data_6RRV # _entry.id 6RRV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6RRV WWPDB D_1292102493 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '6QSZ contains the same protein domain in complex with Esc1 pS1450 peptide' 6QSZ unspecified PDB '6QTM contains the same protein domain in complex with Ty5 pS1095 peptide' 6QTM unspecified PDB '6RR0 contains the same protein domain in complex with Ubp10 pT123 peptide' 6RR0 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6RRV _pdbx_database_status.recvd_initial_deposition_date 2019-05-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Deshpande, I.' 1 ? 'Keusch, J.J.' 2 ? 'Challa, K.' 3 ? 'Iesmantavicius, V.' 4 ? 'Gasser, S.M.' 5 ? 'Gut, H.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Embo J.' _citation.journal_id_ASTM EMJODG _citation.journal_id_CSD 0897 _citation.journal_id_ISSN 1460-2075 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 38 _citation.language ? _citation.page_first e101744 _citation.page_last e101744 _citation.title 'The Sir4 H-BRCT domain interacts with phospho-proteins to sequester and repress yeast heterochromatin.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.15252/embj.2019101744 _citation.pdbx_database_id_PubMed 31515872 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Deshpande, I.' 1 ? primary 'Keusch, J.J.' 2 0000-0001-7576-0838 primary 'Challa, K.' 3 ? primary 'Iesmantavicius, V.' 4 ? primary 'Gasser, S.M.' 5 ? primary 'Gut, H.' 6 0000-0001-7205-6044 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 118.09 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6RRV _cell.details ? _cell.formula_units_Z ? _cell.length_a 69.660 _cell.length_a_esd ? _cell.length_b 38.130 _cell.length_b_esd ? _cell.length_c 48.620 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein SIR4' 14871.911 1 ? ? ? 'Fragment (residues 961-1085)' 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'BROMIDE ION' 79.904 1 ? ? ? ? 4 water nat water 18.015 213 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Silent information regulator 4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPKPKNTKENLSKSSWRQEWLANLKLISVSLVDEFPSELSDSDRQIINEKMQLLKDIFANNLKSAISNNFRESDIIILKG EIEDYPMSSEIKIYYNELQNKPDAKKARFWSFMKTQRFVSNMGFDIQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GPKPKNTKENLSKSSWRQEWLANLKLISVSLVDEFPSELSDSDRQIINEKMQLLKDIFANNLKSAISNNFRESDIIILKG EIEDYPMSSEIKIYYNELQNKPDAKKARFWSFMKTQRFVSNMGFDIQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LYS n 1 4 PRO n 1 5 LYS n 1 6 ASN n 1 7 THR n 1 8 LYS n 1 9 GLU n 1 10 ASN n 1 11 LEU n 1 12 SER n 1 13 LYS n 1 14 SER n 1 15 SER n 1 16 TRP n 1 17 ARG n 1 18 GLN n 1 19 GLU n 1 20 TRP n 1 21 LEU n 1 22 ALA n 1 23 ASN n 1 24 LEU n 1 25 LYS n 1 26 LEU n 1 27 ILE n 1 28 SER n 1 29 VAL n 1 30 SER n 1 31 LEU n 1 32 VAL n 1 33 ASP n 1 34 GLU n 1 35 PHE n 1 36 PRO n 1 37 SER n 1 38 GLU n 1 39 LEU n 1 40 SER n 1 41 ASP n 1 42 SER n 1 43 ASP n 1 44 ARG n 1 45 GLN n 1 46 ILE n 1 47 ILE n 1 48 ASN n 1 49 GLU n 1 50 LYS n 1 51 MET n 1 52 GLN n 1 53 LEU n 1 54 LEU n 1 55 LYS n 1 56 ASP n 1 57 ILE n 1 58 PHE n 1 59 ALA n 1 60 ASN n 1 61 ASN n 1 62 LEU n 1 63 LYS n 1 64 SER n 1 65 ALA n 1 66 ILE n 1 67 SER n 1 68 ASN n 1 69 ASN n 1 70 PHE n 1 71 ARG n 1 72 GLU n 1 73 SER n 1 74 ASP n 1 75 ILE n 1 76 ILE n 1 77 ILE n 1 78 LEU n 1 79 LYS n 1 80 GLY n 1 81 GLU n 1 82 ILE n 1 83 GLU n 1 84 ASP n 1 85 TYR n 1 86 PRO n 1 87 MET n 1 88 SER n 1 89 SER n 1 90 GLU n 1 91 ILE n 1 92 LYS n 1 93 ILE n 1 94 TYR n 1 95 TYR n 1 96 ASN n 1 97 GLU n 1 98 LEU n 1 99 GLN n 1 100 ASN n 1 101 LYS n 1 102 PRO n 1 103 ASP n 1 104 ALA n 1 105 LYS n 1 106 LYS n 1 107 ALA n 1 108 ARG n 1 109 PHE n 1 110 TRP n 1 111 SER n 1 112 PHE n 1 113 MET n 1 114 LYS n 1 115 THR n 1 116 GLN n 1 117 ARG n 1 118 PHE n 1 119 VAL n 1 120 SER n 1 121 ASN n 1 122 MET n 1 123 GLY n 1 124 PHE n 1 125 ASP n 1 126 ILE n 1 127 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 127 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SIR4, ASD1, STE9, UTH2, YDR227W, YD9934.12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant STAR _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SIR4_YEAST _struct_ref.pdbx_db_accession P11978 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KPKNTKENLSKSSWRQEWLANLKLISVSLVDEFPSELSDSDRQIINEKMQLLKDIFANNLKSAISNNFRESDIIILKGEI EDYPMSSEIKIYYNELQNKPDAKKARFWSFMKTQRFVSNMGFDIQ ; _struct_ref.pdbx_align_begin 961 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6RRV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11978 _struct_ref_seq.db_align_beg 961 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1085 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 961 _struct_ref_seq.pdbx_auth_seq_align_end 1085 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6RRV GLY A 1 ? UNP P11978 ? ? 'expression tag' 959 1 1 6RRV PRO A 2 ? UNP P11978 ? ? 'expression tag' 960 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6RRV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;35% PEG 2000 MME 150 mM potassium bromide ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-05-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.999 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.999 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6RRV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.10 _reflns.d_resolution_low 42.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 43703 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.034 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.10 _reflns_shell.d_res_low 1.13 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 7.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2598 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.128 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.98 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6RRV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.100 _refine.ls_d_res_low 42.892 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 43698 _refine.ls_number_reflns_R_free 2206 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.44 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1184 _refine.ls_R_factor_R_free 0.1417 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1172 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.01 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.50 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 12.32 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.07 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1046 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 1261 _refine_hist.d_res_high 1.100 _refine_hist.d_res_low 42.892 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1209 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.249 ? 1646 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.227 ? 486 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.084 ? 171 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 222 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.1000 1.1239 . . 100 2043 76.00 . . . 0.1563 . 0.1123 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1239 1.1500 . . 115 2420 89.00 . . . 0.1312 . 0.1029 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1500 1.1788 . . 134 2518 93.00 . . . 0.1326 . 0.0965 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1788 1.2107 . . 126 2536 93.00 . . . 0.1434 . 0.1028 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2107 1.2463 . . 121 2565 94.00 . . . 0.1376 . 0.1030 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2463 1.2865 . . 151 2584 96.00 . . . 0.1334 . 0.0992 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2865 1.3325 . . 152 2558 96.00 . . . 0.1508 . 0.1006 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3325 1.3859 . . 146 2641 97.00 . . . 0.1392 . 0.0982 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3859 1.4489 . . 143 2656 98.00 . . . 0.1291 . 0.0938 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4489 1.5253 . . 144 2708 99.00 . . . 0.1207 . 0.0909 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5253 1.6209 . . 144 2659 99.00 . . . 0.1198 . 0.0929 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6209 1.7460 . . 144 2703 99.00 . . . 0.1265 . 0.0959 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7460 1.9218 . . 154 2695 99.00 . . . 0.1289 . 0.1086 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9218 2.1998 . . 137 2716 99.00 . . . 0.1399 . 0.1110 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1998 2.7715 . . 160 2682 99.00 . . . 0.1353 . 0.1275 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7715 42.9244 . . 135 2808 99.00 . . . 0.1715 . 0.1483 . . . . . . . . . . # _struct.entry_id 6RRV _struct.title 'Crystal structure of the Sir4 H-BRCT domain' _struct.pdbx_descriptor 'Regulatory protein SIR4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6RRV _struct_keywords.text 'Heterochromatin, NUCLEAR PROTEIN' _struct_keywords.pdbx_keywords 'NUCLEAR PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 10 ? LYS A 25 ? ASN A 968 LYS A 983 1 ? 16 HELX_P HELX_P2 AA2 SER A 40 ? ASN A 61 ? SER A 998 ASN A 1019 1 ? 22 HELX_P HELX_P3 AA3 ASN A 69 ? SER A 73 ? ASN A 1027 SER A 1031 5 ? 5 HELX_P HELX_P4 AA4 GLU A 81 ? TYR A 85 ? GLU A 1039 TYR A 1043 5 ? 5 HELX_P HELX_P5 AA5 SER A 89 ? ASN A 100 ? SER A 1047 ASN A 1058 1 ? 12 HELX_P HELX_P6 AA6 PHE A 112 ? MET A 122 ? PHE A 1070 MET A 1080 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 65 ? SER A 67 ? ALA A 1023 SER A 1025 AA1 2 SER A 28 ? LEU A 31 ? SER A 986 LEU A 989 AA1 3 ILE A 75 ? LEU A 78 ? ILE A 1033 LEU A 1036 AA1 4 ARG A 108 ? SER A 111 ? ARG A 1066 SER A 1069 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ALA A 65 ? O ALA A 1023 N VAL A 29 ? N VAL A 987 AA1 2 3 N SER A 30 ? N SER A 988 O ILE A 77 ? O ILE A 1035 AA1 3 4 N ILE A 76 ? N ILE A 1034 O ARG A 108 ? O ARG A 1066 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 1101 ? 2 'binding site for residue CL A 1101' AC2 Software A BR 1102 ? 2 'binding site for residue BR A 1102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 117 ? ARG A 1075 . ? 1_555 ? 2 AC1 2 ARG A 117 ? ARG A 1075 . ? 2_555 ? 3 AC2 2 SER A 12 ? SER A 970 . ? 2_555 ? 4 AC2 2 MET A 87 ? MET A 1045 . ? 1_555 ? # _atom_sites.entry_id 6RRV _atom_sites.fract_transf_matrix[1][1] 0.014355 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007663 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026226 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023314 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 959 959 GLY GLY A . n A 1 2 PRO 2 960 960 PRO PRO A . n A 1 3 LYS 3 961 961 LYS LYS A . n A 1 4 PRO 4 962 962 PRO PRO A . n A 1 5 LYS 5 963 963 LYS LYS A . n A 1 6 ASN 6 964 964 ASN ASN A . n A 1 7 THR 7 965 965 THR THR A . n A 1 8 LYS 8 966 966 LYS LYS A . n A 1 9 GLU 9 967 967 GLU GLU A . n A 1 10 ASN 10 968 968 ASN ASN A . n A 1 11 LEU 11 969 969 LEU LEU A . n A 1 12 SER 12 970 970 SER SER A . n A 1 13 LYS 13 971 971 LYS LYS A . n A 1 14 SER 14 972 972 SER SER A . n A 1 15 SER 15 973 973 SER SER A . n A 1 16 TRP 16 974 974 TRP TRP A . n A 1 17 ARG 17 975 975 ARG ARG A . n A 1 18 GLN 18 976 976 GLN GLN A . n A 1 19 GLU 19 977 977 GLU GLU A . n A 1 20 TRP 20 978 978 TRP TRP A . n A 1 21 LEU 21 979 979 LEU LEU A . n A 1 22 ALA 22 980 980 ALA ALA A . n A 1 23 ASN 23 981 981 ASN ASN A . n A 1 24 LEU 24 982 982 LEU LEU A . n A 1 25 LYS 25 983 983 LYS LYS A . n A 1 26 LEU 26 984 984 LEU LEU A . n A 1 27 ILE 27 985 985 ILE ILE A . n A 1 28 SER 28 986 986 SER SER A . n A 1 29 VAL 29 987 987 VAL VAL A . n A 1 30 SER 30 988 988 SER SER A . n A 1 31 LEU 31 989 989 LEU LEU A . n A 1 32 VAL 32 990 990 VAL VAL A . n A 1 33 ASP 33 991 991 ASP ASP A . n A 1 34 GLU 34 992 992 GLU GLU A . n A 1 35 PHE 35 993 993 PHE PHE A . n A 1 36 PRO 36 994 994 PRO PRO A . n A 1 37 SER 37 995 995 SER SER A . n A 1 38 GLU 38 996 996 GLU GLU A . n A 1 39 LEU 39 997 997 LEU LEU A . n A 1 40 SER 40 998 998 SER SER A . n A 1 41 ASP 41 999 999 ASP ASP A . n A 1 42 SER 42 1000 1000 SER SER A . n A 1 43 ASP 43 1001 1001 ASP ASP A . n A 1 44 ARG 44 1002 1002 ARG ARG A . n A 1 45 GLN 45 1003 1003 GLN GLN A . n A 1 46 ILE 46 1004 1004 ILE ILE A . n A 1 47 ILE 47 1005 1005 ILE ILE A . n A 1 48 ASN 48 1006 1006 ASN ASN A . n A 1 49 GLU 49 1007 1007 GLU GLU A . n A 1 50 LYS 50 1008 1008 LYS LYS A . n A 1 51 MET 51 1009 1009 MET MET A . n A 1 52 GLN 52 1010 1010 GLN GLN A . n A 1 53 LEU 53 1011 1011 LEU LEU A . n A 1 54 LEU 54 1012 1012 LEU LEU A . n A 1 55 LYS 55 1013 1013 LYS LYS A . n A 1 56 ASP 56 1014 1014 ASP ASP A . n A 1 57 ILE 57 1015 1015 ILE ILE A . n A 1 58 PHE 58 1016 1016 PHE PHE A . n A 1 59 ALA 59 1017 1017 ALA ALA A . n A 1 60 ASN 60 1018 1018 ASN ASN A . n A 1 61 ASN 61 1019 1019 ASN ASN A . n A 1 62 LEU 62 1020 1020 LEU LEU A . n A 1 63 LYS 63 1021 1021 LYS LYS A . n A 1 64 SER 64 1022 1022 SER SER A . n A 1 65 ALA 65 1023 1023 ALA ALA A . n A 1 66 ILE 66 1024 1024 ILE ILE A . n A 1 67 SER 67 1025 1025 SER SER A . n A 1 68 ASN 68 1026 1026 ASN ASN A . n A 1 69 ASN 69 1027 1027 ASN ASN A . n A 1 70 PHE 70 1028 1028 PHE PHE A . n A 1 71 ARG 71 1029 1029 ARG ARG A . n A 1 72 GLU 72 1030 1030 GLU GLU A . n A 1 73 SER 73 1031 1031 SER SER A . n A 1 74 ASP 74 1032 1032 ASP ASP A . n A 1 75 ILE 75 1033 1033 ILE ILE A . n A 1 76 ILE 76 1034 1034 ILE ILE A . n A 1 77 ILE 77 1035 1035 ILE ILE A . n A 1 78 LEU 78 1036 1036 LEU LEU A . n A 1 79 LYS 79 1037 1037 LYS LYS A . n A 1 80 GLY 80 1038 1038 GLY GLY A . n A 1 81 GLU 81 1039 1039 GLU GLU A . n A 1 82 ILE 82 1040 1040 ILE ILE A . n A 1 83 GLU 83 1041 1041 GLU GLU A . n A 1 84 ASP 84 1042 1042 ASP ASP A . n A 1 85 TYR 85 1043 1043 TYR TYR A . n A 1 86 PRO 86 1044 1044 PRO PRO A . n A 1 87 MET 87 1045 1045 MET MET A . n A 1 88 SER 88 1046 1046 SER SER A . n A 1 89 SER 89 1047 1047 SER SER A . n A 1 90 GLU 90 1048 1048 GLU GLU A . n A 1 91 ILE 91 1049 1049 ILE ILE A . n A 1 92 LYS 92 1050 1050 LYS LYS A . n A 1 93 ILE 93 1051 1051 ILE ILE A . n A 1 94 TYR 94 1052 1052 TYR TYR A . n A 1 95 TYR 95 1053 1053 TYR TYR A . n A 1 96 ASN 96 1054 1054 ASN ASN A . n A 1 97 GLU 97 1055 1055 GLU GLU A . n A 1 98 LEU 98 1056 1056 LEU LEU A . n A 1 99 GLN 99 1057 1057 GLN GLN A . n A 1 100 ASN 100 1058 1058 ASN ASN A . n A 1 101 LYS 101 1059 1059 LYS LYS A . n A 1 102 PRO 102 1060 1060 PRO PRO A . n A 1 103 ASP 103 1061 1061 ASP ASP A . n A 1 104 ALA 104 1062 1062 ALA ALA A . n A 1 105 LYS 105 1063 1063 LYS LYS A . n A 1 106 LYS 106 1064 1064 LYS LYS A . n A 1 107 ALA 107 1065 1065 ALA ALA A . n A 1 108 ARG 108 1066 1066 ARG ARG A . n A 1 109 PHE 109 1067 1067 PHE PHE A . n A 1 110 TRP 110 1068 1068 TRP TRP A . n A 1 111 SER 111 1069 1069 SER SER A . n A 1 112 PHE 112 1070 1070 PHE PHE A . n A 1 113 MET 113 1071 1071 MET MET A . n A 1 114 LYS 114 1072 1072 LYS LYS A . n A 1 115 THR 115 1073 1073 THR THR A . n A 1 116 GLN 116 1074 1074 GLN GLN A . n A 1 117 ARG 117 1075 1075 ARG ARG A . n A 1 118 PHE 118 1076 1076 PHE PHE A . n A 1 119 VAL 119 1077 1077 VAL VAL A . n A 1 120 SER 120 1078 1078 SER SER A . n A 1 121 ASN 121 1079 1079 ASN ASN A . n A 1 122 MET 122 1080 1080 MET MET A . n A 1 123 GLY 123 1081 1081 GLY GLY A . n A 1 124 PHE 124 1082 1082 PHE PHE A . n A 1 125 ASP 125 1083 1083 ASP ASP A . n A 1 126 ILE 126 1084 1084 ILE ILE A . n A 1 127 GLN 127 1085 1085 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 1101 1 CL CL A . C 3 BR 1 1102 1 BR BR A . D 4 HOH 1 1201 206 HOH HOH A . D 4 HOH 2 1202 73 HOH HOH A . D 4 HOH 3 1203 223 HOH HOH A . D 4 HOH 4 1204 196 HOH HOH A . D 4 HOH 5 1205 40 HOH HOH A . D 4 HOH 6 1206 2 HOH HOH A . D 4 HOH 7 1207 161 HOH HOH A . D 4 HOH 8 1208 62 HOH HOH A . D 4 HOH 9 1209 164 HOH HOH A . D 4 HOH 10 1210 171 HOH HOH A . D 4 HOH 11 1211 147 HOH HOH A . D 4 HOH 12 1212 89 HOH HOH A . D 4 HOH 13 1213 108 HOH HOH A . D 4 HOH 14 1214 205 HOH HOH A . D 4 HOH 15 1215 170 HOH HOH A . D 4 HOH 16 1216 123 HOH HOH A . D 4 HOH 17 1217 81 HOH HOH A . D 4 HOH 18 1218 12 HOH HOH A . D 4 HOH 19 1219 80 HOH HOH A . D 4 HOH 20 1220 8 HOH HOH A . D 4 HOH 21 1221 91 HOH HOH A . D 4 HOH 22 1222 15 HOH HOH A . D 4 HOH 23 1223 157 HOH HOH A . D 4 HOH 24 1224 181 HOH HOH A . D 4 HOH 25 1225 22 HOH HOH A . D 4 HOH 26 1226 39 HOH HOH A . D 4 HOH 27 1227 47 HOH HOH A . D 4 HOH 28 1228 239 HOH HOH A . D 4 HOH 29 1229 77 HOH HOH A . D 4 HOH 30 1230 167 HOH HOH A . D 4 HOH 31 1231 194 HOH HOH A . D 4 HOH 32 1232 140 HOH HOH A . D 4 HOH 33 1233 208 HOH HOH A . D 4 HOH 34 1234 27 HOH HOH A . D 4 HOH 35 1235 82 HOH HOH A . D 4 HOH 36 1236 124 HOH HOH A . D 4 HOH 37 1237 41 HOH HOH A . D 4 HOH 38 1238 122 HOH HOH A . D 4 HOH 39 1239 145 HOH HOH A . D 4 HOH 40 1240 184 HOH HOH A . D 4 HOH 41 1241 7 HOH HOH A . D 4 HOH 42 1242 71 HOH HOH A . D 4 HOH 43 1243 101 HOH HOH A . D 4 HOH 44 1244 96 HOH HOH A . D 4 HOH 45 1245 142 HOH HOH A . D 4 HOH 46 1246 105 HOH HOH A . D 4 HOH 47 1247 44 HOH HOH A . D 4 HOH 48 1248 57 HOH HOH A . D 4 HOH 49 1249 64 HOH HOH A . D 4 HOH 50 1250 156 HOH HOH A . D 4 HOH 51 1251 211 HOH HOH A . D 4 HOH 52 1252 6 HOH HOH A . D 4 HOH 53 1253 26 HOH HOH A . D 4 HOH 54 1254 169 HOH HOH A . D 4 HOH 55 1255 38 HOH HOH A . D 4 HOH 56 1256 66 HOH HOH A . D 4 HOH 57 1257 35 HOH HOH A . D 4 HOH 58 1258 31 HOH HOH A . D 4 HOH 59 1259 238 HOH HOH A . D 4 HOH 60 1260 10 HOH HOH A . D 4 HOH 61 1261 172 HOH HOH A . D 4 HOH 62 1262 84 HOH HOH A . D 4 HOH 63 1263 34 HOH HOH A . D 4 HOH 64 1264 93 HOH HOH A . D 4 HOH 65 1265 153 HOH HOH A . D 4 HOH 66 1266 59 HOH HOH A . D 4 HOH 67 1267 76 HOH HOH A . D 4 HOH 68 1268 20 HOH HOH A . D 4 HOH 69 1269 99 HOH HOH A . D 4 HOH 70 1270 5 HOH HOH A . D 4 HOH 71 1271 149 HOH HOH A . D 4 HOH 72 1272 17 HOH HOH A . D 4 HOH 73 1273 32 HOH HOH A . D 4 HOH 74 1274 143 HOH HOH A . D 4 HOH 75 1275 46 HOH HOH A . D 4 HOH 76 1276 118 HOH HOH A . D 4 HOH 77 1277 78 HOH HOH A . D 4 HOH 78 1278 69 HOH HOH A . D 4 HOH 79 1279 182 HOH HOH A . D 4 HOH 80 1280 65 HOH HOH A . D 4 HOH 81 1281 113 HOH HOH A . D 4 HOH 82 1282 155 HOH HOH A . D 4 HOH 83 1283 11 HOH HOH A . D 4 HOH 84 1284 56 HOH HOH A . D 4 HOH 85 1285 1 HOH HOH A . D 4 HOH 86 1286 103 HOH HOH A . D 4 HOH 87 1287 28 HOH HOH A . D 4 HOH 88 1288 222 HOH HOH A . D 4 HOH 89 1289 33 HOH HOH A . D 4 HOH 90 1290 58 HOH HOH A . D 4 HOH 91 1291 3 HOH HOH A . D 4 HOH 92 1292 43 HOH HOH A . D 4 HOH 93 1293 23 HOH HOH A . D 4 HOH 94 1294 85 HOH HOH A . D 4 HOH 95 1295 237 HOH HOH A . D 4 HOH 96 1296 98 HOH HOH A . D 4 HOH 97 1297 97 HOH HOH A . D 4 HOH 98 1298 9 HOH HOH A . D 4 HOH 99 1299 160 HOH HOH A . D 4 HOH 100 1300 192 HOH HOH A . D 4 HOH 101 1301 95 HOH HOH A . D 4 HOH 102 1302 16 HOH HOH A . D 4 HOH 103 1303 83 HOH HOH A . D 4 HOH 104 1304 25 HOH HOH A . D 4 HOH 105 1305 14 HOH HOH A . D 4 HOH 106 1306 102 HOH HOH A . D 4 HOH 107 1307 19 HOH HOH A . D 4 HOH 108 1308 45 HOH HOH A . D 4 HOH 109 1309 13 HOH HOH A . D 4 HOH 110 1310 175 HOH HOH A . D 4 HOH 111 1311 90 HOH HOH A . D 4 HOH 112 1312 52 HOH HOH A . D 4 HOH 113 1313 130 HOH HOH A . D 4 HOH 114 1314 42 HOH HOH A . D 4 HOH 115 1315 72 HOH HOH A . D 4 HOH 116 1316 120 HOH HOH A . D 4 HOH 117 1317 50 HOH HOH A . D 4 HOH 118 1318 180 HOH HOH A . D 4 HOH 119 1319 92 HOH HOH A . D 4 HOH 120 1320 100 HOH HOH A . D 4 HOH 121 1321 51 HOH HOH A . D 4 HOH 122 1322 193 HOH HOH A . D 4 HOH 123 1323 21 HOH HOH A . D 4 HOH 124 1324 18 HOH HOH A . D 4 HOH 125 1325 4 HOH HOH A . D 4 HOH 126 1326 94 HOH HOH A . D 4 HOH 127 1327 67 HOH HOH A . D 4 HOH 128 1328 87 HOH HOH A . D 4 HOH 129 1329 148 HOH HOH A . D 4 HOH 130 1330 86 HOH HOH A . D 4 HOH 131 1331 63 HOH HOH A . D 4 HOH 132 1332 198 HOH HOH A . D 4 HOH 133 1333 36 HOH HOH A . D 4 HOH 134 1334 74 HOH HOH A . D 4 HOH 135 1335 131 HOH HOH A . D 4 HOH 136 1336 79 HOH HOH A . D 4 HOH 137 1337 48 HOH HOH A . D 4 HOH 138 1338 24 HOH HOH A . D 4 HOH 139 1339 30 HOH HOH A . D 4 HOH 140 1340 225 HOH HOH A . D 4 HOH 141 1341 75 HOH HOH A . D 4 HOH 142 1342 168 HOH HOH A . D 4 HOH 143 1343 189 HOH HOH A . D 4 HOH 144 1344 29 HOH HOH A . D 4 HOH 145 1345 70 HOH HOH A . D 4 HOH 146 1346 165 HOH HOH A . D 4 HOH 147 1347 203 HOH HOH A . D 4 HOH 148 1348 158 HOH HOH A . D 4 HOH 149 1349 139 HOH HOH A . D 4 HOH 150 1350 112 HOH HOH A . D 4 HOH 151 1351 209 HOH HOH A . D 4 HOH 152 1352 240 HOH HOH A . D 4 HOH 153 1353 137 HOH HOH A . D 4 HOH 154 1354 88 HOH HOH A . D 4 HOH 155 1355 109 HOH HOH A . D 4 HOH 156 1356 185 HOH HOH A . D 4 HOH 157 1357 136 HOH HOH A . D 4 HOH 158 1358 186 HOH HOH A . D 4 HOH 159 1359 117 HOH HOH A . D 4 HOH 160 1360 60 HOH HOH A . D 4 HOH 161 1361 159 HOH HOH A . D 4 HOH 162 1362 128 HOH HOH A . D 4 HOH 163 1363 231 HOH HOH A . D 4 HOH 164 1364 121 HOH HOH A . D 4 HOH 165 1365 144 HOH HOH A . D 4 HOH 166 1366 219 HOH HOH A . D 4 HOH 167 1367 54 HOH HOH A . D 4 HOH 168 1368 201 HOH HOH A . D 4 HOH 169 1369 152 HOH HOH A . D 4 HOH 170 1370 110 HOH HOH A . D 4 HOH 171 1371 215 HOH HOH A . D 4 HOH 172 1372 176 HOH HOH A . D 4 HOH 173 1373 197 HOH HOH A . D 4 HOH 174 1374 61 HOH HOH A . D 4 HOH 175 1375 210 HOH HOH A . D 4 HOH 176 1376 114 HOH HOH A . D 4 HOH 177 1377 132 HOH HOH A . D 4 HOH 178 1378 115 HOH HOH A . D 4 HOH 179 1379 162 HOH HOH A . D 4 HOH 180 1380 224 HOH HOH A . D 4 HOH 181 1381 190 HOH HOH A . D 4 HOH 182 1382 127 HOH HOH A . D 4 HOH 183 1383 146 HOH HOH A . D 4 HOH 184 1384 135 HOH HOH A . D 4 HOH 185 1385 133 HOH HOH A . D 4 HOH 186 1386 106 HOH HOH A . D 4 HOH 187 1387 126 HOH HOH A . D 4 HOH 188 1388 125 HOH HOH A . D 4 HOH 189 1389 55 HOH HOH A . D 4 HOH 190 1390 151 HOH HOH A . D 4 HOH 191 1391 116 HOH HOH A . D 4 HOH 192 1392 53 HOH HOH A . D 4 HOH 193 1393 138 HOH HOH A . D 4 HOH 194 1394 141 HOH HOH A . D 4 HOH 195 1395 150 HOH HOH A . D 4 HOH 196 1396 134 HOH HOH A . D 4 HOH 197 1397 204 HOH HOH A . D 4 HOH 198 1398 107 HOH HOH A . D 4 HOH 199 1399 178 HOH HOH A . D 4 HOH 200 1400 188 HOH HOH A . D 4 HOH 201 1401 49 HOH HOH A . D 4 HOH 202 1402 213 HOH HOH A . D 4 HOH 203 1403 200 HOH HOH A . D 4 HOH 204 1404 212 HOH HOH A . D 4 HOH 205 1405 104 HOH HOH A . D 4 HOH 206 1406 191 HOH HOH A . D 4 HOH 207 1407 163 HOH HOH A . D 4 HOH 208 1408 195 HOH HOH A . D 4 HOH 209 1409 218 HOH HOH A . D 4 HOH 210 1410 207 HOH HOH A . D 4 HOH 211 1411 230 HOH HOH A . D 4 HOH 212 1412 174 HOH HOH A . D 4 HOH 213 1413 129 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 170 ? 1 MORE -5 ? 1 'SSA (A^2)' 8380 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ARG 1075 ? A ARG 117 2 1 A ARG 1075 ? A ARG 117 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-18 2 'Structure model' 1 1 2019-09-25 3 'Structure model' 1 2 2019-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_first' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.pdbx_database_id_DOI' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.identifier_ORCID' 7 3 'Structure model' '_citation.journal_volume' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3260: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 1029 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 1029 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 1029 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.91 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.39 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 1409 ? 6.15 . 2 1 O ? A HOH 1410 ? 6.41 . 3 1 O ? A HOH 1411 ? 6.46 . 4 1 O ? A HOH 1412 ? 6.59 . 5 1 O ? A HOH 1413 ? 6.72 . # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'BROMIDE ION' BR 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details SEC-MALS #