data_6RPO # _entry.id 6RPO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6RPO pdb_00006rpo 10.2210/pdb6rpo/pdb WWPDB D_1292102337 ? ? EMDB EMD-4979 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-11-25 2 'Structure model' 1 1 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_oper_list.name' 4 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6RPO _pdbx_database_status.recvd_initial_deposition_date 2019-05-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'bat circovirus without DNA VLP' _pdbx_database_related.db_id EMD-4979 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Forwood, J.K.' 1 0000-0003-3267-9997 'Luque, D.' 2 0000-0002-0151-6020 'Mata, C.P.' 3 0000-0003-3381-7431 'Das, S.' 4 0000-0003-0795-2752 'Raidal, S.' 5 0000-0001-7917-8976 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'bat circovirus without DNA VLP' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Forwood, J.K.' 1 0000-0003-3267-9997 primary 'Luque, D.' 2 0000-0002-0151-6020 primary 'Mata, C.P.' 3 0000-0003-3381-7431 primary 'Das, S.' 4 0000-0003-0795-2752 primary 'Raidal, S.' 5 0000-0001-7917-8976 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'bat circovirus capsid protein' _entity.formula_weight 27754.744 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVYRRRRGRGRRARPMSSLGRLLYRKPWLMHPRFRARYRWRRKNGITNLRLTRQVELWVPKDAANASFYVNHYTFDLDDF IPAGTQLNSSPLPFKYYRIRKVKVEFQPRLPITSPFRGYGSTVPILDGAFVTPATGESDPIWDPYINFSGRHVIRTPAWY HKRYFTPKPLIDGNTGFFQPNNKQNALWFPNKQGQNIQWSGLGFAMQKGNEAYNYQVRFTLYVQFREFDLFNN ; _entity_poly.pdbx_seq_one_letter_code_can ;MVYRRRRGRGRRARPMSSLGRLLYRKPWLMHPRFRARYRWRRKNGITNLRLTRQVELWVPKDAANASFYVNHYTFDLDDF IPAGTQLNSSPLPFKYYRIRKVKVEFQPRLPITSPFRGYGSTVPILDGAFVTPATGESDPIWDPYINFSGRHVIRTPAWY HKRYFTPKPLIDGNTGFFQPNNKQNALWFPNKQGQNIQWSGLGFAMQKGNEAYNYQVRFTLYVQFREFDLFNN ; _entity_poly.pdbx_strand_id u _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 TYR n 1 4 ARG n 1 5 ARG n 1 6 ARG n 1 7 ARG n 1 8 GLY n 1 9 ARG n 1 10 GLY n 1 11 ARG n 1 12 ARG n 1 13 ALA n 1 14 ARG n 1 15 PRO n 1 16 MET n 1 17 SER n 1 18 SER n 1 19 LEU n 1 20 GLY n 1 21 ARG n 1 22 LEU n 1 23 LEU n 1 24 TYR n 1 25 ARG n 1 26 LYS n 1 27 PRO n 1 28 TRP n 1 29 LEU n 1 30 MET n 1 31 HIS n 1 32 PRO n 1 33 ARG n 1 34 PHE n 1 35 ARG n 1 36 ALA n 1 37 ARG n 1 38 TYR n 1 39 ARG n 1 40 TRP n 1 41 ARG n 1 42 ARG n 1 43 LYS n 1 44 ASN n 1 45 GLY n 1 46 ILE n 1 47 THR n 1 48 ASN n 1 49 LEU n 1 50 ARG n 1 51 LEU n 1 52 THR n 1 53 ARG n 1 54 GLN n 1 55 VAL n 1 56 GLU n 1 57 LEU n 1 58 TRP n 1 59 VAL n 1 60 PRO n 1 61 LYS n 1 62 ASP n 1 63 ALA n 1 64 ALA n 1 65 ASN n 1 66 ALA n 1 67 SER n 1 68 PHE n 1 69 TYR n 1 70 VAL n 1 71 ASN n 1 72 HIS n 1 73 TYR n 1 74 THR n 1 75 PHE n 1 76 ASP n 1 77 LEU n 1 78 ASP n 1 79 ASP n 1 80 PHE n 1 81 ILE n 1 82 PRO n 1 83 ALA n 1 84 GLY n 1 85 THR n 1 86 GLN n 1 87 LEU n 1 88 ASN n 1 89 SER n 1 90 SER n 1 91 PRO n 1 92 LEU n 1 93 PRO n 1 94 PHE n 1 95 LYS n 1 96 TYR n 1 97 TYR n 1 98 ARG n 1 99 ILE n 1 100 ARG n 1 101 LYS n 1 102 VAL n 1 103 LYS n 1 104 VAL n 1 105 GLU n 1 106 PHE n 1 107 GLN n 1 108 PRO n 1 109 ARG n 1 110 LEU n 1 111 PRO n 1 112 ILE n 1 113 THR n 1 114 SER n 1 115 PRO n 1 116 PHE n 1 117 ARG n 1 118 GLY n 1 119 TYR n 1 120 GLY n 1 121 SER n 1 122 THR n 1 123 VAL n 1 124 PRO n 1 125 ILE n 1 126 LEU n 1 127 ASP n 1 128 GLY n 1 129 ALA n 1 130 PHE n 1 131 VAL n 1 132 THR n 1 133 PRO n 1 134 ALA n 1 135 THR n 1 136 GLY n 1 137 GLU n 1 138 SER n 1 139 ASP n 1 140 PRO n 1 141 ILE n 1 142 TRP n 1 143 ASP n 1 144 PRO n 1 145 TYR n 1 146 ILE n 1 147 ASN n 1 148 PHE n 1 149 SER n 1 150 GLY n 1 151 ARG n 1 152 HIS n 1 153 VAL n 1 154 ILE n 1 155 ARG n 1 156 THR n 1 157 PRO n 1 158 ALA n 1 159 TRP n 1 160 TYR n 1 161 HIS n 1 162 LYS n 1 163 ARG n 1 164 TYR n 1 165 PHE n 1 166 THR n 1 167 PRO n 1 168 LYS n 1 169 PRO n 1 170 LEU n 1 171 ILE n 1 172 ASP n 1 173 GLY n 1 174 ASN n 1 175 THR n 1 176 GLY n 1 177 PHE n 1 178 PHE n 1 179 GLN n 1 180 PRO n 1 181 ASN n 1 182 ASN n 1 183 LYS n 1 184 GLN n 1 185 ASN n 1 186 ALA n 1 187 LEU n 1 188 TRP n 1 189 PHE n 1 190 PRO n 1 191 ASN n 1 192 LYS n 1 193 GLN n 1 194 GLY n 1 195 GLN n 1 196 ASN n 1 197 ILE n 1 198 GLN n 1 199 TRP n 1 200 SER n 1 201 GLY n 1 202 LEU n 1 203 GLY n 1 204 PHE n 1 205 ALA n 1 206 MET n 1 207 GLN n 1 208 LYS n 1 209 GLY n 1 210 ASN n 1 211 GLU n 1 212 ALA n 1 213 TYR n 1 214 ASN n 1 215 TYR n 1 216 GLN n 1 217 VAL n 1 218 ARG n 1 219 PHE n 1 220 THR n 1 221 LEU n 1 222 TYR n 1 223 VAL n 1 224 GLN n 1 225 PHE n 1 226 ARG n 1 227 GLU n 1 228 PHE n 1 229 ASP n 1 230 LEU n 1 231 PHE n 1 232 ASN n 1 233 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 233 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bat circovirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1329650 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 ? ? ? u . n A 1 2 VAL 2 -1 ? ? ? u . n A 1 3 TYR 3 0 ? ? ? u . n A 1 4 ARG 4 1 ? ? ? u . n A 1 5 ARG 5 2 ? ? ? u . n A 1 6 ARG 6 3 ? ? ? u . n A 1 7 ARG 7 4 ? ? ? u . n A 1 8 GLY 8 5 ? ? ? u . n A 1 9 ARG 9 6 ? ? ? u . n A 1 10 GLY 10 7 ? ? ? u . n A 1 11 ARG 11 8 ? ? ? u . n A 1 12 ARG 12 9 ? ? ? u . n A 1 13 ALA 13 10 ? ? ? u . n A 1 14 ARG 14 11 ? ? ? u . n A 1 15 PRO 15 12 ? ? ? u . n A 1 16 MET 16 13 ? ? ? u . n A 1 17 SER 17 14 ? ? ? u . n A 1 18 SER 18 15 ? ? ? u . n A 1 19 LEU 19 16 ? ? ? u . n A 1 20 GLY 20 17 ? ? ? u . n A 1 21 ARG 21 18 ? ? ? u . n A 1 22 LEU 22 19 ? ? ? u . n A 1 23 LEU 23 20 ? ? ? u . n A 1 24 TYR 24 21 ? ? ? u . n A 1 25 ARG 25 22 ? ? ? u . n A 1 26 LYS 26 23 ? ? ? u . n A 1 27 PRO 27 24 ? ? ? u . n A 1 28 TRP 28 25 ? ? ? u . n A 1 29 LEU 29 26 ? ? ? u . n A 1 30 MET 30 27 ? ? ? u . n A 1 31 HIS 31 28 ? ? ? u . n A 1 32 PRO 32 29 ? ? ? u . n A 1 33 ARG 33 30 30 ARG ARG u . n A 1 34 PHE 34 31 31 PHE PHE u . n A 1 35 ARG 35 32 32 ARG ARG u . n A 1 36 ALA 36 33 33 ALA ALA u . n A 1 37 ARG 37 34 34 ARG ARG u . n A 1 38 TYR 38 35 35 TYR TYR u . n A 1 39 ARG 39 36 36 ARG ARG u . n A 1 40 TRP 40 37 37 TRP TRP u . n A 1 41 ARG 41 38 38 ARG ARG u . n A 1 42 ARG 42 39 39 ARG ARG u . n A 1 43 LYS 43 40 40 LYS LYS u . n A 1 44 ASN 44 41 41 ASN ASN u . n A 1 45 GLY 45 42 42 GLY GLY u . n A 1 46 ILE 46 43 43 ILE ILE u . n A 1 47 THR 47 44 44 THR THR u . n A 1 48 ASN 48 45 45 ASN ASN u . n A 1 49 LEU 49 46 46 LEU LEU u . n A 1 50 ARG 50 47 47 ARG ARG u . n A 1 51 LEU 51 48 48 LEU LEU u . n A 1 52 THR 52 49 49 THR THR u . n A 1 53 ARG 53 50 50 ARG ARG u . n A 1 54 GLN 54 51 51 GLN GLN u . n A 1 55 VAL 55 52 52 VAL VAL u . n A 1 56 GLU 56 53 53 GLU GLU u . n A 1 57 LEU 57 54 54 LEU LEU u . n A 1 58 TRP 58 55 55 TRP TRP u . n A 1 59 VAL 59 56 56 VAL VAL u . n A 1 60 PRO 60 57 57 PRO PRO u . n A 1 61 LYS 61 58 58 LYS LYS u . n A 1 62 ASP 62 59 59 ASP ASP u . n A 1 63 ALA 63 60 60 ALA ALA u . n A 1 64 ALA 64 61 61 ALA ALA u . n A 1 65 ASN 65 62 62 ASN ASN u . n A 1 66 ALA 66 63 63 ALA ALA u . n A 1 67 SER 67 64 64 SER SER u . n A 1 68 PHE 68 65 65 PHE PHE u . n A 1 69 TYR 69 66 66 TYR TYR u . n A 1 70 VAL 70 67 67 VAL VAL u . n A 1 71 ASN 71 68 68 ASN ASN u . n A 1 72 HIS 72 69 69 HIS HIS u . n A 1 73 TYR 73 70 70 TYR TYR u . n A 1 74 THR 74 71 71 THR THR u . n A 1 75 PHE 75 72 72 PHE PHE u . n A 1 76 ASP 76 73 73 ASP ASP u . n A 1 77 LEU 77 74 74 LEU LEU u . n A 1 78 ASP 78 75 75 ASP ASP u . n A 1 79 ASP 79 76 76 ASP ASP u . n A 1 80 PHE 80 77 77 PHE PHE u . n A 1 81 ILE 81 78 78 ILE ILE u . n A 1 82 PRO 82 79 79 PRO PRO u . n A 1 83 ALA 83 80 80 ALA ALA u . n A 1 84 GLY 84 81 81 GLY GLY u . n A 1 85 THR 85 82 82 THR THR u . n A 1 86 GLN 86 83 83 GLN GLN u . n A 1 87 LEU 87 84 84 LEU LEU u . n A 1 88 ASN 88 85 85 ASN ASN u . n A 1 89 SER 89 86 86 SER SER u . n A 1 90 SER 90 87 87 SER SER u . n A 1 91 PRO 91 88 88 PRO PRO u . n A 1 92 LEU 92 89 89 LEU LEU u . n A 1 93 PRO 93 90 90 PRO PRO u . n A 1 94 PHE 94 91 91 PHE PHE u . n A 1 95 LYS 95 92 92 LYS LYS u . n A 1 96 TYR 96 93 93 TYR TYR u . n A 1 97 TYR 97 94 94 TYR TYR u . n A 1 98 ARG 98 95 95 ARG ARG u . n A 1 99 ILE 99 96 96 ILE ILE u . n A 1 100 ARG 100 97 97 ARG ARG u . n A 1 101 LYS 101 98 98 LYS LYS u . n A 1 102 VAL 102 99 99 VAL VAL u . n A 1 103 LYS 103 100 100 LYS LYS u . n A 1 104 VAL 104 101 101 VAL VAL u . n A 1 105 GLU 105 102 102 GLU GLU u . n A 1 106 PHE 106 103 103 PHE PHE u . n A 1 107 GLN 107 104 104 GLN GLN u . n A 1 108 PRO 108 105 105 PRO PRO u . n A 1 109 ARG 109 106 106 ARG ARG u . n A 1 110 LEU 110 107 107 LEU LEU u . n A 1 111 PRO 111 108 108 PRO PRO u . n A 1 112 ILE 112 109 109 ILE ILE u . n A 1 113 THR 113 110 110 THR THR u . n A 1 114 SER 114 111 111 SER SER u . n A 1 115 PRO 115 112 112 PRO PRO u . n A 1 116 PHE 116 113 113 PHE PHE u . n A 1 117 ARG 117 114 114 ARG ARG u . n A 1 118 GLY 118 115 115 GLY GLY u . n A 1 119 TYR 119 116 116 TYR TYR u . n A 1 120 GLY 120 117 117 GLY GLY u . n A 1 121 SER 121 118 118 SER SER u . n A 1 122 THR 122 119 119 THR THR u . n A 1 123 VAL 123 120 120 VAL VAL u . n A 1 124 PRO 124 121 121 PRO PRO u . n A 1 125 ILE 125 122 122 ILE ILE u . n A 1 126 LEU 126 123 123 LEU LEU u . n A 1 127 ASP 127 124 124 ASP ASP u . n A 1 128 GLY 128 125 125 GLY GLY u . n A 1 129 ALA 129 126 126 ALA ALA u . n A 1 130 PHE 130 127 127 PHE PHE u . n A 1 131 VAL 131 128 128 VAL VAL u . n A 1 132 THR 132 129 129 THR THR u . n A 1 133 PRO 133 130 130 PRO PRO u . n A 1 134 ALA 134 131 131 ALA ALA u . n A 1 135 THR 135 132 132 THR THR u . n A 1 136 GLY 136 133 133 GLY GLY u . n A 1 137 GLU 137 134 134 GLU GLU u . n A 1 138 SER 138 135 135 SER SER u . n A 1 139 ASP 139 136 136 ASP ASP u . n A 1 140 PRO 140 137 137 PRO PRO u . n A 1 141 ILE 141 138 138 ILE ILE u . n A 1 142 TRP 142 139 139 TRP TRP u . n A 1 143 ASP 143 140 140 ASP ASP u . n A 1 144 PRO 144 141 141 PRO PRO u . n A 1 145 TYR 145 142 142 TYR TYR u . n A 1 146 ILE 146 143 143 ILE ILE u . n A 1 147 ASN 147 144 144 ASN ASN u . n A 1 148 PHE 148 145 145 PHE PHE u . n A 1 149 SER 149 146 146 SER SER u . n A 1 150 GLY 150 147 147 GLY GLY u . n A 1 151 ARG 151 148 148 ARG ARG u . n A 1 152 HIS 152 149 149 HIS HIS u . n A 1 153 VAL 153 150 150 VAL VAL u . n A 1 154 ILE 154 151 151 ILE ILE u . n A 1 155 ARG 155 152 152 ARG ARG u . n A 1 156 THR 156 153 153 THR THR u . n A 1 157 PRO 157 154 154 PRO PRO u . n A 1 158 ALA 158 155 155 ALA ALA u . n A 1 159 TRP 159 156 156 TRP TRP u . n A 1 160 TYR 160 157 157 TYR TYR u . n A 1 161 HIS 161 158 158 HIS HIS u . n A 1 162 LYS 162 159 159 LYS LYS u . n A 1 163 ARG 163 160 160 ARG ARG u . n A 1 164 TYR 164 161 161 TYR TYR u . n A 1 165 PHE 165 162 162 PHE PHE u . n A 1 166 THR 166 163 163 THR THR u . n A 1 167 PRO 167 164 164 PRO PRO u . n A 1 168 LYS 168 165 165 LYS LYS u . n A 1 169 PRO 169 166 166 PRO PRO u . n A 1 170 LEU 170 167 167 LEU LEU u . n A 1 171 ILE 171 168 168 ILE ILE u . n A 1 172 ASP 172 169 169 ASP ASP u . n A 1 173 GLY 173 170 170 GLY GLY u . n A 1 174 ASN 174 171 171 ASN ASN u . n A 1 175 THR 175 172 172 THR THR u . n A 1 176 GLY 176 173 173 GLY GLY u . n A 1 177 PHE 177 174 174 PHE PHE u . n A 1 178 PHE 178 175 175 PHE PHE u . n A 1 179 GLN 179 176 176 GLN GLN u . n A 1 180 PRO 180 177 177 PRO PRO u . n A 1 181 ASN 181 178 178 ASN ASN u . n A 1 182 ASN 182 179 179 ASN ASN u . n A 1 183 LYS 183 180 180 LYS LYS u . n A 1 184 GLN 184 181 181 GLN GLN u . n A 1 185 ASN 185 182 182 ASN ASN u . n A 1 186 ALA 186 183 183 ALA ALA u . n A 1 187 LEU 187 184 184 LEU LEU u . n A 1 188 TRP 188 185 185 TRP TRP u . n A 1 189 PHE 189 186 186 PHE PHE u . n A 1 190 PRO 190 187 187 PRO PRO u . n A 1 191 ASN 191 188 188 ASN ASN u . n A 1 192 LYS 192 189 189 LYS LYS u . n A 1 193 GLN 193 190 190 GLN GLN u . n A 1 194 GLY 194 191 191 GLY GLY u . n A 1 195 GLN 195 192 192 GLN GLN u . n A 1 196 ASN 196 193 193 ASN ASN u . n A 1 197 ILE 197 194 194 ILE ILE u . n A 1 198 GLN 198 195 195 GLN GLN u . n A 1 199 TRP 199 196 196 TRP TRP u . n A 1 200 SER 200 197 197 SER SER u . n A 1 201 GLY 201 198 198 GLY GLY u . n A 1 202 LEU 202 199 199 LEU LEU u . n A 1 203 GLY 203 200 200 GLY GLY u . n A 1 204 PHE 204 201 201 PHE PHE u . n A 1 205 ALA 205 202 202 ALA ALA u . n A 1 206 MET 206 203 203 MET MET u . n A 1 207 GLN 207 204 204 GLN GLN u . n A 1 208 LYS 208 205 205 LYS LYS u . n A 1 209 GLY 209 206 206 GLY GLY u . n A 1 210 ASN 210 207 207 ASN ASN u . n A 1 211 GLU 211 208 208 GLU GLU u . n A 1 212 ALA 212 209 209 ALA ALA u . n A 1 213 TYR 213 210 210 TYR TYR u . n A 1 214 ASN 214 211 211 ASN ASN u . n A 1 215 TYR 215 212 212 TYR TYR u . n A 1 216 GLN 216 213 213 GLN GLN u . n A 1 217 VAL 217 214 214 VAL VAL u . n A 1 218 ARG 218 215 215 ARG ARG u . n A 1 219 PHE 219 216 216 PHE PHE u . n A 1 220 THR 220 217 217 THR THR u . n A 1 221 LEU 221 218 218 LEU LEU u . n A 1 222 TYR 222 219 219 TYR TYR u . n A 1 223 VAL 223 220 220 VAL VAL u . n A 1 224 GLN 224 221 221 GLN GLN u . n A 1 225 PHE 225 222 222 PHE PHE u . n A 1 226 ARG 226 223 223 ARG ARG u . n A 1 227 GLU 227 224 224 GLU GLU u . n A 1 228 PHE 228 225 225 PHE PHE u . n A 1 229 ASP 229 226 226 ASP ASP u . n A 1 230 LEU 230 227 227 LEU LEU u . n A 1 231 PHE 231 228 228 PHE PHE u . n A 1 232 ASN 232 229 229 ASN ASN u . n A 1 233 ASN 233 230 230 ASN ASN u . n # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version dev_3311: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6RPO _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RPO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6RPO _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6RPO _struct.title 'bat circovirus without DNA VLP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6RPO _struct_keywords.text 'bat circovirus without DNA VLP, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6RPO _struct_ref.pdbx_db_accession 6RPO _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6RPO _struct_ref_seq.pdbx_strand_id u _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 233 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6RPO _struct_ref_seq.db_align_beg -2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -2 _struct_ref_seq.pdbx_auth_seq_align_end 230 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 60-meric _pdbx_struct_assembly.oligomeric_count 60 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression '(1-60)' _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? 0.500000 -0.809017 0.309017 0.00000 0.809017 0.309017 -0.500000 0.00000 0.309017 0.500000 0.809017 0.00000 3 'point symmetry operation' ? ? -0.309017 -0.500000 0.809017 0.00000 0.500000 -0.809017 -0.309017 0.00000 0.809017 0.309017 0.500000 0.00000 4 'point symmetry operation' ? ? -0.309017 0.500000 0.809017 0.00000 -0.500000 -0.809017 0.309017 0.00000 0.809017 -0.309017 0.500000 0.00000 5 'point symmetry operation' ? ? 0.500000 0.809017 0.309017 0.00000 -0.809017 0.309017 0.500000 0.00000 0.309017 -0.500000 0.809017 0.00000 6 'point symmetry operation' ? ? -0.809017 0.309017 0.500000 0.00000 0.309017 -0.500000 0.809017 0.00000 0.500000 0.809017 0.309017 0.00000 7 'point symmetry operation' ? ? 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 1.000000 0.000000 0.000000 0.00000 8 'point symmetry operation' ? ? 0.809017 0.309017 -0.500000 0.00000 0.309017 0.500000 0.809017 0.00000 0.500000 -0.809017 0.309017 0.00000 9 'point symmetry operation' ? ? 0.500000 -0.809017 -0.309017 0.00000 0.809017 0.309017 0.500000 0.00000 -0.309017 -0.500000 0.809017 0.00000 10 'point symmetry operation' ? ? -0.500000 -0.809017 0.309017 0.00000 0.809017 -0.309017 0.500000 0.00000 -0.309017 0.500000 0.809017 0.00000 11 'point symmetry operation' ? ? -0.500000 -0.809017 0.309017 0.00000 -0.809017 0.309017 -0.500000 0.00000 0.309017 -0.500000 -0.809017 0.00000 12 'point symmetry operation' ? ? -0.809017 0.309017 0.500000 0.00000 -0.309017 0.500000 -0.809017 0.00000 -0.500000 -0.809017 -0.309017 0.00000 13 'point symmetry operation' ? ? 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 -1.000000 0.00000 -1.000000 0.000000 0.000000 0.00000 14 'point symmetry operation' ? ? 0.809017 0.309017 -0.500000 0.00000 -0.309017 -0.500000 -0.809017 0.00000 -0.500000 0.809017 -0.309017 0.00000 15 'point symmetry operation' ? ? 0.500000 -0.809017 -0.309017 0.00000 -0.809017 -0.309017 -0.500000 0.00000 0.309017 0.500000 -0.809017 0.00000 16 'point symmetry operation' ? ? 0.309017 0.500000 -0.809017 0.00000 0.500000 -0.809017 -0.309017 0.00000 -0.809017 -0.309017 -0.500000 0.00000 17 'point symmetry operation' ? ? 0.309017 -0.500000 -0.809017 0.00000 -0.500000 -0.809017 0.309017 0.00000 -0.809017 0.309017 -0.500000 0.00000 18 'point symmetry operation' ? ? -0.500000 -0.809017 -0.309017 0.00000 -0.809017 0.309017 0.500000 0.00000 -0.309017 0.500000 -0.809017 0.00000 19 'point symmetry operation' ? ? -1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 -1.000000 0.00000 20 'point symmetry operation' ? ? -0.500000 0.809017 -0.309017 0.00000 0.809017 0.309017 -0.500000 0.00000 -0.309017 -0.500000 -0.809017 0.00000 21 'point symmetry operation' ? ? -0.500000 -0.809017 -0.309017 0.00000 0.809017 -0.309017 -0.500000 0.00000 0.309017 -0.500000 0.809017 0.00000 22 'point symmetry operation' ? ? -1.000000 0.000000 0.000000 0.00000 0.000000 -1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 23 'point symmetry operation' ? ? -0.500000 0.809017 -0.309017 0.00000 -0.809017 -0.309017 0.500000 0.00000 0.309017 0.500000 0.809017 0.00000 24 'point symmetry operation' ? ? 0.309017 0.500000 -0.809017 0.00000 -0.500000 0.809017 0.309017 0.00000 0.809017 0.309017 0.500000 0.00000 25 'point symmetry operation' ? ? 0.309017 -0.500000 -0.809017 0.00000 0.500000 0.809017 -0.309017 0.00000 0.809017 -0.309017 0.500000 0.00000 26 'point symmetry operation' ? ? 0.000000 0.000000 -1.000000 0.00000 -1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 27 'point symmetry operation' ? ? -0.309017 -0.500000 -0.809017 0.00000 -0.500000 0.809017 -0.309017 0.00000 0.809017 0.309017 -0.500000 0.00000 28 'point symmetry operation' ? ? -0.809017 -0.309017 -0.500000 0.00000 0.309017 0.500000 -0.809017 0.00000 0.500000 -0.809017 -0.309017 0.00000 29 'point symmetry operation' ? ? -0.809017 0.309017 -0.500000 0.00000 0.309017 -0.500000 -0.809017 0.00000 -0.500000 -0.809017 0.309017 0.00000 30 'point symmetry operation' ? ? -0.309017 0.500000 -0.809017 0.00000 -0.500000 -0.809017 -0.309017 0.00000 -0.809017 0.309017 0.500000 0.00000 31 'point symmetry operation' ? ? 0.809017 0.309017 0.500000 0.00000 -0.309017 -0.500000 0.809017 0.00000 0.500000 -0.809017 -0.309017 0.00000 32 'point symmetry operation' ? ? 0.809017 -0.309017 0.500000 0.00000 -0.309017 0.500000 0.809017 0.00000 -0.500000 -0.809017 0.309017 0.00000 33 'point symmetry operation' ? ? 0.309017 -0.500000 0.809017 0.00000 0.500000 0.809017 0.309017 0.00000 -0.809017 0.309017 0.500000 0.00000 34 'point symmetry operation' ? ? 0.000000 0.000000 1.000000 0.00000 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 35 'point symmetry operation' ? ? 0.309017 0.500000 0.809017 0.00000 0.500000 -0.809017 0.309017 0.00000 0.809017 0.309017 -0.500000 0.00000 36 'point symmetry operation' ? ? -0.309017 0.500000 0.809017 0.00000 0.500000 0.809017 -0.309017 0.00000 -0.809017 0.309017 -0.500000 0.00000 37 'point symmetry operation' ? ? 0.500000 0.809017 0.309017 0.00000 0.809017 -0.309017 -0.500000 0.00000 -0.309017 0.500000 -0.809017 0.00000 38 'point symmetry operation' ? ? 1.000000 0.000000 0.000000 0.00000 0.000000 -1.000000 0.000000 0.00000 0.000000 0.000000 -1.000000 0.00000 39 'point symmetry operation' ? ? 0.500000 -0.809017 0.309017 0.00000 -0.809017 -0.309017 0.500000 0.00000 -0.309017 -0.500000 -0.809017 0.00000 40 'point symmetry operation' ? ? -0.309017 -0.500000 0.809017 0.00000 -0.500000 0.809017 0.309017 0.00000 -0.809017 -0.309017 -0.500000 0.00000 41 'point symmetry operation' ? ? -0.500000 0.809017 0.309017 0.00000 -0.809017 -0.309017 -0.500000 0.00000 -0.309017 -0.500000 0.809017 0.00000 42 'point symmetry operation' ? ? 0.500000 0.809017 -0.309017 0.00000 -0.809017 0.309017 -0.500000 0.00000 -0.309017 0.500000 0.809017 0.00000 43 'point symmetry operation' ? ? 0.809017 -0.309017 -0.500000 0.00000 -0.309017 0.500000 -0.809017 0.00000 0.500000 0.809017 0.309017 0.00000 44 'point symmetry operation' ? ? 0.000000 -1.000000 0.000000 0.00000 0.000000 0.000000 -1.000000 0.00000 1.000000 0.000000 0.000000 0.00000 45 'point symmetry operation' ? ? -0.809017 -0.309017 0.500000 0.00000 -0.309017 -0.500000 -0.809017 0.00000 0.500000 -0.809017 0.309017 0.00000 46 'point symmetry operation' ? ? 0.809017 -0.309017 0.500000 0.00000 0.309017 -0.500000 -0.809017 0.00000 0.500000 0.809017 -0.309017 0.00000 47 'point symmetry operation' ? ? 0.309017 -0.500000 0.809017 0.00000 -0.500000 -0.809017 -0.309017 0.00000 0.809017 -0.309017 -0.500000 0.00000 48 'point symmetry operation' ? ? 0.000000 0.000000 1.000000 0.00000 -1.000000 0.000000 0.000000 0.00000 0.000000 -1.000000 0.000000 0.00000 49 'point symmetry operation' ? ? 0.309017 0.500000 0.809017 0.00000 -0.500000 0.809017 -0.309017 0.00000 -0.809017 -0.309017 0.500000 0.00000 50 'point symmetry operation' ? ? 0.809017 0.309017 0.500000 0.00000 0.309017 0.500000 -0.809017 0.00000 -0.500000 0.809017 0.309017 0.00000 51 'point symmetry operation' ? ? -0.309017 0.500000 -0.809017 0.00000 0.500000 0.809017 0.309017 0.00000 0.809017 -0.309017 -0.500000 0.00000 52 'point symmetry operation' ? ? 0.000000 0.000000 -1.000000 0.00000 1.000000 0.000000 0.000000 0.00000 0.000000 -1.000000 0.000000 0.00000 53 'point symmetry operation' ? ? -0.309017 -0.500000 -0.809017 0.00000 0.500000 -0.809017 0.309017 0.00000 -0.809017 -0.309017 0.500000 0.00000 54 'point symmetry operation' ? ? -0.809017 -0.309017 -0.500000 0.00000 -0.309017 -0.500000 0.809017 0.00000 -0.500000 0.809017 0.309017 0.00000 55 'point symmetry operation' ? ? -0.809017 0.309017 -0.500000 0.00000 -0.309017 0.500000 0.809017 0.00000 0.500000 0.809017 -0.309017 0.00000 56 'point symmetry operation' ? ? 0.000000 -1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 -1.000000 0.000000 0.000000 0.00000 57 'point symmetry operation' ? ? -0.809017 -0.309017 0.500000 0.00000 0.309017 0.500000 0.809017 0.00000 -0.500000 0.809017 -0.309017 0.00000 58 'point symmetry operation' ? ? -0.500000 0.809017 0.309017 0.00000 0.809017 0.309017 0.500000 0.00000 0.309017 0.500000 -0.809017 0.00000 59 'point symmetry operation' ? ? 0.500000 0.809017 -0.309017 0.00000 0.809017 -0.309017 0.500000 0.00000 0.309017 -0.500000 -0.809017 0.00000 60 'point symmetry operation' ? ? 0.809017 -0.309017 -0.500000 0.00000 0.309017 -0.500000 0.809017 0.00000 -0.500000 -0.809017 -0.309017 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 35 ? LYS A 43 ? ARG u 32 LYS u 40 1 ? 9 HELX_P HELX_P2 2 LEU A 77 ? ASP A 79 ? LEU u 74 ASP u 76 1 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? 6 ? 1 ? 7 ? 1 ? 8 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 ILE A 46 ? LYS A 61 ? ILE u 43 LYS u 58 2 1 SER A 67 ? THR A 74 ? SER u 64 THR u 71 3 1 TYR A 96 ? PRO A 108 ? TYR u 93 PRO u 105 4 1 TYR A 119 ? ILE A 125 ? TYR u 116 ILE u 122 5 1 ARG A 151 ? ARG A 155 ? ARG u 148 ARG u 152 6 1 TYR A 160 ? PHE A 165 ? TYR u 157 PHE u 162 7 1 GLY A 201 ? LYS A 208 ? GLY u 198 LYS u 205 8 1 TYR A 213 ? ARG A 226 ? TYR u 210 ARG u 223 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA u 155 ? ? -142.72 19.60 2 1 ILE u 168 ? ? -93.93 -63.42 3 1 GLN u 190 ? ? 59.20 72.65 4 1 GLU u 224 ? ? 62.42 75.15 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ARG u 152 ? ? THR u 153 ? ? -147.57 2 1 THR u 153 ? ? PRO u 154 ? ? 143.81 # _em_3d_fitting.entry_id 6RPO _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 83 _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6RPO _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 58147 _em_3d_reconstruction.resolution 2.39 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Bat circovirus' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6RPO _em_image_scans.id 1 _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 32 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6RPO _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode OTHER _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode OTHER _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 3500 _em_imaging.nominal_defocus_min 750 _em_imaging.nominal_magnification 47170 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER/RHODIUM _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.method ? _em_sample_support.film_material ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate STRAIN _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument 'LEICA EM CPC' _em_vitrification.entry_id 6RPO _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6RPO _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6RPO _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 u MET -2 ? A MET 1 2 1 Y 1 u VAL -1 ? A VAL 2 3 1 Y 1 u TYR 0 ? A TYR 3 4 1 Y 1 u ARG 1 ? A ARG 4 5 1 Y 1 u ARG 2 ? A ARG 5 6 1 Y 1 u ARG 3 ? A ARG 6 7 1 Y 1 u ARG 4 ? A ARG 7 8 1 Y 1 u GLY 5 ? A GLY 8 9 1 Y 1 u ARG 6 ? A ARG 9 10 1 Y 1 u GLY 7 ? A GLY 10 11 1 Y 1 u ARG 8 ? A ARG 11 12 1 Y 1 u ARG 9 ? A ARG 12 13 1 Y 1 u ALA 10 ? A ALA 13 14 1 Y 1 u ARG 11 ? A ARG 14 15 1 Y 1 u PRO 12 ? A PRO 15 16 1 Y 1 u MET 13 ? A MET 16 17 1 Y 1 u SER 14 ? A SER 17 18 1 Y 1 u SER 15 ? A SER 18 19 1 Y 1 u LEU 16 ? A LEU 19 20 1 Y 1 u GLY 17 ? A GLY 20 21 1 Y 1 u ARG 18 ? A ARG 21 22 1 Y 1 u LEU 19 ? A LEU 22 23 1 Y 1 u LEU 20 ? A LEU 23 24 1 Y 1 u TYR 21 ? A TYR 24 25 1 Y 1 u ARG 22 ? A ARG 25 26 1 Y 1 u LYS 23 ? A LYS 26 27 1 Y 1 u PRO 24 ? A PRO 27 28 1 Y 1 u TRP 25 ? A TRP 28 29 1 Y 1 u LEU 26 ? A LEU 29 30 1 Y 1 u MET 27 ? A MET 30 31 1 Y 1 u HIS 28 ? A HIS 31 32 1 Y 1 u PRO 29 ? A PRO 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 1.42 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 1329650 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Bat circovirus' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 57 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 1474 # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 124275 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? Gautomatch ? 1 ? ? 2 'IMAGE ACQUISITION' ? EPU ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? RELION ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? 'UCSF Chimera' ? ? 1 ? 8 'MODEL FITTING' ? Coot ? ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 12 CLASSIFICATION ? RELION ? 1 ? ? 13 RECONSTRUCTION ? RELION ? 1 ? ? 14 'MODEL REFINEMENT' ? Coot ? ? 1 ? 15 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter 200 _em_virus_shell.name ? _em_virus_shell.triangulation 1 # _atom_sites.entry_id 6RPO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_