HEADER PROTEIN BINDING 29-MAY-19 6RUW TITLE ZN-SUBSTITUTED ALPHA-KEGGIN BOUND TO PROTEINASE K SOLVED BY MR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEINASE K; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENDOPEPTIDASE K,TRITIRACHIUM ALKALINE PROTEINASE; COMPND 5 EC: 3.4.21.64 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARENGYODONTIUM ALBUM; SOURCE 3 ORGANISM_TAXID: 37998 KEYWDS POLYOXOMETALATE, COMPLEX, ALPHA-KEGGIN, PROTEINASE K, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.BREIBECK,A.BIJELIC,A.ROMPEL REVDAT 3 24-JAN-24 6RUW 1 LINK REVDAT 2 02-OCT-19 6RUW 1 JRNL REVDAT 1 18-SEP-19 6RUW 0 JRNL AUTH J.BREIBECK,A.BIJELIC,A.ROMPEL JRNL TITL TRANSITION METAL-SUBSTITUTED KEGGIN POLYOXOTUNGSTATES JRNL TITL 2 ENABLING COVALENT ATTACHMENT TO PROTEINASE K UPON JRNL TITL 3 CO-CRYSTALLIZATION. JRNL REF CHEM.COMMUN.(CAMB.) V. 55 11519 2019 JRNL REFN ESSN 1364-548X JRNL PMID 31490500 JRNL DOI 10.1039/C9CC05818D REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 92750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.0477 - 4.1878 0.99 3154 173 0.1803 0.1638 REMARK 3 2 4.1878 - 3.3268 1.00 3167 172 0.1229 0.1535 REMARK 3 3 3.3268 - 2.9070 1.00 3175 157 0.1326 0.1513 REMARK 3 4 2.9070 - 2.6416 1.00 3202 163 0.1381 0.1660 REMARK 3 5 2.6416 - 2.4525 1.00 3149 168 0.1389 0.1637 REMARK 3 6 2.4525 - 2.3080 1.00 3173 166 0.1311 0.1629 REMARK 3 7 2.3080 - 2.1925 0.99 3125 164 0.1282 0.1595 REMARK 3 8 2.1925 - 2.0971 0.99 3176 167 0.1297 0.1543 REMARK 3 9 2.0971 - 2.0164 0.98 3081 168 0.1315 0.1975 REMARK 3 10 2.0164 - 1.9469 0.97 3049 161 0.1357 0.1706 REMARK 3 11 1.9469 - 1.8860 0.96 3045 158 0.1470 0.1617 REMARK 3 12 1.8860 - 1.8321 0.95 3034 160 0.1493 0.1595 REMARK 3 13 1.8321 - 1.7839 0.94 3014 159 0.1497 0.1941 REMARK 3 14 1.7839 - 1.7404 0.94 2985 155 0.1543 0.2230 REMARK 3 15 1.7404 - 1.7009 0.93 2930 155 0.1522 0.2008 REMARK 3 16 1.7009 - 1.6647 0.92 2923 152 0.1527 0.2013 REMARK 3 17 1.6647 - 1.6314 0.92 2930 153 0.1581 0.2076 REMARK 3 18 1.6314 - 1.6006 0.91 2886 153 0.1615 0.1978 REMARK 3 19 1.6006 - 1.5720 0.91 2864 151 0.1638 0.2073 REMARK 3 20 1.5720 - 1.5454 0.90 2843 149 0.1748 0.2196 REMARK 3 21 1.5454 - 1.5204 0.89 2845 150 0.1740 0.2181 REMARK 3 22 1.5204 - 1.4971 0.89 2817 149 0.1625 0.2066 REMARK 3 23 1.4971 - 1.4750 0.88 2773 150 0.1778 0.2079 REMARK 3 24 1.4750 - 1.4543 0.88 2834 154 0.1631 0.2010 REMARK 3 25 1.4543 - 1.4346 0.87 2778 145 0.1764 0.2378 REMARK 3 26 1.4346 - 1.4160 0.87 2708 143 0.1768 0.2171 REMARK 3 27 1.4160 - 1.3983 0.87 2789 147 0.1642 0.2468 REMARK 3 28 1.3983 - 1.3814 0.86 2712 146 0.1707 0.2428 REMARK 3 29 1.3814 - 1.3654 0.83 2644 134 0.1870 0.2410 REMARK 3 30 1.3654 - 1.3500 0.73 2300 123 0.2051 0.2860 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2166 REMARK 3 ANGLE : 0.805 3073 REMARK 3 CHIRALITY : 0.068 316 REMARK 3 PLANARITY : 0.005 375 REMARK 3 DIHEDRAL : 14.108 735 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RUW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102641. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92760 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 24.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.03601 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1IC6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE (PH 5.5), 0.7 REMARK 280 -1.2 M AMMONIUM SULPHATE, 2.5 MM ZN-SUBSTITUTED ALPHA-KEGGIN, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.07000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.96000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.96000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.60500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.96000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.96000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.53500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.96000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.96000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.60500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.96000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.96000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.53500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.07000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 587 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 54 O HOH A 401 1.29 REMARK 500 HD22 ASN A 276 O HOH A 409 1.53 REMARK 500 OE1 GLN A 89 O HOH A 401 1.83 REMARK 500 O HOH A 411 O HOH A 517 1.87 REMARK 500 O HOH A 432 O HOH A 739 1.92 REMARK 500 O HOH A 407 O HOH A 590 1.93 REMARK 500 O HOH A 475 O HOH A 645 1.95 REMARK 500 O HOH A 676 O HOH A 784 1.98 REMARK 500 OE1 GLN A 54 O HOH A 402 1.99 REMARK 500 O HOH A 645 O HOH A 659 2.00 REMARK 500 O HOH A 745 O HOH A 764 2.00 REMARK 500 O HOH A 676 O HOH A 687 2.01 REMARK 500 O HOH A 741 O HOH A 767 2.03 REMARK 500 O HOH A 427 O HOH A 494 2.03 REMARK 500 NE2 GLN A 54 O HOH A 401 2.03 REMARK 500 O HOH A 434 O HOH A 755 2.04 REMARK 500 O HOH A 427 O HOH A 771 2.06 REMARK 500 O HOH A 761 O HOH A 763 2.07 REMARK 500 O HOH A 445 O HOH A 716 2.07 REMARK 500 O HOH A 723 O HOH A 749 2.08 REMARK 500 O HOH A 750 O HOH A 758 2.09 REMARK 500 O HOH A 639 O HOH A 702 2.10 REMARK 500 O HOH A 797 O HOH A 804 2.10 REMARK 500 O HOH A 604 O HOH A 770 2.12 REMARK 500 O73 KK5 A 301 O HOH A 403 2.12 REMARK 500 O HOH A 473 O HOH A 745 2.16 REMARK 500 O HOH A 729 O HOH A 755 2.16 REMARK 500 O HOH A 678 O HOH A 702 2.18 REMARK 500 O HOH A 462 O HOH A 659 2.18 REMARK 500 O HOH A 572 O HOH A 769 2.19 REMARK 500 O HOH A 770 O HOH A 785 2.19 REMARK 500 O HOH A 792 O HOH A 806 2.19 REMARK 500 NE2 GLN A 103 O HOH A 404 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 416 O HOH A 416 8665 1.83 REMARK 500 O HOH A 711 O HOH A 726 6565 1.91 REMARK 500 O HOH A 730 O HOH A 739 4565 1.92 REMARK 500 O HOH A 745 O HOH A 745 8665 2.04 REMARK 500 O HOH A 708 O HOH A 763 3644 2.05 REMARK 500 O HOH A 684 O HOH A 773 8665 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 -148.80 -169.73 REMARK 500 ASP A 207 60.61 61.98 REMARK 500 ASN A 270 76.36 -108.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KK5 A 301 W13 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 63 OG REMARK 620 2 KK5 A 301 O41 114.0 REMARK 620 3 KK5 A 301 O42 47.7 108.9 REMARK 620 4 KK5 A 301 O44 148.6 84.4 103.5 REMARK 620 5 KK5 A 301 O45 86.5 155.1 95.4 84.4 REMARK 620 6 KK5 A 301 O60 132.8 83.9 166.1 71.6 71.4 REMARK 620 7 KK5 A 301 O76 60.5 90.8 107.6 148.4 87.2 76.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KK5 A 301 W22 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 403 O REMARK 620 2 KK5 A 301 O62 100.7 REMARK 620 3 KK5 A 301 O67 118.8 88.6 REMARK 620 4 KK5 A 301 O68 155.4 84.2 85.2 REMARK 620 5 KK5 A 301 O69 72.4 68.5 156.6 87.4 REMARK 620 6 KK5 A 301 O73 40.5 69.9 91.6 154.0 85.4 REMARK 620 7 KK5 A 301 O74 69.1 168.2 101.4 102.6 101.9 103.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KK5 A 301 W18 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 405 O REMARK 620 2 KK5 A 301 O55 51.7 REMARK 620 3 KK5 A 301 O56 66.3 100.5 REMARK 620 4 KK5 A 301 O57 133.9 156.4 101.9 REMARK 620 5 KK5 A 301 O61 105.4 69.4 169.9 88.0 REMARK 620 6 KK5 A 301 O67 55.5 85.0 97.8 84.6 81.0 REMARK 620 7 KK5 A 301 O78 134.5 89.8 105.4 91.4 75.9 156.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KK5 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6RUK RELATED DB: PDB REMARK 900 RELATED ID: 6RUH RELATED DB: PDB REMARK 900 RELATED ID: 6RUG RELATED DB: PDB REMARK 900 RELATED ID: 6RUN RELATED DB: PDB DBREF 6RUW A 1 279 UNP P06873 PRTK_PARAQ 106 384 SEQADV 6RUW ASP A 207 UNP P06873 SER 312 CONFLICT SEQRES 1 A 279 ALA ALA GLN THR ASN ALA PRO TRP GLY LEU ALA ARG ILE SEQRES 2 A 279 SER SER THR SER PRO GLY THR SER THR TYR TYR TYR ASP SEQRES 3 A 279 GLU SER ALA GLY GLN GLY SER CYS VAL TYR VAL ILE ASP SEQRES 4 A 279 THR GLY ILE GLU ALA SER HIS PRO GLU PHE GLU GLY ARG SEQRES 5 A 279 ALA GLN MET VAL LYS THR TYR TYR TYR SER SER ARG ASP SEQRES 6 A 279 GLY ASN GLY HIS GLY THR HIS CYS ALA GLY THR VAL GLY SEQRES 7 A 279 SER ARG THR TYR GLY VAL ALA LYS LYS THR GLN LEU PHE SEQRES 8 A 279 GLY VAL LYS VAL LEU ASP ASP ASN GLY SER GLY GLN TYR SEQRES 9 A 279 SER THR ILE ILE ALA GLY MET ASP PHE VAL ALA SER ASP SEQRES 10 A 279 LYS ASN ASN ARG ASN CYS PRO LYS GLY VAL VAL ALA SER SEQRES 11 A 279 LEU SER LEU GLY GLY GLY TYR SER SER SER VAL ASN SER SEQRES 12 A 279 ALA ALA ALA ARG LEU GLN SER SER GLY VAL MET VAL ALA SEQRES 13 A 279 VAL ALA ALA GLY ASN ASN ASN ALA ASP ALA ARG ASN TYR SEQRES 14 A 279 SER PRO ALA SER GLU PRO SER VAL CYS THR VAL GLY ALA SEQRES 15 A 279 SER ASP ARG TYR ASP ARG ARG SER SER PHE SER ASN TYR SEQRES 16 A 279 GLY SER VAL LEU ASP ILE PHE GLY PRO GLY THR ASP ILE SEQRES 17 A 279 LEU SER THR TRP ILE GLY GLY SER THR ARG SER ILE SER SEQRES 18 A 279 GLY THR SER MET ALA THR PRO HIS VAL ALA GLY LEU ALA SEQRES 19 A 279 ALA TYR LEU MET THR LEU GLY LYS THR THR ALA ALA SER SEQRES 20 A 279 ALA CYS ARG TYR ILE ALA ASP THR ALA ASN LYS GLY ASP SEQRES 21 A 279 LEU SER ASN ILE PRO PHE GLY THR VAL ASN LEU LEU ALA SEQRES 22 A 279 TYR ASN ASN TYR GLN ALA HET KK5 A 301 52 HET SO4 A 302 5 HETNAM KK5 ZN-SUBSTITUTED ALPHA-KEGGIN HETNAM SO4 SULFATE ION FORMUL 2 KK5 O39 P W11 ZN FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *414(H2 O) HELIX 1 AA1 PRO A 7 SER A 14 1 8 HELIX 2 AA2 HIS A 46 GLU A 50 5 5 HELIX 3 AA3 GLY A 68 SER A 79 1 12 HELIX 4 AA4 GLN A 103 LYS A 118 1 16 HELIX 5 AA5 ASN A 119 ARG A 121 5 3 HELIX 6 AA6 SER A 138 SER A 151 1 14 HELIX 7 AA7 ASP A 165 ARG A 167 5 3 HELIX 8 AA8 GLY A 222 LEU A 240 1 19 HELIX 9 AA9 SER A 247 ALA A 256 1 10 SHEET 1 AA1 2 ALA A 2 GLN A 3 0 SHEET 2 AA1 2 TYR A 23 TYR A 24 -1 O TYR A 23 N GLN A 3 SHEET 1 AA2 7 ALA A 53 THR A 58 0 SHEET 2 AA2 7 GLN A 89 LYS A 94 1 O GLY A 92 N GLN A 54 SHEET 3 AA2 7 SER A 33 ASP A 39 1 N VAL A 35 O GLN A 89 SHEET 4 AA2 7 GLY A 126 LEU A 131 1 O SER A 130 N TYR A 36 SHEET 5 AA2 7 VAL A 153 ALA A 158 1 O MET A 154 N ALA A 129 SHEET 6 AA2 7 CYS A 178 SER A 183 1 O CYS A 178 N VAL A 157 SHEET 7 AA2 7 ILE A 201 PRO A 204 1 O ILE A 201 N GLY A 181 SHEET 1 AA3 2 GLY A 135 GLY A 136 0 SHEET 2 AA3 2 TYR A 169 SER A 170 -1 O SER A 170 N GLY A 135 SHEET 1 AA4 2 ILE A 208 TRP A 212 0 SHEET 2 AA4 2 SER A 216 ILE A 220 -1 O ILE A 220 N ILE A 208 SHEET 1 AA5 2 ASN A 257 LYS A 258 0 SHEET 2 AA5 2 LEU A 271 LEU A 272 -1 O LEU A 272 N ASN A 257 SSBOND 1 CYS A 34 CYS A 123 1555 1555 2.03 SSBOND 2 CYS A 178 CYS A 249 1555 1555 2.03 LINK OG ASER A 63 W13 KK5 A 301 1555 1555 3.00 LINK W22 KK5 A 301 O HOH A 403 1555 1555 3.17 LINK W18 KK5 A 301 O HOH A 405 1555 1555 2.79 CISPEP 1 SER A 170 PRO A 171 0 2.48 SITE 1 AC1 16 GLU A 43 ALA A 44 SER A 45 GLN A 54 SITE 2 AC1 16 MET A 55 SER A 63 ARG A 64 GLY A 259 SITE 3 AC1 16 ASN A 270 HOH A 403 HOH A 405 HOH A 406 SITE 4 AC1 16 HOH A 407 HOH A 423 HOH A 530 HOH A 535 SITE 1 AC2 9 PRO A 7 TRP A 8 ARG A 185 HOH A 438 SITE 2 AC2 9 HOH A 457 HOH A 509 HOH A 532 HOH A 614 SITE 3 AC2 9 HOH A 665 CRYST1 67.920 67.920 102.140 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014723 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014723 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009790 0.00000