HEADER SIGNALING PROTEIN 19-APR-19 6RH8 TITLE REVISITING PH-GATED CONFORMATIONAL SWITCH. COMPLEX HK853 MUTANT H260A TITLE 2 -RR468 MUTANT D53A PH 5.3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SENSOR HISTIDINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RESPONSE REGULATOR; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM_0853; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / SOURCE 9 DSM 3109 / JCM 10099); SOURCE 10 ORGANISM_TAXID: 243274; SOURCE 11 STRAIN: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099; SOURCE 12 GENE: TM_0468; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HISTIDINE KINASE, RESPONSE REGULATOR, PHOSPHOTRANSFER, PHOSPHATASE, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.MIDEROS-MORA,P.CASINO,A.MARINA REVDAT 3 06-NOV-24 6RH8 1 REMARK REVDAT 2 24-JAN-24 6RH8 1 REMARK REVDAT 1 19-FEB-20 6RH8 0 JRNL AUTH C.MIDEROS-MORA,L.MIGUEL-ROMERO,A.FELIPE-RUIZ,P.CASINO, JRNL AUTH 2 A.MARINA JRNL TITL REVISITING THE PH-GATED CONFORMATIONAL SWITCH ON THE JRNL TITL 2 ACTIVITIES OF HISKA-FAMILY HISTIDINE KINASES. JRNL REF NAT COMMUN V. 11 769 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32034139 JRNL DOI 10.1038/S41467-020-14540-5 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 80390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4149 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5821 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 317 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 149 REMARK 3 SOLVENT ATOMS : 488 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.92000 REMARK 3 B22 (A**2) : 1.43000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.77000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.931 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5940 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5712 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8041 ; 1.994 ; 2.013 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13277 ; 1.092 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 716 ; 6.405 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;37.470 ;25.135 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1123 ;16.412 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;19.260 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 942 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6307 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1092 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2864 ; 4.285 ; 4.179 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2863 ; 4.280 ; 4.176 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3574 ; 5.568 ; 6.234 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3575 ; 5.570 ; 6.237 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3076 ; 5.656 ; 4.946 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2997 ; 5.384 ; 4.866 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4346 ; 8.069 ; 7.019 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6634 ;10.407 ;50.876 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6635 ;10.406 ;50.872 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6RH8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-APR-19. REMARK 100 THE DEPOSITION ID IS D_1292101950. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979260 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84541 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 87.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB 3DGE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1,2M NH4SO4, 0,1M BISTRIS PH 5.3, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 28.76362 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.09450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.33386 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 28.76362 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 46.09450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 87.33386 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -305.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 232 REMARK 465 GLU A 233 REMARK 465 ASN A 234 REMARK 465 VAL A 235 REMARK 465 THR A 236 REMARK 465 GLU A 237 REMARK 465 SER A 238 REMARK 465 LYS A 239 REMARK 465 GLU A 240 REMARK 465 LEU A 241 REMARK 465 GLU A 242 REMARK 465 ARG A 480 REMARK 465 ALA A 481 REMARK 465 GLY A 482 REMARK 465 GLU A 483 REMARK 465 ASP A 484 REMARK 465 ASN A 485 REMARK 465 ARG A 486 REMARK 465 GLN A 487 REMARK 465 ASP A 488 REMARK 465 ASN A 489 REMARK 465 VAL B 232 REMARK 465 GLU B 233 REMARK 465 ASN B 234 REMARK 465 VAL B 235 REMARK 465 THR B 236 REMARK 465 GLU B 237 REMARK 465 SER B 238 REMARK 465 LYS B 239 REMARK 465 GLU B 240 REMARK 465 LEU B 241 REMARK 465 GLU B 242 REMARK 465 ARG B 480 REMARK 465 ALA B 481 REMARK 465 GLY B 482 REMARK 465 GLU B 483 REMARK 465 ASP B 484 REMARK 465 ASN B 485 REMARK 465 ARG B 486 REMARK 465 GLN B 487 REMARK 465 ASP B 488 REMARK 465 ASN B 489 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 249 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP C 10 O HOH C 301 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 246 99.99 -55.44 REMARK 500 ASN A 412 41.37 -109.25 REMARK 500 PHE A 428 -3.12 74.69 REMARK 500 ARG B 246 92.28 -61.61 REMARK 500 LYS B 318 6.48 53.12 REMARK 500 ASN B 412 42.63 -107.99 REMARK 500 PHE B 428 -1.04 72.15 REMARK 500 VAL C 58 -57.81 68.40 REMARK 500 VAL D 58 -58.54 69.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 206 DBREF 6RH8 A 232 489 UNP Q9WZV7 Q9WZV7_THEMA 232 489 DBREF 6RH8 B 232 489 UNP Q9WZV7 Q9WZV7_THEMA 232 489 DBREF 6RH8 C 1 122 UNP Q9WYT9 Q9WYT9_THEMA 1 122 DBREF 6RH8 D 1 122 UNP Q9WYT9 Q9WYT9_THEMA 1 122 SEQADV 6RH8 ALA A 260 UNP Q9WZV7 HIS 260 CONFLICT SEQADV 6RH8 ALA B 260 UNP Q9WZV7 HIS 260 CONFLICT SEQADV 6RH8 ALA C 53 UNP Q9WYT9 ASP 53 ENGINEERED MUTATION SEQADV 6RH8 ALA D 53 UNP Q9WYT9 ASP 53 ENGINEERED MUTATION SEQRES 1 A 258 VAL GLU ASN VAL THR GLU SER LYS GLU LEU GLU ARG LEU SEQRES 2 A 258 LYS ARG ILE ASP ARG MET LYS THR GLU PHE ILE ALA ASN SEQRES 3 A 258 ILE SER ALA GLU LEU ARG THR PRO LEU THR ALA ILE LYS SEQRES 4 A 258 ALA TYR ALA GLU THR ILE TYR ASN SER LEU GLY GLU LEU SEQRES 5 A 258 ASP LEU SER THR LEU LYS GLU PHE LEU GLU VAL ILE ILE SEQRES 6 A 258 ASP GLN SER ASN HIS LEU GLU ASN LEU LEU ASN GLU LEU SEQRES 7 A 258 LEU ASP PHE SER ARG LEU GLU ARG LYS SER LEU GLN ILE SEQRES 8 A 258 ASN ARG GLU LYS VAL ASP LEU CYS ASP LEU VAL GLU SER SEQRES 9 A 258 ALA VAL ASN ALA ILE LYS GLU PHE ALA SER SER HIS ASN SEQRES 10 A 258 VAL ASN VAL LEU PHE GLU SER ASN VAL PRO CYS PRO VAL SEQRES 11 A 258 GLU ALA TYR ILE ASP PRO THR ARG ILE ARG GLN VAL LEU SEQRES 12 A 258 LEU ASN LEU LEU ASN ASN GLY VAL LYS TYR SER LYS LYS SEQRES 13 A 258 ASP ALA PRO ASP LYS TYR VAL LYS VAL ILE LEU ASP GLU SEQRES 14 A 258 LYS ASP GLY GLY VAL LEU ILE ILE VAL GLU ASP ASN GLY SEQRES 15 A 258 ILE GLY ILE PRO ASP HIS ALA LYS ASP ARG ILE PHE GLU SEQRES 16 A 258 GLN PHE TYR ARG VAL ASP SER SER LEU THR TYR GLU VAL SEQRES 17 A 258 PRO GLY THR GLY LEU GLY LEU ALA ILE THR LYS GLU ILE SEQRES 18 A 258 VAL GLU LEU HIS GLY GLY ARG ILE TRP VAL GLU SER GLU SEQRES 19 A 258 VAL GLY LYS GLY SER ARG PHE PHE VAL TRP ILE PRO LYS SEQRES 20 A 258 ASP ARG ALA GLY GLU ASP ASN ARG GLN ASP ASN SEQRES 1 B 258 VAL GLU ASN VAL THR GLU SER LYS GLU LEU GLU ARG LEU SEQRES 2 B 258 LYS ARG ILE ASP ARG MET LYS THR GLU PHE ILE ALA ASN SEQRES 3 B 258 ILE SER ALA GLU LEU ARG THR PRO LEU THR ALA ILE LYS SEQRES 4 B 258 ALA TYR ALA GLU THR ILE TYR ASN SER LEU GLY GLU LEU SEQRES 5 B 258 ASP LEU SER THR LEU LYS GLU PHE LEU GLU VAL ILE ILE SEQRES 6 B 258 ASP GLN SER ASN HIS LEU GLU ASN LEU LEU ASN GLU LEU SEQRES 7 B 258 LEU ASP PHE SER ARG LEU GLU ARG LYS SER LEU GLN ILE SEQRES 8 B 258 ASN ARG GLU LYS VAL ASP LEU CYS ASP LEU VAL GLU SER SEQRES 9 B 258 ALA VAL ASN ALA ILE LYS GLU PHE ALA SER SER HIS ASN SEQRES 10 B 258 VAL ASN VAL LEU PHE GLU SER ASN VAL PRO CYS PRO VAL SEQRES 11 B 258 GLU ALA TYR ILE ASP PRO THR ARG ILE ARG GLN VAL LEU SEQRES 12 B 258 LEU ASN LEU LEU ASN ASN GLY VAL LYS TYR SER LYS LYS SEQRES 13 B 258 ASP ALA PRO ASP LYS TYR VAL LYS VAL ILE LEU ASP GLU SEQRES 14 B 258 LYS ASP GLY GLY VAL LEU ILE ILE VAL GLU ASP ASN GLY SEQRES 15 B 258 ILE GLY ILE PRO ASP HIS ALA LYS ASP ARG ILE PHE GLU SEQRES 16 B 258 GLN PHE TYR ARG VAL ASP SER SER LEU THR TYR GLU VAL SEQRES 17 B 258 PRO GLY THR GLY LEU GLY LEU ALA ILE THR LYS GLU ILE SEQRES 18 B 258 VAL GLU LEU HIS GLY GLY ARG ILE TRP VAL GLU SER GLU SEQRES 19 B 258 VAL GLY LYS GLY SER ARG PHE PHE VAL TRP ILE PRO LYS SEQRES 20 B 258 ASP ARG ALA GLY GLU ASP ASN ARG GLN ASP ASN SEQRES 1 C 122 MET SER LYS LYS VAL LEU LEU VAL ASP ASP SER ALA VAL SEQRES 2 C 122 LEU ARG LYS ILE VAL SER PHE ASN LEU LYS LYS GLU GLY SEQRES 3 C 122 TYR GLU VAL ILE GLU ALA GLU ASN GLY GLN ILE ALA LEU SEQRES 4 C 122 GLU LYS LEU SER GLU PHE THR PRO ASP LEU ILE VAL LEU SEQRES 5 C 122 ALA ILE MET MET PRO VAL MET ASP GLY PHE THR VAL LEU SEQRES 6 C 122 LYS LYS LEU GLN GLU LYS GLU GLU TRP LYS ARG ILE PRO SEQRES 7 C 122 VAL ILE VAL LEU THR ALA LYS GLY GLY GLU GLU ASP GLU SEQRES 8 C 122 SER LEU ALA LEU SER LEU GLY ALA ARG LYS VAL MET ARG SEQRES 9 C 122 LYS PRO PHE SER PRO SER GLN PHE ILE GLU GLU VAL LYS SEQRES 10 C 122 HIS LEU LEU ASN GLU SEQRES 1 D 122 MET SER LYS LYS VAL LEU LEU VAL ASP ASP SER ALA VAL SEQRES 2 D 122 LEU ARG LYS ILE VAL SER PHE ASN LEU LYS LYS GLU GLY SEQRES 3 D 122 TYR GLU VAL ILE GLU ALA GLU ASN GLY GLN ILE ALA LEU SEQRES 4 D 122 GLU LYS LEU SER GLU PHE THR PRO ASP LEU ILE VAL LEU SEQRES 5 D 122 ALA ILE MET MET PRO VAL MET ASP GLY PHE THR VAL LEU SEQRES 6 D 122 LYS LYS LEU GLN GLU LYS GLU GLU TRP LYS ARG ILE PRO SEQRES 7 D 122 VAL ILE VAL LEU THR ALA LYS GLY GLY GLU GLU ASP GLU SEQRES 8 D 122 SER LEU ALA LEU SER LEU GLY ALA ARG LYS VAL MET ARG SEQRES 9 D 122 LYS PRO PHE SER PRO SER GLN PHE ILE GLU GLU VAL LYS SEQRES 10 D 122 HIS LEU LEU ASN GLU HET ADP A 501 27 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET ADP B 501 27 HET SO4 B 502 5 HET SO4 B 503 5 HET SO4 B 504 5 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 C 203 5 HET SO4 C 204 5 HET SO4 C 205 5 HET SO4 C 206 5 HET SO4 D 201 5 HET SO4 D 202 5 HET SO4 D 203 5 HET SO4 D 204 5 HET SO4 D 205 5 HET SO4 D 206 5 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 6 SO4 19(O4 S 2-) FORMUL 26 HOH *488(H2 O) HELIX 1 AA1 ILE A 247 SER A 279 1 33 HELIX 2 AA2 LEU A 280 LEU A 283 5 4 HELIX 3 AA3 ASP A 284 ARG A 317 1 34 HELIX 4 AA4 LEU A 329 ILE A 340 1 12 HELIX 5 AA5 ILE A 340 HIS A 347 1 8 HELIX 6 AA6 ASP A 366 TYR A 384 1 19 HELIX 7 AA7 PRO A 417 ASP A 422 1 6 HELIX 8 AA8 LEU A 444 HIS A 456 1 13 HELIX 9 AA9 ILE B 247 SER B 279 1 33 HELIX 10 AB1 LEU B 280 LEU B 283 5 4 HELIX 11 AB2 ASP B 284 ARG B 317 1 34 HELIX 12 AB3 LEU B 329 ILE B 340 1 12 HELIX 13 AB4 ILE B 340 HIS B 347 1 8 HELIX 14 AB5 ASP B 366 TYR B 384 1 19 HELIX 15 AB6 PRO B 417 ASP B 422 1 6 HELIX 16 AB7 LEU B 444 HIS B 456 1 13 HELIX 17 AB8 SER C 11 GLU C 25 1 15 HELIX 18 AB9 ASN C 34 LEU C 42 1 9 HELIX 19 AC1 ASP C 60 GLU C 70 1 11 HELIX 20 AC2 GLU C 73 ILE C 77 5 5 HELIX 21 AC3 GLY C 87 LEU C 97 1 11 HELIX 22 AC4 SER C 108 GLU C 122 1 15 HELIX 23 AC5 SER D 11 GLU D 25 1 15 HELIX 24 AC6 ASN D 34 LEU D 42 1 9 HELIX 25 AC7 ASP D 60 GLU D 70 1 11 HELIX 26 AC8 LYS D 71 ARG D 76 1 6 HELIX 27 AC9 GLY D 87 LEU D 97 1 11 HELIX 28 AD1 SER D 108 GLU D 122 1 15 SHEET 1 AA1 2 GLU A 325 ASP A 328 0 SHEET 2 AA1 2 GLU A 362 ILE A 365 -1 O ALA A 363 N VAL A 327 SHEET 1 AA2 5 ASN A 350 SER A 355 0 SHEET 2 AA2 5 TYR A 393 LYS A 401 1 O VAL A 396 N LEU A 352 SHEET 3 AA2 5 GLY A 404 ASP A 411 -1 O GLU A 410 N LYS A 395 SHEET 4 AA2 5 GLY A 469 PRO A 477 -1 O ILE A 476 N VAL A 405 SHEET 5 AA2 5 ARG A 459 GLU A 465 -1 N GLU A 463 O ARG A 471 SHEET 1 AA3 2 GLU B 325 ASP B 328 0 SHEET 2 AA3 2 GLU B 362 ILE B 365 -1 O ALA B 363 N VAL B 327 SHEET 1 AA4 5 ASN B 350 SER B 355 0 SHEET 2 AA4 5 TYR B 393 LYS B 401 1 O VAL B 396 N GLU B 354 SHEET 3 AA4 5 GLY B 404 ASP B 411 -1 O ILE B 408 N ILE B 397 SHEET 4 AA4 5 GLY B 469 PRO B 477 -1 O VAL B 474 N ILE B 407 SHEET 5 AA4 5 ARG B 459 GLU B 465 -1 N GLU B 463 O ARG B 471 SHEET 1 AA5 5 GLU C 28 ALA C 32 0 SHEET 2 AA5 5 LYS C 4 VAL C 8 1 N LEU C 7 O ILE C 30 SHEET 3 AA5 5 LEU C 49 LEU C 52 1 O VAL C 51 N VAL C 8 SHEET 4 AA5 5 VAL C 79 THR C 83 1 O ILE C 80 N ILE C 50 SHEET 5 AA5 5 LYS C 101 ARG C 104 1 O MET C 103 N VAL C 81 SHEET 1 AA6 5 GLU D 28 ALA D 32 0 SHEET 2 AA6 5 LYS D 4 VAL D 8 1 N LEU D 7 O ILE D 30 SHEET 3 AA6 5 LEU D 49 LEU D 52 1 O VAL D 51 N VAL D 8 SHEET 4 AA6 5 VAL D 79 THR D 83 1 O ILE D 80 N ILE D 50 SHEET 5 AA6 5 LYS D 101 ARG D 104 1 O MET D 103 N VAL D 81 SSBOND 1 CYS A 330 CYS A 359 1555 1555 2.06 SSBOND 2 CYS B 330 CYS B 359 1555 1555 2.06 CISPEP 1 CYS A 359 PRO A 360 0 4.31 CISPEP 2 CYS B 359 PRO B 360 0 10.01 CISPEP 3 LYS C 105 PRO C 106 0 0.76 CISPEP 4 LYS D 105 PRO D 106 0 4.25 SITE 1 AC1 22 ASN A 376 ASN A 380 LYS A 383 TYR A 384 SITE 2 AC1 22 ASP A 411 ILE A 416 ILE A 424 TYR A 429 SITE 3 AC1 22 ARG A 430 VAL A 431 GLY A 441 THR A 442 SITE 4 AC1 22 GLY A 443 GLY A 445 LEU A 446 HOH A 632 SITE 5 AC1 22 HOH A 634 HOH A 649 HOH A 655 HOH A 661 SITE 6 AC1 22 HOH A 666 HOH A 680 SITE 1 AC2 8 ASN A 300 HIS A 301 ASN A 304 HOH A 604 SITE 2 AC2 8 HOH A 606 HOH A 607 HOH A 668 HOH A 685 SITE 1 AC3 5 LYS A 270 GLU A 274 HOH A 605 ASN B 300 SITE 2 AC3 5 SER C 108 SITE 1 AC4 3 PRO A 417 ASP A 418 HIS A 419 SITE 1 AC5 3 ARG A 246 GLU A 426 GLN A 427 SITE 1 AC6 22 ASN B 376 ASN B 380 LYS B 383 TYR B 384 SITE 2 AC6 22 ASP B 411 ILE B 416 ILE B 424 TYR B 429 SITE 3 AC6 22 ARG B 430 VAL B 431 GLY B 441 THR B 442 SITE 4 AC6 22 GLY B 443 GLY B 445 LEU B 446 HOH B 612 SITE 5 AC6 22 HOH B 621 HOH B 630 HOH B 645 HOH B 651 SITE 6 AC6 22 HOH B 657 HOH B 682 SITE 1 AC7 6 ASN A 300 LYS B 270 GLU B 274 SER D 108 SITE 2 AC7 6 GLN D 111 HOH D 312 SITE 1 AC8 5 HIS B 301 ASN B 304 HOH B 601 HOH B 637 SITE 2 AC8 5 HOH B 668 SITE 1 AC9 3 ARG B 246 GLN B 427 HOH B 623 SITE 1 AD1 4 GLU A 400 LYS A 401 ASP A 402 LYS C 85 SITE 1 AD2 7 ALA C 53 ILE C 54 MET C 55 THR C 83 SITE 2 AD2 7 ALA C 84 LYS C 105 HOH C 301 SITE 1 AD3 8 HOH A 692 ASP C 10 SER C 11 ALA C 12 SITE 2 AD3 8 VAL C 13 HOH C 304 HOH C 321 HOH C 343 SITE 1 AD4 5 VAL C 102 MET C 103 ARG C 104 HOH C 305 SITE 2 AD4 5 HOH C 323 SITE 1 AD5 3 ARG C 100 HIS C 118 HOH C 303 SITE 1 AD6 3 HIS C 118 GLU C 122 HOH C 302 SITE 1 AD7 9 ARG A 314 SER A 319 HOH A 616 LYS B 401 SITE 2 AD7 9 GLY D 87 GLU D 88 GLU D 89 ASP D 90 SITE 3 AD7 9 HOH D 316 SITE 1 AD8 3 LYS B 401 ASP B 402 LYS D 85 SITE 1 AD9 7 SER B 346 SER D 11 ALA D 12 VAL D 13 SITE 2 AD9 7 HOH D 302 HOH D 322 HOH D 345 SITE 1 AE1 7 ALA D 53 ILE D 54 MET D 55 THR D 83 SITE 2 AE1 7 ALA D 84 LYS D 105 HOH D 349 SITE 1 AE2 5 MET D 103 ARG D 104 HOH D 301 HOH D 315 SITE 2 AE2 5 HOH D 319 SITE 1 AE3 3 HIS D 118 ASN D 121 GLU D 122 CRYST1 68.547 92.189 175.015 90.00 93.61 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014589 0.000000 0.000921 0.00000 SCALE2 0.000000 0.010847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005725 0.00000