data_6RIO # _entry.id 6RIO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6RIO pdb_00006rio 10.2210/pdb6rio/pdb WWPDB D_1292101996 ? ? BMRB 34397 ? 10.13018/BMR34397 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-12 2 'Structure model' 1 1 2019-07-10 3 'Structure model' 1 2 2020-03-04 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Source and taxonomy' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_database_proc 3 2 'Structure model' pdbx_seq_map_depositor_info 4 3 'Structure model' chem_comp 5 3 'Structure model' pdbx_entity_src_syn 6 3 'Structure model' pdbx_nmr_spectrometer 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 6 3 'Structure model' '_chem_comp.type' 7 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 8 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 9 3 'Structure model' '_pdbx_nmr_spectrometer.model' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6RIO _pdbx_database_status.recvd_initial_deposition_date 2019-04-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details ;Imidazole Polyamide-DNA complex NMR structure (5'-CGATGTACATCG-3') ; _pdbx_database_related.db_id 34397 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Padroni, G.' 1 0000-0002-1406-4449 'Withers, J.M.' 2 0000-0002-9746-9467 'Taladriz-Sender, A.' 3 0000-0002-8274-4761 'Reichenbach, L.F.' 4 0000-0002-9977-0659 'Parkinson, J.A.' 5 0000-0003-4270-6135 'Burley, G.A.' 6 0000-0002-4896-113X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 141 _citation.language ? _citation.page_first 9555 _citation.page_last 9563 _citation.title 'Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.8b12444 _citation.pdbx_database_id_PubMed 31117639 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Padroni, G.' 1 ? primary 'Withers, J.M.' 2 ? primary 'Taladriz-Sender, A.' 3 ? primary 'Reichenbach, L.F.' 4 ? primary 'Parkinson, J.A.' 5 ? primary 'Burley, G.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3') ; 3582.424 2 ? ? ? ? 2 non-polymer syn ;3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium ; 1239.350 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DCZ)(DG)(DA)(DT)(DG)(DT)(DA)(DC)(DA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can XGATGTACATCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name ;3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium ; _pdbx_entity_nonpoly.comp_id K4Z # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DCZ n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DT n 1 7 DA n 1 8 DC n 1 9 DA n 1 10 DT n 1 11 DC n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DCZ 'DNA OH 5 prime terminus' . "2'-DEOXYCYTIDINE" ? 'C9 H13 N3 O4' 227.217 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 K4Z non-polymer . ;3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium ; ? 'C58 H74 N22 O10 2' 1239.350 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DCZ 1 1 1 DCZ DC5 A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DA 9 9 9 DA DA A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG3 A . n B 1 1 DCZ 1 13 13 DCZ DC5 B . n B 1 2 DG 2 14 14 DG DG B . n B 1 3 DA 3 15 15 DA DA B . n B 1 4 DT 4 16 16 DT DT B . n B 1 5 DG 5 17 17 DG DG B . n B 1 6 DT 6 18 18 DT DT B . n B 1 7 DA 7 19 19 DA DA B . n B 1 8 DC 8 20 20 DC DC B . n B 1 9 DA 9 21 21 DA DA B . n B 1 10 DT 10 22 22 DT DT B . n B 1 11 DC 11 23 23 DC DC B . n B 1 12 DG 12 24 24 DG DG3 B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id K4Z _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 25 _pdbx_nonpoly_scheme.pdb_mon_id K4Z _pdbx_nonpoly_scheme.auth_mon_id PA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6RIO _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6RIO _struct.title ;Imidazole Polyamide-DNA complex NMR structure (5'-CGATGTACATCG-3') ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6RIO _struct_keywords.text 'Polyamide, DNA, Minor groove binder' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6RIO _struct_ref.pdbx_db_accession 6RIO _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6RIO A 1 ? 12 ? 6RIO 1 ? 12 ? 1 12 2 1 6RIO B 1 ? 12 ? 6RIO 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE 3 ? 1 'SSA (A^2)' 4380 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details NMR # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DCZ 1 "O3'" ? ? ? 1_555 A DG 2 P ? ? A DCZ 1 A DG 2 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale2 covale one ? B DCZ 1 "O3'" ? ? ? 1_555 B DG 2 P ? ? B DCZ 13 B DG 14 1_555 ? ? ? ? ? ? ? 1.614 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 3 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 3 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 4 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 4 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 6 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 6 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 7 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 7 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 9 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 9 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 10 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 10 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K4Z 101 ? 15 'binding site for residue K4Z A 101' AC2 Software B DCZ 13 ? 4 'binding site for Di-nucleotide DCZ B 13 and DG B 14' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 DT A 4 ? DT A 4 . ? 1_555 ? 2 AC1 15 DG A 5 ? DG A 5 . ? 1_555 ? 3 AC1 15 DT A 6 ? DT A 6 . ? 1_555 ? 4 AC1 15 DA A 7 ? DA A 7 . ? 1_555 ? 5 AC1 15 DC A 8 ? DC A 8 . ? 1_555 ? 6 AC1 15 DA A 9 ? DA A 9 . ? 1_555 ? 7 AC1 15 DT A 10 ? DT A 10 . ? 1_555 ? 8 AC1 15 DG B 5 ? DG B 17 . ? 1_555 ? 9 AC1 15 DT B 6 ? DT B 18 . ? 1_555 ? 10 AC1 15 DA B 7 ? DA B 19 . ? 1_555 ? 11 AC1 15 DC B 8 ? DC B 20 . ? 1_555 ? 12 AC1 15 DA B 9 ? DA B 21 . ? 1_555 ? 13 AC1 15 DT B 10 ? DT B 22 . ? 1_555 ? 14 AC1 15 DC B 11 ? DC B 23 . ? 1_555 ? 15 AC1 15 DG B 12 ? DG B 24 . ? 1_555 ? 16 AC2 4 DT A 10 ? DT A 10 . ? 1_555 ? 17 AC2 4 DC A 11 ? DC A 11 . ? 1_555 ? 18 AC2 4 DG A 12 ? DG A 12 . ? 1_555 ? 19 AC2 4 DA B 3 ? DA B 15 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.45 108.30 3.15 0.30 N 2 1 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.83 117.00 -3.17 0.50 N 3 1 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.16 117.70 3.46 0.50 N 4 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.14 118.60 -5.46 0.60 N 5 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.67 108.30 5.37 0.30 N 6 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.23 122.90 -3.67 0.60 N 7 1 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.73 117.00 -3.27 0.50 N 8 1 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.62 117.70 3.92 0.50 N 9 1 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.46 118.60 -4.14 0.60 N 10 1 "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? "O4'" A DC 8 ? ? 116.45 109.80 6.65 1.10 N 11 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 116.30 108.30 8.00 0.30 N 12 1 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 116.93 121.90 -4.97 0.70 N 13 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.46 108.30 2.16 0.30 N 14 1 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.55 117.00 -3.45 0.50 N 15 1 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.25 117.70 3.55 0.50 N 16 1 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.03 118.60 -5.57 0.60 N 17 1 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.19 122.90 -3.71 0.60 N 18 1 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.63 121.90 -5.27 0.70 N 19 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.05 108.30 3.75 0.30 N 20 1 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.82 117.00 -3.18 0.50 N 21 1 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.44 117.70 3.74 0.50 N 22 1 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.26 118.60 -4.34 0.60 N 23 1 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.00 108.30 2.70 0.30 N 24 1 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.61 122.30 -3.69 0.60 N 25 1 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.16 122.90 -3.74 0.60 N 26 1 "C3'" B DG 17 ? ? "O3'" B DG 17 ? ? P B DT 18 ? ? 127.00 119.70 7.30 1.20 Y 27 1 C4 B DA 19 ? ? C5 B DA 19 ? ? C6 B DA 19 ? ? 113.96 117.00 -3.04 0.50 N 28 1 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.63 117.70 3.93 0.50 N 29 1 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.46 118.60 -4.14 0.60 N 30 1 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 110.67 108.30 2.37 0.30 N 31 1 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.93 121.90 -4.97 0.70 N 32 1 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 111.17 108.30 2.87 0.30 N 33 1 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.73 117.00 -3.27 0.50 N 34 1 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.30 117.70 3.60 0.50 N 35 1 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.69 118.60 -4.91 0.60 N 36 1 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 112.77 108.30 4.47 0.30 N 37 1 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.18 122.90 -3.72 0.60 N 38 1 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 111.25 108.30 2.95 0.30 N 39 1 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 117.01 121.90 -4.89 0.70 N 40 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.86 108.30 4.56 0.30 N 41 2 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.75 117.00 -3.25 0.50 N 42 2 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.09 117.70 3.39 0.50 N 43 2 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.17 118.60 -5.43 0.60 N 44 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.90 108.30 4.60 0.30 N 45 2 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.68 122.30 -3.62 0.60 N 46 2 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.77 122.90 -4.13 0.60 N 47 2 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 97.39 102.40 -5.01 0.80 N 48 2 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.72 108.30 2.42 0.30 N 49 2 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.73 117.00 -3.27 0.50 N 50 2 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.49 117.70 3.79 0.50 N 51 2 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 113.86 118.60 -4.74 0.60 N 52 2 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 113.86 108.30 5.56 0.30 N 53 2 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.29 121.90 -4.61 0.70 N 54 2 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.43 108.30 2.13 0.30 N 55 2 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.46 117.00 -3.54 0.50 N 56 2 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.46 117.70 3.76 0.50 N 57 2 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.31 118.60 -5.29 0.60 N 58 2 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.03 122.90 -3.87 0.60 N 59 2 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.82 121.90 -5.08 0.70 N 60 2 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.49 108.30 3.19 0.30 N 61 2 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.51 117.70 3.81 0.50 N 62 2 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.12 118.60 -4.48 0.60 N 63 2 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.77 108.30 3.47 0.30 N 64 2 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.07 122.90 -3.83 0.60 N 65 2 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.72 117.70 4.02 0.50 N 66 2 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.36 118.60 -4.24 0.60 N 67 2 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 111.32 108.30 3.02 0.30 N 68 2 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.95 121.90 -4.95 0.70 N 69 2 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.99 117.00 -3.01 0.50 N 70 2 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.48 117.70 3.78 0.50 N 71 2 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 114.01 118.60 -4.59 0.60 N 72 2 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 118.92 122.90 -3.98 0.60 N 73 2 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.92 121.90 -4.98 0.70 N 74 2 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 113.17 108.30 4.87 0.30 N 75 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.24 108.30 3.94 0.30 N 76 3 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.86 117.00 -3.14 0.50 N 77 3 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.23 117.70 3.53 0.50 N 78 3 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.25 118.60 -5.35 0.60 N 79 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.43 108.30 5.13 0.30 N 80 3 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.26 122.90 -3.64 0.60 N 81 3 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.39 117.70 3.69 0.50 N 82 3 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.03 118.60 -4.57 0.60 N 83 3 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 114.89 108.30 6.59 0.30 N 84 3 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.24 121.90 -4.66 0.70 N 85 3 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.46 117.00 -3.54 0.50 N 86 3 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.20 117.70 3.50 0.50 N 87 3 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.09 118.60 -5.51 0.60 N 88 3 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.19 122.90 -3.71 0.60 N 89 3 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.62 121.90 -5.28 0.70 N 90 3 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.42 108.30 3.12 0.30 N 91 3 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.93 117.00 -3.07 0.50 N 92 3 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.49 117.70 3.79 0.50 N 93 3 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 113.92 118.60 -4.68 0.60 N 94 3 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 110.73 108.30 2.43 0.30 N 95 3 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.08 122.90 -3.82 0.60 N 96 3 "C3'" B DG 17 ? ? "O3'" B DG 17 ? ? P B DT 18 ? ? 127.47 119.70 7.77 1.20 Y 97 3 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 119.27 122.90 -3.63 0.60 N 98 3 C4 B DA 19 ? ? C5 B DA 19 ? ? C6 B DA 19 ? ? 113.95 117.00 -3.05 0.50 N 99 3 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.49 117.70 3.79 0.50 N 100 3 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 113.88 118.60 -4.72 0.60 N 101 3 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 111.72 108.30 3.42 0.30 N 102 3 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.64 121.90 -5.26 0.70 N 103 3 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.43 108.30 2.13 0.30 N 104 3 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.81 117.00 -3.19 0.50 N 105 3 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.43 117.70 3.73 0.50 N 106 3 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.98 118.60 -4.62 0.60 N 107 3 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 118.97 122.90 -3.93 0.60 N 108 3 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 110.88 108.30 2.58 0.30 N 109 3 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.72 118.90 3.82 0.60 N 110 3 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.46 121.90 -5.44 0.70 N 111 3 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.46 108.30 2.16 0.30 N 112 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.99 108.30 3.69 0.30 N 113 4 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.90 117.00 -3.10 0.50 N 114 4 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.06 117.70 3.36 0.50 N 115 4 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.47 118.60 -5.13 0.60 N 116 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.14 108.30 4.84 0.30 N 117 4 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.66 122.30 -3.64 0.60 N 118 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.09 122.90 -3.81 0.60 N 119 4 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.56 108.30 2.26 0.30 N 120 4 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.95 117.00 -3.05 0.50 N 121 4 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.47 117.70 3.77 0.50 N 122 4 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.47 118.60 -4.13 0.60 N 123 4 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 116.34 108.30 8.04 0.30 N 124 4 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.07 121.90 -4.83 0.70 N 125 4 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 113.34 108.30 5.04 0.30 N 126 4 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.71 117.00 -3.29 0.50 N 127 4 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.35 117.70 3.65 0.50 N 128 4 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 112.84 118.60 -5.76 0.60 N 129 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.08 108.30 3.78 0.30 N 130 4 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.62 121.90 -5.28 0.70 N 131 4 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.10 108.30 2.80 0.30 N 132 4 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.72 117.00 -3.28 0.50 N 133 4 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.15 117.70 3.45 0.50 N 134 4 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 113.61 118.60 -4.99 0.60 N 135 4 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.43 108.30 3.13 0.30 N 136 4 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.69 122.30 -3.61 0.60 N 137 4 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 118.86 122.90 -4.04 0.60 N 138 4 "C3'" B DG 17 ? ? "O3'" B DG 17 ? ? P B DT 18 ? ? 127.44 119.70 7.74 1.20 Y 139 4 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.61 117.70 3.91 0.50 N 140 4 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.12 118.60 -4.48 0.60 N 141 4 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 111.40 108.30 3.10 0.30 N 142 4 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.64 121.90 -5.26 0.70 N 143 4 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.15 108.30 1.85 0.30 N 144 4 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.64 117.00 -3.36 0.50 N 145 4 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.67 117.70 3.97 0.50 N 146 4 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.80 118.60 -4.80 0.60 N 147 4 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.03 122.90 -3.87 0.60 N 148 4 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 110.77 108.30 2.47 0.30 N 149 4 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.71 118.90 3.81 0.60 N 150 4 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.51 121.90 -5.39 0.70 N 151 4 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.53 108.30 2.23 0.30 N 152 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.76 108.30 4.46 0.30 N 153 5 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.86 117.00 -3.14 0.50 N 154 5 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 120.97 117.70 3.27 0.50 N 155 5 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.35 118.60 -5.25 0.60 N 156 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.92 108.30 4.62 0.30 N 157 5 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.29 122.90 -3.61 0.60 N 158 5 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.31 117.70 3.61 0.50 N 159 5 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.54 118.60 -4.06 0.60 N 160 5 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 113.90 108.30 5.60 0.30 N 161 5 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.42 121.90 -4.48 0.70 N 162 5 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.03 108.30 3.73 0.30 N 163 5 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.73 117.00 -3.27 0.50 N 164 5 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.24 117.70 3.54 0.50 N 165 5 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.03 118.60 -5.57 0.60 N 166 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.46 108.30 2.16 0.30 N 167 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.04 108.30 2.74 0.30 N 168 5 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.50 118.90 3.60 0.60 N 169 5 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.55 121.90 -5.35 0.70 N 170 5 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.24 108.30 1.94 0.30 N 171 5 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.76 117.00 -3.24 0.50 N 172 5 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.20 117.70 3.50 0.50 N 173 5 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 113.63 118.60 -4.97 0.60 N 174 5 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.30 108.30 3.00 0.30 N 175 5 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.57 122.30 -3.73 0.60 N 176 5 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 118.82 122.90 -4.08 0.60 N 177 5 "C3'" B DG 17 ? ? "O3'" B DG 17 ? ? P B DT 18 ? ? 127.06 119.70 7.36 1.20 Y 178 5 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 119.18 122.90 -3.72 0.60 N 179 5 C4 B DA 19 ? ? C5 B DA 19 ? ? C6 B DA 19 ? ? 113.96 117.00 -3.04 0.50 N 180 5 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.50 117.70 3.80 0.50 N 181 5 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.12 118.60 -4.48 0.60 N 182 5 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 110.92 108.30 2.62 0.30 N 183 5 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.71 121.90 -5.19 0.70 N 184 5 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.95 108.30 2.65 0.30 N 185 5 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.65 117.00 -3.35 0.50 N 186 5 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.45 117.70 3.75 0.50 N 187 5 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.60 118.60 -5.00 0.60 N 188 5 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 110.85 108.30 2.55 0.30 N 189 5 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.27 122.90 -3.63 0.60 N 190 5 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.97 121.90 -4.93 0.70 N 191 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.86 108.30 3.56 0.30 N 192 6 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.38 117.70 3.68 0.50 N 193 6 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.94 118.60 -5.66 0.60 N 194 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 100.79 105.90 -5.11 0.80 N 195 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.74 108.30 5.44 0.30 N 196 6 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.16 122.90 -3.74 0.60 N 197 6 N1 A DG 5 ? ? C6 A DG 5 ? ? O6 A DG 5 ? ? 116.16 119.90 -3.74 0.60 N 198 6 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.48 117.70 3.78 0.50 N 199 6 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.10 118.60 -4.50 0.60 N 200 6 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 113.56 108.30 5.26 0.30 N 201 6 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 116.89 121.90 -5.01 0.70 N 202 6 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.83 117.00 -3.17 0.50 N 203 6 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.21 117.70 3.51 0.50 N 204 6 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.28 118.60 -5.32 0.60 N 205 6 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.06 122.90 -3.84 0.60 N 206 6 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.61 121.90 -5.29 0.70 N 207 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.77 108.30 4.47 0.30 N 208 6 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.36 108.30 2.06 0.30 N 209 6 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.99 117.00 -3.01 0.50 N 210 6 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.44 117.70 3.74 0.50 N 211 6 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.03 118.60 -4.57 0.60 N 212 6 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.68 108.30 3.38 0.30 N 213 6 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.65 122.30 -3.65 0.60 N 214 6 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.11 122.90 -3.79 0.60 N 215 6 "C3'" B DG 17 ? ? "O3'" B DG 17 ? ? P B DT 18 ? ? 127.04 119.70 7.34 1.20 Y 216 6 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 119.22 122.90 -3.68 0.60 N 217 6 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.53 117.70 3.83 0.50 N 218 6 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.43 118.60 -4.17 0.60 N 219 6 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 110.50 108.30 2.20 0.30 N 220 6 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.74 121.90 -5.16 0.70 N 221 6 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.88 108.30 2.58 0.30 N 222 6 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.94 117.00 -3.06 0.50 N 223 6 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.51 117.70 3.81 0.50 N 224 6 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.80 118.60 -4.80 0.60 N 225 6 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 110.98 108.30 2.68 0.30 N 226 6 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.13 122.90 -3.77 0.60 N 227 6 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 110.71 108.30 2.41 0.30 N 228 6 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.76 121.90 -5.14 0.70 N 229 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.41 108.30 4.11 0.30 N 230 7 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.90 117.00 -3.10 0.50 N 231 7 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.22 117.70 3.52 0.50 N 232 7 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.21 118.60 -5.39 0.60 N 233 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.71 108.30 4.41 0.30 N 234 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.14 122.90 -3.76 0.60 N 235 7 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.95 108.30 2.65 0.30 N 236 7 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.81 117.00 -3.19 0.50 N 237 7 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.43 117.70 3.73 0.50 N 238 7 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 113.99 118.60 -4.61 0.60 N 239 7 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 113.96 108.30 5.66 0.30 N 240 7 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.21 121.90 -4.69 0.70 N 241 7 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.62 117.00 -3.38 0.50 N 242 7 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.24 117.70 3.54 0.50 N 243 7 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 112.66 118.60 -5.94 0.60 N 244 7 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.26 122.90 -3.64 0.60 N 245 7 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.65 121.90 -5.25 0.70 N 246 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.36 108.30 3.06 0.30 N 247 7 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.98 117.00 -3.02 0.50 N 248 7 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.29 117.70 3.59 0.50 N 249 7 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.25 118.60 -4.35 0.60 N 250 7 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 112.51 108.30 4.21 0.30 N 251 7 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.69 122.30 -3.61 0.60 N 252 7 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 118.91 122.90 -3.99 0.60 N 253 7 C4 B DA 19 ? ? C5 B DA 19 ? ? C6 B DA 19 ? ? 113.98 117.00 -3.02 0.50 N 254 7 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.66 117.70 3.96 0.50 N 255 7 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.34 118.60 -4.26 0.60 N 256 7 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 112.40 108.30 4.10 0.30 N 257 7 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 117.08 121.90 -4.82 0.70 N 258 7 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.16 108.30 1.86 0.30 N 259 7 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.65 117.70 3.95 0.50 N 260 7 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.75 118.60 -4.85 0.60 N 261 7 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 110.87 108.30 2.57 0.30 N 262 7 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 118.75 122.90 -4.15 0.60 N 263 7 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.58 121.90 -5.32 0.70 N 264 7 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 112.28 108.30 3.98 0.30 N 265 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.46 108.30 5.16 0.30 N 266 8 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.67 117.00 -3.33 0.50 N 267 8 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.10 117.70 3.40 0.50 N 268 8 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.04 118.60 -5.56 0.60 N 269 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.14 108.30 2.84 0.30 N 270 8 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.43 108.30 2.13 0.30 N 271 8 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.74 117.00 -3.26 0.50 N 272 8 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.54 117.70 3.84 0.50 N 273 8 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 113.85 118.60 -4.75 0.60 N 274 8 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 114.65 108.30 6.35 0.30 N 275 8 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.06 121.90 -4.84 0.70 N 276 8 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.33 108.30 3.03 0.30 N 277 8 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.67 117.00 -3.33 0.50 N 278 8 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.45 117.70 3.75 0.50 N 279 8 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.09 118.60 -5.51 0.60 N 280 8 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.08 122.90 -3.82 0.60 N 281 8 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.67 118.90 3.77 0.60 N 282 8 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.54 121.90 -5.36 0.70 N 283 8 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.78 108.30 2.48 0.30 N 284 8 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.86 117.00 -3.14 0.50 N 285 8 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.51 117.70 3.81 0.50 N 286 8 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 113.79 118.60 -4.81 0.60 N 287 8 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 112.69 108.30 4.39 0.30 N 288 8 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.56 122.30 -3.74 0.60 N 289 8 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.17 122.90 -3.73 0.60 N 290 8 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.89 122.90 -4.01 0.60 N 291 8 C4 B DA 19 ? ? C5 B DA 19 ? ? C6 B DA 19 ? ? 113.87 117.00 -3.13 0.50 N 292 8 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.67 117.70 3.97 0.50 N 293 8 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 113.95 118.60 -4.64 0.60 N 294 8 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 110.82 108.30 2.52 0.30 N 295 8 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 117.14 121.90 -4.76 0.70 N 296 8 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.37 108.30 2.07 0.30 N 297 8 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.68 117.00 -3.32 0.50 N 298 8 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.49 117.70 3.79 0.50 N 299 8 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.12 118.60 -5.48 0.60 N 300 8 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 111.57 108.30 3.27 0.30 N 301 8 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.14 122.90 -3.76 0.60 N 302 8 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.66 121.90 -5.24 0.70 N 303 8 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.81 108.30 2.51 0.30 N 304 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.84 108.30 4.54 0.30 N 305 9 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.96 117.00 -3.04 0.50 N 306 9 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.13 117.70 3.43 0.50 N 307 9 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.10 118.60 -5.50 0.60 N 308 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.82 108.30 4.52 0.30 N 309 9 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.28 122.90 -3.62 0.60 N 310 9 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 111.39 108.30 3.09 0.30 N 311 9 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.66 117.00 -3.34 0.50 N 312 9 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.52 117.70 3.82 0.50 N 313 9 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 113.94 118.60 -4.66 0.60 N 314 9 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 114.22 108.30 5.92 0.30 N 315 9 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.00 121.90 -4.90 0.70 N 316 9 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.60 117.00 -3.40 0.50 N 317 9 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.36 117.70 3.66 0.50 N 318 9 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 112.88 118.60 -5.72 0.60 N 319 9 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.75 121.90 -5.15 0.70 N 320 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.09 108.30 3.79 0.30 N 321 9 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.95 117.00 -3.05 0.50 N 322 9 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.09 117.70 3.39 0.50 N 323 9 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.11 118.60 -4.49 0.60 N 324 9 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 111.86 108.30 3.56 0.30 N 325 9 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.10 122.90 -3.80 0.60 N 326 9 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.15 108.30 1.85 0.30 N 327 9 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.45 117.70 3.75 0.50 N 328 9 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.42 118.60 -4.18 0.60 N 329 9 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 112.97 108.30 4.67 0.30 N 330 9 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 117.37 121.90 -4.53 0.70 N 331 9 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.92 117.00 -3.08 0.50 N 332 9 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.59 117.70 3.89 0.50 N 333 9 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.59 118.60 -5.01 0.60 N 334 9 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 118.25 122.90 -4.65 0.60 N 335 9 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.55 121.90 -5.35 0.70 N 336 9 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 113.37 108.30 5.07 0.30 N 337 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.74 108.30 3.44 0.30 N 338 10 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.81 117.00 -3.19 0.50 N 339 10 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.27 117.70 3.57 0.50 N 340 10 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.48 118.60 -5.12 0.60 N 341 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 100.67 105.90 -5.23 0.80 N 342 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.17 108.30 4.87 0.30 N 343 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.28 122.90 -3.62 0.60 N 344 10 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 111.07 108.30 2.77 0.30 N 345 10 C4 A DA 7 ? ? C5 A DA 7 ? ? C6 A DA 7 ? ? 113.62 117.00 -3.38 0.50 N 346 10 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 121.35 117.70 3.65 0.50 N 347 10 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 113.82 118.60 -4.78 0.60 N 348 10 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 114.03 108.30 5.73 0.30 N 349 10 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 117.34 121.90 -4.56 0.70 N 350 10 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 113.50 108.30 5.20 0.30 N 351 10 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.73 117.00 -3.27 0.50 N 352 10 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.53 117.70 3.83 0.50 N 353 10 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.60 118.60 -5.00 0.60 N 354 10 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.66 118.90 3.76 0.60 N 355 10 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.47 121.90 -5.43 0.70 N 356 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.50 108.30 2.20 0.30 N 357 10 C4 B DA 15 ? ? C5 B DA 15 ? ? C6 B DA 15 ? ? 113.89 117.00 -3.11 0.50 N 358 10 C5 B DA 15 ? ? C6 B DA 15 ? ? N1 B DA 15 ? ? 121.75 117.70 4.05 0.50 N 359 10 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 114.28 118.60 -4.32 0.60 N 360 10 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 110.91 108.30 2.61 0.30 N 361 10 N3 B DT 16 ? ? C2 B DT 16 ? ? O2 B DT 16 ? ? 118.65 122.30 -3.65 0.60 N 362 10 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.10 122.90 -3.80 0.60 N 363 10 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.84 108.30 2.54 0.30 N 364 10 C5 B DA 19 ? ? C6 B DA 19 ? ? N1 B DA 19 ? ? 121.53 117.70 3.83 0.50 N 365 10 N1 B DA 19 ? ? C6 B DA 19 ? ? N6 B DA 19 ? ? 114.13 118.60 -4.47 0.60 N 366 10 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 111.69 108.30 3.39 0.30 N 367 10 N3 B DC 20 ? ? C2 B DC 20 ? ? O2 B DC 20 ? ? 116.97 121.90 -4.93 0.70 N 368 10 C4 B DA 21 ? ? C5 B DA 21 ? ? C6 B DA 21 ? ? 113.83 117.00 -3.17 0.50 N 369 10 C5 B DA 21 ? ? C6 B DA 21 ? ? N1 B DA 21 ? ? 121.68 117.70 3.98 0.50 N 370 10 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 113.40 118.60 -5.20 0.60 N 371 10 "O4'" B DT 22 ? ? "C1'" B DT 22 ? ? N1 B DT 22 ? ? 111.47 108.30 3.17 0.30 N 372 10 C6 B DT 22 ? ? C5 B DT 22 ? ? C7 B DT 22 ? ? 119.10 122.90 -3.80 0.60 N 373 10 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 110.36 108.30 2.06 0.30 N 374 10 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.59 121.90 -5.31 0.70 N 375 10 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 112.45 108.30 4.15 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.075 'SIDE CHAIN' 2 1 DG A 5 ? ? 0.071 'SIDE CHAIN' 3 1 DT A 6 ? ? 0.109 'SIDE CHAIN' 4 1 DG B 14 ? ? 0.058 'SIDE CHAIN' 5 1 DG B 17 ? ? 0.099 'SIDE CHAIN' 6 1 DT B 18 ? ? 0.109 'SIDE CHAIN' 7 1 DA B 21 ? ? 0.058 'SIDE CHAIN' 8 1 DC B 23 ? ? 0.106 'SIDE CHAIN' 9 2 DG A 2 ? ? 0.065 'SIDE CHAIN' 10 2 DA A 3 ? ? 0.067 'SIDE CHAIN' 11 2 DG A 5 ? ? 0.061 'SIDE CHAIN' 12 2 DT A 6 ? ? 0.113 'SIDE CHAIN' 13 2 DA A 9 ? ? 0.051 'SIDE CHAIN' 14 2 DG B 14 ? ? 0.074 'SIDE CHAIN' 15 2 DG B 17 ? ? 0.088 'SIDE CHAIN' 16 2 DT B 18 ? ? 0.143 'SIDE CHAIN' 17 2 DG B 24 ? ? 0.055 'SIDE CHAIN' 18 3 DA A 3 ? ? 0.072 'SIDE CHAIN' 19 3 DG A 5 ? ? 0.068 'SIDE CHAIN' 20 3 DT A 6 ? ? 0.135 'SIDE CHAIN' 21 3 DA A 7 ? ? 0.051 'SIDE CHAIN' 22 3 DG B 17 ? ? 0.082 'SIDE CHAIN' 23 3 DT B 18 ? ? 0.111 'SIDE CHAIN' 24 4 DA A 3 ? ? 0.066 'SIDE CHAIN' 25 4 DG A 5 ? ? 0.058 'SIDE CHAIN' 26 4 DT A 6 ? ? 0.127 'SIDE CHAIN' 27 4 DA A 9 ? ? 0.057 'SIDE CHAIN' 28 4 DG B 14 ? ? 0.102 'SIDE CHAIN' 29 4 DA B 15 ? ? 0.057 'SIDE CHAIN' 30 4 DG B 17 ? ? 0.122 'SIDE CHAIN' 31 4 DT B 18 ? ? 0.104 'SIDE CHAIN' 32 5 DA A 3 ? ? 0.079 'SIDE CHAIN' 33 5 DG A 5 ? ? 0.054 'SIDE CHAIN' 34 5 DT A 6 ? ? 0.108 'SIDE CHAIN' 35 5 DA A 9 ? ? 0.053 'SIDE CHAIN' 36 5 DG B 14 ? ? 0.079 'SIDE CHAIN' 37 5 DG B 17 ? ? 0.063 'SIDE CHAIN' 38 5 DT B 18 ? ? 0.101 'SIDE CHAIN' 39 6 DG A 5 ? ? 0.070 'SIDE CHAIN' 40 6 DT A 6 ? ? 0.132 'SIDE CHAIN' 41 6 DA A 7 ? ? 0.059 'SIDE CHAIN' 42 6 DG B 17 ? ? 0.115 'SIDE CHAIN' 43 6 DT B 18 ? ? 0.103 'SIDE CHAIN' 44 7 DA A 3 ? ? 0.055 'SIDE CHAIN' 45 7 DT A 6 ? ? 0.107 'SIDE CHAIN' 46 7 DG B 14 ? ? 0.098 'SIDE CHAIN' 47 7 DT B 18 ? ? 0.121 'SIDE CHAIN' 48 8 DA A 3 ? ? 0.075 'SIDE CHAIN' 49 8 DT A 4 ? ? 0.105 'SIDE CHAIN' 50 8 DT A 6 ? ? 0.114 'SIDE CHAIN' 51 8 DG B 14 ? ? 0.067 'SIDE CHAIN' 52 8 DT B 18 ? ? 0.104 'SIDE CHAIN' 53 9 DT A 6 ? ? 0.121 'SIDE CHAIN' 54 9 DA A 7 ? ? 0.059 'SIDE CHAIN' 55 9 DG B 14 ? ? 0.071 'SIDE CHAIN' 56 9 DG B 17 ? ? 0.073 'SIDE CHAIN' 57 9 DT B 18 ? ? 0.113 'SIDE CHAIN' 58 10 DT A 6 ? ? 0.123 'SIDE CHAIN' 59 10 DA A 7 ? ? 0.063 'SIDE CHAIN' 60 10 DA A 9 ? ? 0.058 'SIDE CHAIN' 61 10 DG B 14 ? ? 0.072 'SIDE CHAIN' 62 10 DT B 18 ? ? 0.115 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 6RIO _pdbx_nmr_ensemble.conformers_calculated_total_number 2000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6RIO _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;1.3 mM DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3'), 1.3 mM Polyamide, 100 mM sodium phosphate, 90% H2O/10% D2O ; '90% H2O/10% D2O' H2O solution ? 2 ;1.3 mM DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3'), 1.3 mM Polyamide, 100 mM sodium phosphate, 100% D2O ; '100% D2O' D2O solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3') ; 1.3 ? mM 'natural abundance' 1 Polyamide 1.3 ? mM 'natural abundance' 1 'sodium phosphate' 100 ? mM 'natural abundance' 2 ;DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3') ; 1.3 ? mM 'natural abundance' 2 Polyamide 1.3 ? mM 'natural abundance' 2 'sodium phosphate' 100 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.45 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'Conditions 1' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '2D 1H-13C HSQC' 1 isotropic 2 1 2 '2D 1H-1H TOCSY' 1 isotropic 3 1 2 '2D DQF-COSY' 1 isotropic 4 1 2 '2D 1H-1H NOESY' 1 isotropic 5 1 2 '2D 1H-31P COSY' 1 isotropic 6 1 2 '1D 31P' 1 isotropic 7 1 1 '2D 1H-1H NOESY' 1 isotropic # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 6RIO 'molecular dynamics' ? 1 6RIO 'matrix relaxation' ? 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 3 'chemical shift assignment' Sparky ? Goddard 4 'structure calculation' MARDIGRAS ? 'N. Ulyanov' 5 collection TopSpin ? 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DCZ N1 N N N 71 DCZ C2 C N N 72 DCZ N3 N N N 73 DCZ C4 C N N 74 DCZ C5 C N N 75 DCZ C6 C N N 76 DCZ O2 O N N 77 DCZ N4 N N N 78 DCZ "C1'" C N R 79 DCZ "C2'" C N N 80 DCZ "C3'" C N S 81 DCZ "C4'" C N R 82 DCZ "O4'" O N N 83 DCZ "O3'" O N N 84 DCZ "C5'" C N N 85 DCZ "O5'" O N N 86 DCZ H5 H N N 87 DCZ H6 H N N 88 DCZ HN41 H N N 89 DCZ HN42 H N N 90 DCZ "H1'" H N N 91 DCZ "H2'1" H N N 92 DCZ "H2'2" H N N 93 DCZ "H3'" H N N 94 DCZ "H4'" H N N 95 DCZ "HO3'" H N N 96 DCZ "H5'1" H N N 97 DCZ "H5'2" H N N 98 DCZ HO51 H N N 99 DG OP3 O N N 100 DG P P N N 101 DG OP1 O N N 102 DG OP2 O N N 103 DG "O5'" O N N 104 DG "C5'" C N N 105 DG "C4'" C N R 106 DG "O4'" O N N 107 DG "C3'" C N S 108 DG "O3'" O N N 109 DG "C2'" C N N 110 DG "C1'" C N R 111 DG N9 N Y N 112 DG C8 C Y N 113 DG N7 N Y N 114 DG C5 C Y N 115 DG C6 C N N 116 DG O6 O N N 117 DG N1 N N N 118 DG C2 C N N 119 DG N2 N N N 120 DG N3 N N N 121 DG C4 C Y N 122 DG HOP3 H N N 123 DG HOP2 H N N 124 DG "H5'" H N N 125 DG "H5''" H N N 126 DG "H4'" H N N 127 DG "H3'" H N N 128 DG "HO3'" H N N 129 DG "H2'" H N N 130 DG "H2''" H N N 131 DG "H1'" H N N 132 DG H8 H N N 133 DG H1 H N N 134 DG H21 H N N 135 DG H22 H N N 136 DT OP3 O N N 137 DT P P N N 138 DT OP1 O N N 139 DT OP2 O N N 140 DT "O5'" O N N 141 DT "C5'" C N N 142 DT "C4'" C N R 143 DT "O4'" O N N 144 DT "C3'" C N S 145 DT "O3'" O N N 146 DT "C2'" C N N 147 DT "C1'" C N R 148 DT N1 N N N 149 DT C2 C N N 150 DT O2 O N N 151 DT N3 N N N 152 DT C4 C N N 153 DT O4 O N N 154 DT C5 C N N 155 DT C7 C N N 156 DT C6 C N N 157 DT HOP3 H N N 158 DT HOP2 H N N 159 DT "H5'" H N N 160 DT "H5''" H N N 161 DT "H4'" H N N 162 DT "H3'" H N N 163 DT "HO3'" H N N 164 DT "H2'" H N N 165 DT "H2''" H N N 166 DT "H1'" H N N 167 DT H3 H N N 168 DT H71 H N N 169 DT H72 H N N 170 DT H73 H N N 171 DT H6 H N N 172 K4Z C03 C N N 173 K4Z C04 C N N 174 K4Z C05 C N N 175 K4Z N02 N N N 176 K4Z N01 N N N 177 K4Z C01 C N N 178 K4Z C02 C N N 179 K4Z C11 C N N 180 K4Z N03 N N N 181 K4Z O11 O N N 182 K4Z C14 C Y N 183 K4Z N11 N Y N 184 K4Z O21 O N N 185 K4Z C13 C Y N 186 K4Z N12 N N N 187 K4Z O31 O N N 188 K4Z C15 C Y N 189 K4Z N21 N Y N 190 K4Z O41 O N N 191 K4Z CM1 C N N 192 K4Z N22 N N N 193 K4Z O91 O N N 194 K4Z C12 C Y N 195 K4Z N31 N Y N 196 K4Z O51 O N N 197 K4Z C21 C N N 198 K4Z O61 O N N 199 K4Z C24 C Y N 200 K4Z N32 N N N 201 K4Z O71 O N N 202 K4Z C25 C Y N 203 K4Z N41 N Y N 204 K4Z O81 O N N 205 K4Z CM2 C N N 206 K4Z N42 N Y N 207 K4Z C22 C Y N 208 K4Z N43 N N N 209 K4Z C23 C Y N 210 K4Z C31 C N N 211 K4Z N91 N N N 212 K4Z C34 C Y N 213 K4Z N51 N Y N 214 K4Z C35 C Y N 215 K4Z N52 N N N 216 K4Z CM3 C N N 217 K4Z N61 N Y N 218 K4Z C32 C Y N 219 K4Z N62 N N N 220 K4Z C41 C N N 221 K4Z N71 N Y N 222 K4Z C42 C Y N 223 K4Z C43 C Y N 224 K4Z N72 N N N 225 K4Z C44 C Y N 226 K4Z CM4 C N N 227 K4Z C91 C N N 228 K4Z C08 C N N 229 K4Z C51 C N N 230 K4Z C54 C Y N 231 K4Z C53 C Y N 232 K4Z C55 C Y N 233 K4Z CM5 C N N 234 K4Z C52 C Y N 235 K4Z C61 C N N 236 K4Z C63 C Y N 237 K4Z C64 C Y N 238 K4Z C65 C Y N 239 K4Z CM6 C N N 240 K4Z C62 C Y N 241 K4Z C71 C N N 242 K4Z C74 C Y N 243 K4Z C75 C Y N 244 K4Z CM7 C N N 245 K4Z C72 C Y N 246 K4Z C81 C N N 247 K4Z C92 C N R 248 K4Z C93 C N N 249 K4Z C94 C N N 250 K4Z C33 C Y N 251 K4Z C73 C Y N 252 K4Z C07 C N N 253 K4Z C06 C N N 254 K4Z O01 O N N 255 K4Z N1 N N N 256 K4Z C83 C Y N 257 K4Z N81 N Y N 258 K4Z C88 C N N 259 K4Z C82 C Y N 260 K4Z N82 N Y N 261 K4Z C84 C Y N 262 K4Z H032 H N N 263 K4Z H031 H N N 264 K4Z H041 H N N 265 K4Z H042 H N N 266 K4Z H051 H N N 267 K4Z H052 H N N 268 K4Z HN02 H N N 269 K4Z H006 H N N 270 K4Z H004 H N N 271 K4Z H005 H N N 272 K4Z H002 H N N 273 K4Z H003 H N N 274 K4Z H001 H N N 275 K4Z HN03 H N N 276 K4Z H13 H N N 277 K4Z HN1 H N N 278 K4Z H15 H N N 279 K4Z H113 H N N 280 K4Z H112 H N N 281 K4Z H111 H N N 282 K4Z HN2 H N N 283 K4Z HN3 H N N 284 K4Z H25 H N N 285 K4Z H223 H N N 286 K4Z H222 H N N 287 K4Z H221 H N N 288 K4Z HN4 H N N 289 K4Z H23 H N N 290 K4Z HN9 H N N 291 K4Z H35 H N N 292 K4Z HN5 H N N 293 K4Z H331 H N N 294 K4Z H333 H N N 295 K4Z H332 H N N 296 K4Z HN6 H N N 297 K4Z HN7 H N N 298 K4Z H44 H N N 299 K4Z H442 H N N 300 K4Z H441 H N N 301 K4Z H443 H N N 302 K4Z H082 H N N 303 K4Z H081 H N N 304 K4Z H53 H N N 305 K4Z H55 H N N 306 K4Z H551 H N N 307 K4Z H552 H N N 308 K4Z H553 H N N 309 K4Z H63 H N N 310 K4Z H65 H N N 311 K4Z H662 H N N 312 K4Z H663 H N N 313 K4Z H661 H N N 314 K4Z H75 H N N 315 K4Z H773 H N N 316 K4Z H772 H N N 317 K4Z H771 H N N 318 K4Z H922 H N N 319 K4Z H931 H N N 320 K4Z H932 H N N 321 K4Z H943 H N N 322 K4Z H942 H N N 323 K4Z H33 H N N 324 K4Z H73 H N N 325 K4Z H071 H N N 326 K4Z H072 H N N 327 K4Z H1 H N N 328 K4Z H3 H N N 329 K4Z H84 H N N 330 K4Z H881 H N N 331 K4Z H883 H N N 332 K4Z H882 H N N 333 K4Z H83 H N N 334 K4Z H2 H N N 335 K4Z HN01 H N N 336 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DCZ N1 C2 sing N N 74 DCZ N1 C6 sing N N 75 DCZ N1 "C1'" sing N N 76 DCZ C2 N3 sing N N 77 DCZ C2 O2 doub N N 78 DCZ N3 C4 doub N N 79 DCZ C4 C5 sing N N 80 DCZ C4 N4 sing N N 81 DCZ C5 C6 doub N N 82 DCZ C5 H5 sing N N 83 DCZ C6 H6 sing N N 84 DCZ N4 HN41 sing N N 85 DCZ N4 HN42 sing N N 86 DCZ "C1'" "C2'" sing N N 87 DCZ "C1'" "O4'" sing N N 88 DCZ "C1'" "H1'" sing N N 89 DCZ "C2'" "C3'" sing N N 90 DCZ "C2'" "H2'1" sing N N 91 DCZ "C2'" "H2'2" sing N N 92 DCZ "C3'" "C4'" sing N N 93 DCZ "C3'" "O3'" sing N N 94 DCZ "C3'" "H3'" sing N N 95 DCZ "C4'" "O4'" sing N N 96 DCZ "C4'" "C5'" sing N N 97 DCZ "C4'" "H4'" sing N N 98 DCZ "O3'" "HO3'" sing N N 99 DCZ "C5'" "O5'" sing N N 100 DCZ "C5'" "H5'1" sing N N 101 DCZ "C5'" "H5'2" sing N N 102 DCZ "O5'" HO51 sing N N 103 DG OP3 P sing N N 104 DG OP3 HOP3 sing N N 105 DG P OP1 doub N N 106 DG P OP2 sing N N 107 DG P "O5'" sing N N 108 DG OP2 HOP2 sing N N 109 DG "O5'" "C5'" sing N N 110 DG "C5'" "C4'" sing N N 111 DG "C5'" "H5'" sing N N 112 DG "C5'" "H5''" sing N N 113 DG "C4'" "O4'" sing N N 114 DG "C4'" "C3'" sing N N 115 DG "C4'" "H4'" sing N N 116 DG "O4'" "C1'" sing N N 117 DG "C3'" "O3'" sing N N 118 DG "C3'" "C2'" sing N N 119 DG "C3'" "H3'" sing N N 120 DG "O3'" "HO3'" sing N N 121 DG "C2'" "C1'" sing N N 122 DG "C2'" "H2'" sing N N 123 DG "C2'" "H2''" sing N N 124 DG "C1'" N9 sing N N 125 DG "C1'" "H1'" sing N N 126 DG N9 C8 sing Y N 127 DG N9 C4 sing Y N 128 DG C8 N7 doub Y N 129 DG C8 H8 sing N N 130 DG N7 C5 sing Y N 131 DG C5 C6 sing N N 132 DG C5 C4 doub Y N 133 DG C6 O6 doub N N 134 DG C6 N1 sing N N 135 DG N1 C2 sing N N 136 DG N1 H1 sing N N 137 DG C2 N2 sing N N 138 DG C2 N3 doub N N 139 DG N2 H21 sing N N 140 DG N2 H22 sing N N 141 DG N3 C4 sing N N 142 DT OP3 P sing N N 143 DT OP3 HOP3 sing N N 144 DT P OP1 doub N N 145 DT P OP2 sing N N 146 DT P "O5'" sing N N 147 DT OP2 HOP2 sing N N 148 DT "O5'" "C5'" sing N N 149 DT "C5'" "C4'" sing N N 150 DT "C5'" "H5'" sing N N 151 DT "C5'" "H5''" sing N N 152 DT "C4'" "O4'" sing N N 153 DT "C4'" "C3'" sing N N 154 DT "C4'" "H4'" sing N N 155 DT "O4'" "C1'" sing N N 156 DT "C3'" "O3'" sing N N 157 DT "C3'" "C2'" sing N N 158 DT "C3'" "H3'" sing N N 159 DT "O3'" "HO3'" sing N N 160 DT "C2'" "C1'" sing N N 161 DT "C2'" "H2'" sing N N 162 DT "C2'" "H2''" sing N N 163 DT "C1'" N1 sing N N 164 DT "C1'" "H1'" sing N N 165 DT N1 C2 sing N N 166 DT N1 C6 sing N N 167 DT C2 O2 doub N N 168 DT C2 N3 sing N N 169 DT N3 C4 sing N N 170 DT N3 H3 sing N N 171 DT C4 O4 doub N N 172 DT C4 C5 sing N N 173 DT C5 C7 sing N N 174 DT C5 C6 doub N N 175 DT C7 H71 sing N N 176 DT C7 H72 sing N N 177 DT C7 H73 sing N N 178 DT C6 H6 sing N N 179 K4Z CM6 N61 sing N N 180 K4Z CM3 N31 sing N N 181 K4Z O61 C61 doub N N 182 K4Z CM5 N51 sing N N 183 K4Z CM4 N41 sing N N 184 K4Z N61 C65 sing Y N 185 K4Z N61 C62 sing Y N 186 K4Z O41 C41 doub N N 187 K4Z C55 N51 sing Y N 188 K4Z C55 C54 doub Y N 189 K4Z C35 N31 sing Y N 190 K4Z C35 C34 doub Y N 191 K4Z N31 C32 sing Y N 192 K4Z N51 C52 sing Y N 193 K4Z C61 C62 sing N N 194 K4Z C61 N52 sing N N 195 K4Z C65 C64 doub Y N 196 K4Z C62 C63 doub Y N 197 K4Z O31 C31 doub N N 198 K4Z N41 C42 sing Y N 199 K4Z N41 C44 sing Y N 200 K4Z C41 C42 sing N N 201 K4Z C41 N32 sing N N 202 K4Z C54 N52 sing N N 203 K4Z C54 C53 sing Y N 204 K4Z C34 N32 sing N N 205 K4Z C34 C33 sing Y N 206 K4Z O71 C71 doub N N 207 K4Z C32 C31 sing N N 208 K4Z C32 C33 doub Y N 209 K4Z C52 C53 doub Y N 210 K4Z C52 C51 sing N N 211 K4Z C31 N22 sing N N 212 K4Z C42 N42 doub Y N 213 K4Z O51 C51 doub N N 214 K4Z C64 C63 sing Y N 215 K4Z C64 N62 sing N N 216 K4Z C44 C43 doub Y N 217 K4Z C51 N91 sing N N 218 K4Z CM7 N71 sing N N 219 K4Z C71 N62 sing N N 220 K4Z C71 C72 sing N N 221 K4Z C25 N21 sing Y N 222 K4Z C25 C24 doub Y N 223 K4Z CM2 N21 sing N N 224 K4Z N42 C43 sing Y N 225 K4Z C43 N43 sing N N 226 K4Z N22 C24 sing N N 227 K4Z N21 C22 sing Y N 228 K4Z O91 C91 doub N N 229 K4Z C24 C23 sing Y N 230 K4Z N71 C72 sing Y N 231 K4Z N71 C75 sing Y N 232 K4Z N91 C94 sing N N 233 K4Z C72 C73 doub Y N 234 K4Z N43 C91 sing N N 235 K4Z C91 C92 sing N N 236 K4Z C94 C93 sing N N 237 K4Z C22 C23 doub Y N 238 K4Z C22 C21 sing N N 239 K4Z C75 C74 doub Y N 240 K4Z C73 C74 sing Y N 241 K4Z O21 C21 doub N N 242 K4Z C92 C93 sing N N 243 K4Z C92 N1 sing N N 244 K4Z C21 N12 sing N N 245 K4Z C74 N72 sing N N 246 K4Z N12 C14 sing N N 247 K4Z N72 C81 sing N N 248 K4Z O81 C81 doub N N 249 K4Z C81 C82 sing N N 250 K4Z C14 C15 doub Y N 251 K4Z C14 C13 sing Y N 252 K4Z C15 N11 sing Y N 253 K4Z C82 N82 doub Y N 254 K4Z C82 N81 sing Y N 255 K4Z C13 C12 doub Y N 256 K4Z N11 CM1 sing N N 257 K4Z N11 C12 sing Y N 258 K4Z C88 N81 sing N N 259 K4Z N82 C84 sing Y N 260 K4Z N81 C83 sing Y N 261 K4Z C12 C11 sing N N 262 K4Z C84 C83 doub Y N 263 K4Z C11 N03 sing N N 264 K4Z C11 O11 doub N N 265 K4Z N03 C08 sing N N 266 K4Z C08 C07 sing N N 267 K4Z C07 C06 sing N N 268 K4Z C06 O01 doub N N 269 K4Z C06 N02 sing N N 270 K4Z N02 C05 sing N N 271 K4Z C05 C04 sing N N 272 K4Z C04 C03 sing N N 273 K4Z C03 N01 sing N N 274 K4Z C02 N01 sing N N 275 K4Z N01 C01 sing N N 276 K4Z C03 H032 sing N N 277 K4Z C03 H031 sing N N 278 K4Z C04 H041 sing N N 279 K4Z C04 H042 sing N N 280 K4Z C05 H051 sing N N 281 K4Z C05 H052 sing N N 282 K4Z N02 HN02 sing N N 283 K4Z C01 H006 sing N N 284 K4Z C01 H004 sing N N 285 K4Z C01 H005 sing N N 286 K4Z C02 H002 sing N N 287 K4Z C02 H003 sing N N 288 K4Z C02 H001 sing N N 289 K4Z N03 HN03 sing N N 290 K4Z C13 H13 sing N N 291 K4Z N12 HN1 sing N N 292 K4Z C15 H15 sing N N 293 K4Z CM1 H113 sing N N 294 K4Z CM1 H112 sing N N 295 K4Z CM1 H111 sing N N 296 K4Z N22 HN2 sing N N 297 K4Z N32 HN3 sing N N 298 K4Z C25 H25 sing N N 299 K4Z CM2 H223 sing N N 300 K4Z CM2 H222 sing N N 301 K4Z CM2 H221 sing N N 302 K4Z N43 HN4 sing N N 303 K4Z C23 H23 sing N N 304 K4Z N91 HN9 sing N N 305 K4Z C35 H35 sing N N 306 K4Z N52 HN5 sing N N 307 K4Z CM3 H331 sing N N 308 K4Z CM3 H333 sing N N 309 K4Z CM3 H332 sing N N 310 K4Z N62 HN6 sing N N 311 K4Z N72 HN7 sing N N 312 K4Z C44 H44 sing N N 313 K4Z CM4 H442 sing N N 314 K4Z CM4 H441 sing N N 315 K4Z CM4 H443 sing N N 316 K4Z C08 H082 sing N N 317 K4Z C08 H081 sing N N 318 K4Z C53 H53 sing N N 319 K4Z C55 H55 sing N N 320 K4Z CM5 H551 sing N N 321 K4Z CM5 H552 sing N N 322 K4Z CM5 H553 sing N N 323 K4Z C63 H63 sing N N 324 K4Z C65 H65 sing N N 325 K4Z CM6 H662 sing N N 326 K4Z CM6 H663 sing N N 327 K4Z CM6 H661 sing N N 328 K4Z C75 H75 sing N N 329 K4Z CM7 H773 sing N N 330 K4Z CM7 H772 sing N N 331 K4Z CM7 H771 sing N N 332 K4Z C92 H922 sing N N 333 K4Z C93 H931 sing N N 334 K4Z C93 H932 sing N N 335 K4Z C94 H943 sing N N 336 K4Z C94 H942 sing N N 337 K4Z C33 H33 sing N N 338 K4Z C73 H73 sing N N 339 K4Z C07 H071 sing N N 340 K4Z C07 H072 sing N N 341 K4Z N1 H3 sing N N 342 K4Z N1 H1 sing N N 343 K4Z C83 H84 sing N N 344 K4Z C88 H881 sing N N 345 K4Z C88 H883 sing N N 346 K4Z C88 H882 sing N N 347 K4Z C84 H83 sing N N 348 K4Z N1 H2 sing N N 349 K4Z N01 HN01 sing N N 350 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6RIO 'double helix' 6RIO 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 11 1_555 -1.194 0.232 0.998 46.410 26.977 18.837 1 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DA 3 1_555 B DT 10 1_555 -0.105 0.098 -0.261 15.133 -24.544 19.270 2 A_DA3:DT22_B A 3 ? B 22 ? 20 1 1 A DT 4 1_555 B DA 9 1_555 -0.481 0.031 -0.525 14.629 -24.017 -2.424 3 A_DT4:DA21_B A 4 ? B 21 ? 20 1 1 A DG 5 1_555 B DC 8 1_555 0.145 0.032 0.299 -2.008 -1.993 -0.395 4 A_DG5:DC20_B A 5 ? B 20 ? 19 1 1 A DT 6 1_555 B DA 7 1_555 -0.164 0.018 -0.017 10.655 -14.012 -6.470 5 A_DT6:DA19_B A 6 ? B 19 ? 20 1 1 A DA 7 1_555 B DT 6 1_555 0.048 -0.012 -0.115 3.294 -22.948 -5.161 6 A_DA7:DT18_B A 7 ? B 18 ? 20 1 1 A DC 8 1_555 B DG 5 1_555 -0.187 0.024 -0.034 5.103 -17.453 -1.300 7 A_DC8:DG17_B A 8 ? B 17 ? 19 1 1 A DA 9 1_555 B DT 4 1_555 0.495 0.055 -0.107 -6.913 -9.485 -0.100 8 A_DA9:DT16_B A 9 ? B 16 ? 20 1 1 A DT 10 1_555 B DA 3 1_555 -0.233 0.054 -0.150 7.037 -3.534 -4.179 9 A_DT10:DA15_B A 10 ? B 15 ? 20 1 1 A DC 11 1_555 B DG 2 1_555 0.653 -0.195 -0.247 2.487 -9.629 0.845 10 A_DC11:DG14_B A 11 ? B 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 11 1_555 A DA 3 1_555 B DT 10 1_555 -1.515 -0.331 4.508 9.025 -1.907 42.961 -0.202 3.171 4.134 -2.569 -12.156 43.895 1 AA_DG2DA3:DT22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DA 3 1_555 B DT 10 1_555 A DT 4 1_555 B DA 9 1_555 -1.127 -0.418 3.205 -3.282 4.983 24.372 -2.421 1.634 3.179 11.583 7.629 25.081 2 AA_DA3DT4:DA21DT22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DT 4 1_555 B DA 9 1_555 A DG 5 1_555 B DC 8 1_555 -1.334 -0.117 3.604 -13.935 18.569 36.867 -2.285 0.209 3.451 26.402 19.812 43.352 3 AA_DT4DG5:DC20DA21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DG 5 1_555 B DC 8 1_555 A DT 6 1_555 B DA 7 1_555 -1.147 -0.560 2.924 1.993 3.238 29.135 -1.712 2.636 2.764 6.403 -3.940 29.377 4 AA_DG5DT6:DA19DC20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DT 6 1_555 B DA 7 1_555 A DA 7 1_555 B DT 6 1_555 -0.191 0.356 3.337 0.498 10.937 31.933 -1.236 0.414 3.276 19.188 -0.874 33.711 5 AA_DT6DA7:DT18DA19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DA 7 1_555 B DT 6 1_555 A DC 8 1_555 B DG 5 1_555 0.735 -0.205 3.065 0.397 1.384 29.625 -0.673 -1.357 3.061 2.704 -0.777 29.659 6 AA_DA7DC8:DG17DT18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DC 8 1_555 B DG 5 1_555 A DA 9 1_555 B DT 4 1_555 1.798 0.430 3.540 10.170 13.401 40.054 -0.952 -1.272 3.818 18.603 -14.118 43.310 7 AA_DC8DA9:DT16DG17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DA 9 1_555 B DT 4 1_555 A DT 10 1_555 B DA 3 1_555 -0.202 -0.539 3.092 1.741 5.980 25.178 -2.730 0.896 2.868 13.458 -3.918 25.925 8 AA_DA9DT10:DA15DT16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DT 10 1_555 B DA 3 1_555 A DC 11 1_555 B DG 2 1_555 0.844 0.054 3.516 5.724 9.417 38.008 -1.136 -0.510 3.517 14.100 -8.571 39.517 9 AA_DT10DC11:DG14DA15_BB A 10 ? B 15 ? A 11 ? B 14 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Science and Technology Funding Council' 'United Kingdom' ST/M000125/1 1 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' BB/R006857/1 2 'Leverhulme Trust' 'United Kingdom' RPG-2018-149 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id K4Z _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id K4Z _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6RIO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_