HEADER ANTIMICROBIAL PROTEIN 10-MAY-19 6RO5 TITLE 1YR-Y: LYSOZYME WITH RE CLUSTER 1 YEAR ON SHELF COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS RADIO-PHARMACEUTICALS, ORGANOMETALLIC COMPLEX, METAL BINDING PROTEIN, KEYWDS 2 ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BRINK,J.R.HELLIWELL REVDAT 3 24-JAN-24 6RO5 1 LINK REVDAT 2 31-JUL-19 6RO5 1 JRNL REMARK REVDAT 1 19-JUN-19 6RO5 0 JRNL AUTH A.BRINK,J.R.HELLIWELL JRNL TITL FORMATION OF A HIGHLY DENSE TETRA-RHENIUM CLUSTER IN A JRNL TITL 2 PROTEIN CRYSTAL AND ITS IMPLICATIONS IN MEDICAL IMAGING. JRNL REF IUCRJ V. 6 695 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31316813 JRNL DOI 10.1107/S2052252519006651 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2951 - 3.6183 1.00 2836 161 0.2140 0.2166 REMARK 3 2 3.6183 - 2.8724 1.00 2738 124 0.2326 0.2876 REMARK 3 3 2.8724 - 2.5095 1.00 2658 166 0.2394 0.2924 REMARK 3 4 2.5095 - 2.2801 1.00 2675 159 0.2420 0.3094 REMARK 3 5 2.2801 - 2.1167 1.00 2655 120 0.2517 0.3073 REMARK 3 6 2.1167 - 1.9919 1.00 2658 141 0.2725 0.3352 REMARK 3 7 1.9919 - 1.8921 1.00 2637 137 0.2876 0.3111 REMARK 3 8 1.8921 - 1.8098 1.00 2649 129 0.3151 0.3601 REMARK 3 9 1.8098 - 1.7401 1.00 2655 120 0.3467 0.4086 REMARK 3 10 1.7401 - 1.6801 1.00 2625 134 0.3939 0.4067 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2186 REMARK 3 ANGLE : 0.671 3016 REMARK 3 CHIRALITY : 0.039 293 REMARK 3 PLANARITY : 0.002 375 REMARK 3 DIHEDRAL : 12.142 1278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RO5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102288. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29804 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 31.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2W1Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: STANDARD HEN EGG WHITE LYSOZYME (20 REMARK 280 MG) CRYSTALLISATION CONDITIONS WERE USED OF 10% NACL, NAOAC 0.04 REMARK 280 M (PH 4.7) AND THE FAC-[ET4N]2[RE(CO)3(BR)3] AT 0.03 M IN 1.4 ML REMARK 280 WATER, IN SITTING DROP CONDITIONS, INITIALLY INCLUDED WITH DMSO REMARK 280 (AT 7.5 % V/V)., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.94000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.33500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.33500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.94000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 68 29.54 -151.34 REMARK 500 TRP B 62 -38.01 -132.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QEB A 213 RE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 5 NH2 REMARK 620 2 QEB A 213 O1 165.3 REMARK 620 3 QEB A 213 O16 91.8 74.5 REMARK 620 4 QEB A 213 O5 97.8 73.4 73.5 REMARK 620 5 HOH A 321 O 82.4 106.8 108.5 177.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 RRE A 218 RE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 15 NE2 REMARK 620 2 RRE A 218 C4 85.1 REMARK 620 3 RRE A 218 O11 86.7 100.2 REMARK 620 4 RRE A 218 C6 90.5 85.1 173.7 REMARK 620 5 RRE A 218 C5 173.3 88.5 96.3 87.2 REMARK 620 6 RRE A 218 O12 90.1 175.2 79.4 95.0 96.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 RE A 209 RE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 18 OD1 REMARK 620 2 HOH A 324 O 113.1 REMARK 620 3 HOH A 325 O 160.3 80.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 60 O REMARK 620 2 CYS A 64 O 88.1 REMARK 620 3 SER A 72 OG 86.5 170.6 REMARK 620 4 ARG A 73 O 93.2 91.1 96.9 REMARK 620 5 HOH A 315 O 103.4 94.8 78.9 162.5 REMARK 620 6 HOH A 316 O 167.2 99.4 84.5 97.0 65.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QEB A 215 RE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 61 NH2 REMARK 620 2 QEB A 215 O1 92.7 REMARK 620 3 QEB A 215 O16 107.1 71.8 REMARK 620 4 QEB A 215 O3 169.2 77.7 74.9 REMARK 620 5 HOH A 301 O 52.5 122.8 151.8 129.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QEB A 216 RE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 61 NH1 REMARK 620 2 QEB A 216 O16 154.7 REMARK 620 3 QEB A 216 O3 128.3 73.7 REMARK 620 4 QEB A 216 O5 122.0 72.1 74.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 RE A 208 RE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 119 OD2 REMARK 620 2 ARG A 125 NH2 102.2 REMARK 620 3 HOH A 317 O 79.2 97.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QEB A 214 RE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 323 O REMARK 620 2 QEB A 214 O1 108.0 REMARK 620 3 QEB A 214 O3 102.3 74.6 REMARK 620 4 QEB A 214 O5 176.3 73.4 74.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QEB A 215 RE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 303 O REMARK 620 2 QEB A 215 O16 94.8 REMARK 620 3 QEB A 215 O3 169.2 75.2 REMARK 620 4 QEB A 215 O5 97.1 74.6 76.7 REMARK 620 5 HOH B 318 O 93.4 97.3 91.8 167.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 RRE B 210 RE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 15 NE2 REMARK 620 2 RRE B 210 C4 80.0 REMARK 620 3 RRE B 210 O11 76.0 98.7 REMARK 620 4 RRE B 210 C6 98.7 86.3 171.9 REMARK 620 5 RRE B 210 C5 150.8 74.1 94.4 93.1 REMARK 620 6 RRE B 210 O12 103.9 173.7 77.8 97.9 100.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 207 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 60 O REMARK 620 2 CYS B 64 O 91.8 REMARK 620 3 SER B 72 OG 80.4 167.8 REMARK 620 4 ARG B 73 O 94.6 92.5 97.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QEB A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QEB A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QEB A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QEB A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QEB A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RRE A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RE B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RRE B 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 211 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5NBJ RELATED DB: PDB DBREF 6RO5 A 1 129 UNP P00698 LYSC_CHICK 19 147 DBREF 6RO5 B 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU SEQRES 1 B 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 B 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 B 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 B 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 B 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 B 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 B 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 B 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 B 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 B 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET RE A 201 1 HET RE A 202 1 HET CL A 203 1 HET CL A 204 1 HET NA A 205 1 HET ACT A 206 4 HET RE A 207 1 HET RE A 208 1 HET RE A 209 1 HET RE A 210 1 HET RE A 211 1 HET QEB A 212 8 HET QEB A 213 8 HET QEB A 214 8 HET QEB A 215 8 HET QEB A 216 8 HET QEB A 217 8 HET RRE A 218 9 HET RE B 201 1 HET RE B 202 1 HET RE B 203 1 HET RE B 204 1 HET CL B 205 1 HET CL B 206 1 HET NA B 207 1 HET RE B 208 1 HET RE B 209 1 HET RRE B 210 9 HET ACT B 211 7 HETNAM RE RHENIUM HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM ACT ACETATE ION HETNAM QEB [RE4(MU3-OH)4(CO)12] HETNAM RRE FAC-TRICARBONYL-TRIAQUA RHENIUM(I) FORMUL 3 RE 13(RE) FORMUL 5 CL 4(CL 1-) FORMUL 7 NA 2(NA 1+) FORMUL 8 ACT 2(C2 H3 O2 1-) FORMUL 14 QEB 6(O4 RE4) FORMUL 20 RRE 2(C3 O6 RE 1+) FORMUL 32 HOH *50(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ILE A 124 5 6 HELIX 9 AA9 GLY B 4 HIS B 15 1 12 HELIX 10 AB1 ASN B 19 TYR B 23 5 5 HELIX 11 AB2 SER B 24 ASN B 37 1 14 HELIX 12 AB3 PRO B 79 SER B 85 5 7 HELIX 13 AB4 ILE B 88 SER B 100 1 13 HELIX 14 AB5 ASN B 103 ALA B 107 5 5 HELIX 15 AB6 TRP B 108 CYS B 115 1 8 HELIX 16 AB7 ASP B 119 ARG B 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SHEET 1 AA2 3 THR B 43 ARG B 45 0 SHEET 2 AA2 3 THR B 51 TYR B 53 -1 O ASP B 52 N ASN B 44 SHEET 3 AA2 3 ILE B 58 ASN B 59 -1 O ILE B 58 N TYR B 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.02 SSBOND 5 CYS B 6 CYS B 127 1555 1555 2.03 SSBOND 6 CYS B 30 CYS B 115 1555 1555 2.02 SSBOND 7 CYS B 64 CYS B 80 1555 1555 2.03 SSBOND 8 CYS B 76 CYS B 94 1555 1555 2.03 LINK NH2 ARG A 5 RE3 QEB A 213 1555 1555 2.74 LINK NE2 HIS A 15 RE1 RRE A 218 1555 1555 2.45 LINK OD1 ASP A 18 RE RE A 209 1555 1555 2.17 LINK OD2 ASP A 52 RE RE A 210 1555 1555 2.09 LINK O SER A 60 NA NA A 205 1555 1555 2.33 LINK NH2 ARG A 61 RE4 QEB A 215 1555 1555 2.46 LINK NH1 ARG A 61 RE2 QEB A 216 1555 1555 2.57 LINK O CYS A 64 NA NA A 205 1555 1555 2.39 LINK OG SER A 72 NA NA A 205 1555 1555 2.41 LINK O ARG A 73 NA NA A 205 1555 1555 2.60 LINK OD2 ASP A 119 RE RE A 208 1555 1555 2.35 LINK NH2 ARG A 125 RE RE A 208 1555 1555 2.47 LINK O LEU A 129 RE RE A 211 1555 1555 2.72 LINK NA NA A 205 O HOH A 315 1555 1555 2.64 LINK NA NA A 205 O HOH A 316 1555 1555 2.29 LINK RE RE A 207 O HOH A 304 1555 1555 2.50 LINK RE RE A 208 O HOH A 317 1555 1555 2.40 LINK RE RE A 209 O HOH A 324 1555 1555 2.70 LINK RE RE A 209 O HOH A 325 1555 1555 2.13 LINK RE3 QEB A 213 O HOH A 321 1555 1555 2.56 LINK RE1 QEB A 214 O HOH A 323 1555 1555 2.80 LINK RE4 QEB A 215 O HOH A 301 1555 1555 2.59 LINK RE2 QEB A 215 O HOH B 303 1555 4577 2.58 LINK RE2 QEB A 215 O HOH B 318 1555 4577 2.58 LINK NE2 HIS B 15 RE1 RRE B 210 1555 1555 2.56 LINK OD2 ASP B 52 RE RE B 204 1555 1555 2.13 LINK O SER B 60 NA NA B 207 1555 1555 2.37 LINK O CYS B 64 NA NA B 207 1555 1555 2.19 LINK OG SER B 72 NA NA B 207 1555 1555 2.56 LINK O ARG B 73 NA NA B 207 1555 1555 2.46 LINK OD2 ASP B 119 RE RE B 202 1555 1555 2.32 LINK O LEU B 129 RE RE B 201 1555 1555 2.11 LINK RE RE B 208 O ACT B 211 1555 1555 2.63 SITE 1 AC1 2 RE A 202 RRE B 210 SITE 1 AC2 2 RE A 201 RRE B 210 SITE 1 AC3 2 TYR A 23 ASN B 113 SITE 1 AC4 3 ASN A 65 THR A 69 HOH A 315 SITE 1 AC5 6 SER A 60 CYS A 64 SER A 72 ARG A 73 SITE 2 AC5 6 HOH A 315 HOH A 316 SITE 1 AC6 5 ILE A 58 ASN A 59 TRP A 63 ALA A 107 SITE 2 AC6 5 TRP A 108 SITE 1 AC7 2 GLU A 35 HOH A 304 SITE 1 AC8 3 ASP A 119 ARG A 125 HOH A 317 SITE 1 AC9 3 ASP A 18 HOH A 324 HOH A 325 SITE 1 AD1 2 ASN A 46 ASP A 52 SITE 1 AD2 2 LEU A 129 QEB A 212 SITE 1 AD3 4 LEU A 129 RE A 211 ASP B 48 PRO B 70 SITE 1 AD4 3 ARG A 5 TRP A 123 HOH A 321 SITE 1 AD5 1 HOH A 323 SITE 1 AD6 7 ARG A 61 GLY A 71 HOH A 301 HOH A 305 SITE 2 AD6 7 ASP B 18 HOH B 303 HOH B 318 SITE 1 AD7 4 ASP A 48 ARG A 61 THR A 69 PRO A 70 SITE 1 AD8 6 ALA A 11 ARG A 14 HIS A 15 ASP A 87 SITE 2 AD8 6 ILE A 88 THR A 89 SITE 1 AD9 1 LEU B 129 SITE 1 AE1 2 ASN A 103 ASP B 119 SITE 1 AE2 2 HOH B 323 HOH B 324 SITE 1 AE3 1 ASP B 52 SITE 1 AE4 3 ASN A 113 ARG B 21 TYR B 23 SITE 1 AE5 4 ASN B 65 GLY B 67 ARG B 68 THR B 69 SITE 1 AE6 4 SER B 60 CYS B 64 SER B 72 ARG B 73 SITE 1 AE7 1 ACT B 211 SITE 1 AE8 7 RE A 201 RE A 202 ALA B 11 HIS B 15 SITE 2 AE8 7 ASP B 87 ILE B 88 THR B 89 SITE 1 AE9 7 GLN B 57 ILE B 58 ASN B 59 TRP B 63 SITE 2 AE9 7 ALA B 107 TRP B 108 RE B 208 CRYST1 37.880 78.650 80.670 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026399 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012396 0.00000