HEADER HYDROLASE 21-MAY-19 6RS4 TITLE STRUCTURE OF TABERSONINE SYNTHASE - AN ALPHA-BETA HYDROLASE FROM TITLE 2 CATHARANTHUS ROSEUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TABERSONINE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HYDROLASE 2,CRHL2; COMPND 5 EC: 4.-.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CATHARANTHUS ROSEUS; SOURCE 3 ORGANISM_COMMON: MADAGASCAR PERIWINKLE; SOURCE 4 ORGANISM_TAXID: 4058; SOURCE 5 GENE: TS, HL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: SOLUBL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: POPINF KEYWDS ALKALOID, TABERSONINE, NATURAL PRODUCT, BIOSYNTHESIS, ALPHA/BETA KEYWDS 2 HYDROLASE FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.CAPUTI,J.FRANKE,K.BUSSEY,S.C.FARROW,I.J.CURCINO VIEIRA, AUTHOR 2 C.E.M.STEVENSON,D.M.LAWSON,S.E.O'CONNOR REVDAT 3 24-JAN-24 6RS4 1 REMARK REVDAT 2 01-APR-20 6RS4 1 JRNL REVDAT 1 04-MAR-20 6RS4 0 JRNL AUTH L.CAPUTI,J.FRANKE,K.BUSSEY,S.C.FARROW,I.J.C.VIEIRA, JRNL AUTH 2 C.E.M.STEVENSON,D.M.LAWSON,S.E.O'CONNOR JRNL TITL STRUCTURAL BASIS OF CYCLOADDITION IN BIOSYNTHESIS OF IBOGA JRNL TITL 2 AND ASPIDOSPERMA ALKALOIDS. JRNL REF NAT.CHEM.BIOL. V. 16 383 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32066966 JRNL DOI 10.1038/S41589-019-0460-X REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 168522 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.134 REMARK 3 R VALUE (WORKING SET) : 0.133 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8863 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12394 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 689 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 699 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.63000 REMARK 3 B22 (A**2) : 1.80000 REMARK 3 B33 (A**2) : -1.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.73000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.040 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.033 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.907 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5463 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4931 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7475 ; 1.636 ; 1.639 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11481 ; 1.506 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 710 ; 6.753 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 266 ;33.774 ;23.271 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 862 ;12.624 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.114 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 702 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6251 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1169 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10394 ; 7.269 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6RS4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20160517 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 177427 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 59.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 2O7R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, PH 5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.48100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 PRO A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 GLY B 0 REMARK 465 PRO B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 ASP B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 LYS A 16 NZ REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 LEU A 26 CG CD1 CD2 REMARK 470 HIS A 27 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 63 NZ REMARK 470 LYS A 104 CE NZ REMARK 470 LYS A 194 CD CE NZ REMARK 470 LYS A 226 CE NZ REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 ARG A 313 CZ NH1 NH2 REMARK 470 LEU B 11 CD1 CD2 REMARK 470 LYS B 16 NZ REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 ARG B 22 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 470 HIS B 27 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 104 CD CE NZ REMARK 470 LYS B 146 CE NZ REMARK 470 LYS B 194 CD CE NZ REMARK 470 LYS B 212 CD CE NZ REMARK 470 ARG B 222 CZ NH1 NH2 REMARK 470 LYS B 309 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 254 CB - CG - CD1 ANGL. DEV. = 3.6 DEGREES REMARK 500 TYR B 254 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 80 48.56 82.13 REMARK 500 GLU A 85 -173.18 67.85 REMARK 500 SER A 170 -112.67 44.96 REMARK 500 GLN A 213 -157.56 -100.80 REMARK 500 ASN A 219 -89.38 -125.97 REMARK 500 ALA B 80 51.40 83.74 REMARK 500 PHE B 82 -1.43 69.29 REMARK 500 GLU B 85 -174.69 69.03 REMARK 500 SER B 170 -114.20 46.68 REMARK 500 ASN B 219 -78.48 -112.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 848 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B 851 DISTANCE = 6.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 405 DBREF1 6RS4 A 2 320 UNP TS_CATRO DBREF2 6RS4 A A0A2P1GIW3 2 320 DBREF1 6RS4 B 2 320 UNP TS_CATRO DBREF2 6RS4 B A0A2P1GIW3 2 320 SEQADV 6RS4 GLY A 0 UNP A0A2P1GIW EXPRESSION TAG SEQADV 6RS4 PRO A 1 UNP A0A2P1GIW EXPRESSION TAG SEQADV 6RS4 GLY B 0 UNP A0A2P1GIW EXPRESSION TAG SEQADV 6RS4 PRO B 1 UNP A0A2P1GIW EXPRESSION TAG SEQRES 1 A 321 GLY PRO GLY SER SER ASP GLU THR ILE PHE ASP LEU PRO SEQRES 2 A 321 PRO TYR ILE LYS VAL PHE LYS ASP GLY ARG VAL GLU ARG SEQRES 3 A 321 LEU HIS SER SER PRO TYR VAL PRO PRO SER LEU ASN ASP SEQRES 4 A 321 PRO GLU THR GLY GLY VAL SER TRP LYS ASP VAL PRO ILE SEQRES 5 A 321 SER SER VAL VAL SER ALA ARG ILE TYR LEU PRO LYS ILE SEQRES 6 A 321 ASN ASN HIS ASP GLU LYS LEU PRO ILE ILE VAL TYR PHE SEQRES 7 A 321 HIS GLY ALA GLY PHE CYS LEU GLU SER ALA PHE LYS SER SEQRES 8 A 321 PHE PHE HIS THR TYR VAL LYS HIS PHE VAL ALA GLU ALA SEQRES 9 A 321 LYS ALA ILE ALA VAL SER VAL GLU PHE ARG LEU ALA PRO SEQRES 10 A 321 GLU ASN HIS LEU PRO ALA ALA TYR GLU ASP CYS TRP GLU SEQRES 11 A 321 ALA LEU GLN TRP VAL ALA SER HIS VAL GLY LEU ASP ILE SEQRES 12 A 321 SER SER LEU LYS THR CYS ILE ASP LYS ASP PRO TRP ILE SEQRES 13 A 321 ILE ASN TYR ALA ASP PHE ASP ARG LEU TYR LEU TRP GLY SEQRES 14 A 321 ASP SER THR GLY ALA ASN ILE VAL HIS ASN THR LEU ILE SEQRES 15 A 321 ARG SER GLY LYS GLU LYS LEU ASN GLY GLY LYS VAL LYS SEQRES 16 A 321 ILE LEU GLY ALA ILE LEU TYR TYR PRO TYR PHE LEU ILE SEQRES 17 A 321 ARG THR SER SER LYS GLN SER ASP TYR MET GLU ASN GLU SEQRES 18 A 321 TYR ARG SER TYR TRP LYS LEU ALA TYR PRO ASP ALA PRO SEQRES 19 A 321 GLY GLY ASN ASP ASN PRO MET ILE ASN PRO THR ALA GLU SEQRES 20 A 321 ASN ALA PRO ASP LEU ALA GLY TYR GLY CYS SER ARG LEU SEQRES 21 A 321 LEU ILE SER MET VAL ALA ASP GLU ALA ARG ASP ILE THR SEQRES 22 A 321 LEU LEU TYR ILE ASP ALA LEU GLU LYS SER GLY TRP LYS SEQRES 23 A 321 GLY GLU LEU ASP VAL ALA ASP PHE ASP LYS GLN TYR PHE SEQRES 24 A 321 GLU LEU PHE GLU MET GLU THR GLU VAL ALA LYS ASN MET SEQRES 25 A 321 LEU ARG ARG LEU ALA SER PHE ILE LYS SEQRES 1 B 321 GLY PRO GLY SER SER ASP GLU THR ILE PHE ASP LEU PRO SEQRES 2 B 321 PRO TYR ILE LYS VAL PHE LYS ASP GLY ARG VAL GLU ARG SEQRES 3 B 321 LEU HIS SER SER PRO TYR VAL PRO PRO SER LEU ASN ASP SEQRES 4 B 321 PRO GLU THR GLY GLY VAL SER TRP LYS ASP VAL PRO ILE SEQRES 5 B 321 SER SER VAL VAL SER ALA ARG ILE TYR LEU PRO LYS ILE SEQRES 6 B 321 ASN ASN HIS ASP GLU LYS LEU PRO ILE ILE VAL TYR PHE SEQRES 7 B 321 HIS GLY ALA GLY PHE CYS LEU GLU SER ALA PHE LYS SER SEQRES 8 B 321 PHE PHE HIS THR TYR VAL LYS HIS PHE VAL ALA GLU ALA SEQRES 9 B 321 LYS ALA ILE ALA VAL SER VAL GLU PHE ARG LEU ALA PRO SEQRES 10 B 321 GLU ASN HIS LEU PRO ALA ALA TYR GLU ASP CYS TRP GLU SEQRES 11 B 321 ALA LEU GLN TRP VAL ALA SER HIS VAL GLY LEU ASP ILE SEQRES 12 B 321 SER SER LEU LYS THR CYS ILE ASP LYS ASP PRO TRP ILE SEQRES 13 B 321 ILE ASN TYR ALA ASP PHE ASP ARG LEU TYR LEU TRP GLY SEQRES 14 B 321 ASP SER THR GLY ALA ASN ILE VAL HIS ASN THR LEU ILE SEQRES 15 B 321 ARG SER GLY LYS GLU LYS LEU ASN GLY GLY LYS VAL LYS SEQRES 16 B 321 ILE LEU GLY ALA ILE LEU TYR TYR PRO TYR PHE LEU ILE SEQRES 17 B 321 ARG THR SER SER LYS GLN SER ASP TYR MET GLU ASN GLU SEQRES 18 B 321 TYR ARG SER TYR TRP LYS LEU ALA TYR PRO ASP ALA PRO SEQRES 19 B 321 GLY GLY ASN ASP ASN PRO MET ILE ASN PRO THR ALA GLU SEQRES 20 B 321 ASN ALA PRO ASP LEU ALA GLY TYR GLY CYS SER ARG LEU SEQRES 21 B 321 LEU ILE SER MET VAL ALA ASP GLU ALA ARG ASP ILE THR SEQRES 22 B 321 LEU LEU TYR ILE ASP ALA LEU GLU LYS SER GLY TRP LYS SEQRES 23 B 321 GLY GLU LEU ASP VAL ALA ASP PHE ASP LYS GLN TYR PHE SEQRES 24 B 321 GLU LEU PHE GLU MET GLU THR GLU VAL ALA LYS ASN MET SEQRES 25 B 321 LEU ARG ARG LEU ALA SER PHE ILE LYS HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 8 HET EDO B 401 8 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HET EDO B 405 8 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 11(C2 H6 O2) FORMUL 14 HOH *699(H2 O) HELIX 1 AA1 LYS A 89 LYS A 104 1 16 HELIX 2 AA2 PRO A 121 SER A 136 1 16 HELIX 3 AA3 ASP A 141 THR A 147 5 7 HELIX 4 AA4 ASP A 152 TYR A 158 1 7 HELIX 5 AA5 SER A 170 GLY A 184 1 15 HELIX 6 AA6 LYS A 187 LYS A 192 5 6 HELIX 7 AA7 SER A 214 ASN A 219 1 6 HELIX 8 AA8 ASN A 219 TYR A 229 1 11 HELIX 9 AA9 GLY A 234 ASN A 238 5 5 HELIX 10 AB1 ASP A 250 TYR A 254 5 5 HELIX 11 AB2 GLU A 267 GLY A 283 1 17 HELIX 12 AB3 GLN A 296 GLU A 302 5 7 HELIX 13 AB4 THR A 305 SER A 317 1 13 HELIX 14 AB5 LYS B 89 LYS B 104 1 16 HELIX 15 AB6 PRO B 121 SER B 136 1 16 HELIX 16 AB7 ASP B 141 THR B 147 5 7 HELIX 17 AB8 ASP B 152 TYR B 158 1 7 HELIX 18 AB9 SER B 170 GLU B 186 1 17 HELIX 19 AC1 LYS B 187 LYS B 192 5 6 HELIX 20 AC2 SER B 214 ASN B 219 1 6 HELIX 21 AC3 ASN B 219 TYR B 229 1 11 HELIX 22 AC4 GLY B 234 ASN B 238 5 5 HELIX 23 AC5 ASP B 250 TYR B 254 5 5 HELIX 24 AC6 ALA B 268 SER B 282 1 15 HELIX 25 AC7 GLN B 296 GLU B 302 5 7 HELIX 26 AC8 THR B 305 SER B 317 1 13 SHEET 1 AA1 3 THR A 7 LEU A 11 0 SHEET 2 AA1 3 ILE A 15 PHE A 18 -1 O ILE A 15 N LEU A 11 SHEET 3 AA1 3 VAL A 23 ARG A 25 -1 O GLU A 24 N LYS A 16 SHEET 1 AA2 8 SER A 45 PRO A 50 0 SHEET 2 AA2 8 SER A 56 LEU A 61 -1 O ILE A 59 N LYS A 47 SHEET 3 AA2 8 ILE A 106 GLU A 111 -1 O GLU A 111 N SER A 56 SHEET 4 AA2 8 LEU A 71 PHE A 77 1 N ILE A 74 O ILE A 106 SHEET 5 AA2 8 ALA A 159 ASP A 169 1 O TYR A 165 N ILE A 73 SHEET 6 AA2 8 GLY A 197 TYR A 201 1 O TYR A 201 N GLY A 168 SHEET 7 AA2 8 ARG A 258 MET A 263 1 O LEU A 260 N LEU A 200 SHEET 8 AA2 8 GLU A 287 ASP A 292 1 O ASP A 289 N LEU A 259 SHEET 1 AA3 3 THR B 7 LEU B 11 0 SHEET 2 AA3 3 ILE B 15 PHE B 18 -1 O VAL B 17 N PHE B 9 SHEET 3 AA3 3 VAL B 23 GLU B 24 -1 O GLU B 24 N LYS B 16 SHEET 1 AA4 8 SER B 45 PRO B 50 0 SHEET 2 AA4 8 SER B 56 LEU B 61 -1 O ILE B 59 N LYS B 47 SHEET 3 AA4 8 ILE B 106 GLU B 111 -1 O GLU B 111 N SER B 56 SHEET 4 AA4 8 LEU B 71 PHE B 77 1 N ILE B 74 O ILE B 106 SHEET 5 AA4 8 ALA B 159 ASP B 169 1 O TYR B 165 N ILE B 73 SHEET 6 AA4 8 GLY B 197 TYR B 201 1 O TYR B 201 N GLY B 168 SHEET 7 AA4 8 ARG B 258 MET B 263 1 O LEU B 260 N LEU B 200 SHEET 8 AA4 8 GLU B 287 ASP B 292 1 O ASP B 289 N LEU B 259 CISPEP 1 PRO A 12 PRO A 13 0 -2.79 CISPEP 2 ALA A 115 PRO A 116 0 -1.24 CISPEP 3 LEU A 120 PRO A 121 0 10.53 CISPEP 4 PRO B 12 PRO B 13 0 -3.40 CISPEP 5 ALA B 115 PRO B 116 0 -4.05 CISPEP 6 LEU B 120 PRO B 121 0 9.39 SITE 1 AC1 7 GLY A 81 SER A 170 THR A 171 TYR A 204 SITE 2 AC1 7 HOH A 505 HOH A 697 HOH A 733 SITE 1 AC2 5 SER A 28 GLU A 85 LYS A 89 EDO A 403 SITE 2 AC2 5 HOH A 587 SITE 1 AC3 7 TYR A 31 SER A 86 LYS A 89 EDO A 402 SITE 2 AC3 7 HOH A 720 HOH A 729 TYR B 31 SITE 1 AC4 8 HIS A 137 VAL A 138 GLY A 139 LEU A 140 SITE 2 AC4 8 ILE A 156 PHE A 161 HOH A 510 HOH A 702 SITE 1 AC5 7 LEU A 206 ILE A 207 ARG A 208 ARG A 222 SITE 2 AC5 7 ASN A 236 ASP A 237 HOH A 633 SITE 1 AC6 10 GLU A 129 GLN A 132 TRP A 133 SER A 136 SITE 2 AC6 10 LYS A 151 HOH A 507 HOH A 521 HOH A 522 SITE 3 AC6 10 HOH A 537 HOH A 547 SITE 1 AC7 11 GLY B 81 SER B 170 THR B 171 TYR B 202 SITE 2 AC7 11 TYR B 204 TYR B 221 TYR B 224 HOH B 509 SITE 3 AC7 11 HOH B 556 HOH B 565 HOH B 632 SITE 1 AC8 5 PRO A 30 TYR A 31 HOH A 729 LYS B 89 SITE 2 AC8 5 HOH B 569 SITE 1 AC9 7 HIS B 137 VAL B 138 GLY B 139 LEU B 140 SITE 2 AC9 7 PHE B 161 HOH B 547 HOH B 715 SITE 1 AD1 5 ARG B 25 SER B 86 LYS B 89 HOH B 520 SITE 2 AD1 5 HOH B 607 SITE 1 AD2 10 GLU B 129 GLN B 132 TRP B 133 SER B 136 SITE 2 AD2 10 LYS B 151 HOH B 506 HOH B 511 HOH B 527 SITE 3 AD2 10 HOH B 528 HOH B 553 CRYST1 56.485 108.962 63.235 90.00 108.54 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017704 0.000000 0.005937 0.00000 SCALE2 0.000000 0.009178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016680 0.00000