HEADER TRANSFERASE 31-MAY-19 6RV5 TITLE X-RAY STRUCTURE OF THE LEVANSUCRASE FROM ERWINIA TASMANIENSIS IN TITLE 2 COMPLEX WITH LEVANBIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEVANSUCRASE (BETA-D-FRUCTOFURANOSYL TRANSFERASE); COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.1.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ERWINIA TASMANIENSIS (STRAIN DSM 17950 / CIP SOURCE 3 109463 / ET1/99); SOURCE 4 ORGANISM_TAXID: 465817; SOURCE 5 STRAIN: DSM 17950 / CIP 109463 / ET1/99; SOURCE 6 GENE: LSC, ETA_34670; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LEVANSUCRASE, LEVANBIOSE, FRUCTOSYLTRANSFERASE, FRUCTANS PRODUCTION., KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.POLSINELLI,R.CALIANDRO,N.DEMITRI,S.BENINI REVDAT 5 31-JAN-24 6RV5 1 REMARK REVDAT 4 21-DEC-22 6RV5 1 REMARK HETSYN REVDAT 3 29-JUL-20 6RV5 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 08-APR-20 6RV5 1 JRNL REVDAT 1 01-APR-20 6RV5 0 JRNL AUTH I.POLSINELLI,R.CALIANDRO,N.DEMITRI,S.BENINI JRNL TITL THE STRUCTURE OF SUCROSE-SOAKED LEVANSUCRASE CRYSTALS JRNL TITL 2 FROMERWINIA TASMANIENSISREVEALS A BINDING POCKET FOR JRNL TITL 3 LEVANBIOSE. JRNL REF INT J MOL SCI V. 21 2019 JRNL REFN ESSN 1422-0067 JRNL PMID 31877648 JRNL DOI 10.3390/IJMS21010083 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.POLSINELLI,R.CALIANDRO,M.SALOMONE-STAGNI,N.DEMITRI, REMARK 1 AUTH 2 M.REJZEK,R.A.FIELD,S.BENINI REMARK 1 TITL COMPARISON OF THE LEVANSUCRASE FROM THE EPIPHYTE ERWINIA REMARK 1 TITL 2 TASMANIENSIS VS ITS HOMOLOGUE FROM THE PHYTOPATHOGEN ERWINIA REMARK 1 TITL 3 AMYLOVORA. REMARK 1 REF INT.J.BIOL.MACROMOL. V. 127 496 2019 REMARK 1 REFN ISSN 0141-8130 REMARK 1 PMID 30660564 REMARK 1 DOI 10.1016/J.IJBIOMAC.2019.01.074 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 62914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3263 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : 0.2902 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3258 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 407 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6RV5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102664. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66162 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 90.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 1.300 REMARK 200 R MERGE (I) : 0.02668 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.28670 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6FRW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% GLYCEROL, 14% PEG 4000, 1.5MM REMARK 280 MANGANESE(II) CHLORIDE TETRAHYDRATE, 1.5 MM COBALT(II) CHLORIDE REMARK 280 HEXAHYDRATE , 1.5 MM NICKEL(II) CHLORIDE HEXAHYDRATE, 1.5 MM REMARK 280 ZINC ACETATE DIHYDRATE CRYSTALS SOAKED IN SUCROSE 500 MM, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.13400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.94300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.94300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.56700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.94300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.94300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.70100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.94300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.94300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.56700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.94300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.94300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.70100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 29.13400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 839 O HOH A 969 2.08 REMARK 500 O HOH A 956 O HOH A 982 2.15 REMARK 500 O HOH A 890 O HOH A 908 2.16 REMARK 500 O HOH A 638 O HOH A 972 2.16 REMARK 500 O HOH A 679 O HOH A 945 2.16 REMARK 500 OD2 ASP A 317 O HOH A 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE A 44 N ILE A 44 CA 0.175 REMARK 500 ILE A 44 N ILE A 44 CA 0.174 REMARK 500 GLU A 287 CD GLU A 287 OE2 -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 34 30.83 -89.61 REMARK 500 TRP A 45 -93.73 -128.49 REMARK 500 ASN A 74 41.07 -95.48 REMARK 500 THR A 152 96.28 72.12 REMARK 500 PHE A 201 104.28 -160.68 REMARK 500 ASP A 203 65.64 74.21 REMARK 500 VAL A 282 -59.93 -126.74 REMARK 500 SER A 336 -12.07 67.02 REMARK 500 ASP A 367 -78.22 -106.20 REMARK 500 TRP A 371 -81.71 -119.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1007 DISTANCE = 5.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 512 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD2 REMARK 620 2 ASP A 54 OD2 110.2 REMARK 620 3 ASP A 56 OD2 111.0 123.8 REMARK 620 4 HOH A 866 O 104.1 102.8 102.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 513 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 140 OD1 REMARK 620 2 GLU A 141 OE1 91.9 REMARK 620 3 GLU A 141 OE2 88.9 56.3 REMARK 620 4 HIS A 178 ND1 98.5 71.3 17.9 REMARK 620 5 HOH A 865 O 175.2 84.9 86.4 77.1 REMARK 620 6 HOH A 923 O 100.7 100.6 155.5 159.4 83.4 REMARK 620 N 1 2 3 4 5 DBREF 6RV5 A 4 415 UNP B2VCC3 B2VCC3_ERWT9 4 415 SEQRES 1 A 412 PHE ASN TYR LYS PRO THR PRO TRP THR ARG ALA ASP ALA SEQRES 2 A 412 LEU LYS VAL HIS SER ASP ASP PRO THR THR THR GLN PRO SEQRES 3 A 412 LEU VAL ASP VAL ALA PHE PRO VAL MET SER GLU GLU VAL SEQRES 4 A 412 PHE ILE TRP ASP THR MET PRO LEU ARG ASP PHE ASP GLY SEQRES 5 A 412 ASP ILE VAL SER VAL ASN GLY TRP CYS VAL ILE PHE THR SEQRES 6 A 412 LEU THR ALA ASP ARG ASN THR ASN ASN PRO ASP PHE GLN SEQRES 7 A 412 ASP GLU ASN GLY ASN TYR ASP ILE LYS ARG ASP TRP GLU SEQRES 8 A 412 ASP ARG HIS GLY ARG ALA ARG ILE CYS TYR TRP TYR SER SEQRES 9 A 412 ARG THR GLY LYS ASP TRP ILE PHE GLY GLY ARG VAL MET SEQRES 10 A 412 ALA GLU GLY VAL SER PRO THR THR ARG GLU TRP ALA GLY SEQRES 11 A 412 THR PRO ILE LEU LEU ASN ASP GLU GLY ASP ILE ASP LEU SEQRES 12 A 412 TYR TYR THR CYS VAL THR PRO GLY ALA THR ILE ALA LYS SEQRES 13 A 412 VAL ARG GLY LYS ILE VAL THR SER ASP GLU GLY VAL SER SEQRES 14 A 412 LEU GLU GLY PHE GLN HIS VAL LYS SER LEU PHE SER ALA SEQRES 15 A 412 ASP GLY LYS ILE TYR GLN THR GLU GLU GLN ASN ALA TYR SEQRES 16 A 412 TRP ASN PHE ARG ASP PRO SER PRO PHE ILE ASP LYS ASN SEQRES 17 A 412 ASP GLY LYS LEU TYR MET LEU PHE GLU GLY ASN VAL ALA SEQRES 18 A 412 GLY SER ARG GLY THR HIS GLU ILE THR GLN GLU ASP MET SEQRES 19 A 412 GLY SER VAL PRO PRO GLY TYR GLU ASN VAL GLY GLY ALA SEQRES 20 A 412 ARG TYR GLN VAL GLY CYS ILE GLY LEU ALA VAL ALA LYS SEQRES 21 A 412 ASP LEU SER GLY ASP GLU TRP GLU ILE LEU PRO PRO LEU SEQRES 22 A 412 ILE THR ALA VAL GLY VAL ASN ASP GLN THR GLU ARG PRO SEQRES 23 A 412 HIS PHE VAL PHE GLN GLU GLY LYS TYR TYR LEU PHE THR SEQRES 24 A 412 ILE SER HIS LYS TYR THR PHE ALA ASP ASN LEU THR GLY SEQRES 25 A 412 PRO ASP GLY VAL TYR GLY PHE VAL SER ASN GLN LEU THR SEQRES 26 A 412 GLY PRO TYR THR PRO MET ASN SER SER GLY LEU VAL LEU SEQRES 27 A 412 GLY ASN PRO SER SER GLN PRO PHE GLN THR TYR SER HIS SEQRES 28 A 412 TYR VAL MET PRO ASN GLY LEU VAL THR SER PHE ILE ASP SEQRES 29 A 412 SER VAL PRO TRP GLU GLY GLU LYS PHE ARG ILE GLY GLY SEQRES 30 A 412 THR GLU ALA PRO THR VAL LYS ILE LEU LEU LYS GLY ASP SEQRES 31 A 412 ARG SER PHE VAL VAL ASP SER PHE ASP TYR GLY TYR ILE SEQRES 32 A 412 PRO ALA MET LYS ASP ILE ILE LEU LYS HET FRU B 1 12 HET FRU B 2 11 HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 12 HET GOL A 506 6 HET GOL A 507 6 HET GOL A 508 6 HET GOL A 509 6 HET GOL A 510 6 HET GOL A 511 6 HET ZN A 512 1 HET ZN A 513 1 HETNAM FRU BETA-D-FRUCTOFURANOSE HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN FRU BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FRU 2(C6 H12 O6) FORMUL 3 GOL 11(C3 H8 O3) FORMUL 14 ZN 2(ZN 2+) FORMUL 16 HOH *407(H2 O) HELIX 1 AA1 THR A 12 LYS A 18 1 7 HELIX 2 AA2 ASP A 23 THR A 27 5 5 HELIX 3 AA3 ASN A 77 GLN A 81 5 5 HELIX 4 AA4 ASP A 88 ASP A 95 1 8 HELIX 5 AA5 ARG A 96 ALA A 100 5 5 HELIX 6 AA6 THR A 233 GLY A 238 1 6 HELIX 7 AA7 GLY A 249 GLN A 253 5 5 HELIX 8 AA8 HIS A 305 PHE A 309 5 5 HELIX 9 AA9 ASN A 335 SER A 337 5 3 SHEET 1 AA1 5 THR A 9 PRO A 10 0 SHEET 2 AA1 5 TRP A 270 THR A 278 1 O LEU A 276 N THR A 9 SHEET 3 AA1 5 GLY A 255 ALA A 262 -1 N VAL A 261 O GLU A 271 SHEET 4 AA1 5 LEU A 215 ASN A 222 -1 N LEU A 215 O ALA A 262 SHEET 5 AA1 5 ARG A 202 ILE A 208 -1 N PHE A 207 O TYR A 216 SHEET 1 AA2 4 VAL A 42 PRO A 49 0 SHEET 2 AA2 4 CYS A 64 ASP A 72 -1 O PHE A 67 N MET A 48 SHEET 3 AA2 4 ARG A 101 SER A 107 -1 O CYS A 103 N THR A 68 SHEET 4 AA2 4 ILE A 114 ARG A 118 -1 O GLY A 116 N TYR A 104 SHEET 1 AA3 2 VAL A 58 VAL A 60 0 SHEET 2 AA3 2 LYS A 410 ILE A 412 1 O ILE A 412 N SER A 59 SHEET 1 AA4 4 ARG A 129 LEU A 137 0 SHEET 2 AA4 4 ASP A 143 VAL A 151 -1 O TYR A 147 N THR A 134 SHEET 3 AA4 4 ALA A 155 SER A 167 -1 O THR A 156 N CYS A 150 SHEET 4 AA4 4 GLY A 170 GLU A 174 -1 O SER A 172 N VAL A 165 SHEET 1 AA5 4 ARG A 129 LEU A 137 0 SHEET 2 AA5 4 ASP A 143 VAL A 151 -1 O TYR A 147 N THR A 134 SHEET 3 AA5 4 ALA A 155 SER A 167 -1 O THR A 156 N CYS A 150 SHEET 4 AA5 4 VAL A 179 SER A 184 -1 O LYS A 180 N LYS A 159 SHEET 1 AA6 4 GLU A 287 GLN A 294 0 SHEET 2 AA6 4 LYS A 297 SER A 304 -1 O PHE A 301 N HIS A 290 SHEET 3 AA6 4 GLY A 318 SER A 324 -1 O TYR A 320 N THR A 302 SHEET 4 AA6 4 THR A 332 PRO A 333 -1 O THR A 332 N VAL A 323 SHEET 1 AA7 4 GLU A 287 GLN A 294 0 SHEET 2 AA7 4 LYS A 297 SER A 304 -1 O PHE A 301 N HIS A 290 SHEET 3 AA7 4 GLY A 318 SER A 324 -1 O TYR A 320 N THR A 302 SHEET 4 AA7 4 LEU A 339 GLY A 342 -1 O LEU A 341 N VAL A 319 SHEET 1 AA8 3 THR A 351 VAL A 356 0 SHEET 2 AA8 3 LEU A 361 PRO A 370 -1 O PHE A 365 N TYR A 352 SHEET 3 AA8 3 PHE A 376 GLU A 382 -1 O THR A 381 N ILE A 366 SHEET 1 AA9 4 THR A 351 VAL A 356 0 SHEET 2 AA9 4 LEU A 361 PRO A 370 -1 O PHE A 365 N TYR A 352 SHEET 3 AA9 4 PRO A 384 LYS A 391 -1 O VAL A 386 N VAL A 362 SHEET 4 AA9 4 ARG A 394 TYR A 403 -1 O PHE A 401 N THR A 385 LINK O6 FRU B 1 C2 FRU B 2 1555 1555 1.40 LINK OD2 ASP A 52 ZN ZN A 512 1555 1555 1.99 LINK OD2 ASP A 54 ZN ZN A 512 1555 1555 2.15 LINK OD2 ASP A 56 ZN ZN A 512 1555 1555 2.22 LINK OD1 ASP A 140 ZN ZN A 513 1555 1555 2.07 LINK OE1 GLU A 141 ZN ZN A 513 1555 1555 2.04 LINK OE2 GLU A 141 ZN ZN A 513 1555 1555 2.60 LINK ND1 HIS A 178 ZN ZN A 513 1555 4554 2.07 LINK ZN ZN A 512 O HOH A 866 1555 1555 2.07 LINK ZN ZN A 513 O HOH A 865 1555 1555 2.31 LINK ZN ZN A 513 O HOH A 923 1555 1555 2.14 CISPEP 1 THR A 152 PRO A 153 0 6.27 CISPEP 2 GLY A 329 PRO A 330 0 5.38 CRYST1 127.886 127.886 58.268 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007819 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017162 0.00000