HEADER HYDROLASE 13-MAY-19 6RP4 TITLE CDT OF SIDD, DEAMPYLASE FROM LEGIONELLA PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE MONOPHOSPHATE-PROTEIN HYDROLASE SIDD; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: SIDD; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: C3927_12395; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEGIONELLA PNEUMPHILA EFFECTOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.TASCON,M.LUCAS,A.L.ROJAS,A.HIERRO REVDAT 2 15-MAY-24 6RP4 1 REMARK REVDAT 1 07-OCT-20 6RP4 0 JRNL AUTH I.TASCON,X.LI,M.LUCAS,D.NELSON,A.VIDAURRAZAGA,Y.H.LIN, JRNL AUTH 2 A.L.ROJAS,A.HIERRO,M.P.MACHNER JRNL TITL STRUCTURAL INSIGHT INTO THE MEMBRANE TARGETING DOMAIN OF THE JRNL TITL 2 LEGIONELLA DEAMPYLASE SIDD. JRNL REF PLOS PATHOG. V. 16 08734 2020 JRNL REFN ESSN 1553-7374 JRNL PMID 32853279 JRNL DOI 10.1371/JOURNAL.PPAT.1008734 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 50.120 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37398 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.272 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.0173 - 5.9892 0.95 2610 142 0.2229 0.2741 REMARK 3 2 5.9892 - 4.7697 0.95 2556 146 0.2484 0.3001 REMARK 3 3 4.7697 - 4.1714 0.95 2538 145 0.2283 0.2550 REMARK 3 4 4.1714 - 3.7921 0.95 2533 143 0.2603 0.2779 REMARK 3 5 3.7921 - 3.5215 0.95 2538 126 0.2777 0.2834 REMARK 3 6 3.5215 - 3.3146 0.95 2499 138 0.2815 0.3105 REMARK 3 7 3.3146 - 3.1491 0.94 2507 163 0.3046 0.3543 REMARK 3 8 3.1491 - 3.0124 0.94 2522 147 0.3183 0.3555 REMARK 3 9 3.0124 - 2.8967 0.95 2510 125 0.3255 0.3320 REMARK 3 10 2.8967 - 2.7969 0.95 2510 138 0.3328 0.3990 REMARK 3 11 2.7969 - 2.7096 0.95 2522 138 0.3402 0.4180 REMARK 3 12 2.7096 - 2.6323 0.95 2502 122 0.3513 0.3683 REMARK 3 13 2.6323 - 2.5631 0.94 2479 138 0.3578 0.3879 REMARK 3 14 2.5631 - 2.5007 0.95 2564 125 0.3558 0.4058 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: H,-H-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933400 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37987 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 47.799 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.38 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 11.36 REMARK 200 R MERGE FOR SHELL (I) : 1.91200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M NACL, 0.1M SODIUM ACETATE (PH REMARK 280 4.6) AND 20% GLYCEROL., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.35600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 34.35600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.35600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -222.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 350 REMARK 465 ILE A 351 REMARK 465 GLY A 352 REMARK 465 VAL A 353 REMARK 465 SER A 354 REMARK 465 ASP A 355 REMARK 465 GLY A 356 REMARK 465 LEU A 357 REMARK 465 LEU A 358 REMARK 465 SER A 359 REMARK 465 TYR A 360 REMARK 465 ILE A 361 REMARK 465 LYS A 362 REMARK 465 ASN A 363 REMARK 465 GLU A 364 REMARK 465 ASN A 365 REMARK 465 GLU A 366 REMARK 465 ASN A 367 REMARK 465 LYS A 368 REMARK 465 TYR A 374 REMARK 465 GLY A 375 REMARK 465 LYS A 496 REMARK 465 ILE A 497 REMARK 465 LYS A 498 REMARK 465 ALA A 499 REMARK 465 ALA A 500 REMARK 465 THR A 501 REMARK 465 ASN A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 LEU A 505 REMARK 465 THR A 506 REMARK 465 ILE A 507 REMARK 465 SER B 350 REMARK 465 ILE B 351 REMARK 465 GLY B 352 REMARK 465 VAL B 353 REMARK 465 SER B 354 REMARK 465 ASP B 355 REMARK 465 GLY B 356 REMARK 465 LEU B 357 REMARK 465 LEU B 358 REMARK 465 SER B 359 REMARK 465 TYR B 360 REMARK 465 ILE B 361 REMARK 465 LYS B 362 REMARK 465 ASN B 363 REMARK 465 GLU B 364 REMARK 465 ASN B 365 REMARK 465 GLU B 366 REMARK 465 ASN B 367 REMARK 465 ASP B 495 REMARK 465 LYS B 496 REMARK 465 ILE B 497 REMARK 465 LYS B 498 REMARK 465 ALA B 499 REMARK 465 ALA B 500 REMARK 465 THR B 501 REMARK 465 ASN B 502 REMARK 465 SER B 503 REMARK 465 SER B 504 REMARK 465 LEU B 505 REMARK 465 THR B 506 REMARK 465 ILE B 507 REMARK 465 SER C 350 REMARK 465 ILE C 351 REMARK 465 GLY C 352 REMARK 465 VAL C 353 REMARK 465 SER C 354 REMARK 465 ASP C 355 REMARK 465 GLY C 356 REMARK 465 LEU C 357 REMARK 465 LEU C 358 REMARK 465 SER C 359 REMARK 465 TYR C 360 REMARK 465 ILE C 361 REMARK 465 LYS C 362 REMARK 465 ASN C 363 REMARK 465 GLU C 364 REMARK 465 ASN C 365 REMARK 465 GLU C 366 REMARK 465 ASN C 367 REMARK 465 LYS C 368 REMARK 465 TYR C 374 REMARK 465 GLY C 375 REMARK 465 ASP C 495 REMARK 465 LYS C 496 REMARK 465 ILE C 497 REMARK 465 LYS C 498 REMARK 465 ALA C 499 REMARK 465 ALA C 500 REMARK 465 THR C 501 REMARK 465 ASN C 502 REMARK 465 SER C 503 REMARK 465 SER C 504 REMARK 465 LEU C 505 REMARK 465 THR C 506 REMARK 465 ILE C 507 REMARK 465 SER D 350 REMARK 465 ILE D 351 REMARK 465 GLY D 352 REMARK 465 VAL D 353 REMARK 465 SER D 354 REMARK 465 ASP D 355 REMARK 465 GLY D 356 REMARK 465 LEU D 357 REMARK 465 LEU D 358 REMARK 465 SER D 359 REMARK 465 TYR D 360 REMARK 465 ILE D 361 REMARK 465 LYS D 362 REMARK 465 ASN D 363 REMARK 465 GLU D 364 REMARK 465 ASN D 365 REMARK 465 GLU D 366 REMARK 465 ASN D 367 REMARK 465 LYS D 496 REMARK 465 ILE D 497 REMARK 465 LYS D 498 REMARK 465 ALA D 499 REMARK 465 ALA D 500 REMARK 465 THR D 501 REMARK 465 ASN D 502 REMARK 465 SER D 503 REMARK 465 SER D 504 REMARK 465 LEU D 505 REMARK 465 THR D 506 REMARK 465 ILE D 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 378 -69.80 -103.85 REMARK 500 ASN A 383 -152.66 -95.44 REMARK 500 ILE A 384 -160.14 -79.79 REMARK 500 GLU A 385 -46.42 -28.89 REMARK 500 GLU A 449 51.40 -93.23 REMARK 500 ASP A 452 -44.60 -149.78 REMARK 500 ALA B 380 -161.62 -162.24 REMARK 500 ASN B 383 74.82 51.25 REMARK 500 ASP B 452 -57.90 -131.75 REMARK 500 ASN B 479 82.65 -152.77 REMARK 500 LEU C 457 -72.94 -35.65 REMARK 500 TYR D 374 160.16 176.75 REMARK 500 PHE D 376 45.89 24.81 REMARK 500 ALA D 380 -89.82 -26.27 REMARK 500 ASP D 381 -128.94 -136.23 REMARK 500 LYS D 382 178.61 -56.46 REMARK 500 ASN D 383 57.01 74.14 REMARK 500 TYR D 397 30.97 -91.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 411 O REMARK 620 2 VAL A 412 O 83.7 REMARK 620 3 ASP A 414 O 101.0 108.8 REMARK 620 4 THR A 417 OG1 63.4 146.9 82.8 REMARK 620 5 THR A 421 OG1 89.7 98.6 151.4 78.5 REMARK 620 6 HOH A 718 O 170.8 95.1 88.0 116.7 81.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 411 O REMARK 620 2 VAL B 412 O 74.9 REMARK 620 3 ASP B 414 O 88.0 85.4 REMARK 620 4 THR B 417 OG1 65.3 140.1 91.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL C 412 O REMARK 620 2 ASP C 414 O 80.1 REMARK 620 3 THR C 417 O 137.0 93.7 REMARK 620 4 THR C 421 OG1 86.5 120.1 59.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU D 411 O REMARK 620 2 VAL D 412 O 83.2 REMARK 620 3 ASP D 414 O 99.7 113.7 REMARK 620 4 THR D 417 OG1 57.2 140.2 80.5 REMARK 620 5 THR D 421 OG1 85.4 101.1 145.2 73.5 REMARK 620 6 HOH D 717 O 169.9 104.5 83.3 114.3 86.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 603 DBREF 6RP4 A 350 507 UNP Q6RCR2 Q6RCR2_LEGPN 350 507 DBREF 6RP4 B 350 507 UNP Q6RCR2 Q6RCR2_LEGPN 350 507 DBREF 6RP4 C 350 507 UNP Q6RCR2 Q6RCR2_LEGPN 350 507 DBREF 6RP4 D 350 507 UNP Q6RCR2 Q6RCR2_LEGPN 350 507 SEQRES 1 A 158 SER ILE GLY VAL SER ASP GLY LEU LEU SER TYR ILE LYS SEQRES 2 A 158 ASN GLU ASN GLU ASN LYS GLY PHE LEU GLY ILE TYR GLY SEQRES 3 A 158 PHE PHE THR GLY ALA ASP LYS ASN ILE GLU LYS ALA THR SEQRES 4 A 158 LEU TYR LYS ASN LEU ILE ALA LYS TYR GLN ASN ASN HIS SEQRES 5 A 158 PHE ILE SER LEU ILE ILE LEU SER ALA LEU VAL SER ASP SEQRES 6 A 158 SER LYS THR PRO LEU MET THR GLN TYR LEU VAL GLY TYR SEQRES 7 A 158 LEU ASP PHE PRO SER LYS ALA LEU LEU ALA ASN LYS ILE SEQRES 8 A 158 THR GLU LEU LEU LEU LYS GLU LEU GLU ASN PRO ASP MET SEQRES 9 A 158 ARG GLU ILE LEU GLY SER ARG LEU ALA THR ASP VAL ILE SEQRES 10 A 158 GLU GLU LEU GLU THR LYS ILE ILE ARG TYR ILE HIS ASN SEQRES 11 A 158 PRO ALA GLY SER ASP ILE HIS SER THR LEU ASN LEU TRP SEQRES 12 A 158 THR ALA ASP LYS ILE LYS ALA ALA THR ASN SER SER LEU SEQRES 13 A 158 THR ILE SEQRES 1 B 158 SER ILE GLY VAL SER ASP GLY LEU LEU SER TYR ILE LYS SEQRES 2 B 158 ASN GLU ASN GLU ASN LYS GLY PHE LEU GLY ILE TYR GLY SEQRES 3 B 158 PHE PHE THR GLY ALA ASP LYS ASN ILE GLU LYS ALA THR SEQRES 4 B 158 LEU TYR LYS ASN LEU ILE ALA LYS TYR GLN ASN ASN HIS SEQRES 5 B 158 PHE ILE SER LEU ILE ILE LEU SER ALA LEU VAL SER ASP SEQRES 6 B 158 SER LYS THR PRO LEU MET THR GLN TYR LEU VAL GLY TYR SEQRES 7 B 158 LEU ASP PHE PRO SER LYS ALA LEU LEU ALA ASN LYS ILE SEQRES 8 B 158 THR GLU LEU LEU LEU LYS GLU LEU GLU ASN PRO ASP MET SEQRES 9 B 158 ARG GLU ILE LEU GLY SER ARG LEU ALA THR ASP VAL ILE SEQRES 10 B 158 GLU GLU LEU GLU THR LYS ILE ILE ARG TYR ILE HIS ASN SEQRES 11 B 158 PRO ALA GLY SER ASP ILE HIS SER THR LEU ASN LEU TRP SEQRES 12 B 158 THR ALA ASP LYS ILE LYS ALA ALA THR ASN SER SER LEU SEQRES 13 B 158 THR ILE SEQRES 1 C 158 SER ILE GLY VAL SER ASP GLY LEU LEU SER TYR ILE LYS SEQRES 2 C 158 ASN GLU ASN GLU ASN LYS GLY PHE LEU GLY ILE TYR GLY SEQRES 3 C 158 PHE PHE THR GLY ALA ASP LYS ASN ILE GLU LYS ALA THR SEQRES 4 C 158 LEU TYR LYS ASN LEU ILE ALA LYS TYR GLN ASN ASN HIS SEQRES 5 C 158 PHE ILE SER LEU ILE ILE LEU SER ALA LEU VAL SER ASP SEQRES 6 C 158 SER LYS THR PRO LEU MET THR GLN TYR LEU VAL GLY TYR SEQRES 7 C 158 LEU ASP PHE PRO SER LYS ALA LEU LEU ALA ASN LYS ILE SEQRES 8 C 158 THR GLU LEU LEU LEU LYS GLU LEU GLU ASN PRO ASP MET SEQRES 9 C 158 ARG GLU ILE LEU GLY SER ARG LEU ALA THR ASP VAL ILE SEQRES 10 C 158 GLU GLU LEU GLU THR LYS ILE ILE ARG TYR ILE HIS ASN SEQRES 11 C 158 PRO ALA GLY SER ASP ILE HIS SER THR LEU ASN LEU TRP SEQRES 12 C 158 THR ALA ASP LYS ILE LYS ALA ALA THR ASN SER SER LEU SEQRES 13 C 158 THR ILE SEQRES 1 D 158 SER ILE GLY VAL SER ASP GLY LEU LEU SER TYR ILE LYS SEQRES 2 D 158 ASN GLU ASN GLU ASN LYS GLY PHE LEU GLY ILE TYR GLY SEQRES 3 D 158 PHE PHE THR GLY ALA ASP LYS ASN ILE GLU LYS ALA THR SEQRES 4 D 158 LEU TYR LYS ASN LEU ILE ALA LYS TYR GLN ASN ASN HIS SEQRES 5 D 158 PHE ILE SER LEU ILE ILE LEU SER ALA LEU VAL SER ASP SEQRES 6 D 158 SER LYS THR PRO LEU MET THR GLN TYR LEU VAL GLY TYR SEQRES 7 D 158 LEU ASP PHE PRO SER LYS ALA LEU LEU ALA ASN LYS ILE SEQRES 8 D 158 THR GLU LEU LEU LEU LYS GLU LEU GLU ASN PRO ASP MET SEQRES 9 D 158 ARG GLU ILE LEU GLY SER ARG LEU ALA THR ASP VAL ILE SEQRES 10 D 158 GLU GLU LEU GLU THR LYS ILE ILE ARG TYR ILE HIS ASN SEQRES 11 D 158 PRO ALA GLY SER ASP ILE HIS SER THR LEU ASN LEU TRP SEQRES 12 D 158 THR ALA ASP LYS ILE LYS ALA ALA THR ASN SER SER LEU SEQRES 13 D 158 THR ILE HET ZN A 601 1 HET GOL A 602 6 HET MG A 603 1 HET NA A 604 1 HET NA A 605 1 HET NA A 606 1 HET ZN B 601 1 HET GOL B 602 6 HET GOL B 603 6 HET MG B 604 1 HET ZN C 601 1 HET MG C 602 1 HET ZN D 601 1 HET GOL D 602 6 HET MG D 603 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN 4(ZN 2+) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 7 MG 4(MG 2+) FORMUL 8 NA 3(NA 1+) FORMUL 20 HOH *58(H2 O) HELIX 1 AA1 ILE A 384 TYR A 397 1 14 HELIX 2 AA2 ASN A 400 ASP A 414 1 15 HELIX 3 AA3 THR A 417 LEU A 428 1 12 HELIX 4 AA4 SER A 432 LEU A 448 1 17 HELIX 5 AA5 MET A 453 GLY A 458 1 6 HELIX 6 AA6 LEU A 461 ASN A 479 1 19 HELIX 7 AA7 PRO A 480 SER A 483 5 4 HELIX 8 AA8 ASP A 484 ASN A 490 1 7 HELIX 9 AA9 LEU A 491 THR A 493 5 3 HELIX 10 AB1 ASN B 383 TYR B 397 1 15 HELIX 11 AB2 ASN B 400 ASP B 414 1 15 HELIX 12 AB3 THR B 417 LEU B 428 1 12 HELIX 13 AB4 SER B 432 GLU B 449 1 18 HELIX 14 AB5 LEU B 461 ASN B 479 1 19 HELIX 15 AB6 ASP B 484 ASN B 490 1 7 HELIX 16 AB7 GLU C 385 TYR C 397 1 13 HELIX 17 AB8 ASN C 400 ASP C 414 1 15 HELIX 18 AB9 THR C 417 LEU C 428 1 12 HELIX 19 AC1 SER C 432 LEU C 448 1 17 HELIX 20 AC2 ASP C 452 GLY C 458 1 7 HELIX 21 AC3 LEU C 461 ASN C 479 1 19 HELIX 22 AC4 ILE C 485 ASN C 490 1 6 HELIX 23 AC5 LEU C 491 THR C 493 5 3 HELIX 24 AC6 ASN D 383 TYR D 397 1 15 HELIX 25 AC7 ASN D 400 ASP D 414 1 15 HELIX 26 AC8 THR D 417 LEU D 428 1 12 HELIX 27 AC9 SER D 432 ASN D 450 1 19 HELIX 28 AD1 MET D 453 GLY D 458 1 6 HELIX 29 AD2 LEU D 461 ASN D 479 1 19 HELIX 30 AD3 PRO D 480 SER D 483 5 4 HELIX 31 AD4 ASP D 484 ASN D 490 1 7 HELIX 32 AD5 LEU D 491 THR D 493 5 3 LINK O LEU A 411 MG MG A 603 1555 1555 2.46 LINK O VAL A 412 MG MG A 603 1555 1555 2.66 LINK O ASP A 414 MG MG A 603 1555 1555 2.08 LINK OG1 THR A 417 MG MG A 603 1555 1555 2.65 LINK OG1 THR A 421 MG MG A 603 1555 1555 2.55 LINK MG MG A 603 O HOH A 718 1555 1555 2.52 LINK NA NA A 606 O HOH A 716 1555 1555 2.71 LINK O LEU B 411 MG MG B 604 1555 1555 2.69 LINK O VAL B 412 MG MG B 604 1555 1555 2.89 LINK O ASP B 414 MG MG B 604 1555 1555 2.19 LINK OG1 THR B 417 MG MG B 604 1555 1555 2.75 LINK O VAL C 412 MG MG C 602 1555 1555 2.86 LINK O ASP C 414 MG MG C 602 1555 1555 2.60 LINK O THR C 417 MG MG C 602 1555 1555 2.99 LINK OG1 THR C 421 MG MG C 602 1555 1555 2.56 LINK O LEU D 411 MG MG D 603 1555 1555 2.65 LINK O VAL D 412 MG MG D 603 1555 1555 2.37 LINK O ASP D 414 MG MG D 603 1555 1555 2.13 LINK OG1 THR D 417 MG MG D 603 1555 1555 2.80 LINK OG1 THR D 421 MG MG D 603 1555 1555 2.62 LINK MG MG D 603 O HOH D 717 1555 1555 2.69 SITE 1 AC1 4 THR A 417 PRO A 418 LEU A 419 MET A 420 SITE 1 AC2 3 GLY A 482 HOH A 712 ASP D 484 SITE 1 AC3 6 LEU A 411 VAL A 412 ASP A 414 THR A 417 SITE 2 AC3 6 THR A 421 HOH A 718 SITE 1 AC4 4 ASN A 392 LEU A 393 HIS A 486 ALA D 481 SITE 1 AC5 2 LEU A 389 ASN A 392 SITE 1 AC6 4 ALA A 481 HOH A 716 ASN D 392 HIS D 486 SITE 1 AC7 4 LYS B 382 THR B 417 LEU B 419 MET B 420 SITE 1 AC8 3 SER B 413 THR B 441 HOH B 710 SITE 1 AC9 5 PHE B 370 ASP B 429 PHE B 430 PRO B 431 SITE 2 AC9 5 LEU B 435 SITE 1 AD1 5 LEU B 411 VAL B 412 ASP B 414 THR B 417 SITE 2 AD1 5 THR B 421 SITE 1 AD2 3 THR C 417 LEU C 419 MET C 420 SITE 1 AD3 5 VAL C 412 ASP C 414 THR C 417 THR C 421 SITE 2 AD3 5 LYS C 433 SITE 1 AD4 4 LYS D 382 THR D 417 LEU D 419 MET D 420 SITE 1 AD5 4 GLY D 379 ILE D 384 THR D 388 LYS D 391 SITE 1 AD6 6 LEU D 411 VAL D 412 ASP D 414 THR D 417 SITE 2 AD6 6 THR D 421 HOH D 717 CRYST1 165.579 165.579 68.712 90.00 90.00 120.00 P 63 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006039 0.003487 0.000000 0.00000 SCALE2 0.000000 0.006974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014553 0.00000