HEADER TRANSFERASE 25-APR-19 6RIV TITLE CRYSTAL STRUCTURE OF ALOPECURUS MYOSUROIDES GSTF COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE; COMPND 3 CHAIN: B, A; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CYS122 WAS FOUND OXIDISED AND MODELLED AS CSO SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALOPECURUS MYOSUROIDES; SOURCE 3 ORGANISM_COMMON: SLENDER MEADOW FOXTAIL; SOURCE 4 ORGANISM_TAXID: 81473; SOURCE 5 GENE: GST2C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLUTATHIONE, DETOXIFICATION, XENOBIOTICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.C.PAPAGEORGIOU,N.POUDEL REVDAT 2 24-JAN-24 6RIV 1 REMARK LINK REVDAT 1 04-MAR-20 6RIV 0 JRNL AUTH N.GEORGAKIS,N.POUDEL,A.C.PAPAGEORGIOU,N.E.LABROU JRNL TITL COMPARATIVE STRUCTURAL AND FUNCTIONAL ANALYSIS OF PHI CLASS JRNL TITL 2 GLUTATHIONE TRANSFERASES INVOLVED IN MULTIPLE-HERBICIDE JRNL TITL 3 RESISTANCE OF GRASS WEEDS AND CROPS. JRNL REF PLANT PHYSIOL BIOCHEM. V. 149 266 2020 JRNL REFN ESSN 1873-2690 JRNL PMID 32088578 JRNL DOI 10.1016/J.PLAPHY.2020.02.012 REMARK 2 REMARK 2 RESOLUTION. 1.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 88547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.131 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 4463 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3170 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 45.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3486 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 438 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.23000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : 0.35000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.050 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3663 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3375 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4982 ; 1.541 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7839 ; 1.097 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 440 ; 5.471 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;30.171 ;23.827 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 591 ;11.602 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.132 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 546 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4014 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 748 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7038 ; 3.293 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 287 ;24.708 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7096 ; 9.694 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6RIV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-19. REMARK 100 THE DEPOSITION ID IS D_1292100590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93011 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.330 REMARK 200 RESOLUTION RANGE LOW (A) : 46.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 32.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: 1AW9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SPG, PH 5; 25% W/V PEG 1500, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 218 REMARK 465 ALA B 219 REMARK 465 LYS B 220 REMARK 465 GLY B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 LYS A 218 REMARK 465 ALA A 219 REMARK 465 LYS A 220 REMARK 465 GLY A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 705 O HOH A 778 2.00 REMARK 500 OD CSO B 120 O1 GOL B 503 2.16 REMARK 500 OD CSO A 120 O HOH A 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 93 O HOH A 777 1545 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 11 CG - SD - CE ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 67 108.55 71.37 REMARK 500 THR B 108 -57.82 -129.72 REMARK 500 LEU B 121 -62.48 -128.44 REMARK 500 MET B 126 -71.42 -88.96 REMARK 500 ASP B 163 32.99 -89.95 REMARK 500 MET B 214 56.05 -98.56 REMARK 500 ALA A 2 42.13 -106.25 REMARK 500 GLU A 67 106.83 75.13 REMARK 500 THR A 108 -57.49 -128.76 REMARK 500 LEU A 121 -62.99 -126.00 REMARK 500 ASP A 163 36.32 -91.17 REMARK 500 MET A 214 40.85 -100.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 841 DISTANCE = 6.17 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 89 OE2 REMARK 620 2 HOH B 638 O 133.7 REMARK 620 3 HOH B 679 O 112.6 88.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 650 O REMARK 620 2 HOH A 743 O 107.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 506 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 710 O REMARK 620 2 HOH B 786 O 74.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 683 O REMARK 620 2 HOH A 704 O 114.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 790 O REMARK 620 2 HOH A 840 O 109.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GS8 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SIN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GS8 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SIN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 505 DBREF 6RIV B 1 219 UNP Q9ZS17 Q9ZS17_ALOMY 1 219 DBREF 6RIV A 1 219 UNP Q9ZS17 Q9ZS17_ALOMY 1 219 SEQADV 6RIV LYS B 220 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV GLY B 221 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 222 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 223 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 224 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 225 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 226 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS B 227 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV LYS A 220 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV GLY A 221 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 222 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 223 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 224 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 225 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 226 UNP Q9ZS17 EXPRESSION TAG SEQADV 6RIV HIS A 227 UNP Q9ZS17 EXPRESSION TAG SEQRES 1 B 227 MET ALA PRO VAL LYS VAL PHE GLY PRO ALA MET SER THR SEQRES 2 B 227 ASN VAL ALA ARG VAL THR LEU CYS LEU GLU GLU VAL GLY SEQRES 3 B 227 ALA GLU TYR GLU VAL VAL ASN ILE ASP PHE ASN THR MET SEQRES 4 B 227 GLU HIS LYS SER PRO GLU HIS LEU ALA ARG ASN PRO PHE SEQRES 5 B 227 GLY GLN ILE PRO ALA PHE GLN ASP GLY ASP LEU LEU LEU SEQRES 6 B 227 TRP GLU SER ARG ALA ILE SER LYS TYR VAL LEU ARG LYS SEQRES 7 B 227 TYR LYS THR ASP GLU VAL ASP LEU LEU ARG GLU SER ASN SEQRES 8 B 227 LEU GLU GLU ALA ALA MET VAL ASP VAL TRP THR GLU VAL SEQRES 9 B 227 ASP ALA HIS THR TYR ASN PRO ALA LEU SER PRO ILE VAL SEQRES 10 B 227 TYR GLN CSO LEU PHE ASN PRO MET MET ARG GLY LEU PRO SEQRES 11 B 227 THR ASP GLU LYS VAL VAL ALA GLU SER LEU GLU LYS LEU SEQRES 12 B 227 LYS LYS VAL LEU GLU VAL TYR GLU ALA ARG LEU SER LYS SEQRES 13 B 227 HIS SER TYR LEU ALA GLY ASP PHE VAL SER PHE ALA ASP SEQRES 14 B 227 LEU ASN HIS PHE PRO TYR THR PHE TYR PHE MET ALA THR SEQRES 15 B 227 PRO HIS ALA ALA LEU PHE ASP SER TYR PRO HIS VAL LYS SEQRES 16 B 227 ALA TRP TRP ASP ARG LEU MET ALA ARG PRO ALA VAL LYS SEQRES 17 B 227 LYS ILE ALA ALA THR MET VAL PRO PRO LYS ALA LYS GLY SEQRES 18 B 227 HIS HIS HIS HIS HIS HIS SEQRES 1 A 227 MET ALA PRO VAL LYS VAL PHE GLY PRO ALA MET SER THR SEQRES 2 A 227 ASN VAL ALA ARG VAL THR LEU CYS LEU GLU GLU VAL GLY SEQRES 3 A 227 ALA GLU TYR GLU VAL VAL ASN ILE ASP PHE ASN THR MET SEQRES 4 A 227 GLU HIS LYS SER PRO GLU HIS LEU ALA ARG ASN PRO PHE SEQRES 5 A 227 GLY GLN ILE PRO ALA PHE GLN ASP GLY ASP LEU LEU LEU SEQRES 6 A 227 TRP GLU SER ARG ALA ILE SER LYS TYR VAL LEU ARG LYS SEQRES 7 A 227 TYR LYS THR ASP GLU VAL ASP LEU LEU ARG GLU SER ASN SEQRES 8 A 227 LEU GLU GLU ALA ALA MET VAL ASP VAL TRP THR GLU VAL SEQRES 9 A 227 ASP ALA HIS THR TYR ASN PRO ALA LEU SER PRO ILE VAL SEQRES 10 A 227 TYR GLN CSO LEU PHE ASN PRO MET MET ARG GLY LEU PRO SEQRES 11 A 227 THR ASP GLU LYS VAL VAL ALA GLU SER LEU GLU LYS LEU SEQRES 12 A 227 LYS LYS VAL LEU GLU VAL TYR GLU ALA ARG LEU SER LYS SEQRES 13 A 227 HIS SER TYR LEU ALA GLY ASP PHE VAL SER PHE ALA ASP SEQRES 14 A 227 LEU ASN HIS PHE PRO TYR THR PHE TYR PHE MET ALA THR SEQRES 15 A 227 PRO HIS ALA ALA LEU PHE ASP SER TYR PRO HIS VAL LYS SEQRES 16 A 227 ALA TRP TRP ASP ARG LEU MET ALA ARG PRO ALA VAL LYS SEQRES 17 A 227 LYS ILE ALA ALA THR MET VAL PRO PRO LYS ALA LYS GLY SEQRES 18 A 227 HIS HIS HIS HIS HIS HIS MODRES 6RIV CSO B 120 CYS MODIFIED RESIDUE MODRES 6RIV CSO A 120 CYS MODIFIED RESIDUE HET CSO B 120 7 HET CSO A 120 7 HET GS8 B 501 21 HET SIN B 502 8 HET GOL B 503 6 HET NA B 504 1 HET NA B 505 1 HET NA B 506 1 HET GS8 A 501 21 HET SIN A 502 8 HET NA A 503 1 HET NA A 504 1 HET NA A 505 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM GS8 S-HYDROXY-GLUTATHIONE HETNAM SIN SUCCINIC ACID HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 GS8 2(C10 H17 N3 O7 S) FORMUL 4 SIN 2(C4 H6 O4) FORMUL 5 GOL C3 H8 O3 FORMUL 6 NA 6(NA 1+) FORMUL 14 HOH *438(H2 O) HELIX 1 AA1 SER B 12 GLY B 26 1 15 HELIX 2 AA2 ASP B 35 LYS B 42 5 8 HELIX 3 AA3 SER B 43 ALA B 48 1 6 HELIX 4 AA4 GLU B 67 TYR B 79 1 13 HELIX 5 AA5 ASN B 91 THR B 108 1 18 HELIX 6 AA6 THR B 108 LEU B 121 1 14 HELIX 7 AA7 LEU B 121 MET B 126 1 6 HELIX 8 AA8 ASP B 132 HIS B 157 1 26 HELIX 9 AA9 SER B 166 MET B 180 1 15 HELIX 10 AB1 HIS B 184 SER B 190 5 7 HELIX 11 AB2 TYR B 191 ALA B 203 1 13 HELIX 12 AB3 ARG B 204 MET B 214 1 11 HELIX 13 AB4 SER A 12 GLY A 26 1 15 HELIX 14 AB5 ASP A 35 LYS A 42 5 8 HELIX 15 AB6 SER A 43 ALA A 48 1 6 HELIX 16 AB7 GLU A 67 TYR A 79 1 13 HELIX 17 AB8 ASN A 91 THR A 108 1 18 HELIX 18 AB9 THR A 108 LEU A 121 1 14 HELIX 19 AC1 LEU A 121 ARG A 127 1 7 HELIX 20 AC2 ASP A 132 HIS A 157 1 26 HELIX 21 AC3 SER A 166 HIS A 172 1 7 HELIX 22 AC4 HIS A 172 MET A 180 1 9 HELIX 23 AC5 HIS A 184 SER A 190 5 7 HELIX 24 AC6 TYR A 191 ALA A 203 1 13 HELIX 25 AC7 ARG A 204 MET A 214 1 11 SHEET 1 AA1 4 TYR B 29 VAL B 32 0 SHEET 2 AA1 4 VAL B 4 PHE B 7 1 N VAL B 6 O VAL B 32 SHEET 3 AA1 4 ALA B 57 ASP B 60 -1 O ALA B 57 N PHE B 7 SHEET 4 AA1 4 LEU B 63 TRP B 66 -1 O LEU B 65 N PHE B 58 SHEET 1 AA2 4 TYR A 29 VAL A 32 0 SHEET 2 AA2 4 VAL A 4 PHE A 7 1 N VAL A 6 O VAL A 32 SHEET 3 AA2 4 ALA A 57 ASP A 60 -1 O ALA A 57 N PHE A 7 SHEET 4 AA2 4 LEU A 63 TRP A 66 -1 O LEU A 65 N PHE A 58 LINK C GLN B 119 N CSO B 120 1555 1555 1.33 LINK C CSO B 120 N LEU B 121 1555 1555 1.34 LINK C GLN A 119 N CSO A 120 1555 1555 1.34 LINK C CSO A 120 N LEU A 121 1555 1555 1.34 LINK OE2 GLU B 89 NA NA B 505 1555 1555 2.65 LINK NA NA B 504 O HOH B 650 1555 1555 2.85 LINK NA NA B 504 O HOH A 743 1555 1445 2.68 LINK NA NA B 505 O HOH B 638 1555 1555 2.28 LINK NA NA B 505 O HOH B 679 1555 1555 2.89 LINK NA NA B 506 O HOH B 710 1555 1555 2.52 LINK NA NA B 506 O HOH B 786 1555 1555 2.84 LINK NA NA A 503 O HOH A 683 1555 1555 2.77 LINK NA NA A 503 O HOH A 704 1555 1555 2.73 LINK NA NA A 504 O HOH A 825 1555 1555 2.81 LINK NA NA A 505 O HOH A 790 1555 1555 2.80 LINK NA NA A 505 O HOH A 840 1555 1555 2.83 CISPEP 1 ILE B 55 PRO B 56 0 -1.91 CISPEP 2 ILE A 55 PRO A 56 0 0.92 SITE 1 AC1 15 ASN B 14 PHE B 36 HIS B 41 LYS B 42 SITE 2 AC1 15 GLN B 54 ILE B 55 PRO B 56 GLU B 67 SITE 3 AC1 15 SER B 68 TYR B 118 SIN B 502 HOH B 689 SITE 4 AC1 15 HOH B 692 HOH B 698 HOH B 746 SITE 1 AC2 11 SER B 12 THR B 13 TYR B 118 PHE B 122 SITE 2 AC2 11 MET B 126 GS8 B 501 HOH B 605 HOH B 607 SITE 3 AC2 11 HOH B 640 HOH B 647 HOH B 682 SITE 1 AC3 4 CSO B 120 GLU B 133 HOH B 684 HOH B 697 SITE 1 AC4 4 HOH A 743 VAL B 32 ASN B 33 HOH B 650 SITE 1 AC5 5 ARG A 77 ARG B 77 GLU B 89 HOH B 638 SITE 2 AC5 5 HOH B 679 SITE 1 AC6 4 ARG B 153 LYS B 156 HOH B 710 HOH B 786 SITE 1 AC7 19 ASN A 14 PHE A 36 LYS A 42 GLN A 54 SITE 2 AC7 19 ILE A 55 PRO A 56 GLU A 67 SER A 68 SITE 3 AC7 19 TYR A 118 SIN A 502 HOH A 631 HOH A 635 SITE 4 AC7 19 HOH A 668 HOH A 706 HOH A 713 HOH A 731 SITE 5 AC7 19 HOH A 749 HOH A 753 HIS B 107 SITE 1 AC8 11 SER A 12 THR A 13 TYR A 118 PHE A 122 SITE 2 AC8 11 MET A 126 GS8 A 501 HOH A 604 HOH A 622 SITE 3 AC8 11 HOH A 637 HOH A 685 HOH A 707 SITE 1 AC9 2 HOH A 683 HOH A 704 SITE 1 AD1 1 HOH A 825 SITE 1 AD2 2 HOH A 790 HOH A 840 CRYST1 50.289 50.708 51.603 97.74 110.24 110.96 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019885 0.007617 0.010024 0.00000 SCALE2 0.000000 0.021118 0.006520 0.00000 SCALE3 0.000000 0.000000 0.021616 0.00000