HEADER HYDROLASE 08-MAY-19 6RN6 TITLE DPP1 IN COMPLEX WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 5 DIPEPTIDYL TRANSFERASE; COMPND 6 EC: 3.4.14.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 10 CHAIN: B, E; COMPND 11 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 12 DIPEPTIDYL TRANSFERASE; COMPND 13 EC: 3.4.14.1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 17 CHAIN: C, F; COMPND 18 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 19 DIPEPTIDYL TRANSFERASE; COMPND 20 EC: 3.4.14.1; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSC, CPPI; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CTSC, CPPI; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: CTSC, CPPI; SOURCE 20 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS DIPEPTIDYL PEPTIDASE I, INHIBITOR COMPLEX, CATHEPSIN C, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.KACK REVDAT 3 24-JAN-24 6RN6 1 HETSYN REVDAT 2 29-JUL-20 6RN6 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 28-AUG-19 6RN6 0 JRNL AUTH H.KACK,K.DOYLE,S.J.HUGHES,M.S.BODNARCHUK,H.LONN, JRNL AUTH 2 A.VAN DE POEL,N.PALMER JRNL TITL DPP1 INHIBITORS: EXPLORING THE ROLE OF WATER IN THE S2 JRNL TITL 2 POCKET OF DPP1 WITH SUBSTITUTED PYRROLIDINES. JRNL REF ACS MED.CHEM.LETT. V. 10 1222 2019 JRNL REFN ISSN 1948-5875 JRNL PMID 31413809 JRNL DOI 10.1021/ACSMEDCHEMLETT.9B00261 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 36554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1824 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5450 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 227 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.16830 REMARK 3 B22 (A**2) : -6.16830 REMARK 3 B33 (A**2) : 12.33660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.282 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.211 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.272 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.210 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -32.1804 -1.8154 -1.7157 REMARK 3 T TENSOR REMARK 3 T11: -0.0475 T22: -0.0584 REMARK 3 T33: 0.0074 T12: 0.1383 REMARK 3 T13: -0.0696 T23: 0.033 REMARK 3 L TENSOR REMARK 3 L11: 1.8441 L22: 1.7746 REMARK 3 L33: 1.8334 L12: 0.1098 REMARK 3 L13: 0.1852 L23: -0.2838 REMARK 3 S TENSOR REMARK 3 S11: -0.1874 S12: 0.1783 S13: -0.469 REMARK 3 S21: 0.1783 S22: 0.1065 S23: -0.2762 REMARK 3 S31: -0.469 S32: -0.2762 S33: 0.0809 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -40.3902 -25.4262 0.56 REMARK 3 T TENSOR REMARK 3 T11: -0.1681 T22: -0.0035 REMARK 3 T33: 0.0247 T12: 0.0388 REMARK 3 T13: 0.0118 T23: 0.0669 REMARK 3 L TENSOR REMARK 3 L11: 2.193 L22: 1.3647 REMARK 3 L33: 1.165 L12: -0.1778 REMARK 3 L13: 0.4933 L23: -0.2877 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.0564 S13: 0.0706 REMARK 3 S21: 0.0564 S22: 0.1021 S23: -0.3077 REMARK 3 S31: 0.0706 S32: -0.3077 S33: -0.0819 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -39.077 -29.6224 -9.7286 REMARK 3 T TENSOR REMARK 3 T11: -0.1654 T22: 0.0234 REMARK 3 T33: 0.0978 T12: 0.0227 REMARK 3 T13: -0.0285 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.3169 L22: 1.8949 REMARK 3 L33: 1.6907 L12: 0.0012 REMARK 3 L13: -0.0294 L23: -0.2235 REMARK 3 S TENSOR REMARK 3 S11: -0.044 S12: -0.2349 S13: 0.1794 REMARK 3 S21: -0.2349 S22: 0.1212 S23: -0.1586 REMARK 3 S31: 0.1794 S32: -0.1586 S33: -0.0772 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -19.5397 -25.7502 26.6003 REMARK 3 T TENSOR REMARK 3 T11: 0.0161 T22: 0.0486 REMARK 3 T33: -0.1787 T12: 0.1367 REMARK 3 T13: 0.0303 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 2.6693 L22: 2.6423 REMARK 3 L33: 2.1428 L12: -0.0872 REMARK 3 L13: 1.0019 L23: -0.172 REMARK 3 S TENSOR REMARK 3 S11: -0.1895 S12: 0.3392 S13: 0.0169 REMARK 3 S21: 0.3392 S22: 0.161 S23: -0.4324 REMARK 3 S31: 0.0169 S32: -0.4324 S33: 0.0285 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): -8.534 -3.7286 21.6563 REMARK 3 T TENSOR REMARK 3 T11: 0.0399 T22: -0.1643 REMARK 3 T33: -0.0547 T12: 0.132 REMARK 3 T13: -0.1363 T23: -0.0679 REMARK 3 L TENSOR REMARK 3 L11: 1.8365 L22: 2.4522 REMARK 3 L33: 1.7947 L12: -0.3554 REMARK 3 L13: 1.2513 L23: 0.3717 REMARK 3 S TENSOR REMARK 3 S11: -0.3285 S12: 0.3905 S13: -0.4098 REMARK 3 S21: 0.3905 S22: 0.1257 S23: -0.0735 REMARK 3 S31: -0.4098 S32: -0.0735 S33: 0.2028 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { F|* } REMARK 3 ORIGIN FOR THE GROUP (A): 2.0598 -6.417 20.4194 REMARK 3 T TENSOR REMARK 3 T11: 0.01 T22: -0.1496 REMARK 3 T33: 0.0424 T12: 0.0727 REMARK 3 T13: -0.1601 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 2.9033 L22: 1.5062 REMARK 3 L33: 2.2574 L12: -0.0163 REMARK 3 L13: 2.2501 L23: -0.1425 REMARK 3 S TENSOR REMARK 3 S11: -0.375 S12: 0.2351 S13: -0.435 REMARK 3 S21: 0.2351 S22: 0.0752 S23: 0.152 REMARK 3 S31: -0.435 S32: 0.152 S33: 0.2998 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102212. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8730 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36889 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 74.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.76300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1K3B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.2 M AMMONIUMSULPHATE, 0.1 REMARK 280 M SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.46167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 148.92333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 148.92333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 74.46167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -168.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 85 REMARK 465 GLU A 86 REMARK 465 GLY A 87 REMARK 465 SER A 88 REMARK 465 ASP C 371 REMARK 465 GLU D 85 REMARK 465 GLU D 86 REMARK 465 GLY D 87 REMARK 465 SER D 88 REMARK 465 LYS D 89 REMARK 465 GLY D 119 REMARK 465 ALA E 205 REMARK 465 ASP F 371 REMARK 465 SER F 394 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 89 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 25.12 -152.25 REMARK 500 TYR A 64 -113.80 51.91 REMARK 500 ALA B 229 -145.71 58.39 REMARK 500 ILE B 282 -64.89 -104.73 REMARK 500 GLU B 311 -74.51 -21.97 REMARK 500 LYS B 360 -50.72 -124.47 REMARK 500 ILE C 429 46.67 -140.51 REMARK 500 SER D 24 173.34 -54.77 REMARK 500 CYS D 30 52.77 -108.82 REMARK 500 ASP D 48 24.90 -149.88 REMARK 500 TYR D 64 -101.17 57.26 REMARK 500 ASN E 215 71.36 -151.86 REMARK 500 ALA E 229 -133.96 56.08 REMARK 500 ASP E 312 53.33 30.85 REMARK 500 ASP E 355 -30.61 126.74 REMARK 500 LYS E 360 -48.98 -141.19 REMARK 500 ASN F 380 -10.52 -140.76 REMARK 500 ILE F 429 47.20 -143.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 6RN6 A 1 119 UNP P53634 CATC_HUMAN 25 143 DBREF 6RN6 B 206 367 UNP P53634 CATC_HUMAN 230 391 DBREF 6RN6 C 371 439 UNP P53634 CATC_HUMAN 395 463 DBREF 6RN6 D 1 119 UNP P53634 CATC_HUMAN 25 143 DBREF 6RN6 E 206 367 UNP P53634 CATC_HUMAN 230 391 DBREF 6RN6 F 371 439 UNP P53634 CATC_HUMAN 395 463 SEQADV 6RN6 ALA B 205 UNP P53634 EXPRESSION TAG SEQADV 6RN6 ALA E 205 UNP P53634 EXPRESSION TAG SEQRES 1 A 119 ASP THR PRO ALA ASN CYS THR TYR LEU ASP LEU LEU GLY SEQRES 2 A 119 THR TRP VAL PHE GLN VAL GLY SER SER GLY SER GLN ARG SEQRES 3 A 119 ASP VAL ASN CYS SER VAL MET GLY PRO GLN GLU LYS LYS SEQRES 4 A 119 VAL VAL VAL TYR LEU GLN LYS LEU ASP THR ALA TYR ASP SEQRES 5 A 119 ASP LEU GLY ASN SER GLY HIS PHE THR ILE ILE TYR ASN SEQRES 6 A 119 GLN GLY PHE GLU ILE VAL LEU ASN ASP TYR LYS TRP PHE SEQRES 7 A 119 ALA PHE PHE LYS TYR LYS GLU GLU GLY SER LYS VAL THR SEQRES 8 A 119 THR TYR CYS ASN GLU THR MET THR GLY TRP VAL HIS ASP SEQRES 9 A 119 VAL LEU GLY ARG ASN TRP ALA CYS PHE THR GLY LYS LYS SEQRES 10 A 119 VAL GLY SEQRES 1 B 163 ALA HIS LEU PRO THR SER TRP ASP TRP ARG ASN VAL HIS SEQRES 2 B 163 GLY ILE ASN PHE VAL SER PRO VAL ARG ASN GLN ALA SER SEQRES 3 B 163 CYS GLY SER CYS TYR SER PHE ALA SER MET GLY MET LEU SEQRES 4 B 163 GLU ALA ARG ILE ARG ILE LEU THR ASN ASN SER GLN THR SEQRES 5 B 163 PRO ILE LEU SER PRO GLN GLU VAL VAL SER CYS SER GLN SEQRES 6 B 163 TYR ALA GLN GLY CYS GLU GLY GLY PHE PRO TYR LEU ILE SEQRES 7 B 163 ALA GLY LYS TYR ALA GLN ASP PHE GLY LEU VAL GLU GLU SEQRES 8 B 163 ALA CYS PHE PRO TYR THR GLY THR ASP SER PRO CYS LYS SEQRES 9 B 163 MET LYS GLU ASP CYS PHE ARG TYR TYR SER SER GLU TYR SEQRES 10 B 163 HIS TYR VAL GLY GLY PHE TYR GLY GLY CYS ASN GLU ALA SEQRES 11 B 163 LEU MET LYS LEU GLU LEU VAL HIS HIS GLY PRO MET ALA SEQRES 12 B 163 VAL ALA PHE GLU VAL TYR ASP ASP PHE LEU HIS TYR LYS SEQRES 13 B 163 LYS GLY ILE TYR HIS HIS THR SEQRES 1 C 69 ASP PRO PHE ASN PRO PHE GLU LEU THR ASN HIS ALA VAL SEQRES 2 C 69 LEU LEU VAL GLY TYR GLY THR ASP SER ALA SER GLY MET SEQRES 3 C 69 ASP TYR TRP ILE VAL LYS ASN SER TRP GLY THR GLY TRP SEQRES 4 C 69 GLY GLU ASN GLY TYR PHE ARG ILE ARG ARG GLY THR ASP SEQRES 5 C 69 GLU CYS ALA ILE GLU SER ILE ALA VAL ALA ALA THR PRO SEQRES 6 C 69 ILE PRO LYS LEU SEQRES 1 D 119 ASP THR PRO ALA ASN CYS THR TYR LEU ASP LEU LEU GLY SEQRES 2 D 119 THR TRP VAL PHE GLN VAL GLY SER SER GLY SER GLN ARG SEQRES 3 D 119 ASP VAL ASN CYS SER VAL MET GLY PRO GLN GLU LYS LYS SEQRES 4 D 119 VAL VAL VAL TYR LEU GLN LYS LEU ASP THR ALA TYR ASP SEQRES 5 D 119 ASP LEU GLY ASN SER GLY HIS PHE THR ILE ILE TYR ASN SEQRES 6 D 119 GLN GLY PHE GLU ILE VAL LEU ASN ASP TYR LYS TRP PHE SEQRES 7 D 119 ALA PHE PHE LYS TYR LYS GLU GLU GLY SER LYS VAL THR SEQRES 8 D 119 THR TYR CYS ASN GLU THR MET THR GLY TRP VAL HIS ASP SEQRES 9 D 119 VAL LEU GLY ARG ASN TRP ALA CYS PHE THR GLY LYS LYS SEQRES 10 D 119 VAL GLY SEQRES 1 E 163 ALA HIS LEU PRO THR SER TRP ASP TRP ARG ASN VAL HIS SEQRES 2 E 163 GLY ILE ASN PHE VAL SER PRO VAL ARG ASN GLN ALA SER SEQRES 3 E 163 CYS GLY SER CYS TYR SER PHE ALA SER MET GLY MET LEU SEQRES 4 E 163 GLU ALA ARG ILE ARG ILE LEU THR ASN ASN SER GLN THR SEQRES 5 E 163 PRO ILE LEU SER PRO GLN GLU VAL VAL SER CYS SER GLN SEQRES 6 E 163 TYR ALA GLN GLY CYS GLU GLY GLY PHE PRO TYR LEU ILE SEQRES 7 E 163 ALA GLY LYS TYR ALA GLN ASP PHE GLY LEU VAL GLU GLU SEQRES 8 E 163 ALA CYS PHE PRO TYR THR GLY THR ASP SER PRO CYS LYS SEQRES 9 E 163 MET LYS GLU ASP CYS PHE ARG TYR TYR SER SER GLU TYR SEQRES 10 E 163 HIS TYR VAL GLY GLY PHE TYR GLY GLY CYS ASN GLU ALA SEQRES 11 E 163 LEU MET LYS LEU GLU LEU VAL HIS HIS GLY PRO MET ALA SEQRES 12 E 163 VAL ALA PHE GLU VAL TYR ASP ASP PHE LEU HIS TYR LYS SEQRES 13 E 163 LYS GLY ILE TYR HIS HIS THR SEQRES 1 F 69 ASP PRO PHE ASN PRO PHE GLU LEU THR ASN HIS ALA VAL SEQRES 2 F 69 LEU LEU VAL GLY TYR GLY THR ASP SER ALA SER GLY MET SEQRES 3 F 69 ASP TYR TRP ILE VAL LYS ASN SER TRP GLY THR GLY TRP SEQRES 4 F 69 GLY GLU ASN GLY TYR PHE ARG ILE ARG ARG GLY THR ASP SEQRES 5 F 69 GLU CYS ALA ILE GLU SER ILE ALA VAL ALA ALA THR PRO SEQRES 6 F 69 ILE PRO LYS LEU HET NAG A 201 14 HET NAG A 202 14 HET GOL A 203 6 HET NAG B 401 14 HET CL B 402 1 HET CL B 403 1 HET CL B 404 1 HET CL C 501 1 HET K9Q E 401 25 HET CL E 402 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM K9Q (2~{S},4~{R})-~{N}-[(2~{S})-1-AZANYL-3-(4- HETNAM 2 K9Q PHENYLPHENYL)PROPAN-2-YL]-4-OXIDANYL-PYRROLIDINE-2- HETNAM 3 K9Q CARBOXAMIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 NAG 3(C8 H15 N O6) FORMUL 9 GOL C3 H8 O3 FORMUL 11 CL 5(CL 1-) FORMUL 15 K9Q C20 H25 N3 O2 FORMUL 17 HOH *227(H2 O) HELIX 1 AA1 THR A 7 LEU A 12 1 6 HELIX 2 AA2 SER B 233 THR B 251 1 19 HELIX 3 AA3 SER B 260 SER B 268 1 9 HELIX 4 AA4 GLN B 272 GLY B 276 5 5 HELIX 5 AA5 PHE B 278 ALA B 283 1 6 HELIX 6 AA6 GLY B 284 PHE B 290 1 7 HELIX 7 AA7 ASN B 332 GLY B 344 1 13 HELIX 8 AA8 TYR B 353 HIS B 358 1 6 HELIX 9 AA9 ASP C 422 ILE C 426 5 5 HELIX 10 AB1 THR D 7 LEU D 12 1 6 HELIX 11 AB2 SER E 233 THR E 251 1 19 HELIX 12 AB3 SER E 260 SER E 268 1 9 HELIX 13 AB4 GLN E 272 GLY E 276 5 5 HELIX 14 AB5 PHE E 278 ALA E 283 1 6 HELIX 15 AB6 GLY E 284 PHE E 290 1 7 HELIX 16 AB7 GLU E 294 PHE E 298 5 5 HELIX 17 AB8 ASN E 332 GLY E 344 1 13 HELIX 18 AB9 ASP F 422 ILE F 426 5 5 SHEET 1 AA112 TYR A 75 LYS A 84 0 SHEET 2 AA112 THR A 91 THR A 97 -1 O THR A 91 N LYS A 84 SHEET 3 AA112 TRP A 110 LYS A 117 -1 O LYS A 117 N ASN A 95 SHEET 4 AA112 TYR A 75 LYS A 84 0 SHEET 5 AA112 GLY A 67 LEU A 72 -1 N ILE A 70 O TRP A 77 SHEET 6 AA112 SER A 57 ILE A 63 -1 N ILE A 63 O GLY A 67 SHEET 7 AA112 THR A 49 TYR A 51 -1 N ALA A 50 O GLY A 58 SHEET 8 AA112 GLN A 36 GLN A 45 -1 N GLN A 45 O THR A 49 SHEET 9 AA112 GLY A 13 SER A 24 -1 N VAL A 19 O LYS A 38 SHEET 10 AA112 TRP A 110 LYS A 117 -1 O TRP A 110 N SER A 24 SHEET 11 AA112 GLY A 100 ASP A 104 -1 N GLY A 100 O PHE A 113 SHEET 12 AA112 TRP A 110 LYS A 117 -1 O PHE A 113 N GLY A 100 SHEET 1 AA2 3 TRP B 211 ASP B 212 0 SHEET 2 AA2 3 HIS C 381 THR C 390 -1 O TYR C 388 N TRP B 211 SHEET 3 AA2 3 MET B 346 PHE B 350 -1 N VAL B 348 O VAL C 383 SHEET 1 AA3 5 TRP B 211 ASP B 212 0 SHEET 2 AA3 5 HIS C 381 THR C 390 -1 O TYR C 388 N TRP B 211 SHEET 3 AA3 5 ASP C 397 LYS C 402 -1 O TYR C 398 N GLY C 389 SHEET 4 AA3 5 TYR C 414 ARG C 418 -1 O PHE C 415 N VAL C 401 SHEET 5 AA3 5 ILE B 363 TYR B 364 1 N TYR B 364 O ARG C 416 SHEET 1 AA4 2 SER B 318 TYR B 323 0 SHEET 2 AA4 2 VAL C 431 PRO C 435 -1 O ALA C 432 N HIS B 322 SHEET 1 AA512 TYR D 75 TYR D 83 0 SHEET 2 AA512 THR D 92 THR D 97 -1 O TYR D 93 N LYS D 82 SHEET 3 AA512 TRP D 110 LYS D 117 -1 O LYS D 117 N ASN D 95 SHEET 4 AA512 TYR D 75 TYR D 83 0 SHEET 5 AA512 GLY D 67 LEU D 72 -1 N ILE D 70 O TRP D 77 SHEET 6 AA512 SER D 57 ILE D 63 -1 N ILE D 63 O GLY D 67 SHEET 7 AA512 THR D 49 ASP D 52 -1 N ALA D 50 O GLY D 58 SHEET 8 AA512 LYS D 38 GLN D 45 -1 N TYR D 43 O TYR D 51 SHEET 9 AA512 GLY D 13 GLY D 20 -1 N VAL D 19 O LYS D 38 SHEET 10 AA512 TRP D 110 LYS D 117 -1 O LYS D 116 N VAL D 16 SHEET 11 AA512 GLY D 100 ASP D 104 -1 N GLY D 100 O PHE D 113 SHEET 12 AA512 TRP D 110 LYS D 117 -1 O PHE D 113 N GLY D 100 SHEET 1 AA6 3 TRP E 211 ASP E 212 0 SHEET 2 AA6 3 HIS F 381 THR F 390 -1 O TYR F 388 N TRP E 211 SHEET 3 AA6 3 MET E 346 PHE E 350 -1 N VAL E 348 O VAL F 383 SHEET 1 AA7 5 TRP E 211 ASP E 212 0 SHEET 2 AA7 5 HIS F 381 THR F 390 -1 O TYR F 388 N TRP E 211 SHEET 3 AA7 5 ASP F 397 LYS F 402 -1 O LYS F 402 N LEU F 384 SHEET 4 AA7 5 TYR F 414 ARG F 418 -1 O PHE F 415 N VAL F 401 SHEET 5 AA7 5 ILE E 363 TYR E 364 1 N TYR E 364 O ARG F 416 SHEET 1 AA8 2 SER E 318 TYR E 323 0 SHEET 2 AA8 2 VAL F 431 PRO F 435 -1 O ALA F 432 N HIS E 322 SSBOND 1 CYS A 6 CYS A 94 1555 1555 2.57 SSBOND 2 CYS A 30 CYS A 112 1555 1555 2.79 SSBOND 3 CYS B 231 CYS B 274 1555 1555 2.49 SSBOND 4 CYS B 267 CYS B 307 1555 1555 2.60 SSBOND 5 CYS B 297 CYS B 313 1555 1555 2.78 SSBOND 6 CYS D 6 CYS D 94 1555 1555 2.77 SSBOND 7 CYS D 30 CYS D 112 1555 1555 2.69 SSBOND 8 CYS E 267 CYS E 307 1555 1555 2.92 SSBOND 9 CYS E 297 CYS E 313 1555 1555 2.94 LINK ND2 ASN A 5 C1 NAG A 201 1555 1555 1.43 LINK ND2 ASN A 95 C1 NAG A 202 1555 1555 1.43 LINK ND2 ASN B 252 C1 NAG B 401 1555 1555 1.44 LINK SG CYS E 234 C1 K9Q E 401 1555 1555 1.79 CISPEP 1 LYS A 46 LEU A 47 0 2.31 CISPEP 2 LYS D 46 LEU D 47 0 1.09 CRYST1 84.591 84.591 223.385 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011822 0.006825 0.000000 0.00000 SCALE2 0.000000 0.013650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004477 0.00000