data_6RV6 # _entry.id 6RV6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6RV6 WWPDB D_1292102658 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6RV6 _pdbx_database_status.recvd_initial_deposition_date 2019-05-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pedersen, D.V.' 1 ? 'Andersen, G.R.' 2 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? CH ? ? primary 'Front Immunol' ? ? 1664-3224 ? ? 10 ? 2007 2007 'Structural Basis for Properdin Oligomerization and Convertase Stimulation in the Human Complement System.' 2019 ? 10.3389/fimmu.2019.02007 31507604 ? ? ? ? ? ? ? ? NE ? ? 1 'Febs Lett.' FEBLAL 0165 0014-5793 ? ? ? ? ? ? 'Crystal structure of peptide-bound neprilysin reveals key binding interactions.' 2019 ? 10.1002/1873-3468.13602 31514225 ? ? ? ? ? ? ? ? US ? ? 2 'Acta Crystallogr F Struct Biol Commun' ACSFEN ? 2053-230X ? ? 75 ? 0 ? 'Crystallization and X-ray analysis of monodisperse human properdin.' 2019 ? 10.1107/S2053230X18018150 30713161 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pedersen, D.V.' 1 ? primary 'Gadeberg, T.A.F.' 2 ? primary 'Thomas, C.' 3 ? primary 'Wang, Y.' 4 ? primary 'Joram, N.' 5 ? primary 'Jensen, R.K.' 6 ? primary 'Mazarakis, S.M.M.' 7 ? primary 'Revel, M.' 8 ? primary 'El Sissy, C.' 9 ? primary 'Petersen, S.V.' 10 ? primary 'Lindorff-Larsen, K.' 11 ? primary 'Thiel, S.' 12 ? primary 'Laursen, N.S.' 13 ? primary 'Fremeaux-Bacchi, V.' 14 ? primary 'Andersen, G.R.' 15 ? 1 'Moss, S.' 16 ? 1 'Subramanian, V.' 17 ? 1 'Acharya, K.R.' 18 0000-0002-3009-4058 2 'Pedersen, D.V.' 19 ? 2 'Revel, M.' 20 ? 2 'Gadeberg, T.A.F.' 21 ? 2 'Andersen, G.R.' 22 0000-0001-6292-3319 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6RV6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 219.790 _cell.length_a_esd ? _cell.length_b 219.790 _cell.length_b_esd ? _cell.length_c 47.440 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Properdin 18636.939 1 ? ? ? 'TB-TSR1-TSR2 and additional residues from expression vector' 2 polymer man Properdin 24724.129 1 ? ? ? 'TSR4-5-6 with addiotional residues from expression vector' 3 branched man 'beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose' 326.297 3 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? 5 non-polymer man alpha-D-mannopyranose 180.156 12 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Complement factor P' 2 'Complement factor P' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DPVLCFTQYEESSGKCKGLLGGGVSVEDCCLNTAFAYQKRSGGLCQPCRSPRWSLWSTWAPCSVTCSEGSQLRYRRCVGW NGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQ QVCPENLYFQ ; ;DPVLCFTQYEESSGKCKGLLGGGVSVEDCCLNTAFAYQKRSGGLCQPCRSPRWSLWSTWAPCSVTCSEGSQLRYRRCVGW NGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQ QVCPENLYFQ ; A ? 2 'polypeptide(L)' no no ;GVAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKS ISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKY PPTVSMVEGQGEKNVTFWGRPLPRCEELQGQKLVVEEKRPCLHVPACKDPEEEELENLYFQ ; ;GVAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKS ISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKY PPTVSMVEGQGEKNVTFWGRPLPRCEELQGQKLVVEEKRPCLHVPACKDPEEEELENLYFQ ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 VAL n 1 4 LEU n 1 5 CYS n 1 6 PHE n 1 7 THR n 1 8 GLN n 1 9 TYR n 1 10 GLU n 1 11 GLU n 1 12 SER n 1 13 SER n 1 14 GLY n 1 15 LYS n 1 16 CYS n 1 17 LYS n 1 18 GLY n 1 19 LEU n 1 20 LEU n 1 21 GLY n 1 22 GLY n 1 23 GLY n 1 24 VAL n 1 25 SER n 1 26 VAL n 1 27 GLU n 1 28 ASP n 1 29 CYS n 1 30 CYS n 1 31 LEU n 1 32 ASN n 1 33 THR n 1 34 ALA n 1 35 PHE n 1 36 ALA n 1 37 TYR n 1 38 GLN n 1 39 LYS n 1 40 ARG n 1 41 SER n 1 42 GLY n 1 43 GLY n 1 44 LEU n 1 45 CYS n 1 46 GLN n 1 47 PRO n 1 48 CYS n 1 49 ARG n 1 50 SER n 1 51 PRO n 1 52 ARG n 1 53 TRP n 1 54 SER n 1 55 LEU n 1 56 TRP n 1 57 SER n 1 58 THR n 1 59 TRP n 1 60 ALA n 1 61 PRO n 1 62 CYS n 1 63 SER n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 SER n 1 68 GLU n 1 69 GLY n 1 70 SER n 1 71 GLN n 1 72 LEU n 1 73 ARG n 1 74 TYR n 1 75 ARG n 1 76 ARG n 1 77 CYS n 1 78 VAL n 1 79 GLY n 1 80 TRP n 1 81 ASN n 1 82 GLY n 1 83 GLN n 1 84 CYS n 1 85 SER n 1 86 GLY n 1 87 LYS n 1 88 VAL n 1 89 ALA n 1 90 PRO n 1 91 GLY n 1 92 THR n 1 93 LEU n 1 94 GLU n 1 95 TRP n 1 96 GLN n 1 97 LEU n 1 98 GLN n 1 99 ALA n 1 100 CYS n 1 101 GLU n 1 102 ASP n 1 103 GLN n 1 104 GLN n 1 105 CYS n 1 106 CYS n 1 107 PRO n 1 108 GLU n 1 109 MET n 1 110 GLY n 1 111 GLY n 1 112 TRP n 1 113 SER n 1 114 GLY n 1 115 TRP n 1 116 GLY n 1 117 PRO n 1 118 TRP n 1 119 GLU n 1 120 PRO n 1 121 CYS n 1 122 SER n 1 123 VAL n 1 124 THR n 1 125 CYS n 1 126 SER n 1 127 LYS n 1 128 GLY n 1 129 THR n 1 130 ARG n 1 131 THR n 1 132 ARG n 1 133 ARG n 1 134 ARG n 1 135 ALA n 1 136 CYS n 1 137 ASN n 1 138 HIS n 1 139 PRO n 1 140 ALA n 1 141 PRO n 1 142 LYS n 1 143 CYS n 1 144 GLY n 1 145 GLY n 1 146 HIS n 1 147 CYS n 1 148 PRO n 1 149 GLY n 1 150 GLN n 1 151 ALA n 1 152 GLN n 1 153 GLU n 1 154 SER n 1 155 GLU n 1 156 ALA n 1 157 CYS n 1 158 ASP n 1 159 THR n 1 160 GLN n 1 161 GLN n 1 162 VAL n 1 163 CYS n 1 164 PRO n 1 165 GLU n 1 166 ASN n 1 167 LEU n 1 168 TYR n 1 169 PHE n 1 170 GLN n 2 1 GLY n 2 2 VAL n 2 3 ALA n 2 4 GLY n 2 5 GLY n 2 6 TRP n 2 7 GLY n 2 8 PRO n 2 9 TRP n 2 10 GLY n 2 11 PRO n 2 12 VAL n 2 13 SER n 2 14 PRO n 2 15 CYS n 2 16 PRO n 2 17 VAL n 2 18 THR n 2 19 CYS n 2 20 GLY n 2 21 LEU n 2 22 GLY n 2 23 GLN n 2 24 THR n 2 25 MET n 2 26 GLU n 2 27 GLN n 2 28 ARG n 2 29 THR n 2 30 CYS n 2 31 ASN n 2 32 HIS n 2 33 PRO n 2 34 VAL n 2 35 PRO n 2 36 GLN n 2 37 HIS n 2 38 GLY n 2 39 GLY n 2 40 PRO n 2 41 PHE n 2 42 CYS n 2 43 ALA n 2 44 GLY n 2 45 ASP n 2 46 ALA n 2 47 THR n 2 48 ARG n 2 49 THR n 2 50 HIS n 2 51 ILE n 2 52 CYS n 2 53 ASN n 2 54 THR n 2 55 ALA n 2 56 VAL n 2 57 PRO n 2 58 CYS n 2 59 PRO n 2 60 VAL n 2 61 ASP n 2 62 GLY n 2 63 GLU n 2 64 TRP n 2 65 ASP n 2 66 SER n 2 67 TRP n 2 68 GLY n 2 69 GLU n 2 70 TRP n 2 71 SER n 2 72 PRO n 2 73 CYS n 2 74 ILE n 2 75 ARG n 2 76 ARG n 2 77 ASN n 2 78 MET n 2 79 LYS n 2 80 SER n 2 81 ILE n 2 82 SER n 2 83 CYS n 2 84 GLN n 2 85 GLU n 2 86 ILE n 2 87 PRO n 2 88 GLY n 2 89 GLN n 2 90 GLN n 2 91 SER n 2 92 ARG n 2 93 GLY n 2 94 ARG n 2 95 THR n 2 96 CYS n 2 97 ARG n 2 98 GLY n 2 99 ARG n 2 100 LYS n 2 101 PHE n 2 102 ASP n 2 103 GLY n 2 104 HIS n 2 105 ARG n 2 106 CYS n 2 107 ALA n 2 108 GLY n 2 109 GLN n 2 110 GLN n 2 111 GLN n 2 112 ASP n 2 113 ILE n 2 114 ARG n 2 115 HIS n 2 116 CYS n 2 117 TYR n 2 118 SER n 2 119 ILE n 2 120 GLN n 2 121 HIS n 2 122 CYS n 2 123 PRO n 2 124 LEU n 2 125 LYS n 2 126 GLY n 2 127 SER n 2 128 TRP n 2 129 SER n 2 130 GLU n 2 131 TRP n 2 132 SER n 2 133 THR n 2 134 TRP n 2 135 GLY n 2 136 LEU n 2 137 CYS n 2 138 MET n 2 139 PRO n 2 140 PRO n 2 141 CYS n 2 142 GLY n 2 143 PRO n 2 144 ASN n 2 145 PRO n 2 146 THR n 2 147 ARG n 2 148 ALA n 2 149 ARG n 2 150 GLN n 2 151 ARG n 2 152 LEU n 2 153 CYS n 2 154 THR n 2 155 PRO n 2 156 LEU n 2 157 LEU n 2 158 PRO n 2 159 LYS n 2 160 TYR n 2 161 PRO n 2 162 PRO n 2 163 THR n 2 164 VAL n 2 165 SER n 2 166 MET n 2 167 VAL n 2 168 GLU n 2 169 GLY n 2 170 GLN n 2 171 GLY n 2 172 GLU n 2 173 LYS n 2 174 ASN n 2 175 VAL n 2 176 THR n 2 177 PHE n 2 178 TRP n 2 179 GLY n 2 180 ARG n 2 181 PRO n 2 182 LEU n 2 183 PRO n 2 184 ARG n 2 185 CYS n 2 186 GLU n 2 187 GLU n 2 188 LEU n 2 189 GLN n 2 190 GLY n 2 191 GLN n 2 192 LYS n 2 193 LEU n 2 194 VAL n 2 195 VAL n 2 196 GLU n 2 197 GLU n 2 198 LYS n 2 199 ARG n 2 200 PRO n 2 201 CYS n 2 202 LEU n 2 203 HIS n 2 204 VAL n 2 205 PRO n 2 206 ALA n 2 207 CYS n 2 208 LYS n 2 209 ASP n 2 210 PRO n 2 211 GLU n 2 212 GLU n 2 213 GLU n 2 214 GLU n 2 215 LEU n 2 216 GLU n 2 217 ASN n 2 218 LEU n 2 219 TYR n 2 220 PHE n 2 221 GLN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 170 Human ? 'CFP, PFC' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? HEL293F ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 221 Human ? 'CFP, PFC' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? HEK293F ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PROP_HUMAN P27918 ? 1 ;DPVLCFTQYEESSGKCKGLLGGGVSVEDCCLNTAFAYQKRSGGLCQPCRSPRWSLWSTWAPCSVTCSEGSQLRYRRCVGW NGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQ QVCP ; 28 2 UNP PROP_HUMAN P27918 ? 2 ;VAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSI SCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKYP PTVSMVEGQGEKNVTFWGRPLPRCEELQGQKLVVEEKRPCLHVPACKDPEEEEL ; 256 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6RV6 A 1 ? 164 ? P27918 28 ? 191 ? 28 191 2 2 6RV6 B 2 ? 215 ? P27918 256 ? 469 ? 256 469 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6RV6 GLU A 165 ? UNP P27918 ? ? 'expression tag' 192 1 1 6RV6 ASN A 166 ? UNP P27918 ? ? 'expression tag' 193 2 1 6RV6 LEU A 167 ? UNP P27918 ? ? 'expression tag' 194 3 1 6RV6 TYR A 168 ? UNP P27918 ? ? 'expression tag' 195 4 1 6RV6 PHE A 169 ? UNP P27918 ? ? 'expression tag' 196 5 1 6RV6 GLN A 170 ? UNP P27918 ? ? 'expression tag' 197 6 2 6RV6 GLY B 1 ? UNP P27918 ? ? 'expression tag' 255 7 2 6RV6 GLU B 216 ? UNP P27918 ? ? 'expression tag' 470 8 2 6RV6 ASN B 217 ? UNP P27918 ? ? 'expression tag' 471 9 2 6RV6 LEU B 218 ? UNP P27918 ? ? 'expression tag' 472 10 2 6RV6 TYR B 219 ? UNP P27918 ? ? 'expression tag' 473 11 2 6RV6 PHE B 220 ? UNP P27918 ? ? 'expression tag' 474 12 2 6RV6 GLN B 221 ? UNP P27918 ? ? 'expression tag' 475 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose ? 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6RV6 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 6.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 81.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1.0 M lithium sulfate, 0.1 M sodium acetate pH 4.0, 0.1 M barium chloride ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 2.47968 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 2.47968 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'P13 (MX1)' _diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6RV6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.507 _reflns.d_resolution_low 155 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27811 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.07 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.507 _reflns_shell.d_res_low 3.6 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2051 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6RV6 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.507 _refine.ls_d_res_low 77.707 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27803 _refine.ls_number_reflns_R_free 1354 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.83 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2649 _refine.ls_R_factor_R_free 0.2835 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2641 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'electron density for TB-TSR1-TSR5-TSR6' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.39 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.60 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2958 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 233 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3191 _refine_hist.d_res_high 3.507 _refine_hist.d_res_low 77.707 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 3321 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.384 ? 4572 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 31.650 ? 1460 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.071 ? 498 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 559 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.5070 3.6323 . . 118 2705 99.00 . . . 0.4541 . 0.4514 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6323 3.7777 . . 152 2544 100.00 . . . 0.4500 . 0.3496 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7777 3.9496 . . 133 2731 100.00 . . . 0.2824 . 0.3246 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9496 4.1579 . . 116 2599 100.00 . . . 0.2596 . 0.3299 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1579 4.4183 . . 140 2628 100.00 . . . 0.3249 . 0.2757 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4183 4.7594 . . 148 2710 100.00 . . . 0.2997 . 0.2536 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.7594 5.2383 . . 120 2642 100.00 . . . 0.3126 . 0.2413 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.2383 5.9961 . . 160 2612 100.00 . . . 0.2481 . 0.2565 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.9961 7.5534 . . 144 2625 100.00 . . . 0.3199 . 0.2727 . . . . . . . . . . 'X-RAY DIFFRACTION' 7.5534 77.7265 . . 123 2653 100.00 . . . 0.2212 . 0.2157 . . . . . . . . . . # _struct.entry_id 6RV6 _struct.title 'Structure of properdin lacking TSR3 based on anomalous data' _struct.pdbx_descriptor Properdin _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6RV6 _struct_keywords.text 'innate immunity, complement, protease, regulator, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 26 ? CYS A 30 ? VAL A 53 CYS A 57 1 ? 5 HELX_P HELX_P2 AA2 ASP B 209 ? PHE B 220 ? ASP B 463 PHE B 474 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 29 SG ? ? A CYS 32 A CYS 56 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 16 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 43 A CYS 72 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 57 A CYS 75 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? A CYS 62 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 89 A CYS 127 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf5 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 93 A CYS 133 1_555 ? ? ? ? ? ? ? 2.012 ? ? disulf6 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 104 A CYS 111 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf7 disulf ? ? A CYS 105 SG ? ? ? 1_555 A CYS 143 SG ? ? A CYS 132 A CYS 170 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf8 disulf ? ? A CYS 121 SG ? ? ? 1_555 A CYS 157 SG ? ? A CYS 148 A CYS 184 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf9 disulf ? ? A CYS 125 SG ? ? ? 1_555 A CYS 163 SG ? ? A CYS 152 A CYS 190 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf10 disulf ? ? A CYS 136 SG ? ? ? 1_555 A CYS 147 SG ? ? A CYS 163 A CYS 174 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf11 disulf ? ? B CYS 15 SG ? ? ? 1_555 B CYS 52 SG ? ? B CYS 269 B CYS 306 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf12 disulf ? ? B CYS 19 SG ? ? ? 1_555 B CYS 58 SG ? ? B CYS 273 B CYS 312 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf13 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 42 SG ? ? B CYS 284 B CYS 296 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf14 disulf ? ? B CYS 73 SG ? ? ? 1_555 B CYS 116 SG ? ? B CYS 327 B CYS 370 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf15 disulf ? ? B CYS 83 SG ? ? ? 1_555 B CYS 122 SG ? ? B CYS 337 B CYS 376 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf16 disulf ? ? B CYS 96 SG ? ? ? 1_555 B CYS 106 SG ? ? B CYS 350 B CYS 360 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf17 disulf ? ? B CYS 137 SG ? ? ? 1_555 B CYS 201 SG ? ? B CYS 391 B CYS 455 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf18 disulf ? ? B CYS 141 SG ? ? ? 1_555 B CYS 207 SG ? ? B CYS 395 B CYS 461 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf19 disulf ? ? B CYS 153 SG ? ? ? 1_555 B CYS 185 SG ? ? B CYS 407 B CYS 439 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale one ? A TRP 56 CD1 ? ? ? 1_555 G MAN . C1 ? ? A TRP 83 A MAN 203 1_555 ? ? ? ? ? ? ? 1.519 ? C-Mannosylation covale2 covale one ? A TRP 59 CD1 ? ? ? 1_555 H MAN . C1 ? ? A TRP 86 A MAN 204 1_555 ? ? ? ? ? ? ? 1.530 ? C-Mannosylation covale3 covale one ? A THR 65 OG1 ? ? ? 1_555 D FUC . C1 ? ? A THR 92 D FUC 1 1_555 ? ? ? ? ? ? ? 1.441 ? O-Glycosylation covale4 covale one ? A TRP 112 CD1 ? ? ? 1_555 I MAN . C1 ? ? A TRP 139 A MAN 207 1_555 ? ? ? ? ? ? ? 1.522 ? C-Mannosylation covale5 covale one ? A TRP 115 CD1 ? ? ? 1_555 J MAN . C1 ? ? A TRP 142 A MAN 208 1_555 ? ? ? ? ? ? ? 1.519 ? C-Mannosylation covale6 covale one ? A TRP 118 CD1 ? ? ? 1_555 K MAN . C1 ? ? A TRP 145 A MAN 209 1_555 ? ? ? ? ? ? ? 1.523 ? C-Mannosylation covale7 covale one ? A THR 124 OG1 ? ? ? 1_555 C FUC . C1 ? ? A THR 151 C FUC 1 1_555 ? ? ? ? ? ? ? 1.432 ? O-Glycosylation covale8 covale one ? B TRP 6 CD1 ? ? ? 1_555 Q MAN . C1 ? ? B TRP 260 B MAN 511 1_555 ? ? ? ? ? ? ? 1.523 ? C-Mannosylation covale9 covale one ? B TRP 9 CD1 ? ? ? 1_555 R MAN . C1 ? ? B TRP 263 B MAN 512 1_555 ? ? ? ? ? ? ? 1.517 ? C-Mannosylation covale10 covale one ? B THR 18 OG1 ? ? ? 1_555 E FUC . C1 ? ? B THR 272 E FUC 1 1_555 ? ? ? ? ? ? ? 1.444 ? O-Glycosylation covale11 covale one ? B TRP 67 CD1 ? ? ? 1_555 L MAN . C1 ? ? B TRP 321 B MAN 503 1_555 ? ? ? ? ? ? ? 1.521 ? C-Mannosylation covale12 covale one ? B TRP 70 CD1 ? ? ? 1_555 M MAN . C1 ? ? B TRP 324 B MAN 504 1_555 ? ? ? ? ? ? ? 1.520 ? C-Mannosylation covale13 covale one ? B TRP 128 CD1 ? ? ? 1_555 N MAN . C1 ? ? B TRP 382 B MAN 505 1_555 ? ? ? ? ? ? ? 1.530 ? C-Mannosylation covale14 covale one ? B TRP 131 CD1 ? ? ? 1_555 P MAN . C1 ? ? B TRP 385 B MAN 510 1_555 ? ? ? ? ? ? ? 1.520 ? C-Mannosylation covale15 covale one ? B TRP 134 CD1 ? ? ? 1_555 O MAN . C1 ? ? B TRP 388 B MAN 509 1_555 ? ? ? ? ? ? ? 1.521 ? C-Mannosylation covale16 covale one ? B ASN 174 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 428 F NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale17 covale one ? C FUC . O3 ? ? ? 1_555 C BGC . C1 ? ? C FUC 1 C BGC 2 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale18 covale one ? D FUC . O3 ? ? ? 1_555 D BGC . C1 ? ? D FUC 1 D BGC 2 1_555 ? ? ? ? ? ? ? 1.457 ? ? covale19 covale one ? E FUC . O3 ? ? ? 1_555 E BGC . C1 ? ? E FUC 1 E BGC 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale20 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.455 ? ? covale21 covale one ? F NAG . O6 ? ? ? 1_555 F FUC . C1 ? ? F NAG 1 F FUC 3 1_555 ? ? ? ? ? ? ? 1.469 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 138 A . ? HIS 165 A PRO 139 A ? PRO 166 A 1 -3.00 2 MET 138 B . ? MET 392 B PRO 139 B ? PRO 393 B 1 -3.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 4 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 16 ? SER A 25 ? CYS A 43 SER A 52 AA1 2 PRO A 2 ? TYR A 9 ? PRO A 29 TYR A 36 AA1 3 ALA A 36 ? GLN A 38 ? ALA A 63 GLN A 65 AA1 4 GLN A 46 ? PRO A 47 ? GLN A 73 PRO A 74 AA2 1 ARG A 52 ? TRP A 53 ? ARG A 79 TRP A 80 AA2 2 GLN A 71 ? VAL A 78 ? GLN A 98 VAL A 105 AA2 3 LEU A 93 ? GLN A 98 ? LEU A 120 GLN A 125 AA3 1 LYS A 127 ? ARG A 133 ? LYS A 154 ARG A 160 AA3 2 GLN A 152 ? ASP A 158 ? GLN A 179 ASP A 185 AA4 1 LEU B 21 ? GLN B 27 ? LEU B 275 GLN B 281 AA4 2 THR B 47 ? ASN B 53 ? THR B 301 ASN B 307 AA5 1 GLU B 63 ? TRP B 64 ? GLU B 317 TRP B 318 AA5 2 CYS B 96 ? ARG B 97 ? CYS B 350 ARG B 351 AA6 1 GLY B 88 ? GLY B 93 ? GLY B 342 GLY B 347 AA6 2 GLN B 111 ? SER B 118 ? GLN B 365 SER B 372 AA6 3 GLY B 171 ? TRP B 178 ? GLY B 425 TRP B 432 AA6 4 THR B 163 ? MET B 166 ? THR B 417 MET B 420 AA7 1 LEU B 182 ? ARG B 184 ? LEU B 436 ARG B 438 AA7 2 PRO B 123 ? TRP B 128 ? PRO B 377 TRP B 382 AA7 3 THR B 146 ? PRO B 155 ? THR B 400 PRO B 409 AA7 4 VAL B 194 ? PRO B 200 ? VAL B 448 PRO B 454 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 18 ? O GLY A 45 N THR A 7 ? N THR A 34 AA1 2 3 N PHE A 6 ? N PHE A 33 O ALA A 36 ? O ALA A 63 AA1 3 4 N TYR A 37 ? N TYR A 64 O GLN A 46 ? O GLN A 73 AA2 1 2 N ARG A 52 ? N ARG A 79 O VAL A 78 ? O VAL A 105 AA2 2 3 N GLN A 71 ? N GLN A 98 O GLN A 98 ? O GLN A 125 AA3 1 2 N ARG A 130 ? N ARG A 157 O GLU A 155 ? O GLU A 182 AA4 1 2 N THR B 24 ? N THR B 278 O HIS B 50 ? O HIS B 304 AA5 1 2 N GLU B 63 ? N GLU B 317 O ARG B 97 ? O ARG B 351 AA6 1 2 N GLY B 88 ? N GLY B 342 O CYS B 116 ? O CYS B 370 AA6 2 3 N TYR B 117 ? N TYR B 371 O THR B 176 ? O THR B 430 AA6 3 4 O GLY B 171 ? O GLY B 425 N MET B 166 ? N MET B 420 AA7 1 2 O ARG B 184 ? O ARG B 438 N LEU B 124 ? N LEU B 378 AA7 2 3 N SER B 127 ? N SER B 381 O THR B 154 ? O THR B 408 AA7 3 4 N ARG B 147 ? N ARG B 401 O ARG B 199 ? O ARG B 453 # _atom_sites.entry_id 6RV6 _atom_sites.fract_transf_matrix[1][1] 0.004550 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004550 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021079 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.text 'FUC F 3 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 28 28 ASP ASP A . n A 1 2 PRO 2 29 29 PRO PRO A . n A 1 3 VAL 3 30 30 VAL VAL A . n A 1 4 LEU 4 31 31 LEU LEU A . n A 1 5 CYS 5 32 32 CYS CYS A . n A 1 6 PHE 6 33 33 PHE PHE A . n A 1 7 THR 7 34 34 THR THR A . n A 1 8 GLN 8 35 35 GLN GLN A . n A 1 9 TYR 9 36 36 TYR TYR A . n A 1 10 GLU 10 37 37 GLU GLU A . n A 1 11 GLU 11 38 38 GLU GLU A . n A 1 12 SER 12 39 39 SER SER A . n A 1 13 SER 13 40 40 SER SER A . n A 1 14 GLY 14 41 41 GLY GLY A . n A 1 15 LYS 15 42 42 LYS LYS A . n A 1 16 CYS 16 43 43 CYS CYS A . n A 1 17 LYS 17 44 44 LYS LYS A . n A 1 18 GLY 18 45 45 GLY GLY A . n A 1 19 LEU 19 46 46 LEU LEU A . n A 1 20 LEU 20 47 47 LEU LEU A . n A 1 21 GLY 21 48 48 GLY GLY A . n A 1 22 GLY 22 49 49 GLY GLY A . n A 1 23 GLY 23 50 50 GLY GLY A . n A 1 24 VAL 24 51 51 VAL VAL A . n A 1 25 SER 25 52 52 SER SER A . n A 1 26 VAL 26 53 53 VAL VAL A . n A 1 27 GLU 27 54 54 GLU GLU A . n A 1 28 ASP 28 55 55 ASP ASP A . n A 1 29 CYS 29 56 56 CYS CYS A . n A 1 30 CYS 30 57 57 CYS CYS A . n A 1 31 LEU 31 58 58 LEU LEU A . n A 1 32 ASN 32 59 59 ASN ASN A . n A 1 33 THR 33 60 60 THR THR A . n A 1 34 ALA 34 61 61 ALA ALA A . n A 1 35 PHE 35 62 62 PHE PHE A . n A 1 36 ALA 36 63 63 ALA ALA A . n A 1 37 TYR 37 64 64 TYR TYR A . n A 1 38 GLN 38 65 65 GLN GLN A . n A 1 39 LYS 39 66 66 LYS LYS A . n A 1 40 ARG 40 67 67 ARG ARG A . n A 1 41 SER 41 68 68 SER SER A . n A 1 42 GLY 42 69 69 GLY GLY A . n A 1 43 GLY 43 70 70 GLY GLY A . n A 1 44 LEU 44 71 71 LEU LEU A . n A 1 45 CYS 45 72 72 CYS CYS A . n A 1 46 GLN 46 73 73 GLN GLN A . n A 1 47 PRO 47 74 74 PRO PRO A . n A 1 48 CYS 48 75 75 CYS CYS A . n A 1 49 ARG 49 76 76 ARG ARG A . n A 1 50 SER 50 77 77 SER SER A . n A 1 51 PRO 51 78 78 PRO PRO A . n A 1 52 ARG 52 79 79 ARG ARG A . n A 1 53 TRP 53 80 80 TRP TRP A . n A 1 54 SER 54 81 81 SER SER A . n A 1 55 LEU 55 82 82 LEU LEU A . n A 1 56 TRP 56 83 83 TRP TRP A . n A 1 57 SER 57 84 84 SER SER A . n A 1 58 THR 58 85 85 THR THR A . n A 1 59 TRP 59 86 86 TRP TRP A . n A 1 60 ALA 60 87 87 ALA ALA A . n A 1 61 PRO 61 88 88 PRO PRO A . n A 1 62 CYS 62 89 89 CYS CYS A . n A 1 63 SER 63 90 90 SER SER A . n A 1 64 VAL 64 91 91 VAL VAL A . n A 1 65 THR 65 92 92 THR THR A . n A 1 66 CYS 66 93 93 CYS CYS A . n A 1 67 SER 67 94 94 SER SER A . n A 1 68 GLU 68 95 95 GLU GLU A . n A 1 69 GLY 69 96 96 GLY GLY A . n A 1 70 SER 70 97 97 SER SER A . n A 1 71 GLN 71 98 98 GLN GLN A . n A 1 72 LEU 72 99 99 LEU LEU A . n A 1 73 ARG 73 100 100 ARG ARG A . n A 1 74 TYR 74 101 101 TYR TYR A . n A 1 75 ARG 75 102 102 ARG ARG A . n A 1 76 ARG 76 103 103 ARG ARG A . n A 1 77 CYS 77 104 104 CYS CYS A . n A 1 78 VAL 78 105 105 VAL VAL A . n A 1 79 GLY 79 106 106 GLY GLY A . n A 1 80 TRP 80 107 107 TRP TRP A . n A 1 81 ASN 81 108 108 ASN ASN A . n A 1 82 GLY 82 109 109 GLY GLY A . n A 1 83 GLN 83 110 110 GLN GLN A . n A 1 84 CYS 84 111 111 CYS CYS A . n A 1 85 SER 85 112 112 SER SER A . n A 1 86 GLY 86 113 113 GLY GLY A . n A 1 87 LYS 87 114 114 LYS LYS A . n A 1 88 VAL 88 115 115 VAL VAL A . n A 1 89 ALA 89 116 116 ALA ALA A . n A 1 90 PRO 90 117 117 PRO PRO A . n A 1 91 GLY 91 118 118 GLY GLY A . n A 1 92 THR 92 119 119 THR THR A . n A 1 93 LEU 93 120 120 LEU LEU A . n A 1 94 GLU 94 121 121 GLU GLU A . n A 1 95 TRP 95 122 122 TRP TRP A . n A 1 96 GLN 96 123 123 GLN GLN A . n A 1 97 LEU 97 124 124 LEU LEU A . n A 1 98 GLN 98 125 125 GLN GLN A . n A 1 99 ALA 99 126 126 ALA ALA A . n A 1 100 CYS 100 127 127 CYS CYS A . n A 1 101 GLU 101 128 128 GLU GLU A . n A 1 102 ASP 102 129 129 ASP ASP A . n A 1 103 GLN 103 130 130 GLN GLN A . n A 1 104 GLN 104 131 131 GLN GLN A . n A 1 105 CYS 105 132 132 CYS CYS A . n A 1 106 CYS 106 133 133 CYS CYS A . n A 1 107 PRO 107 134 134 PRO PRO A . n A 1 108 GLU 108 135 135 GLU GLU A . n A 1 109 MET 109 136 136 MET MET A . n A 1 110 GLY 110 137 137 GLY GLY A . n A 1 111 GLY 111 138 138 GLY GLY A . n A 1 112 TRP 112 139 139 TRP TRP A . n A 1 113 SER 113 140 140 SER SER A . n A 1 114 GLY 114 141 141 GLY GLY A . n A 1 115 TRP 115 142 142 TRP TRP A . n A 1 116 GLY 116 143 143 GLY GLY A . n A 1 117 PRO 117 144 144 PRO PRO A . n A 1 118 TRP 118 145 145 TRP TRP A . n A 1 119 GLU 119 146 146 GLU GLU A . n A 1 120 PRO 120 147 147 PRO PRO A . n A 1 121 CYS 121 148 148 CYS CYS A . n A 1 122 SER 122 149 149 SER SER A . n A 1 123 VAL 123 150 150 VAL VAL A . n A 1 124 THR 124 151 151 THR THR A . n A 1 125 CYS 125 152 152 CYS CYS A . n A 1 126 SER 126 153 153 SER SER A . n A 1 127 LYS 127 154 154 LYS LYS A . n A 1 128 GLY 128 155 155 GLY GLY A . n A 1 129 THR 129 156 156 THR THR A . n A 1 130 ARG 130 157 157 ARG ARG A . n A 1 131 THR 131 158 158 THR THR A . n A 1 132 ARG 132 159 159 ARG ARG A . n A 1 133 ARG 133 160 160 ARG ARG A . n A 1 134 ARG 134 161 161 ARG ARG A . n A 1 135 ALA 135 162 162 ALA ALA A . n A 1 136 CYS 136 163 163 CYS CYS A . n A 1 137 ASN 137 164 164 ASN ASN A . n A 1 138 HIS 138 165 165 HIS HIS A . n A 1 139 PRO 139 166 166 PRO PRO A . n A 1 140 ALA 140 167 167 ALA ALA A . n A 1 141 PRO 141 168 168 PRO PRO A . n A 1 142 LYS 142 169 169 LYS LYS A . n A 1 143 CYS 143 170 170 CYS CYS A . n A 1 144 GLY 144 171 171 GLY GLY A . n A 1 145 GLY 145 172 172 GLY GLY A . n A 1 146 HIS 146 173 173 HIS HIS A . n A 1 147 CYS 147 174 174 CYS CYS A . n A 1 148 PRO 148 175 175 PRO PRO A . n A 1 149 GLY 149 176 176 GLY GLY A . n A 1 150 GLN 150 177 177 GLN GLN A . n A 1 151 ALA 151 178 178 ALA ALA A . n A 1 152 GLN 152 179 179 GLN GLN A . n A 1 153 GLU 153 180 180 GLU GLU A . n A 1 154 SER 154 181 181 SER SER A . n A 1 155 GLU 155 182 182 GLU GLU A . n A 1 156 ALA 156 183 183 ALA ALA A . n A 1 157 CYS 157 184 184 CYS CYS A . n A 1 158 ASP 158 185 185 ASP ASP A . n A 1 159 THR 159 186 186 THR THR A . n A 1 160 GLN 160 187 187 GLN GLN A . n A 1 161 GLN 161 188 188 GLN GLN A . n A 1 162 VAL 162 189 189 VAL VAL A . n A 1 163 CYS 163 190 190 CYS CYS A . n A 1 164 PRO 164 191 191 PRO PRO A . n A 1 165 GLU 165 192 192 GLU GLU A . n A 1 166 ASN 166 193 ? ? ? A . n A 1 167 LEU 167 194 ? ? ? A . n A 1 168 TYR 168 195 ? ? ? A . n A 1 169 PHE 169 196 ? ? ? A . n A 1 170 GLN 170 197 ? ? ? A . n B 2 1 GLY 1 255 255 GLY GLY B . n B 2 2 VAL 2 256 256 VAL VAL B . n B 2 3 ALA 3 257 257 ALA ALA B . n B 2 4 GLY 4 258 258 GLY GLY B . n B 2 5 GLY 5 259 259 GLY GLY B . n B 2 6 TRP 6 260 260 TRP TRP B . n B 2 7 GLY 7 261 261 GLY GLY B . n B 2 8 PRO 8 262 262 PRO PRO B . n B 2 9 TRP 9 263 263 TRP TRP B . n B 2 10 GLY 10 264 264 GLY GLY B . n B 2 11 PRO 11 265 265 PRO PRO B . n B 2 12 VAL 12 266 266 VAL VAL B . n B 2 13 SER 13 267 267 SER SER B . n B 2 14 PRO 14 268 268 PRO PRO B . n B 2 15 CYS 15 269 269 CYS CYS B . n B 2 16 PRO 16 270 270 PRO PRO B . n B 2 17 VAL 17 271 271 VAL VAL B . n B 2 18 THR 18 272 272 THR THR B . n B 2 19 CYS 19 273 273 CYS CYS B . n B 2 20 GLY 20 274 274 GLY GLY B . n B 2 21 LEU 21 275 275 LEU LEU B . n B 2 22 GLY 22 276 276 GLY GLY B . n B 2 23 GLN 23 277 277 GLN GLN B . n B 2 24 THR 24 278 278 THR THR B . n B 2 25 MET 25 279 279 MET MET B . n B 2 26 GLU 26 280 280 GLU GLU B . n B 2 27 GLN 27 281 281 GLN GLN B . n B 2 28 ARG 28 282 282 ARG ARG B . n B 2 29 THR 29 283 283 THR THR B . n B 2 30 CYS 30 284 284 CYS CYS B . n B 2 31 ASN 31 285 285 ASN ASN B . n B 2 32 HIS 32 286 286 HIS HIS B . n B 2 33 PRO 33 287 287 PRO PRO B . n B 2 34 VAL 34 288 288 VAL VAL B . n B 2 35 PRO 35 289 289 PRO PRO B . n B 2 36 GLN 36 290 290 GLN GLN B . n B 2 37 HIS 37 291 291 HIS HIS B . n B 2 38 GLY 38 292 292 GLY GLY B . n B 2 39 GLY 39 293 293 GLY GLY B . n B 2 40 PRO 40 294 294 PRO PRO B . n B 2 41 PHE 41 295 295 PHE PHE B . n B 2 42 CYS 42 296 296 CYS CYS B . n B 2 43 ALA 43 297 297 ALA ALA B . n B 2 44 GLY 44 298 298 GLY GLY B . n B 2 45 ASP 45 299 299 ASP ASP B . n B 2 46 ALA 46 300 300 ALA ALA B . n B 2 47 THR 47 301 301 THR THR B . n B 2 48 ARG 48 302 302 ARG ARG B . n B 2 49 THR 49 303 303 THR THR B . n B 2 50 HIS 50 304 304 HIS HIS B . n B 2 51 ILE 51 305 305 ILE ILE B . n B 2 52 CYS 52 306 306 CYS CYS B . n B 2 53 ASN 53 307 307 ASN ASN B . n B 2 54 THR 54 308 308 THR THR B . n B 2 55 ALA 55 309 309 ALA ALA B . n B 2 56 VAL 56 310 310 VAL VAL B . n B 2 57 PRO 57 311 311 PRO PRO B . n B 2 58 CYS 58 312 312 CYS CYS B . n B 2 59 PRO 59 313 313 PRO PRO B . n B 2 60 VAL 60 314 314 VAL VAL B . n B 2 61 ASP 61 315 315 ASP ASP B . n B 2 62 GLY 62 316 316 GLY GLY B . n B 2 63 GLU 63 317 317 GLU GLU B . n B 2 64 TRP 64 318 318 TRP TRP B . n B 2 65 ASP 65 319 319 ASP ASP B . n B 2 66 SER 66 320 320 SER SER B . n B 2 67 TRP 67 321 321 TRP TRP B . n B 2 68 GLY 68 322 322 GLY GLY B . n B 2 69 GLU 69 323 323 GLU GLU B . n B 2 70 TRP 70 324 324 TRP TRP B . n B 2 71 SER 71 325 325 SER SER B . n B 2 72 PRO 72 326 326 PRO PRO B . n B 2 73 CYS 73 327 327 CYS CYS B . n B 2 74 ILE 74 328 328 ILE ILE B . n B 2 75 ARG 75 329 329 ARG ARG B . n B 2 76 ARG 76 330 330 ARG ARG B . n B 2 77 ASN 77 331 331 ASN ASN B . n B 2 78 MET 78 332 332 MET MET B . n B 2 79 LYS 79 333 333 LYS LYS B . n B 2 80 SER 80 334 334 SER SER B . n B 2 81 ILE 81 335 335 ILE ILE B . n B 2 82 SER 82 336 336 SER SER B . n B 2 83 CYS 83 337 337 CYS CYS B . n B 2 84 GLN 84 338 338 GLN GLN B . n B 2 85 GLU 85 339 339 GLU GLU B . n B 2 86 ILE 86 340 340 ILE ILE B . n B 2 87 PRO 87 341 341 PRO PRO B . n B 2 88 GLY 88 342 342 GLY GLY B . n B 2 89 GLN 89 343 343 GLN GLN B . n B 2 90 GLN 90 344 344 GLN GLN B . n B 2 91 SER 91 345 345 SER SER B . n B 2 92 ARG 92 346 346 ARG ARG B . n B 2 93 GLY 93 347 347 GLY GLY B . n B 2 94 ARG 94 348 348 ARG ARG B . n B 2 95 THR 95 349 349 THR THR B . n B 2 96 CYS 96 350 350 CYS CYS B . n B 2 97 ARG 97 351 351 ARG ARG B . n B 2 98 GLY 98 352 352 GLY GLY B . n B 2 99 ARG 99 353 353 ARG ARG B . n B 2 100 LYS 100 354 354 LYS LYS B . n B 2 101 PHE 101 355 355 PHE PHE B . n B 2 102 ASP 102 356 356 ASP ASP B . n B 2 103 GLY 103 357 357 GLY GLY B . n B 2 104 HIS 104 358 358 HIS HIS B . n B 2 105 ARG 105 359 359 ARG ARG B . n B 2 106 CYS 106 360 360 CYS CYS B . n B 2 107 ALA 107 361 361 ALA ALA B . n B 2 108 GLY 108 362 362 GLY GLY B . n B 2 109 GLN 109 363 363 GLN GLN B . n B 2 110 GLN 110 364 364 GLN GLN B . n B 2 111 GLN 111 365 365 GLN GLN B . n B 2 112 ASP 112 366 366 ASP ASP B . n B 2 113 ILE 113 367 367 ILE ILE B . n B 2 114 ARG 114 368 368 ARG ARG B . n B 2 115 HIS 115 369 369 HIS HIS B . n B 2 116 CYS 116 370 370 CYS CYS B . n B 2 117 TYR 117 371 371 TYR TYR B . n B 2 118 SER 118 372 372 SER SER B . n B 2 119 ILE 119 373 373 ILE ILE B . n B 2 120 GLN 120 374 374 GLN GLN B . n B 2 121 HIS 121 375 375 HIS HIS B . n B 2 122 CYS 122 376 376 CYS CYS B . n B 2 123 PRO 123 377 377 PRO PRO B . n B 2 124 LEU 124 378 378 LEU LEU B . n B 2 125 LYS 125 379 379 LYS LYS B . n B 2 126 GLY 126 380 380 GLY GLY B . n B 2 127 SER 127 381 381 SER SER B . n B 2 128 TRP 128 382 382 TRP TRP B . n B 2 129 SER 129 383 383 SER SER B . n B 2 130 GLU 130 384 384 GLU GLU B . n B 2 131 TRP 131 385 385 TRP TRP B . n B 2 132 SER 132 386 386 SER SER B . n B 2 133 THR 133 387 387 THR THR B . n B 2 134 TRP 134 388 388 TRP TRP B . n B 2 135 GLY 135 389 389 GLY GLY B . n B 2 136 LEU 136 390 390 LEU LEU B . n B 2 137 CYS 137 391 391 CYS CYS B . n B 2 138 MET 138 392 392 MET MET B . n B 2 139 PRO 139 393 393 PRO PRO B . n B 2 140 PRO 140 394 394 PRO PRO B . n B 2 141 CYS 141 395 395 CYS CYS B . n B 2 142 GLY 142 396 396 GLY GLY B . n B 2 143 PRO 143 397 397 PRO PRO B . n B 2 144 ASN 144 398 398 ASN ASN B . n B 2 145 PRO 145 399 399 PRO PRO B . n B 2 146 THR 146 400 400 THR THR B . n B 2 147 ARG 147 401 401 ARG ARG B . n B 2 148 ALA 148 402 402 ALA ALA B . n B 2 149 ARG 149 403 403 ARG ARG B . n B 2 150 GLN 150 404 404 GLN GLN B . n B 2 151 ARG 151 405 405 ARG ARG B . n B 2 152 LEU 152 406 406 LEU LEU B . n B 2 153 CYS 153 407 407 CYS CYS B . n B 2 154 THR 154 408 408 THR THR B . n B 2 155 PRO 155 409 409 PRO PRO B . n B 2 156 LEU 156 410 410 LEU LEU B . n B 2 157 LEU 157 411 411 LEU LEU B . n B 2 158 PRO 158 412 412 PRO PRO B . n B 2 159 LYS 159 413 413 LYS LYS B . n B 2 160 TYR 160 414 414 TYR TYR B . n B 2 161 PRO 161 415 415 PRO PRO B . n B 2 162 PRO 162 416 416 PRO PRO B . n B 2 163 THR 163 417 417 THR THR B . n B 2 164 VAL 164 418 418 VAL VAL B . n B 2 165 SER 165 419 419 SER SER B . n B 2 166 MET 166 420 420 MET MET B . n B 2 167 VAL 167 421 421 VAL VAL B . n B 2 168 GLU 168 422 422 GLU GLU B . n B 2 169 GLY 169 423 423 GLY GLY B . n B 2 170 GLN 170 424 424 GLN GLN B . n B 2 171 GLY 171 425 425 GLY GLY B . n B 2 172 GLU 172 426 426 GLU GLU B . n B 2 173 LYS 173 427 427 LYS LYS B . n B 2 174 ASN 174 428 428 ASN ASN B . n B 2 175 VAL 175 429 429 VAL VAL B . n B 2 176 THR 176 430 430 THR THR B . n B 2 177 PHE 177 431 431 PHE PHE B . n B 2 178 TRP 178 432 432 TRP TRP B . n B 2 179 GLY 179 433 433 GLY GLY B . n B 2 180 ARG 180 434 434 ARG ARG B . n B 2 181 PRO 181 435 435 PRO PRO B . n B 2 182 LEU 182 436 436 LEU LEU B . n B 2 183 PRO 183 437 437 PRO PRO B . n B 2 184 ARG 184 438 438 ARG ARG B . n B 2 185 CYS 185 439 439 CYS CYS B . n B 2 186 GLU 186 440 440 GLU GLU B . n B 2 187 GLU 187 441 441 GLU GLU B . n B 2 188 LEU 188 442 442 LEU LEU B . n B 2 189 GLN 189 443 443 GLN GLN B . n B 2 190 GLY 190 444 444 GLY GLY B . n B 2 191 GLN 191 445 445 GLN GLN B . n B 2 192 LYS 192 446 446 LYS LYS B . n B 2 193 LEU 193 447 447 LEU LEU B . n B 2 194 VAL 194 448 448 VAL VAL B . n B 2 195 VAL 195 449 449 VAL VAL B . n B 2 196 GLU 196 450 450 GLU GLU B . n B 2 197 GLU 197 451 451 GLU GLU B . n B 2 198 LYS 198 452 452 LYS LYS B . n B 2 199 ARG 199 453 453 ARG ARG B . n B 2 200 PRO 200 454 454 PRO PRO B . n B 2 201 CYS 201 455 455 CYS CYS B . n B 2 202 LEU 202 456 456 LEU LEU B . n B 2 203 HIS 203 457 457 HIS HIS B . n B 2 204 VAL 204 458 458 VAL VAL B . n B 2 205 PRO 205 459 459 PRO PRO B . n B 2 206 ALA 206 460 460 ALA ALA B . n B 2 207 CYS 207 461 461 CYS CYS B . n B 2 208 LYS 208 462 462 LYS LYS B . n B 2 209 ASP 209 463 463 ASP ASP B . n B 2 210 PRO 210 464 464 PRO PRO B . n B 2 211 GLU 211 465 465 GLU GLU B . n B 2 212 GLU 212 466 466 GLU GLU B . n B 2 213 GLU 213 467 467 GLU GLU B . n B 2 214 GLU 214 468 468 GLU GLU B . n B 2 215 LEU 215 469 469 LEU LEU B . n B 2 216 GLU 216 470 470 GLU GLU B . n B 2 217 ASN 217 471 471 ASN ASN B . n B 2 218 LEU 218 472 472 LEU LEU B . n B 2 219 TYR 219 473 473 TYR TYR B . n B 2 220 PHE 220 474 474 PHE PHE B . n B 2 221 GLN 221 475 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 MAN 1 203 1025 MAN MAN A . H 5 MAN 1 204 1026 MAN MAN A . I 5 MAN 1 207 1029 MAN MAN A . J 5 MAN 1 208 1030 MAN MAN A . K 5 MAN 1 209 1031 MAN MAN A . L 5 MAN 1 503 1038 MAN MAN B . M 5 MAN 1 504 1039 MAN MAN B . N 5 MAN 1 505 1040 MAN MAN B . O 5 MAN 1 509 1046 MAN MAN B . P 5 MAN 1 510 1048 MAN MAN B . Q 5 MAN 1 511 1096 MAN MAN B . R 5 MAN 1 512 1097 MAN MAN B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7150 ? 1 MORE 24 ? 1 'SSA (A^2)' 26940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-21 2 'Structure model' 1 1 2019-09-25 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' citation 3 2 'Structure model' citation_author 4 3 'Structure model' atom_site 5 3 'Structure model' atom_site_anisotrop 6 3 'Structure model' chem_comp 7 3 'Structure model' database_PDB_caveat 8 3 'Structure model' entity 9 3 'Structure model' pdbx_branch_scheme 10 3 'Structure model' pdbx_chem_comp_identifier 11 3 'Structure model' pdbx_entity_branch 12 3 'Structure model' pdbx_entity_branch_descriptor 13 3 'Structure model' pdbx_entity_branch_link 14 3 'Structure model' pdbx_entity_branch_list 15 3 'Structure model' pdbx_entity_nonpoly 16 3 'Structure model' pdbx_nonpoly_scheme 17 3 'Structure model' pdbx_struct_assembly_gen 18 3 'Structure model' pdbx_validate_chiral 19 3 'Structure model' struct_asym 20 3 'Structure model' struct_conn 21 3 'Structure model' struct_site 22 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.type' 2 3 'Structure model' '_atom_site.B_iso_or_equiv' 3 3 'Structure model' '_atom_site.Cartn_x' 4 3 'Structure model' '_atom_site.Cartn_y' 5 3 'Structure model' '_atom_site.Cartn_z' 6 3 'Structure model' '_atom_site.auth_asym_id' 7 3 'Structure model' '_atom_site.auth_atom_id' 8 3 'Structure model' '_atom_site.auth_comp_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 17 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 19 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 20 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 23 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 24 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 25 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 26 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 27 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 28 3 'Structure model' '_atom_site_anisotrop.type_symbol' 29 3 'Structure model' '_chem_comp.name' 30 3 'Structure model' '_chem_comp.type' 31 3 'Structure model' '_database_PDB_caveat.text' 32 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 33 3 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 34 3 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 35 3 'Structure model' '_struct_conn.pdbx_dist_value' 36 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 37 3 'Structure model' '_struct_conn.pdbx_role' 38 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 39 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 40 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 41 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 42 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 43 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 44 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 45 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3260: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 132 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 132 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 132 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 122.22 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 8.02 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? 76.75 -30.24 2 1 ARG A 67 ? ? 55.86 -5.24 3 1 LEU A 71 ? ? 56.34 74.98 4 1 SER A 94 ? ? 57.12 -161.14 5 1 ASN A 108 ? ? 61.04 80.30 6 1 SER A 153 ? ? 59.79 -143.16 7 1 ASN A 164 ? ? -148.77 41.85 8 1 HIS A 165 ? ? -156.61 73.36 9 1 CYS A 170 ? ? 57.44 -98.10 10 1 PRO A 191 ? ? -58.25 84.93 11 1 CYS B 284 ? ? -107.87 54.55 12 1 LYS B 333 ? ? 65.30 -154.45 13 1 CYS B 395 ? ? 94.61 -15.40 14 1 ASN B 398 ? ? 49.89 75.35 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id F _pdbx_validate_chiral.auth_comp_id FUC _pdbx_validate_chiral.auth_seq_id 3 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 193 ? A ASN 166 2 1 Y 1 A LEU 194 ? A LEU 167 3 1 Y 1 A TYR 195 ? A TYR 168 4 1 Y 1 A PHE 196 ? A PHE 169 5 1 Y 1 A GLN 197 ? A GLN 170 6 1 Y 1 B GLN 475 ? B GLN 221 # _pdbx_audit_support.funding_organization Lundbeckfonden _pdbx_audit_support.country Denmark _pdbx_audit_support.grant_number R155-2015-2666 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 FUC 1 C FUC 1 A FUC 1023 n C 3 BGC 2 C BGC 2 A BGC 1024 n D 3 FUC 1 D FUC 1 A FUC 1027 n D 3 BGC 2 D BGC 2 A BGC 1028 n E 3 FUC 1 E FUC 1 B FUC 1036 n E 3 BGC 2 E BGC 2 B BGC 1037 n F 4 NAG 1 F NAG 1 B NAG 1043 n F 4 NAG 2 F NAG 2 B NAG 1044 n F 4 FUC 3 F FUC 3 B FUC 1042 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpb1-3LFucpa1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a1221m-1a_1-5][a2122h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(3+1)][a-L-Fucp]{[(3+1)][b-D-Glcp]{}}}' LINUCS PDB-CARE ? 4 4 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 BGC C1 O1 1 FUC O3 HO3 sing ? 2 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 4 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 FUC 1 n 3 BGC 2 n 4 NAG 1 n 4 NAG 2 n 4 FUC 3 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id FUC _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id FUC _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name alpha-D-mannopyranose _pdbx_entity_nonpoly.comp_id MAN # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #