HEADER TRANSFERASE 16-APR-19 6RFP TITLE ERK2 MAP KINASE WITH MUTATIONS AT HELIX-G COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAPK 1,ERT1,EXTRACELLULAR SIGNAL-REGULATED KINASE 2,ERK-2, COMPND 5 MAP KINASE ISOFORM P42,P42-MAPK,MITOGEN-ACTIVATED PROTEIN KINASE 2, COMPND 6 MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: MAPK1, ERK2, MAPK, PRKM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NLED, EFFECTORS, T3SS, MAP KINASE, PHOSPHORYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.LIVNAH,M.EITAN-WEXLER REVDAT 5 24-JAN-24 6RFP 1 REMARK REVDAT 4 22-JUL-20 6RFP 1 JRNL REVDAT 3 27-MAY-20 6RFP 1 JRNL REVDAT 2 20-MAY-20 6RFP 1 JRNL REVDAT 1 13-MAY-20 6RFP 0 JRNL AUTH L.GUR-ARIE,M.EITAN-WEXLER,N.WEINBERGER,I.ROSENSHINE,O.LIVNAH JRNL TITL THE BACTERIAL METALLOPROTEASE NLED SELECTIVELY CLEAVES JRNL TITL 2 MITOGEN-ACTIVATED PROTEIN KINASES THAT HAVE HIGH FLEXIBILITY JRNL TITL 3 IN THEIR ACTIVATION LOOP. JRNL REF J.BIOL.CHEM. V. 295 9409 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32404367 JRNL DOI 10.1074/JBC.RA120.013590 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 36513 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1925 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2659 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 172 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2747 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 227 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.77000 REMARK 3 B22 (A**2) : -1.07000 REMARK 3 B33 (A**2) : 1.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.14000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.377 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2823 ; 0.016 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2662 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3820 ; 1.967 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6182 ; 1.495 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 6.895 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;36.348 ;22.403 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 506 ;17.582 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;24.416 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 370 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3082 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 580 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1351 ; 5.965 ; 3.363 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1350 ; 5.946 ; 3.362 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1680 ; 6.640 ; 5.026 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1681 ; 6.645 ; 5.027 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1472 ; 7.740 ; 4.029 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1470 ; 7.742 ; 4.029 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2140 ; 8.925 ; 5.801 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3285 ; 8.605 ;41.323 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3251 ; 8.616 ;41.098 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5485 ; 4.687 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6RFP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-APR-19. REMARK 100 THE DEPOSITION ID IS D_1292101879. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38438 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 45.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.66100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4S31 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE 0.1 M BIS-TRIS REMARK 280 PH 6.8 OR 6.5 2% (W/V) PEG 550, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.40500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 VAL A -4 REMARK 465 PRO A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 HIS A 1 REMARK 465 MET A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 8A REMARK 465 PRO A 8B REMARK 465 GLU A 8C REMARK 465 MET A 8D REMARK 465 VAL A 8E REMARK 465 ARG A 8F REMARK 465 GLY A 8G REMARK 465 GLY A 20 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 TYR A 34 REMARK 465 GLU A 58 REMARK 465 ASP A 334 REMARK 465 ASP A 335 REMARK 465 PRO A 354 REMARK 465 GLY A 355 REMARK 465 TYR A 356 REMARK 465 ARG A 357 REMARK 465 SER A 358 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 557 O HOH A 559 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 8 C ALA A 8 O 0.167 REMARK 500 GLU A 248 CD GLU A 248 OE1 -0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 146 CD - NE - CZ ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 146 NE - CZ - NH1 ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 146 NE - CZ - NH2 ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG A 170 CG - CD - NE ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG A 189 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 192 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 192 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 24 -74.16 -88.85 REMARK 500 ILE A 29 76.08 -172.65 REMARK 500 SER A 55 78.14 -119.30 REMARK 500 ASP A 147 45.08 -146.27 REMARK 500 ASP A 165 82.36 70.53 REMARK 500 ASP A 173 66.57 -153.45 REMARK 500 ASN A 199 15.81 -164.22 REMARK 500 LEU A 292 54.47 -97.87 REMARK 500 ASP A 316 88.90 -156.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 89 0.08 SIDE CHAIN REMARK 500 ARG A 146 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 6RFP A 2 358 UNP P63086 MK01_RAT 1 358 SEQADV 6RFP MET A -18 UNP P63086 INITIATING METHIONINE SEQADV 6RFP GLY A -17 UNP P63086 EXPRESSION TAG SEQADV 6RFP SER A -16 UNP P63086 EXPRESSION TAG SEQADV 6RFP SER A -15 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -14 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -13 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -12 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -11 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -10 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A -9 UNP P63086 EXPRESSION TAG SEQADV 6RFP SER A -8 UNP P63086 EXPRESSION TAG SEQADV 6RFP SER A -7 UNP P63086 EXPRESSION TAG SEQADV 6RFP GLY A -6 UNP P63086 EXPRESSION TAG SEQADV 6RFP LEU A -5 UNP P63086 EXPRESSION TAG SEQADV 6RFP VAL A -4 UNP P63086 EXPRESSION TAG SEQADV 6RFP PRO A -3 UNP P63086 EXPRESSION TAG SEQADV 6RFP ARG A -2 UNP P63086 EXPRESSION TAG SEQADV 6RFP GLY A -1 UNP P63086 EXPRESSION TAG SEQADV 6RFP SER A 0 UNP P63086 EXPRESSION TAG SEQADV 6RFP HIS A 1 UNP P63086 EXPRESSION TAG SEQADV 6RFP THR A 229 UNP P63086 LYS 229 ENGINEERED MUTATION SEQADV 6RFP ASP A 230 UNP P63086 HIS 230 ENGINEERED MUTATION SEQADV 6RFP HIS A 231 UNP P63086 TYR 231 ENGINEERED MUTATION SEQRES 1 A 378 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 378 LEU VAL PRO ARG GLY SER HIS MET ALA ALA ALA ALA ALA SEQRES 3 A 378 ALA GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL SEQRES 4 A 378 GLY PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY SEQRES 5 A 378 ALA TYR GLY MET VAL CYS SER ALA TYR ASP ASN LEU ASN SEQRES 6 A 378 LYS VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU SEQRES 7 A 378 HIS GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS SEQRES 8 A 378 ILE LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE SEQRES 9 A 378 ASN ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS SEQRES 10 A 378 ASP VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU SEQRES 11 A 378 TYR LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS SEQRES 12 A 378 ILE CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS SEQRES 13 A 378 TYR ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS SEQRES 14 A 378 PRO SER ASN LEU LEU LEU ASN THR THR CYS ASP LEU LYS SEQRES 15 A 378 ILE CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP SEQRES 16 A 378 HIS ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR SEQRES 17 A 378 ARG TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS SEQRES 18 A 378 GLY TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS SEQRES 19 A 378 ILE LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO SEQRES 20 A 378 GLY THR ASP HIS LEU ASP GLN LEU ASN HIS ILE LEU GLY SEQRES 21 A 378 ILE LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE SEQRES 22 A 378 ILE ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO SEQRES 23 A 378 HIS LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN SEQRES 24 A 378 ALA ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU SEQRES 25 A 378 THR PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA SEQRES 26 A 378 LEU ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER SEQRES 27 A 378 ASP GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET SEQRES 28 A 378 GLU LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU SEQRES 29 A 378 ILE PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SEQRES 30 A 378 SER FORMUL 2 HOH *227(H2 O) HELIX 1 AA1 GLN A 60 PHE A 76 1 17 HELIX 2 AA2 LEU A 110 GLN A 117 1 8 HELIX 3 AA3 SER A 120 ALA A 141 1 22 HELIX 4 AA4 LYS A 149 SER A 151 5 3 HELIX 5 AA5 ASP A 173 ASP A 177 5 5 HELIX 6 AA6 THR A 188 ARG A 192 5 5 HELIX 7 AA7 ALA A 193 ASN A 199 1 7 HELIX 8 AA8 LYS A 205 ASN A 222 1 18 HELIX 9 AA9 ASP A 230 GLY A 243 1 14 HELIX 10 AB1 SER A 246 CYS A 252 1 7 HELIX 11 AB2 ASN A 255 LEU A 265 1 11 HELIX 12 AB3 PRO A 272 PHE A 277 1 6 HELIX 13 AB4 ASP A 281 LEU A 292 1 12 HELIX 14 AB5 GLU A 301 ALA A 307 1 7 HELIX 15 AB6 HIS A 308 GLU A 312 5 5 HELIX 16 AB7 ASP A 316 GLU A 320 5 5 HELIX 17 AB8 PRO A 337 THR A 349 1 13 HELIX 18 AB9 ALA A 350 GLN A 353 5 4 SHEET 1 AA1 5 TYR A 23 TYR A 28 0 SHEET 2 AA1 5 VAL A 37 ASP A 42 -1 O SER A 39 N SER A 27 SHEET 3 AA1 5 VAL A 47 ILE A 54 -1 O VAL A 47 N ASP A 42 SHEET 4 AA1 5 VAL A 99 ASP A 104 -1 O VAL A 99 N ILE A 54 SHEET 5 AA1 5 ASP A 86 ILE A 88 -1 N ASP A 86 O VAL A 102 SHEET 1 AA2 3 THR A 108 ASP A 109 0 SHEET 2 AA2 3 LEU A 153 LEU A 155 -1 O LEU A 155 N THR A 108 SHEET 3 AA2 3 LEU A 161 ILE A 163 -1 O LYS A 162 N LEU A 154 SHEET 1 AA3 2 VAL A 143 LEU A 144 0 SHEET 2 AA3 2 ARG A 170 VAL A 171 -1 O ARG A 170 N LEU A 144 CRYST1 48.740 68.810 60.810 90.00 110.14 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020517 0.000000 0.007523 0.00000 SCALE2 0.000000 0.014533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017515 0.00000