HEADER VIRUS 26-APR-19 6RJF TITLE ECHOVIRUS 1 INTACT PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: 1; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: VP2; COMPND 6 CHAIN: 2; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: VP3; COMPND 9 CHAIN: 3; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: VP4; COMPND 12 CHAIN: 4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ECHOVIRUS E1; SOURCE 3 ORGANISM_COMMON: E-1; SOURCE 4 ORGANISM_TAXID: 46633; SOURCE 5 STRAIN: HUMAN/EGYPT/FAROUK/1951; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ECHOVIRUS E1; SOURCE 8 ORGANISM_COMMON: E-1; SOURCE 9 ORGANISM_TAXID: 46633; SOURCE 10 MOL_ID: 3; SOURCE 11 ORGANISM_SCIENTIFIC: ECHOVIRUS E1; SOURCE 12 ORGANISM_COMMON: E-1; SOURCE 13 ORGANISM_TAXID: 46633; SOURCE 14 MOL_ID: 4; SOURCE 15 ORGANISM_SCIENTIFIC: ECHOVIRUS E1; SOURCE 16 ORGANISM_TAXID: 46633 KEYWDS VIRAL COAT PROTEIN, CAPSID, PICORNAVIRUS, ECHOVIRUS, ICOSAHEDRAL KEYWDS 2 VIRUS, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR A.DOMANSKA,V.P.RUOKOLAINEN,M.PELLICCIA,M.A.LAAJALA,V.S.MARJOMAKI, AUTHOR 2 S.J.BUTCHER REVDAT 4 22-MAY-24 6RJF 1 REMARK REVDAT 3 21-AUG-19 6RJF 1 JRNL REMARK REVDAT 2 26-JUN-19 6RJF 1 JRNL REVDAT 1 12-JUN-19 6RJF 0 JRNL AUTH V.RUOKOLAINEN,A.DOMANSKA,M.LAAJALA,M.PELLICCIA,S.J.BUTCHER, JRNL AUTH 2 V.MARJOMAKI JRNL TITL EXTRACELLULAR ALBUMIN AND ENDOSOMAL IONS PRIME ENTEROVIRUS JRNL TITL 2 PARTICLES FOR UNCOATING THAT CAN BE PREVENTED BY FATTY ACID JRNL TITL 3 SATURATION. JRNL REF J.VIROL. V. 93 2019 JRNL REFN ESSN 1098-5514 JRNL PMID 31189702 JRNL DOI 10.1128/JVI.00599-19 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.J.FILMAN,M.W.WIEN,J.A.CUNNINGHAM,J.M.BERGELSON,J.M.HOGLE REMARK 1 TITL STRUCTURE DETERMINATION OF ECHOVIRUS 1. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 54 1261 1998 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 10089503 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.H.JACOBSON,J.M.HOGLE,D.J.FILMAN REMARK 1 TITL A PSEUDO-CELL BASED APPROACH TO EFFICIENT CRYSTALLOGRAPHIC REMARK 1 TITL 2 REFINEMENT OF VIRUSES. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 52 693 1996 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15299633 REMARK 1 DOI 10.1107/S0907444996001060 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, GCTF, UCSF CHIMERA, COOT, REMARK 3 COOT, MDFF, RELION, RELION, RELION, REMARK 3 RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1EV1 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 45309 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6RJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-APR-19. REMARK 100 THE DEPOSITION ID IS D_1292100634. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ECHOVIRUS E1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 979 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 240-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -107.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4 REMARK 350 BIOMT1 1 -0.137850 0.759105 -0.636205 251.38800 REMARK 350 BIOMT2 1 -0.149036 0.619126 0.771020 -59.81570 REMARK 350 BIOMT3 1 0.979176 0.201102 0.027787 -51.70300 REMARK 350 BIOMT1 2 0.851655 -0.486456 0.195049 108.73900 REMARK 350 BIOMT2 2 -0.360259 -0.813660 -0.456258 652.26300 REMARK 350 BIOMT3 2 0.380653 0.318306 -0.868208 289.87100 REMARK 350 BIOMT1 3 -0.759105 -0.636205 0.137850 559.53100 REMARK 350 BIOMT2 3 -0.619126 0.771020 0.149036 173.34900 REMARK 350 BIOMT3 3 -0.201102 0.027787 -0.979176 533.71500 REMARK 350 BIOMT1 4 -0.092550 0.741802 0.664202 -78.05550 REMARK 350 BIOMT2 4 0.979386 0.188108 -0.073617 -23.30170 REMARK 350 BIOMT3 4 -0.179551 0.643696 -0.743920 317.28100 REMARK 350 BIOMT1 5 -0.441156 -0.177746 0.879652 183.01500 REMARK 350 BIOMT2 5 0.314762 0.887276 0.337143 -133.73700 REMARK 350 BIOMT3 5 -0.840420 0.425614 -0.335480 433.96800 REMARK 350 BIOMT1 6 0.348606 -0.027997 0.936851 -64.16920 REMARK 350 BIOMT2 6 0.664624 -0.697403 -0.268150 322.61000 REMARK 350 BIOMT3 6 0.660870 0.716132 -0.224512 -37.92040 REMARK 350 BIOMT1 7 0.092550 -0.741802 0.664202 243.97400 REMARK 350 BIOMT2 7 -0.979386 -0.188108 -0.073617 555.77500 REMARK 350 BIOMT3 7 0.179551 -0.643696 -0.743920 547.49800 REMARK 350 BIOMT1 8 0.936851 -0.348606 0.027997 94.85310 REMARK 350 BIOMT2 8 -0.268150 -0.664624 0.697403 306.35200 REMARK 350 BIOMT3 8 -0.224512 -0.660870 -0.716132 645.07300 REMARK 350 BIOMT1 9 -0.741802 -0.664202 -0.092550 619.32200 REMARK 350 BIOMT2 9 -0.188108 0.073617 0.979386 33.48570 REMARK 350 BIOMT3 9 -0.643696 0.743920 -0.179551 267.57000 REMARK 350 BIOMT1 10 -0.195049 0.851655 0.486456 -35.79840 REMARK 350 BIOMT2 10 0.456258 -0.360259 0.813660 22.38440 REMARK 350 BIOMT3 10 0.868208 0.380653 -0.318306 17.11980 REMARK 350 BIOMT1 11 -0.636205 -0.137850 0.759105 251.38800 REMARK 350 BIOMT2 11 0.771020 -0.149036 0.619126 -59.81570 REMARK 350 BIOMT3 11 0.027787 0.979176 0.201102 -51.70300 REMARK 350 BIOMT1 12 0.441156 0.177746 0.879652 -123.96000 REMARK 350 BIOMT2 12 -0.314762 -0.887276 0.337143 462.47400 REMARK 350 BIOMT3 12 0.840420 -0.425614 -0.335480 228.22400 REMARK 350 BIOMT1 13 0.195049 -0.851655 0.486456 289.87800 REMARK 350 BIOMT2 13 -0.456258 0.360259 0.813660 69.99970 REMARK 350 BIOMT3 13 -0.868208 -0.380653 -0.318306 636.55500 REMARK 350 BIOMT1 14 0.879652 -0.441156 -0.177746 183.01500 REMARK 350 BIOMT2 14 0.337143 0.314762 0.887276 -133.73700 REMARK 350 BIOMT3 14 -0.335480 -0.840420 0.425614 433.96800 REMARK 350 BIOMT1 15 -0.851655 -0.486456 -0.195049 627.90500 REMARK 350 BIOMT2 15 0.360259 -0.813660 0.456258 247.27100 REMARK 350 BIOMT3 15 -0.380653 0.318306 0.868208 48.04360 REMARK 350 BIOMT1 16 -0.027997 0.936851 0.348606 -64.16920 REMARK 350 BIOMT2 16 -0.697403 -0.268150 0.664624 322.61000 REMARK 350 BIOMT3 16 0.716132 -0.224512 0.660870 -37.92040 REMARK 350 BIOMT1 17 -0.664202 0.092550 0.741802 205.48400 REMARK 350 BIOMT2 17 0.073617 -0.979386 0.188108 425.96000 REMARK 350 BIOMT3 17 0.743920 0.179551 0.643696 -140.76000 REMARK 350 BIOMT1 18 0.636205 0.137850 0.759105 -132.54300 REMARK 350 BIOMT2 18 -0.771020 0.149036 0.619126 248.68800 REMARK 350 BIOMT3 18 -0.027787 -0.979176 0.201102 447.75100 REMARK 350 BIOMT1 19 0.027997 -0.936851 0.348606 386.62300 REMARK 350 BIOMT2 19 0.697403 0.268150 0.664624 -156.30400 REMARK 350 BIOMT3 19 -0.716132 0.224512 0.660870 205.92400 REMARK 350 BIOMT1 20 0.759105 -0.636205 -0.137850 251.38800 REMARK 350 BIOMT2 20 0.619126 0.771020 -0.149036 -59.81570 REMARK 350 BIOMT3 20 0.201102 0.027787 0.979176 -51.70300 REMARK 350 BIOMT1 21 -0.936851 -0.348606 -0.027997 573.41800 REMARK 350 BIOMT2 21 0.268150 -0.664624 -0.697403 519.26100 REMARK 350 BIOMT3 21 0.224512 -0.660870 0.716132 178.51300 REMARK 350 BIOMT1 22 0.177746 0.879652 0.441156 -123.96000 REMARK 350 BIOMT2 22 -0.887276 0.337143 -0.314762 462.47400 REMARK 350 BIOMT3 22 -0.425614 -0.335480 0.840420 228.22400 REMARK 350 BIOMT1 23 -0.486456 0.195049 0.851655 108.73900 REMARK 350 BIOMT2 23 -0.813660 -0.456258 -0.360259 652.26300 REMARK 350 BIOMT3 23 0.318306 -0.868208 0.380653 289.87100 REMARK 350 BIOMT1 24 0.664202 -0.092550 0.741802 -78.05550 REMARK 350 BIOMT2 24 -0.073617 0.979386 0.188108 -23.30170 REMARK 350 BIOMT3 24 -0.743920 -0.179551 0.643696 317.28100 REMARK 350 BIOMT1 25 -0.177746 -0.879652 0.441156 400.50900 REMARK 350 BIOMT2 25 0.887276 -0.337143 -0.314762 189.60700 REMARK 350 BIOMT3 25 0.425614 0.335480 0.840420 -149.27800 REMARK 350 BIOMT1 26 0.741802 -0.664202 0.092550 205.48400 REMARK 350 BIOMT2 26 0.188108 0.073617 -0.979386 425.96000 REMARK 350 BIOMT3 26 0.643696 0.743920 0.179551 -140.76000 REMARK 350 BIOMT1 27 -0.879652 -0.441156 0.177746 531.16000 REMARK 350 BIOMT2 27 -0.337143 0.314762 -0.887276 473.57500 REMARK 350 BIOMT3 27 0.335480 -0.840420 -0.425614 478.67500 REMARK 350 BIOMT1 28 0.137850 0.759105 0.636205 -132.54300 REMARK 350 BIOMT2 28 0.149036 0.619126 -0.771020 248.68800 REMARK 350 BIOMT3 28 -0.979176 0.201102 -0.027787 447.75100 REMARK 350 BIOMT1 29 -0.348606 0.027997 0.936851 94.85310 REMARK 350 BIOMT2 29 -0.664624 0.697403 -0.268150 306.35200 REMARK 350 BIOMT3 29 -0.660870 -0.716132 -0.224512 645.07300 REMARK 350 BIOMT1 30 0.486456 -0.195049 0.851655 -35.79840 REMARK 350 BIOMT2 30 0.813660 0.456258 -0.360259 22.38440 REMARK 350 BIOMT3 30 -0.318306 0.868208 0.380653 17.11980 REMARK 350 BIOMT1 31 -0.137850 -0.759105 0.636205 312.34700 REMARK 350 BIOMT2 31 -0.149036 -0.619126 -0.771020 629.69700 REMARK 350 BIOMT3 31 0.979176 -0.201102 -0.027787 61.82620 REMARK 350 BIOMT1 32 -0.936851 0.348606 0.027997 386.62300 REMARK 350 BIOMT2 32 0.268150 0.664624 0.697403 -156.30400 REMARK 350 BIOMT3 32 0.224512 0.660870 -0.716132 205.92400 REMARK 350 BIOMT1 33 0.759105 0.636205 0.137850 -132.54300 REMARK 350 BIOMT2 33 0.619126 -0.771020 0.149036 248.68800 REMARK 350 BIOMT3 33 0.201102 -0.027787 -0.979176 447.75100 REMARK 350 BIOMT1 34 0.177746 -0.879652 -0.441156 531.16000 REMARK 350 BIOMT2 34 -0.887276 -0.337143 0.314762 473.57500 REMARK 350 BIOMT3 34 -0.425614 0.335480 -0.840420 478.67500 REMARK 350 BIOMT1 35 0.664202 0.092550 -0.741802 243.97400 REMARK 350 BIOMT2 35 -0.073617 -0.979386 -0.188108 555.77500 REMARK 350 BIOMT3 35 -0.743920 0.179551 -0.643696 547.49800 REMARK 350 BIOMT1 36 -0.486456 -0.195049 -0.851655 627.90500 REMARK 350 BIOMT2 36 -0.813660 0.456258 0.360259 247.27100 REMARK 350 BIOMT3 36 0.318306 0.868208 -0.380653 48.04360 REMARK 350 BIOMT1 37 -0.177746 0.879652 -0.441156 183.01500 REMARK 350 BIOMT2 37 0.887276 0.337143 0.314762 -133.73700 REMARK 350 BIOMT3 37 0.425614 -0.335480 -0.840420 433.96800 REMARK 350 BIOMT1 38 -0.851655 0.486456 0.195049 289.87800 REMARK 350 BIOMT2 38 0.360259 0.813660 -0.456258 69.99970 REMARK 350 BIOMT3 38 -0.380653 -0.318306 -0.868208 636.55500 REMARK 350 BIOMT1 39 0.879652 0.441156 0.177746 -123.96000 REMARK 350 BIOMT2 39 0.337143 -0.314762 -0.887276 462.47400 REMARK 350 BIOMT3 39 -0.335480 0.840420 -0.425614 228.22400 REMARK 350 BIOMT1 40 -0.027997 -0.936851 -0.348606 573.41800 REMARK 350 BIOMT2 40 -0.697403 0.268150 -0.664624 519.26100 REMARK 350 BIOMT3 40 0.716132 0.224512 -0.660870 178.51300 REMARK 350 BIOMT1 41 0.636205 -0.137850 -0.759105 312.34700 REMARK 350 BIOMT2 41 -0.771020 -0.149036 -0.619126 629.69700 REMARK 350 BIOMT3 41 -0.027787 0.979176 -0.201102 61.82620 REMARK 350 BIOMT1 42 -0.664202 -0.092550 -0.741802 619.32200 REMARK 350 BIOMT2 42 0.073617 0.979386 -0.188108 33.48570 REMARK 350 BIOMT3 42 0.743920 -0.179551 -0.643696 267.57000 REMARK 350 BIOMT1 43 0.027997 0.936851 -0.348606 94.85310 REMARK 350 BIOMT2 43 0.697403 -0.268150 -0.664624 306.35200 REMARK 350 BIOMT3 43 -0.716132 -0.224512 -0.660870 645.07300 REMARK 350 BIOMT1 44 -0.741802 0.664202 0.092550 243.97400 REMARK 350 BIOMT2 44 -0.188108 -0.073617 -0.979386 555.77500 REMARK 350 BIOMT3 44 -0.643696 -0.743920 0.179551 547.49800 REMARK 350 BIOMT1 45 0.936851 0.348606 -0.027997 -64.16920 REMARK 350 BIOMT2 45 -0.268150 0.664624 -0.697403 322.61000 REMARK 350 BIOMT3 45 -0.224512 0.660870 0.716132 -37.92040 REMARK 350 BIOMT1 46 -0.195049 -0.851655 -0.486456 627.90500 REMARK 350 BIOMT2 46 0.456258 0.360259 -0.813660 247.27100 REMARK 350 BIOMT3 46 0.868208 -0.380653 0.318306 48.04360 REMARK 350 BIOMT1 47 0.441156 -0.177746 -0.879652 400.50900 REMARK 350 BIOMT2 47 -0.314762 0.887276 -0.337143 189.60700 REMARK 350 BIOMT3 47 0.840420 0.425614 0.335480 -149.27800 REMARK 350 BIOMT1 48 -0.636205 0.137850 -0.759105 559.53100 REMARK 350 BIOMT2 48 0.771020 0.149036 -0.619126 173.34900 REMARK 350 BIOMT3 48 0.027787 -0.979176 -0.201102 533.71500 REMARK 350 BIOMT1 49 0.195049 0.851655 -0.486456 108.73900 REMARK 350 BIOMT2 49 -0.456258 -0.360259 -0.813660 652.26300 REMARK 350 BIOMT3 49 -0.868208 0.380653 0.318306 289.87100 REMARK 350 BIOMT1 50 -0.759105 0.636205 -0.137850 312.34700 REMARK 350 BIOMT2 50 -0.619126 -0.771020 -0.149036 629.69700 REMARK 350 BIOMT3 50 -0.201102 -0.027787 0.979176 61.82620 REMARK 350 BIOMT1 51 0.851655 0.486456 -0.195049 -35.79840 REMARK 350 BIOMT2 51 -0.360259 0.813660 0.456258 22.38440 REMARK 350 BIOMT3 51 0.380653 -0.318306 0.868208 17.11980 REMARK 350 BIOMT1 52 -0.092550 -0.741802 -0.664202 619.32200 REMARK 350 BIOMT2 52 0.979386 -0.188108 0.073617 33.48570 REMARK 350 BIOMT3 52 -0.179551 -0.643696 0.743920 267.57000 REMARK 350 BIOMT1 53 0.348606 0.027997 -0.936851 386.62300 REMARK 350 BIOMT2 53 0.664624 0.697403 0.268150 -156.30400 REMARK 350 BIOMT3 53 0.660870 -0.716132 0.224512 205.92400 REMARK 350 BIOMT1 54 -0.441156 0.177746 -0.879652 531.16000 REMARK 350 BIOMT2 54 0.314762 -0.887276 -0.337143 473.57500 REMARK 350 BIOMT3 54 -0.840420 -0.425614 0.335480 478.67500 REMARK 350 BIOMT1 55 0.092550 0.741802 -0.664202 205.48400 REMARK 350 BIOMT2 55 -0.979386 0.188108 0.073617 425.96000 REMARK 350 BIOMT3 55 0.179551 0.643696 0.743920 -140.76000 REMARK 350 BIOMT1 56 -0.879652 0.441156 -0.177746 400.50900 REMARK 350 BIOMT2 56 -0.337143 -0.314762 0.887276 189.60700 REMARK 350 BIOMT3 56 0.335480 0.840420 0.425614 -149.27800 REMARK 350 BIOMT1 57 0.741802 0.664202 -0.092550 -78.05550 REMARK 350 BIOMT2 57 0.188108 -0.073617 0.979386 -23.30170 REMARK 350 BIOMT3 57 0.643696 -0.743920 -0.179551 317.28100 REMARK 350 BIOMT1 58 0.137850 -0.759105 -0.636205 559.53100 REMARK 350 BIOMT2 58 0.149036 -0.619126 0.771020 173.34900 REMARK 350 BIOMT3 58 -0.979176 -0.201102 0.027787 533.71500 REMARK 350 BIOMT1 59 0.486456 0.195049 -0.851655 289.87800 REMARK 350 BIOMT2 59 0.813660 -0.456258 0.360259 69.99970 REMARK 350 BIOMT3 59 -0.318306 -0.868208 -0.380653 636.55500 REMARK 350 BIOMT1 60 -0.348606 -0.027997 -0.936851 573.41800 REMARK 350 BIOMT2 60 -0.664624 -0.697403 0.268150 519.26100 REMARK 350 BIOMT3 60 -0.660870 0.716132 0.224512 178.51300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 THR 2 3 REMARK 465 VAL 2 4 REMARK 465 GLU 2 5 REMARK 465 GLU 2 6 REMARK 465 SER 4 16 REMARK 465 LEU 4 17 REMARK 465 SER 4 18 REMARK 465 ALA 4 19 REMARK 465 THR 4 20 REMARK 465 GLY 4 21 REMARK 465 ASN 4 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE2 MET 1 181 CE PLM 1 301 1.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN 1 24 56.93 -154.11 REMARK 500 SER 1 60 -7.36 -159.05 REMARK 500 PHE 1 75 148.82 -177.14 REMARK 500 THR 1 83 -169.66 -121.21 REMARK 500 ASN 1 88 7.31 -172.33 REMARK 500 SER 1 132 69.66 -105.90 REMARK 500 PRO 1 184 -179.11 -63.57 REMARK 500 ILE 1 186 11.28 -146.72 REMARK 500 GLN 1 204 42.90 70.47 REMARK 500 ASN 1 215 112.93 178.53 REMARK 500 MET 1 216 11.09 -145.94 REMARK 500 VAL 1 249 93.23 56.70 REMARK 500 ASN 2 30 -157.24 45.35 REMARK 500 ASP 2 57 -119.45 39.66 REMARK 500 ARG 2 62 156.44 166.00 REMARK 500 ALA 2 168 36.67 -144.56 REMARK 500 ALA 2 173 9.05 57.70 REMARK 500 MET 2 175 15.96 -164.78 REMARK 500 ARG 2 193 -33.16 156.74 REMARK 500 THR 2 194 -92.85 -104.41 REMARK 500 ASN 2 196 21.90 -147.12 REMARK 500 PRO 2 225 99.99 -66.81 REMARK 500 ALA 2 233 130.97 -28.77 REMARK 500 SER 2 236 149.09 75.61 REMARK 500 LEU 3 2 119.66 -29.64 REMARK 500 THR 3 4 131.00 133.57 REMARK 500 ASP 3 18 101.56 -164.50 REMARK 500 MET 3 34 -166.75 -126.02 REMARK 500 HIS 3 35 -89.64 -82.95 REMARK 500 ILE 3 36 104.00 83.96 REMARK 500 ARG 3 41 21.84 -150.52 REMARK 500 ASN 3 42 118.50 179.40 REMARK 500 ASN 3 57 24.52 -171.48 REMARK 500 SER 3 64 48.68 -101.49 REMARK 500 ASN 3 89 75.57 -179.04 REMARK 500 ALA 3 92 -5.32 -167.85 REMARK 500 ASN 3 106 0.08 -69.33 REMARK 500 CYS 3 122 41.50 -107.58 REMARK 500 PRO 3 137 158.44 -49.33 REMARK 500 ALA 3 140 9.36 -164.07 REMARK 500 THR 3 197 -85.47 -124.41 REMARK 500 SER 3 198 163.34 177.72 REMARK 500 ALA 3 203 -82.96 -35.39 REMARK 500 MET 3 225 78.91 54.63 REMARK 500 ASP 4 45 110.89 158.85 REMARK 500 ASP 4 49 88.06 -163.11 REMARK 500 PRO 4 56 54.31 -95.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO 3 3 THR 3 4 -40.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EV1 RELATED DB: PDB REMARK 900 RELATED ID: EMD-4903 RELATED DB: EMDB REMARK 900 ECHOVIRUS 1 INTACT PARTICLE DBREF 6RJF 1 1 281 UNP O91734 POLG_EC01F 570 850 DBREF 6RJF 2 1 261 UNP O91734 POLG_EC01F 70 330 DBREF 6RJF 3 1 239 UNP O91734 POLG_EC01F 331 569 DBREF 6RJF 4 2 69 PDB 6RJF 6RJF 2 69 SEQRES 1 1 281 GLY ASP VAL GLN ASN ALA VAL GLU GLY ALA MET VAL ARG SEQRES 2 1 281 VAL ALA ASP THR VAL GLN THR SER ALA THR ASN SER GLU SEQRES 3 1 281 ARG VAL PRO ASN LEU THR ALA VAL GLU THR GLY HIS THR SEQRES 4 1 281 SER GLN ALA VAL PRO GLY ASP THR MET GLN THR ARG HIS SEQRES 5 1 281 VAL ILE ASN ASN HIS VAL ARG SER GLU SER THR ILE GLU SEQRES 6 1 281 ASN PHE LEU ALA ARG SER ALA CYS VAL PHE TYR LEU GLU SEQRES 7 1 281 TYR LYS THR GLY THR LYS GLU ASP SER ASN SER PHE ASN SEQRES 8 1 281 ASN TRP VAL ILE THR THR ARG ARG VAL ALA GLN LEU ARG SEQRES 9 1 281 ARG LYS LEU GLU MET PHE THR TYR LEU ARG PHE ASP MET SEQRES 10 1 281 GLU ILE THR VAL VAL ILE THR SER SER GLN ASP GLN SER SEQRES 11 1 281 THR SER GLN ASN GLN ASN ALA PRO VAL LEU THR HIS GLN SEQRES 12 1 281 ILE MET TYR VAL PRO PRO GLY GLY PRO ILE PRO VAL SER SEQRES 13 1 281 VAL ASP ASP TYR SER TRP GLN THR SER THR ASN PRO SER SEQRES 14 1 281 ILE PHE TRP THR GLU GLY ASN ALA PRO ALA ARG MET SER SEQRES 15 1 281 ILE PRO PHE ILE SER ILE GLY ASN ALA TYR SER ASN PHE SEQRES 16 1 281 TYR ASP GLY TRP SER HIS PHE SER GLN ALA GLY VAL TYR SEQRES 17 1 281 GLY PHE THR THR LEU ASN ASN MET GLY GLN LEU PHE PHE SEQRES 18 1 281 ARG HIS VAL ASN LYS PRO ASN PRO ALA ALA ILE THR SER SEQRES 19 1 281 VAL ALA ARG ILE TYR PHE LYS PRO LYS HIS VAL ARG ALA SEQRES 20 1 281 TRP VAL PRO ARG PRO PRO ARG LEU CYS PRO TYR ILE ASN SEQRES 21 1 281 SER THR ASN VAL ASN PHE GLU PRO LYS PRO VAL THR GLU SEQRES 22 1 281 VAL ARG THR ASN ILE ILE THR THR SEQRES 1 2 261 SER PRO THR VAL GLU GLU CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 261 ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 261 GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY GLU TRP PRO SEQRES 4 2 261 GLU TYR LEU SER ASP ASN GLU ALA THR ALA GLU ASP GLN SEQRES 5 2 261 PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR THR SEQRES 6 2 261 LEU ASP SER VAL GLN TRP GLU ASN GLY SER PRO GLY TRP SEQRES 7 2 261 TRP TRP LYS PHE PRO ASP ALA LEU ARG ASP MET GLY LEU SEQRES 8 2 261 PHE GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG ALA SEQRES 9 2 261 GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 261 HIS GLN GLY CYS ILE LEU VAL VAL CYS VAL PRO GLU ALA SEQRES 11 2 261 GLU MET GLY SER ALA GLN THR SER GLY VAL VAL ASN TYR SEQRES 12 2 261 GLU HIS ILE SER LYS GLY GLU ILE ALA SER ARG PHE THR SEQRES 13 2 261 THR THR THR THR ALA GLU ASP HIS GLY VAL GLN ALA ALA SEQRES 14 2 261 VAL TRP ASN ALA GLY MET GLY VAL GLY VAL GLY ASN LEU SEQRES 15 2 261 THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG THR ASN SEQRES 16 2 261 ASN SER ALA THR ILE VAL MET PRO TYR VAL ASN SER VAL SEQRES 17 2 261 PRO MET ASP ASN MET TYR ARG HIS HIS ASN PHE THR LEU SEQRES 18 2 261 MET ILE ILE PRO PHE VAL PRO LEU ASP PHE SER ALA GLY SEQRES 19 2 261 ALA SER THR TYR VAL PRO ILE THR VAL THR VAL ALA PRO SEQRES 20 2 261 MET CYS ALA GLU TYR ASN GLY LEU ARG LEU ALA GLY HIS SEQRES 21 2 261 GLN SEQRES 1 3 239 GLY LEU PRO THR MET ASN THR PRO GLY SER ASN GLN PHE SEQRES 2 3 239 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 3 239 GLN PHE ASP VAL THR PRO GLU MET HIS ILE PRO GLY GLU SEQRES 4 3 239 VAL ARG ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 3 239 MET PRO ILE ASN ASN ASP SER ALA ALA LYS VAL SER SER SEQRES 6 3 239 MET GLU ALA TYR ARG VAL GLU LEU SER THR ASN THR ASN SEQRES 7 3 239 ALA GLY THR GLN VAL PHE GLY PHE GLN LEU ASN PRO GLY SEQRES 8 3 239 ALA GLU SER VAL MET ASN ARG THR LEU MET GLY GLU ILE SEQRES 9 3 239 LEU ASN TYR TYR ALA HIS TRP SER GLY SER ILE LYS ILE SEQRES 10 3 239 THR PHE VAL PHE CYS GLY SER ALA MET THR THR GLY LYS SEQRES 11 3 239 PHE LEU LEU SER TYR ALA PRO PRO GLY ALA GLY ALA PRO SEQRES 12 3 239 LYS THR ARG LYS ASP ALA MET LEU GLY THR HIS VAL VAL SEQRES 13 3 239 TRP ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE SEQRES 14 3 239 PRO TRP ILE SER GLN THR HIS TYR ARG PHE VAL GLU LYS SEQRES 15 3 239 ASP PRO TYR THR ASN ALA GLY PHE VAL THR CYS TRP TYR SEQRES 16 3 239 GLN THR SER VAL VAL SER PRO ALA SER ASN GLN PRO LYS SEQRES 17 3 239 CYS TYR MET MET CYS MET VAL SER ALA CYS ASN ASP PHE SEQRES 18 3 239 SER VAL ARG MET LEU ARG ASP THR LYS PHE ILE GLU GLN SEQRES 19 3 239 THR SER PHE TYR GLN SEQRES 1 4 68 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 4 68 THR SER LEU SER ALA THR GLY ASN SER ILE ILE HIS TYR SEQRES 3 4 68 THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SER SEQRES 4 4 68 ALA ASN ARG GLN ASP PHE THR GLN ASP PRO GLY LYS PHE SEQRES 5 4 68 THR GLU PRO MET LYS ASP VAL MET ILE LYS THR LEU PRO SEQRES 6 4 68 ALA LEU ASN HET PLM 1 301 18 HETNAM PLM PALMITIC ACID FORMUL 5 PLM C16 H32 O2 HELIX 1 AA1 ALA 1 33 GLY 1 37 5 5 HELIX 2 AA2 VAL 1 43 THR 1 47 5 5 HELIX 3 AA3 THR 1 63 ALA 1 69 1 7 HELIX 4 AA4 VAL 1 100 GLU 1 108 1 9 HELIX 5 AA5 ASP 1 159 THR 1 164 5 6 HELIX 6 AA6 PHE 1 210 LEU 1 213 5 4 HELIX 7 AA7 TYR 2 35 GLU 2 37 5 3 HELIX 8 AA8 PRO 2 56 THR 2 60 5 5 HELIX 9 AA9 PRO 2 83 ARG 2 87 5 5 HELIX 10 AB1 MET 2 89 TYR 2 98 1 10 HELIX 11 AB2 ASN 2 142 ILE 2 146 5 5 HELIX 12 AB3 ALA 2 169 ALA 2 173 5 5 HELIX 13 AB4 GLY 2 178 PHE 2 185 5 8 HELIX 14 AB5 LEU 3 43 GLU 3 48 1 6 HELIX 15 AB6 SER 3 59 SER 3 64 1 6 HELIX 16 AB7 SER 3 65 ARG 3 70 5 6 HELIX 17 AB8 THR 3 99 ASN 3 106 1 8 HELIX 18 AB9 THR 3 145 GLY 3 152 1 8 HELIX 19 AC1 ASP 4 35 ASN 4 39 5 5 HELIX 20 AC2 PRO 4 50 GLU 4 55 1 6 SHEET 1 AA1 5 LEU 1 31 THR 1 32 0 SHEET 2 AA1 5 SER 3 164 ILE 3 169 -1 O SER 3 164 N THR 1 32 SHEET 3 AA1 5 TYR 3 108 PHE 3 121 -1 N ILE 3 115 O ILE 3 169 SHEET 4 AA1 5 LYS 3 208 LEU 3 226 -1 O MET 3 212 N VAL 3 120 SHEET 5 AA1 5 VAL 3 71 SER 3 74 -1 N LEU 3 73 O CYS 3 209 SHEET 1 AA2 4 SER 3 51 MET 3 53 0 SHEET 2 AA2 4 LYS 3 208 LEU 3 226 -1 O CYS 3 213 N MET 3 53 SHEET 3 AA2 4 TYR 3 108 PHE 3 121 -1 N VAL 3 120 O MET 3 212 SHEET 4 AA2 4 ARG 3 178 PHE 3 179 -1 O ARG 3 178 N TRP 3 111 SHEET 1 AA3 4 ALA 1 72 LYS 1 80 0 SHEET 2 AA3 4 ILE 1 232 PRO 1 250 -1 O SER 1 234 N TYR 1 79 SHEET 3 AA3 4 PHE 1 110 GLN 1 127 -1 N THR 1 120 O TYR 1 239 SHEET 4 AA3 4 TYR 1 192 SER 1 193 -1 O TYR 1 192 N LEU 1 113 SHEET 1 AA4 4 ALA 1 179 ILE 1 183 0 SHEET 2 AA4 4 PHE 1 110 GLN 1 127 -1 N MET 1 117 O ILE 1 183 SHEET 3 AA4 4 ILE 1 232 PRO 1 250 -1 O TYR 1 239 N THR 1 120 SHEET 4 AA4 4 GLU 3 39 VAL 3 40 -1 O VAL 3 40 N ALA 1 247 SHEET 1 AA5 4 PHE 1 90 VAL 1 94 0 SHEET 2 AA5 4 GLN 1 218 HIS 1 223 -1 O PHE 1 221 N ASN 1 91 SHEET 3 AA5 4 THR 1 141 VAL 1 147 -1 N MET 1 145 O PHE 1 220 SHEET 4 AA5 4 SER 1 169 THR 1 173 -1 O ILE 1 170 N ILE 1 144 SHEET 1 AA6 2 TRP 1 199 HIS 1 201 0 SHEET 2 AA6 2 ALA 1 205 TYR 1 208 -1 O ALA 1 205 N HIS 1 201 SHEET 1 AA7 2 ARG 2 14 LEU 2 18 0 SHEET 2 AA7 2 SER 2 21 THR 2 25 -1 O SER 2 21 N LEU 2 18 SHEET 1 AA8 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA8 5 SER 2 197 MET 2 202 1 O VAL 2 201 N VAL 2 32 SHEET 3 AA8 5 HIS 2 99 GLN 2 111 -1 N ILE 2 108 O ILE 2 200 SHEET 4 AA8 5 VAL 2 239 LEU 2 255 -1 O THR 2 242 N GLN 2 111 SHEET 5 AA8 5 TYR 2 64 TRP 2 71 -1 N VAL 2 69 O ILE 2 241 SHEET 1 AA9 5 SER 2 153 ARG 2 154 0 SHEET 2 AA9 5 TRP 2 78 PHE 2 82 -1 N TRP 2 79 O SER 2 153 SHEET 3 AA9 5 PHE 2 219 PHE 2 231 -1 O ILE 2 223 N TRP 2 78 SHEET 4 AA9 5 HIS 2 118 PRO 2 128 -1 N LEU 2 123 O ILE 2 224 SHEET 5 AA9 5 HIS 2 187 ASN 2 191 -1 O GLN 2 188 N VAL 2 124 SHEET 1 AB1 4 GLN 3 82 GLN 3 87 0 SHEET 2 AB1 4 PHE 3 190 TYR 3 195 -1 O CYS 3 193 N VAL 3 83 SHEET 3 AB1 4 LYS 3 130 ALA 3 136 -1 N ALA 3 136 O PHE 3 190 SHEET 4 AB1 4 THR 3 153 ASP 3 158 -1 O VAL 3 155 N LEU 3 133 SHEET 1 AB2 2 GLN 4 4 THR 4 7 0 SHEET 2 AB2 2 HIS 4 26 ASN 4 29 -1 O TYR 4 27 N SER 4 6 CISPEP 1 PHE 2 82 PRO 2 83 0 2.86 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000