TRP CG CD2 sing Y N 155 TRP CD1 NE1 sing Y N 156 TRP CD1 HD1 sing N N 157 TRP CD2 CE2 doub Y N 158 TRP CD2 CE3 sing Y N 159 TRP NE1 CE2 sing Y N 160 TRP NE1 HE1 sing N N 161 TRP CE2 CZ2 sing Y N 162 TRP CE3 CZ3 doub Y N 163 TRP CE3 HE3 sing N N 164 TRP CZ2 CH2 doub Y N 165 TRP CZ2 HZ2 sing N N 166 TRP CZ3 CH2 sing Y N 167 TRP CZ3 HZ3 sing N N 168 TRP CH2 HH2 sing N N 169 TRP OXT HXT sing N N 170 TYR N CA sing N N 171 TYR N H sing N N 172 TYR N H2 sing N N 173 TYR CA C sing N N 174 TYR CA CB sing N N 175 TYR CA HA sing N N 176 TYR C O doub N N 177 TYR C OXT sing N N 178 TYR CB CG sing N N 179 TYR CB HB2 sing N N 180 TYR CB HB3 sing N N 181 TYR CG CD1 doub Y N 182 TYR CG CD2 sing Y N 183 TYR CD1 CE1 sing Y N 184 TYR CD1 HD1 sing N N 185 TYR CD2 CE2 doub Y N 186 TYR CD2 HD2 sing N N 187 TYR CE1 CZ doub Y N 188 TYR CE1 HE1 sing N N 189 TYR CE2 CZ sing Y N 190 TYR CE2 HE2 sing N N 191 TYR CZ OH sing N N 192 TYR OH HH sing N N 193 TYR OXT HXT sing N N 194 VAL N CA sing N N 195 VAL N H sing N N 196 VAL N H2 sing N N 197 VAL CA C sing N N 198 VAL CA CB sing N N 199 VAL CA HA sing N N 200 VAL C O doub N N 201 VAL C OXT sing N N 202 VAL CB CG1 sing N N 203 VAL CB CG2 sing N N 204 VAL CB HB sing N N 205 VAL CG1 HG11 sing N N 206 VAL CG1 HG12 sing N N 207 VAL CG1 HG13 sing N N 208 VAL CG2 HG21 sing N N 209 VAL CG2 HG22 sing N N 210 VAL CG2 HG23 sing N N 211 VAL OXT HXT sing N N 212 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (United Kingdom)' 'United Kingdom' MR/K017101/1 1 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' ? 2 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6R28 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_