HEADER IMMUNE SYSTEM 29-MAR-19 6R7T TITLE CRYSTAL STRUCTURE OF HUMAN MELANOMA-ASSOCIATED ANTIGEN B1 (MAGEB1) IN TITLE 2 COMPLEX WITH NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI MAGEB1 NANOBODY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MELANOMA-ASSOCIATED ANTIGEN B1; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: CANCER/TESTIS ANTIGEN 3.1,CT3.1,DSS-AHC CRITICAL INTERVAL COMPND 9 MAGE SUPERFAMILY 10,DAM10,MAGE-B1 ANTIGEN,MAGE-XP ANTIGEN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_TAXID: 9844; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: MAGEB1, MAGEL1, MAGEXP; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS MELANOMA, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.YE,J.NEWMAN,A.C.W.PIKE,N.BURGESS-BROWN,C.D.O.COOPER,C.BOUNTRA, AUTHOR 2 C.ARROWSMITH,A.EDWARDS,O.GILEADI,F.VON DELFT REVDAT 4 24-JAN-24 6R7T 1 REMARK REVDAT 3 21-AUG-19 6R7T 1 REMARK REVDAT 2 29-MAY-19 6R7T 1 AUTHOR JRNL REMARK REVDAT 1 01-MAY-19 6R7T 0 JRNL AUTH M.YE,J.NEWMAN,A.C.W.PIKE,N.BURGESS-BROWN,C.D.O.COOPER, JRNL AUTH 2 C.BOUNTRA,C.ARROWSMITH,A.EDWARDS,O.GILEADI,F.VON DELFT JRNL TITL CRYSTAL STRUCTURE OF MELANOMA-ASSOCIATED ANTIGEN B1 (MAGEB1) JRNL TITL 2 IN COMPLEX WITH NANOBODY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 12491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.6833 - 4.2561 0.99 3204 162 0.2446 0.2320 REMARK 3 2 4.2561 - 3.3783 1.00 2930 168 0.2375 0.2960 REMARK 3 3 3.3783 - 2.9513 0.99 2872 145 0.2994 0.4019 REMARK 3 4 2.9513 - 2.6815 1.00 2860 150 0.3353 0.4153 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2454 REMARK 3 ANGLE : 0.520 3312 REMARK 3 CHIRALITY : 0.037 350 REMARK 3 PLANARITY : 0.004 423 REMARK 3 DIHEDRAL : 17.247 1452 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6R7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12641 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.680 REMARK 200 RESOLUTION RANGE LOW (A) : 53.673 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.10 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WA0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.056M SODIUM PHOSPHATE MONOBASIC - REMARK 280 1.344M POTASSIUM PHOSPHATE DIBASIC, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 120.33367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 240.66733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 180.50050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 300.83417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.16683 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 120.33367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 240.66733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 300.83417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 180.50050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 60.16683 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 99 REMARK 465 MET B 100 REMARK 465 SER B 101 REMARK 465 THR B 102 REMARK 465 GLU B 103 REMARK 465 SER B 104 REMARK 465 SER B 105 REMARK 465 VAL B 106 REMARK 465 LYS B 107 REMARK 465 VAL B 140 REMARK 465 ASP B 141 REMARK 465 GLU B 142 REMARK 465 LYS B 143 REMARK 465 TYR B 144 REMARK 465 LYS B 145 REMARK 465 GLU B 146 REMARK 465 TYR B 147 REMARK 465 GLU B 169 REMARK 465 ASP B 170 REMARK 465 ASN B 171 REMARK 465 PRO B 172 REMARK 465 SER B 173 REMARK 465 GLY B 174 REMARK 465 HIS B 175 REMARK 465 LEU B 185 REMARK 465 THR B 186 REMARK 465 ASN B 187 REMARK 465 ASP B 188 REMARK 465 GLY B 189 REMARK 465 ASN B 190 REMARK 465 LEU B 191 REMARK 465 SER B 192 REMARK 465 ASN B 193 REMARK 465 ASP B 194 REMARK 465 VAL B 262 REMARK 465 PRO B 263 REMARK 465 ASN B 264 REMARK 465 SER B 265 REMARK 465 ASP B 266 REMARK 465 PRO B 267 REMARK 465 VAL B 319 REMARK 465 ARG B 320 REMARK 465 SER B 321 REMARK 465 SER B 322 REMARK 465 VAL B 323 REMARK 465 ARG B 324 REMARK 465 ALA B 325 REMARK 465 ARG B 326 REMARK 465 ARG B 327 REMARK 465 ARG B 328 REMARK 465 THR B 329 REMARK 465 THR B 330 REMARK 465 ALA B 331 REMARK 465 THR B 332 REMARK 465 THR B 333 REMARK 465 PHE B 334 REMARK 465 ARG B 335 REMARK 465 ALA B 336 REMARK 465 ARG B 337 REMARK 465 SER B 338 REMARK 465 ARG B 339 REMARK 465 ALA B 340 REMARK 465 PRO B 341 REMARK 465 PHE B 342 REMARK 465 SER B 343 REMARK 465 ARG B 344 REMARK 465 SER B 345 REMARK 465 SER B 346 REMARK 465 HIS B 347 REMARK 465 PRO B 348 REMARK 465 MET B 349 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 ASP B 196 CG OD1 OD2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 GLN B 261 CD OE1 NE2 REMARK 470 ASN B 295 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 423 O HOH B 425 1.92 REMARK 500 O HOH A 204 O HOH A 214 2.02 REMARK 500 N ARG B 269 O HOH B 401 2.05 REMARK 500 O LYS A 66 O HOH A 201 2.10 REMARK 500 N ASP A 63 O HOH A 202 2.10 REMARK 500 NH1 ARG B 199 O HOH B 402 2.11 REMARK 500 O VAL B 252 O HOH B 403 2.12 REMARK 500 O HOH B 422 O HOH B 426 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 216 O HOH B 426 8555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 128 37.39 -78.69 REMARK 500 ASP B 166 -91.39 -70.84 REMARK 500 LEU B 183 -109.02 57.49 REMARK 500 PHE B 197 69.18 -117.04 REMARK 500 LYS B 213 48.08 -86.77 REMARK 500 ASN B 215 27.13 -140.20 REMARK 500 ALA B 297 -55.69 -158.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 216 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 427 DISTANCE = 6.85 ANGSTROMS DBREF 6R7T A 1 123 PDB 6R7T 6R7T 1 123 DBREF 6R7T B 101 349 UNP P43366 MAGB1_HUMAN 99 347 SEQADV 6R7T SER B 99 UNP P43366 EXPRESSION TAG SEQADV 6R7T MET B 100 UNP P43366 EXPRESSION TAG SEQADV 6R7T GLU B 146 UNP P43366 ASP 144 CONFLICT SEQADV 6R7T TYR B 147 UNP P43366 HIS 145 CONFLICT SEQRES 1 A 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 123 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 123 PHE THR PHE SER THR TYR ALA MET SER TRP PHE ARG GLN SEQRES 4 A 123 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE ASN SEQRES 5 A 123 SER SER GLY GLY GLY ILE GLN SER TYR ALA ASP SER VAL SEQRES 6 A 123 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 A 123 THR LEU TYR LEU GLN MET ASN SER LEU GLU PRO GLU ASP SEQRES 8 A 123 THR ALA VAL TYR TYR CYS ALA ALA ALA ALA TRP ARG VAL SEQRES 9 A 123 GLY THR TYR ASP TYR ARG GLY GLN GLY THR GLN VAL THR SEQRES 10 A 123 VAL SER SER SER LYS GLY SEQRES 1 B 251 SER MET SER THR GLU SER SER VAL LYS ASP PRO VAL ALA SEQRES 2 B 251 TRP GLU ALA GLY MET LEU MET HIS PHE ILE LEU ARG LYS SEQRES 3 B 251 TYR LYS MET ARG GLU PRO ILE MET LYS ALA ASP MET LEU SEQRES 4 B 251 LYS VAL VAL ASP GLU LYS TYR LYS GLU TYR PHE THR GLU SEQRES 5 B 251 ILE LEU ASN GLY ALA SER ARG ARG LEU GLU LEU VAL PHE SEQRES 6 B 251 GLY LEU ASP LEU LYS GLU ASP ASN PRO SER GLY HIS THR SEQRES 7 B 251 TYR THR LEU VAL SER LYS LEU ASN LEU THR ASN ASP GLY SEQRES 8 B 251 ASN LEU SER ASN ASP TRP ASP PHE PRO ARG ASN GLY LEU SEQRES 9 B 251 LEU MET PRO LEU LEU GLY VAL ILE PHE LEU LYS GLY ASN SEQRES 10 B 251 SER ALA THR GLU GLU GLU ILE TRP LYS PHE MET ASN VAL SEQRES 11 B 251 LEU GLY ALA TYR ASP GLY GLU GLU HIS LEU ILE TYR GLY SEQRES 12 B 251 GLU PRO ARG LYS PHE ILE THR GLN ASP LEU VAL GLN GLU SEQRES 13 B 251 LYS TYR LEU LYS TYR GLU GLN VAL PRO ASN SER ASP PRO SEQRES 14 B 251 PRO ARG TYR GLN PHE LEU TRP GLY PRO ARG ALA TYR ALA SEQRES 15 B 251 GLU THR THR LYS MET LYS VAL LEU GLU PHE LEU ALA LYS SEQRES 16 B 251 MET ASN GLY ALA THR PRO ARG ASP PHE PRO SER HIS TYR SEQRES 17 B 251 GLU GLU ALA LEU ARG ASP GLU GLU GLU ARG ALA GLN VAL SEQRES 18 B 251 ARG SER SER VAL ARG ALA ARG ARG ARG THR THR ALA THR SEQRES 19 B 251 THR PHE ARG ALA ARG SER ARG ALA PRO PHE SER ARG SER SEQRES 20 B 251 SER HIS PRO MET FORMUL 3 HOH *43(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 ASP A 63 LYS A 66 5 4 HELIX 3 AA3 GLU A 88 THR A 92 5 5 HELIX 4 AA4 PRO B 109 MET B 127 1 19 HELIX 5 AA5 MET B 132 VAL B 139 1 8 HELIX 6 AA6 THR B 149 PHE B 163 1 15 HELIX 7 AA7 PHE B 197 GLY B 201 5 5 HELIX 8 AA8 LEU B 202 LYS B 213 1 12 HELIX 9 AA9 GLU B 219 LEU B 229 1 11 HELIX 10 AB1 GLU B 242 GLN B 249 1 8 HELIX 11 AB2 GLN B 249 GLU B 254 1 6 HELIX 12 AB3 GLY B 275 THR B 282 1 8 HELIX 13 AB4 THR B 283 MET B 294 1 12 HELIX 14 AB5 THR B 298 ASP B 301 5 4 HELIX 15 AB6 PHE B 302 GLN B 318 1 17 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 21 N SER A 7 SHEET 3 AA1 4 THR A 79 MET A 84 -1 O MET A 84 N LEU A 18 SHEET 4 AA1 4 PHE A 69 ASP A 74 -1 N THR A 70 O GLN A 83 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 114 VAL A 118 1 O THR A 117 N VAL A 12 SHEET 3 AA2 6 ALA A 93 ALA A 100 -1 N TYR A 95 O THR A 114 SHEET 4 AA2 6 MET A 34 GLN A 39 -1 N GLN A 39 O VAL A 94 SHEET 5 AA2 6 LEU A 45 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 GLN A 59 TYR A 61 -1 O SER A 60 N SER A 50 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 114 VAL A 118 1 O THR A 117 N VAL A 12 SHEET 3 AA3 4 ALA A 93 ALA A 100 -1 N TYR A 95 O THR A 114 SHEET 4 AA3 4 TYR A 107 ARG A 110 -1 O TYR A 109 N ALA A 99 SHEET 1 AA4 3 ALA B 217 THR B 218 0 SHEET 2 AA4 3 GLN B 271 TRP B 274 -1 O PHE B 272 N ALA B 217 SHEET 3 AA4 3 LEU B 257 GLU B 260 -1 N GLU B 260 O GLN B 271 SSBOND 1 CYS A 22 CYS A 97 1555 1555 2.03 CRYST1 61.976 61.976 361.001 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016135 0.009316 0.000000 0.00000 SCALE2 0.000000 0.018632 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002770 0.00000