HEADER HORMONE 19-MAR-19 6R2X TITLE NMR STRUCTURE OF CHROMOGRANIN A (F39-D63) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMOGRANIN-A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CGA,PITUITARY SECRETORY PROTEIN I,SP-I; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHGA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FRAGMENT OF CHROMOGRANIN A, LIGAND OF ALPHA V BETA 6, INTERACTORS, KEYWDS 2 HORMONE EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR F.NARDELLI,G.QUILICI,M.GHITTI,F.CURNIS,A.GORI,A.BERARDI,A.CORTI, AUTHOR 2 G.MUSCO REVDAT 3 14-JUN-23 6R2X 1 REMARK REVDAT 2 18-DEC-19 6R2X 1 JRNL REVDAT 1 04-DEC-19 6R2X 0 JRNL AUTH F.NARDELLI,M.GHITTI,G.QUILICI,A.GORI,Q.LUO,A.BERARDI, JRNL AUTH 2 A.SACCHI,M.MONIERI,G.BERGAMASCHI,W.BERMEL,F.CHEN,A.CORTI, JRNL AUTH 3 F.CURNIS,G.MUSCO JRNL TITL A STAPLED CHROMOGRANIN A-DERIVED PEPTIDE IS A POTENT DUAL JRNL TITL 2 LIGAND FOR INTEGRINS ALPHA V BETA 6 AND ALPHA V BETA 8. JRNL REF CHEM.COMMUN.(CAMB.) V. 55 14777 2019 JRNL REFN ESSN 1364-548X JRNL PMID 31755501 JRNL DOI 10.1039/C9CC08518A REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.3 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6R2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1200012830. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 280 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 148 REMARK 210 PRESSURE : 1 BAR REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] REMARK 210 CHROMOGRANIN A, 100 MM SODIUM REMARK 210 CHLORIDE, 20 MM SODIUM PHOSPHATE, REMARK 210 90% H2O/10% D2O; 0.5 MM REMARK 210 CHROMOGRANIN A, 100 MM SODIUM REMARK 210 CHLORIDE, 20 MM SODIUM PHOSPHATE, REMARK 210 90% H2O/10% D2O; 0.5 MM [U-13C; REMARK 210 U-15N] CHROMOGRANIN A, 100 MM REMARK 210 SODIUM CHLORIDE, 20 MM SODIUM REMARK 210 PHOSPHATE, 100% D2O; 0.5 MM REMARK 210 CHROMOGRANIN A, 100 MM SODIUM REMARK 210 CHLORIDE, 20 MM SODIUM PHOSPHATE, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 3D HNCA; 3D HNCO; 3D HNHA; 3D 1H- REMARK 210 13C NOESY; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE-600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.3, CCPNMR ANALYSIS 2.4 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 GLU A 2 81.90 52.87 REMARK 500 2 LYS A 21 107.70 -57.58 REMARK 500 3 GLU A 2 113.69 67.65 REMARK 500 4 ARG A 5 40.67 -106.41 REMARK 500 5 LEU A 23 90.40 67.48 REMARK 500 5 GLN A 24 159.37 73.03 REMARK 500 7 GLU A 2 117.68 67.82 REMARK 500 7 LEU A 23 68.25 -107.85 REMARK 500 9 GLU A 2 126.44 70.19 REMARK 500 9 GLN A 24 169.60 72.18 REMARK 500 11 GLU A 2 77.76 -108.75 REMARK 500 12 GLU A 22 45.83 -88.08 REMARK 500 13 GLU A 2 82.83 -69.66 REMARK 500 13 LEU A 20 -49.69 -135.81 REMARK 500 15 THR A 3 60.90 -112.58 REMARK 500 15 LEU A 4 89.71 -69.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34381 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF CHROMOGRANIN A (F39-D63) DBREF 6R2X A 1 25 UNP P10645 CMGA_HUMAN 57 81 SEQRES 1 A 25 PHE GLU THR LEU ARG GLY ASP GLU ARG ILE LEU SER ILE SEQRES 2 A 25 LEU ARG HIS GLN ASN LEU LEU LYS GLU LEU GLN ASP HELIX 1 AA1 GLY A 6 LYS A 21 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1