HEADER TRANSFERASE 22-MAR-19 6R4B TITLE AURORA-A IN COMPLEX WITH SHAPE-DIVERSE FRAGMENT 56 CAVEAT 6R4B JSN A 508 HAS WRONG CHIRALITY AT ATOM C3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SER/THR KINASE ALLOSTERIC SITE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.BAYLISS,P.J.MCINTYRE REVDAT 4 24-JAN-24 6R4B 1 LINK REVDAT 3 10-JUL-19 6R4B 1 REMARK REVDAT 2 22-MAY-19 6R4B 1 JRNL REVDAT 1 08-MAY-19 6R4B 0 JRNL AUTH R.ZHANG,P.J.MCINTYRE,P.M.COLLINS,D.J.FOLEY,C.ARTER, JRNL AUTH 2 F.VON DELFT,R.BAYLISS,S.WARRINER,A.NELSON JRNL TITL CONSTRUCTION OF A SHAPE-DIVERSE FRAGMENT SET: DESIGN, JRNL TITL 2 SYNTHESIS AND SCREEN AGAINST AURORA-A KINASE. JRNL REF CHEMISTRY V. 25 6831 2019 JRNL REFN ISSN 0947-6539 JRNL PMID 31026091 JRNL DOI 10.1002/CHEM.201900815 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 19541 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 1008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0645 - 4.1087 1.00 2853 162 0.1588 0.1955 REMARK 3 2 4.1087 - 3.2626 1.00 2681 147 0.1860 0.2223 REMARK 3 3 3.2626 - 2.8506 1.00 2624 157 0.2277 0.2941 REMARK 3 4 2.8506 - 2.5902 1.00 2638 137 0.2275 0.2760 REMARK 3 5 2.5902 - 2.4046 1.00 2580 136 0.2205 0.2559 REMARK 3 6 2.4046 - 2.2629 1.00 2598 145 0.2156 0.2679 REMARK 3 7 2.2629 - 2.1496 1.00 2559 124 0.2140 0.2517 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2247 REMARK 3 ANGLE : 1.154 3057 REMARK 3 CHIRALITY : 0.051 329 REMARK 3 PLANARITY : 0.005 389 REMARK 3 DIHEDRAL : 16.629 865 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3548 21.9684 -11.9305 REMARK 3 T TENSOR REMARK 3 T11: 0.4400 T22: 0.4417 REMARK 3 T33: 0.4742 T12: -0.0099 REMARK 3 T13: -0.0184 T23: -0.1409 REMARK 3 L TENSOR REMARK 3 L11: 2.2421 L22: 1.7430 REMARK 3 L33: 1.0049 L12: 0.9044 REMARK 3 L13: 0.1463 L23: 0.1731 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: 0.0323 S13: -0.2777 REMARK 3 S21: -0.1880 S22: 0.1680 S23: -0.4106 REMARK 3 S31: 0.2464 S32: 0.1171 S33: -0.1025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2686 20.3563 -17.0163 REMARK 3 T TENSOR REMARK 3 T11: 0.5471 T22: 0.5886 REMARK 3 T33: 0.4259 T12: 0.0081 REMARK 3 T13: -0.0497 T23: -0.1958 REMARK 3 L TENSOR REMARK 3 L11: 3.2449 L22: 9.4313 REMARK 3 L33: 5.3587 L12: 1.8086 REMARK 3 L13: -1.1836 L23: -5.1172 REMARK 3 S TENSOR REMARK 3 S11: -0.2756 S12: 0.4775 S13: -0.4778 REMARK 3 S21: -1.0921 S22: 0.3404 S23: 0.3313 REMARK 3 S31: -0.2220 S32: -0.8252 S33: -0.1654 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5160 32.9969 -11.0469 REMARK 3 T TENSOR REMARK 3 T11: 0.3497 T22: 0.4485 REMARK 3 T33: 0.3007 T12: -0.0165 REMARK 3 T13: -0.0157 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 3.0868 L22: 3.0625 REMARK 3 L33: 0.8579 L12: -1.5368 REMARK 3 L13: -0.7044 L23: 0.5899 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: 0.3280 S13: -0.1168 REMARK 3 S21: -0.2289 S22: 0.0444 S23: 0.0397 REMARK 3 S31: 0.0025 S32: -0.1100 S33: -0.1007 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 289 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8038 32.2096 -3.7750 REMARK 3 T TENSOR REMARK 3 T11: 0.3593 T22: 0.4223 REMARK 3 T33: 0.4884 T12: -0.0014 REMARK 3 T13: -0.0386 T23: -0.0606 REMARK 3 L TENSOR REMARK 3 L11: 2.5966 L22: 2.6092 REMARK 3 L33: 3.1512 L12: 0.5405 REMARK 3 L13: 0.8872 L23: 0.5542 REMARK 3 S TENSOR REMARK 3 S11: 0.1533 S12: 0.3261 S13: -0.3573 REMARK 3 S21: -0.0557 S22: -0.0779 S23: 0.3226 REMARK 3 S31: 0.3595 S32: -0.3009 S33: -0.0633 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.2924 30.4329 7.6920 REMARK 3 T TENSOR REMARK 3 T11: 0.5393 T22: 0.4615 REMARK 3 T33: 0.5181 T12: -0.0003 REMARK 3 T13: 0.1478 T23: -0.0987 REMARK 3 L TENSOR REMARK 3 L11: 2.2549 L22: 2.6782 REMARK 3 L33: 2.3424 L12: -0.2513 REMARK 3 L13: 0.3855 L23: -2.1492 REMARK 3 S TENSOR REMARK 3 S11: -0.4424 S12: -0.3785 S13: -0.1714 REMARK 3 S21: 0.6951 S22: 0.2342 S23: 0.4506 REMARK 3 S31: 0.2190 S32: -0.4708 S33: 0.3212 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7631 45.3311 -4.4842 REMARK 3 T TENSOR REMARK 3 T11: 0.3931 T22: 0.4509 REMARK 3 T33: 0.6030 T12: 0.0835 REMARK 3 T13: -0.0194 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 2.3228 L22: 3.2145 REMARK 3 L33: 3.1073 L12: -0.0261 REMARK 3 L13: 0.1359 L23: -0.0320 REMARK 3 S TENSOR REMARK 3 S11: 0.0970 S12: 0.3027 S13: 0.5410 REMARK 3 S21: -0.1955 S22: -0.1503 S23: 0.5339 REMARK 3 S31: -0.4507 S32: -0.4220 S33: 0.0511 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6R4B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19604 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 29.062 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.80 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 19.30 REMARK 200 R MERGE FOR SHELL (I) : 0.89900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4CEG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5: 0.5 M NACL: 0.2 M REMARK 280 MGCL2: 32.5 % V/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.12367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.24733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.18550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 145.30917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.06183 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.12367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.24733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 145.30917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 87.18550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.06183 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 640 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 119 REMARK 465 ALA A 120 REMARK 465 MET A 121 REMARK 465 GLU A 122 REMARK 465 SER A 123 REMARK 465 LYS A 124 REMARK 465 LYS A 125 REMARK 465 ARG A 126 REMARK 465 ASN A 392 REMARK 465 ALA A 393 REMARK 465 GLN A 394 REMARK 465 ASN A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 SER A 398 REMARK 465 ALA A 399 REMARK 465 SER A 400 REMARK 465 LYS A 401 REMARK 465 GLN A 402 REMARK 465 SER A 403 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 343 O HOH A 601 1.92 REMARK 500 O HOH A 655 O HOH A 660 2.12 REMARK 500 CL CL A 507 O HOH A 661 2.15 REMARK 500 OE2 GLU A 181 O HOH A 602 2.16 REMARK 500 O HOH A 654 O HOH A 656 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 -160.12 -122.55 REMARK 500 SER A 226 -55.97 76.29 REMARK 500 ARG A 255 -3.16 71.64 REMARK 500 ASP A 274 72.93 60.57 REMARK 500 ALA A 290 -81.37 -86.33 REMARK 500 ASP A 307 -149.27 -146.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 661 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 89.6 REMARK 620 3 ADP A 501 O3B 177.9 88.6 REMARK 620 4 ADP A 501 O2A 89.2 95.3 89.9 REMARK 620 5 HOH A 622 O 89.3 92.8 91.9 171.7 REMARK 620 6 HOH A 632 O 87.8 176.4 94.0 87.2 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 501 O1B 79.2 REMARK 620 3 HOH A 603 O 77.2 81.7 REMARK 620 4 HOH A 611 O 88.7 90.9 165.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JSN A 508 DBREF 6R4B A 122 403 UNP O14965 AURKA_HUMAN 122 403 SEQADV 6R4B GLY A 119 UNP O14965 EXPRESSION TAG SEQADV 6R4B ALA A 120 UNP O14965 EXPRESSION TAG SEQADV 6R4B MET A 121 UNP O14965 EXPRESSION TAG SEQADV 6R4B ALA A 290 UNP O14965 CYS 290 CONFLICT SEQADV 6R4B ALA A 393 UNP O14965 CYS 393 CONFLICT SEQRES 1 A 285 GLY ALA MET GLU SER LYS LYS ARG GLN TRP ALA LEU GLU SEQRES 2 A 285 ASP PHE GLU ILE GLY ARG PRO LEU GLY LYS GLY LYS PHE SEQRES 3 A 285 GLY ASN VAL TYR LEU ALA ARG GLU LYS GLN SER LYS PHE SEQRES 4 A 285 ILE LEU ALA LEU LYS VAL LEU PHE LYS ALA GLN LEU GLU SEQRES 5 A 285 LYS ALA GLY VAL GLU HIS GLN LEU ARG ARG GLU VAL GLU SEQRES 6 A 285 ILE GLN SER HIS LEU ARG HIS PRO ASN ILE LEU ARG LEU SEQRES 7 A 285 TYR GLY TYR PHE HIS ASP ALA THR ARG VAL TYR LEU ILE SEQRES 8 A 285 LEU GLU TYR ALA PRO LEU GLY THR VAL TYR ARG GLU LEU SEQRES 9 A 285 GLN LYS LEU SER LYS PHE ASP GLU GLN ARG THR ALA THR SEQRES 10 A 285 TYR ILE THR GLU LEU ALA ASN ALA LEU SER TYR CYS HIS SEQRES 11 A 285 SER LYS ARG VAL ILE HIS ARG ASP ILE LYS PRO GLU ASN SEQRES 12 A 285 LEU LEU LEU GLY SER ALA GLY GLU LEU LYS ILE ALA ASP SEQRES 13 A 285 PHE GLY TRP SER VAL HIS ALA PRO SER SER ARG ARG THR SEQRES 14 A 285 TPO LEU ALA GLY THR LEU ASP TYR LEU PRO PRO GLU MET SEQRES 15 A 285 ILE GLU GLY ARG MET HIS ASP GLU LYS VAL ASP LEU TRP SEQRES 16 A 285 SER LEU GLY VAL LEU CYS TYR GLU PHE LEU VAL GLY LYS SEQRES 17 A 285 PRO PRO PHE GLU ALA ASN THR TYR GLN GLU THR TYR LYS SEQRES 18 A 285 ARG ILE SER ARG VAL GLU PHE THR PHE PRO ASP PHE VAL SEQRES 19 A 285 THR GLU GLY ALA ARG ASP LEU ILE SER ARG LEU LEU LYS SEQRES 20 A 285 HIS ASN PRO SER GLN ARG PRO MET LEU ARG GLU VAL LEU SEQRES 21 A 285 GLU HIS PRO TRP ILE THR ALA ASN SER SER LYS PRO SER SEQRES 22 A 285 ASN ALA GLN ASN LYS GLU SER ALA SER LYS GLN SER MODRES 6R4B TPO A 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET ADP A 501 27 HET MG A 502 1 HET MG A 503 1 HET CL A 504 1 HET CL A 505 1 HET CL A 506 1 HET CL A 507 1 HET JSN A 508 21 HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM JSN (6~{S})-6-[2,4-BIS(FLUORANYL)PHENYL]-~{N},~{N},4- HETNAM 2 JSN TRIMETHYL-2-OXIDANYLIDENE-5,6-DIHYDRO-1~{H}- HETNAM 3 JSN PYRIMIDINE-5-CARBOXAMIDE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 CL 4(CL 1-) FORMUL 9 JSN C14 H15 F2 N3 O2 FORMUL 10 HOH *61(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 LEU A 188 1 15 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 ASP A 274 SER A 278 5 5 HELIX 8 AA8 PRO A 297 GLU A 302 1 6 HELIX 9 AA9 GLU A 308 GLY A 325 1 18 HELIX 10 AB1 THR A 333 ARG A 343 1 11 HELIX 11 AB2 THR A 353 LEU A 364 1 12 HELIX 12 AB3 ASN A 367 ARG A 371 5 5 HELIX 13 AB4 MET A 373 GLU A 379 1 7 HELIX 14 AB5 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O LEU A 161 N TYR A 148 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N GLY A 198 O ILE A 209 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK C THR A 287 N TPO A 288 1555 1555 1.33 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK OD1 ASN A 261 MG MG A 502 1555 1555 2.23 LINK OD2 ASP A 274 MG MG A 502 1555 1555 2.15 LINK OD1 ASP A 274 MG MG A 503 1555 1555 2.59 LINK O3B ADP A 501 MG MG A 502 1555 1555 1.97 LINK O2A ADP A 501 MG MG A 502 1555 1555 2.14 LINK O1B ADP A 501 MG MG A 503 1555 1555 2.34 LINK MG MG A 502 O HOH A 622 1555 1555 1.81 LINK MG MG A 502 O HOH A 632 1555 1555 2.01 LINK MG MG A 503 O HOH A 603 1555 1555 1.87 LINK MG MG A 503 O HOH A 611 1555 1555 1.87 CISPEP 1 ALA A 281 PRO A 282 0 -0.78 SITE 1 AC1 25 LEU A 139 GLY A 140 GLY A 142 LYS A 143 SITE 2 AC1 25 PHE A 144 GLY A 145 VAL A 147 ALA A 160 SITE 3 AC1 25 LYS A 162 LEU A 194 GLU A 211 ALA A 213 SITE 4 AC1 25 THR A 217 GLU A 260 ASN A 261 LEU A 263 SITE 5 AC1 25 ASP A 274 MG A 502 MG A 503 HOH A 603 SITE 6 AC1 25 HOH A 611 HOH A 622 HOH A 631 HOH A 632 SITE 7 AC1 25 HOH A 652 SITE 1 AC2 5 ASN A 261 ASP A 274 ADP A 501 HOH A 622 SITE 2 AC2 5 HOH A 632 SITE 1 AC3 4 ASP A 274 ADP A 501 HOH A 603 HOH A 611 SITE 1 AC4 2 SER A 284 ARG A 286 SITE 1 AC5 4 ARG A 255 ARG A 285 ARG A 286 THR A 287 SITE 1 AC6 3 MET A 373 LEU A 374 ARG A 375 SITE 1 AC7 1 HOH A 661 SITE 1 AC8 7 LYS A 166 GLU A 170 GLU A 175 LEU A 178 SITE 2 AC8 7 ARG A 179 TYR A 199 VAL A 206 CRYST1 81.851 81.851 174.371 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012217 0.007054 0.000000 0.00000 SCALE2 0.000000 0.014107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005735 0.00000