HEADER HYDROLASE 08-MAY-19 6RNI TITLE DPP1 IN COMPLEX WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 5 DIPEPTIDYL TRANSFERASE; COMPND 6 EC: 3.4.14.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 12 DIPEPTIDYL TRANSFERASE; COMPND 13 EC: 3.4.14.1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DIPEPTIDYL PEPTIDASE 1; COMPND 17 CHAIN: C; COMPND 18 SYNONYM: CATHEPSIN C,CATHEPSIN J,DIPEPTIDYL PEPTIDASE I,DPPI, COMPND 19 DIPEPTIDYL TRANSFERASE; COMPND 20 EC: 3.4.14.1; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSC, CPPI; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CTSC, CPPI; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: CTSC, CPPI; SOURCE 20 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS DIPEPTIDYL PEPTIDASE I, INHIBITOR COMPLEX, CATHEPSIN C, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.KACK REVDAT 3 24-JAN-24 6RNI 1 HETSYN REVDAT 2 29-JUL-20 6RNI 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 28-AUG-19 6RNI 0 JRNL AUTH H.KACK,K.DOYLE,S.J.HUGHES,M.S.BODNARCHUK,H.LONN, JRNL AUTH 2 A.VAN DE POEL,N.PALMER JRNL TITL DPP1 INHIBITORS: EXPLORING THE ROLE OF WATER IN THE S2 JRNL TITL 2 POCKET OF DPP1 WITH SUBSTITUTED PYRROLIDINES. JRNL REF ACS MED.CHEM.LETT. V. 10 1222 2019 JRNL REFN ISSN 1948-5875 JRNL PMID 31413809 JRNL DOI 10.1021/ACSMEDCHEMLETT.9B00261 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 58541 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2942 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.06 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1171 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3072 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1099 REMARK 3 BIN R VALUE (WORKING SET) : 0.3057 REMARK 3 BIN FREE R VALUE : 0.3286 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.15 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2766 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.47190 REMARK 3 B22 (A**2) : -5.75800 REMARK 3 B33 (A**2) : 1.28610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.081 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.076 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.080 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.076 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2959 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4019 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 967 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 503 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2959 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 373 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3517 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.62 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.77 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|118 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.7738 6.9980 -37.3673 REMARK 3 T TENSOR REMARK 3 T11: 0.0975 T22: -0.0527 REMARK 3 T33: 0.0151 T12: 0.0167 REMARK 3 T13: 0.0214 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.7542 L22: 1.3833 REMARK 3 L33: 0.9817 L12: -0.2224 REMARK 3 L13: 0.1019 L23: 0.3200 REMARK 3 S TENSOR REMARK 3 S11: -0.0742 S12: -0.0976 S13: 0.0236 REMARK 3 S21: 0.0429 S22: 0.0153 S23: 0.0910 REMARK 3 S31: -0.0668 S32: -0.1168 S33: 0.0589 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|205 - B|367 } REMARK 3 ORIGIN FOR THE GROUP (A): -13.2243 -17.3880 -39.8509 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: -0.0828 REMARK 3 T33: 0.0107 T12: -0.0155 REMARK 3 T13: 0.0295 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.7184 L22: 1.1070 REMARK 3 L33: 0.6156 L12: -0.0344 REMARK 3 L13: 0.1067 L23: -0.1479 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: -0.0363 S13: -0.1135 REMARK 3 S21: -0.0177 S22: -0.0207 S23: 0.0141 REMARK 3 S31: 0.1383 S32: -0.0334 S33: 0.0203 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|372 - C|439 } REMARK 3 ORIGIN FOR THE GROUP (A): -19.1762 -20.0923 -48.2126 REMARK 3 T TENSOR REMARK 3 T11: 0.1576 T22: -0.0809 REMARK 3 T33: 0.0072 T12: -0.0306 REMARK 3 T13: 0.0097 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.5945 L22: 1.1789 REMARK 3 L33: 0.6979 L12: -0.3164 REMARK 3 L13: 0.1396 L23: -0.3372 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0144 S13: -0.1360 REMARK 3 S21: -0.1551 S22: -0.0139 S23: 0.1168 REMARK 3 S31: 0.2225 S32: -0.0973 S33: 0.0017 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102240. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58771 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 69.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.96600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1K3B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.2 M AMMONIUM SULPHATE, 0.1 REMARK 280 M SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.68350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.73050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.40500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.68350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.73050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.40500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.68350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.73050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.40500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.68350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.73050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.40500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 119 REMARK 465 GLY B 368 REMARK 465 LEU B 369 REMARK 465 ARG B 370 REMARK 465 ASP C 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 33 -83.46 -87.69 REMARK 500 ASP A 48 28.40 -151.93 REMARK 500 TYR A 64 -115.76 52.68 REMARK 500 GLU A 86 65.92 -113.60 REMARK 500 ALA B 229 -149.88 60.93 REMARK 500 SER B 230 53.98 -91.71 REMARK 500 ILE B 282 -63.77 -106.80 REMARK 500 HIS B 358 35.60 -99.02 REMARK 500 PHE C 373 107.83 -55.33 REMARK 500 ASN C 380 -3.01 -142.91 REMARK 500 ILE C 429 48.65 -144.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 6RNI A 1 119 UNP P53634 CATC_HUMAN 25 143 DBREF 6RNI B 205 370 UNP P53634 CATC_HUMAN 229 394 DBREF 6RNI C 371 439 UNP P53634 CATC_HUMAN 395 463 SEQRES 1 A 119 ASP THR PRO ALA ASN CYS THR TYR LEU ASP LEU LEU GLY SEQRES 2 A 119 THR TRP VAL PHE GLN VAL GLY SER SER GLY SER GLN ARG SEQRES 3 A 119 ASP VAL ASN CYS SER VAL MET GLY PRO GLN GLU LYS LYS SEQRES 4 A 119 VAL VAL VAL TYR LEU GLN LYS LEU ASP THR ALA TYR ASP SEQRES 5 A 119 ASP LEU GLY ASN SER GLY HIS PHE THR ILE ILE TYR ASN SEQRES 6 A 119 GLN GLY PHE GLU ILE VAL LEU ASN ASP TYR LYS TRP PHE SEQRES 7 A 119 ALA PHE PHE LYS TYR LYS GLU GLU GLY SER LYS VAL THR SEQRES 8 A 119 THR TYR CYS ASN GLU THR MET THR GLY TRP VAL HIS ASP SEQRES 9 A 119 VAL LEU GLY ARG ASN TRP ALA CYS PHE THR GLY LYS LYS SEQRES 10 A 119 VAL GLY SEQRES 1 B 166 LEU HIS LEU PRO THR SER TRP ASP TRP ARG ASN VAL HIS SEQRES 2 B 166 GLY ILE ASN PHE VAL SER PRO VAL ARG ASN GLN ALA SER SEQRES 3 B 166 CYS GLY SER CYS TYR SER PHE ALA SER MET GLY MET LEU SEQRES 4 B 166 GLU ALA ARG ILE ARG ILE LEU THR ASN ASN SER GLN THR SEQRES 5 B 166 PRO ILE LEU SER PRO GLN GLU VAL VAL SER CYS SER GLN SEQRES 6 B 166 TYR ALA GLN GLY CYS GLU GLY GLY PHE PRO TYR LEU ILE SEQRES 7 B 166 ALA GLY LYS TYR ALA GLN ASP PHE GLY LEU VAL GLU GLU SEQRES 8 B 166 ALA CYS PHE PRO TYR THR GLY THR ASP SER PRO CYS LYS SEQRES 9 B 166 MET LYS GLU ASP CYS PHE ARG TYR TYR SER SER GLU TYR SEQRES 10 B 166 HIS TYR VAL GLY GLY PHE TYR GLY GLY CYS ASN GLU ALA SEQRES 11 B 166 LEU MET LYS LEU GLU LEU VAL HIS HIS GLY PRO MET ALA SEQRES 12 B 166 VAL ALA PHE GLU VAL TYR ASP ASP PHE LEU HIS TYR LYS SEQRES 13 B 166 LYS GLY ILE TYR HIS HIS THR GLY LEU ARG SEQRES 1 C 69 ASP PRO PHE ASN PRO PHE GLU LEU THR ASN HIS ALA VAL SEQRES 2 C 69 LEU LEU VAL GLY TYR GLY THR ASP SER ALA SER GLY MET SEQRES 3 C 69 ASP TYR TRP ILE VAL LYS ASN SER TRP GLY THR GLY TRP SEQRES 4 C 69 GLY GLU ASN GLY TYR PHE ARG ILE ARG ARG GLY THR ASP SEQRES 5 C 69 GLU CYS ALA ILE GLU SER ILE ALA VAL ALA ALA THR PRO SEQRES 6 C 69 ILE PRO LYS LEU MODRES 6RNI NAG D 1 NAG -D MODRES 6RNI NAG D 2 NAG -D MODRES 6RNI NAG B 403 NAG -D MODRES 6RNI NAG A 203 NAG -D HET NAG D 1 14 HET NAG D 2 14 HET NAG A 203 14 HET DMS A 204 4 HET DMS A 205 4 HET CL B 401 1 HET KAQ B 402 28 HET NAG B 403 14 HET DMS B 404 4 HET ACT B 405 4 HET DMS C 501 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM DMS DIMETHYL SULFOXIDE HETNAM CL CHLORIDE ION HETNAM KAQ (2~{S},4~{S})-~{N}-[(2~{S})-1-AZANYL-3-[4-(4- HETNAM 2 KAQ CYANOPHENYL)PHENYL]PROPAN-2-YL]-4-METHYLSULFANYL- HETNAM 3 KAQ PYRROLIDINE-2-CARBOXAMIDE HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 4(C8 H15 N O6) FORMUL 6 DMS 4(C2 H6 O S) FORMUL 8 CL CL 1- FORMUL 9 KAQ C22 H26 N4 O S FORMUL 12 ACT C2 H3 O2 1- FORMUL 14 HOH *168(H2 O) HELIX 1 AA1 THR A 7 LEU A 12 1 6 HELIX 2 AA2 SER B 233 THR B 251 1 19 HELIX 3 AA3 SER B 260 SER B 268 1 9 HELIX 4 AA4 GLN B 272 GLY B 276 5 5 HELIX 5 AA5 PHE B 278 ALA B 283 1 6 HELIX 6 AA6 GLY B 284 PHE B 290 1 7 HELIX 7 AA7 GLU B 294 PHE B 298 5 5 HELIX 8 AA8 ASN B 332 GLY B 344 1 13 HELIX 9 AA9 TYR B 353 HIS B 358 1 6 HELIX 10 AB1 ASP C 422 ILE C 426 5 5 SHEET 1 AA112 TYR A 75 GLU A 86 0 SHEET 2 AA112 LYS A 89 THR A 97 -1 O TYR A 93 N LYS A 82 SHEET 3 AA112 TRP A 110 LYS A 117 -1 O LYS A 117 N ASN A 95 SHEET 4 AA112 TYR A 75 GLU A 86 0 SHEET 5 AA112 GLY A 67 LEU A 72 -1 N ILE A 70 O TRP A 77 SHEET 6 AA112 SER A 57 ILE A 63 -1 N ILE A 63 O GLY A 67 SHEET 7 AA112 THR A 49 ASP A 52 -1 N ALA A 50 O GLY A 58 SHEET 8 AA112 LYS A 38 GLN A 45 -1 N GLN A 45 O THR A 49 SHEET 9 AA112 GLY A 13 VAL A 19 -1 N PHE A 17 O VAL A 40 SHEET 10 AA112 TRP A 110 LYS A 117 -1 O THR A 114 N GLN A 18 SHEET 11 AA112 GLY A 100 ASP A 104 -1 N GLY A 100 O PHE A 113 SHEET 12 AA112 TRP A 110 LYS A 117 -1 O PHE A 113 N GLY A 100 SHEET 1 AA2 3 TRP B 211 ASP B 212 0 SHEET 2 AA2 3 HIS C 381 THR C 390 -1 O TYR C 388 N TRP B 211 SHEET 3 AA2 3 MET B 346 PHE B 350 -1 N MET B 346 O LEU C 385 SHEET 1 AA3 5 TRP B 211 ASP B 212 0 SHEET 2 AA3 5 HIS C 381 THR C 390 -1 O TYR C 388 N TRP B 211 SHEET 3 AA3 5 ASP C 397 LYS C 402 -1 O LYS C 402 N LEU C 384 SHEET 4 AA3 5 TYR C 414 ARG C 418 -1 O PHE C 415 N VAL C 401 SHEET 5 AA3 5 ILE B 363 TYR B 364 1 N TYR B 364 O ARG C 416 SHEET 1 AA4 2 SER B 318 TYR B 323 0 SHEET 2 AA4 2 VAL C 431 PRO C 435 -1 O THR C 434 N GLU B 320 SSBOND 1 CYS A 6 CYS A 94 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 112 1555 1555 2.04 SSBOND 3 CYS B 231 CYS B 274 1555 1555 2.04 SSBOND 4 CYS B 267 CYS B 307 1555 1555 2.03 SSBOND 5 CYS B 297 CYS B 313 1555 1555 2.03 LINK ND2 ASN A 5 C1 NAG A 203 1555 1555 1.43 LINK ND2 ASN A 95 C1 NAG D 1 1555 1555 1.43 LINK SG CYS B 234 C2 KAQ B 402 1555 1555 1.76 LINK ND2 ASN B 252 C1 NAG B 403 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.42 CISPEP 1 LYS A 46 LEU A 47 0 3.01 CRYST1 87.367 87.461 114.810 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011446 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011434 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008710 0.00000