HEADER LYASE 07-JUN-19 6RX8 TITLE EDDS LYASE VARIANT D290M/Y320M WITH BOUND FUMARATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININOSUCCINATE LYASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHELATIVORANS SP. (STRAIN BNC1); SOURCE 3 ORGANISM_TAXID: 266779; SOURCE 4 STRAIN: BNC1; SOURCE 5 GENE: MESO_0564; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS EDDS LYASE, C-N LYASE, ASPARTASE/FUMARASE, PROTEIN ENGINEERING, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR E.GRANDI,G.J.POELARENDS,A.M.W.H.THUNNISSEN REVDAT 5 24-JAN-24 6RX8 1 REMARK REVDAT 4 15-NOV-23 6RX8 1 REMARK LINK ATOM REVDAT 3 01-JAN-20 6RX8 1 JRNL REVDAT 2 27-NOV-19 6RX8 1 JRNL REVDAT 1 30-OCT-19 6RX8 0 JRNL AUTH J.ZHANG,E.GRANDI,H.FU,T.SARAVANAN,L.BOTHOF,P.G.TEPPER, JRNL AUTH 2 A.W.H.THUNNISSEN,G.J.POELARENDS JRNL TITL ENGINEERED C-N LYASE: ENANTIOSELECTIVE SYNTHESIS OF CHIRAL JRNL TITL 2 SYNTHONS FOR ARTIFICIAL DIPEPTIDE SWEETENERS. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 59 429 2020 JRNL REFN ESSN 1521-3773 JRNL PMID 31625664 JRNL DOI 10.1002/ANIE.201910704 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14RC1_3161 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 56037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 4761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.8378 - 5.9329 0.99 3487 183 0.1596 0.1910 REMARK 3 2 5.9329 - 4.7228 1.00 3591 92 0.1461 0.1900 REMARK 3 3 4.7228 - 4.1298 0.99 3538 103 0.1239 0.1464 REMARK 3 4 4.1298 - 3.7540 0.99 3483 123 0.1393 0.1683 REMARK 3 5 3.7540 - 3.4860 0.99 3488 183 0.1569 0.1813 REMARK 3 6 3.4860 - 3.2811 0.99 3385 226 0.1758 0.2158 REMARK 3 7 3.2811 - 3.1172 0.99 3421 259 0.1822 0.1981 REMARK 3 8 3.1172 - 2.9818 0.99 3429 190 0.1951 0.2398 REMARK 3 9 2.9818 - 2.8672 0.99 3565 122 0.2049 0.2601 REMARK 3 10 2.8672 - 2.7684 0.99 3403 225 0.2027 0.2096 REMARK 3 11 2.7684 - 2.6820 0.99 3454 166 0.1902 0.2278 REMARK 3 12 2.6820 - 2.6055 0.99 3590 85 0.1938 0.2517 REMARK 3 13 2.6055 - 2.5370 0.99 3449 190 0.2042 0.2169 REMARK 3 14 2.5370 - 2.4751 1.00 3451 223 0.1928 0.2046 REMARK 3 15 2.4751 - 2.4189 0.99 3433 181 0.1975 0.2023 REMARK 3 16 2.4189 - 2.3675 0.99 3576 109 0.1985 0.1986 REMARK 3 17 2.3675 - 2.3202 1.00 3514 113 0.2127 0.2748 REMARK 3 18 2.3202 - 2.2765 0.99 3529 195 0.2063 0.2523 REMARK 3 19 2.2765 - 2.2358 1.00 3479 160 0.2108 0.3155 REMARK 3 20 2.2358 - 2.1980 1.00 3540 148 0.2133 0.2414 REMARK 3 21 2.1980 - 2.1625 1.00 3447 161 0.2104 0.2322 REMARK 3 22 2.1625 - 2.1293 1.00 3542 142 0.2362 0.2715 REMARK 3 23 2.1293 - 2.0980 1.00 3495 154 0.2347 0.3175 REMARK 3 24 2.0980 - 2.0685 1.00 3470 163 0.2336 0.2763 REMARK 3 25 2.0685 - 2.0405 1.00 3538 137 0.2386 0.2462 REMARK 3 26 2.0405 - 2.0141 1.00 3596 140 0.2484 0.3125 REMARK 3 27 2.0141 - 1.9889 1.00 3406 232 0.2597 0.2851 REMARK 3 28 1.9889 - 1.9649 1.00 3525 140 0.2569 0.2548 REMARK 3 29 1.9649 - 1.9421 1.00 3568 133 0.2749 0.3347 REMARK 3 30 1.9421 - 1.9203 0.61 2128 83 0.5450 0.6085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 450 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.6653 -41.3093 -16.5305 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.2526 REMARK 3 T33: 0.2923 T12: 0.0790 REMARK 3 T13: 0.0334 T23: -0.0586 REMARK 3 L TENSOR REMARK 3 L11: 1.0583 L22: 1.7327 REMARK 3 L33: 2.2771 L12: 0.4079 REMARK 3 L13: 1.0088 L23: 1.4073 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: 0.2414 S13: -0.2133 REMARK 3 S21: -0.2257 S22: -0.0545 S23: -0.0637 REMARK 3 S31: 0.3041 S32: 0.1457 S33: -0.0455 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 451 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.0148 -1.7828 19.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 0.2971 REMARK 3 T33: 0.2569 T12: 0.0541 REMARK 3 T13: -0.0879 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.3611 L22: 4.2068 REMARK 3 L33: 3.2912 L12: 0.9065 REMARK 3 L13: 0.5898 L23: 3.6028 REMARK 3 S TENSOR REMARK 3 S11: -0.0444 S12: -0.0904 S13: 0.0009 REMARK 3 S21: 0.2631 S22: 0.3002 S23: -0.4566 REMARK 3 S31: 0.1353 S32: 0.3625 S33: -0.2808 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.4794 0.7908 16.0188 REMARK 3 T TENSOR REMARK 3 T11: 0.1775 T22: 0.2067 REMARK 3 T33: 0.1796 T12: 0.0164 REMARK 3 T13: -0.0291 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.1867 L22: 0.6630 REMARK 3 L33: 0.2206 L12: 0.0894 REMARK 3 L13: 0.0481 L23: 0.0613 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.0448 S13: 0.0259 REMARK 3 S21: 0.1379 S22: 0.0312 S23: -0.1076 REMARK 3 S31: -0.0005 S32: 0.0744 S33: -0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 263 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.0426 -11.4168 10.9094 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.1902 REMARK 3 T33: 0.1752 T12: 0.0183 REMARK 3 T13: 0.0091 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.1562 L22: 0.4378 REMARK 3 L33: 0.3304 L12: 0.0327 REMARK 3 L13: 0.0417 L23: -0.1092 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.0357 S13: -0.0295 REMARK 3 S21: 0.1056 S22: 0.0358 S23: -0.0391 REMARK 3 S31: 0.0398 S32: -0.0061 S33: -0.0115 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.3558 -37.3896 -13.7795 REMARK 3 T TENSOR REMARK 3 T11: 0.2802 T22: 0.1957 REMARK 3 T33: 0.2582 T12: 0.0531 REMARK 3 T13: 0.0383 T23: -0.0447 REMARK 3 L TENSOR REMARK 3 L11: 1.1862 L22: 1.7787 REMARK 3 L33: 3.6671 L12: 0.0571 REMARK 3 L13: 0.0568 L23: 0.9805 REMARK 3 S TENSOR REMARK 3 S11: 0.0641 S12: 0.2378 S13: -0.1933 REMARK 3 S21: -0.3307 S22: -0.0461 S23: -0.0570 REMARK 3 S31: 0.3128 S32: 0.1105 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RX8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292102796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : INCOATEC HELIOS OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56145 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 23.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.78500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6G3D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M SODIUM FUMARATE AND 100 MM BIS REMARK 280 -TRIS PROPANE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.11500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.22550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.11500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.22550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.11500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.22550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 72.11500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.22550 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 72.22550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 72.22550 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.22550 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.22550 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.11500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.11500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.11500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 71.58000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.11500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 35240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -143.16000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -143.16000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 603 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ILE A 3 REMARK 465 ASN A 4 REMARK 465 ARG A 502 REMARK 465 HIS A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 HIS A 506 REMARK 465 HIS A 507 REMARK 465 HIS A 508 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 163 -69.26 -107.01 REMARK 500 ILE A 166 -156.67 -137.33 REMARK 500 ASN A 194 49.96 -85.96 REMARK 500 ALA A 201 -127.67 52.16 REMARK 500 THR A 203 -10.54 161.31 REMARK 500 VAL A 226 -70.13 -73.90 REMARK 500 TYR A 364 13.15 83.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 603 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 188 OE1 REMARK 620 2 GLU A 188 OE1 0.0 REMARK 620 3 HOH A 710 O 101.3 101.3 REMARK 620 4 HOH A 710 O 127.0 127.0 111.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FUM A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FUM A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 604 DBREF 6RX8 A 1 502 UNP Q11KV9 Q11KV9_CHESB 1 502 SEQADV 6RX8 MET A 290 UNP Q11KV9 ASP 290 ENGINEERED MUTATION SEQADV 6RX8 MET A 320 UNP Q11KV9 TYR 320 ENGINEERED MUTATION SEQADV 6RX8 HIS A 503 UNP Q11KV9 EXPRESSION TAG SEQADV 6RX8 HIS A 504 UNP Q11KV9 EXPRESSION TAG SEQADV 6RX8 HIS A 505 UNP Q11KV9 EXPRESSION TAG SEQADV 6RX8 HIS A 506 UNP Q11KV9 EXPRESSION TAG SEQADV 6RX8 HIS A 507 UNP Q11KV9 EXPRESSION TAG SEQADV 6RX8 HIS A 508 UNP Q11KV9 EXPRESSION TAG SEQRES 1 A 508 MET ASN ILE ASN VAL PRO ASP ALA THR ARG ILE GLY ARG SEQRES 2 A 508 ALA THR GLY ALA LYS ALA PRO GLU PHE GLN GLU LEU TYR SEQRES 3 A 508 ASP PHE ASP ALA ALA ALA LEU THR LEU THR SER ALA VAL SEQRES 4 A 508 PHE PRO TYR ASP SER GLN ILE HIS ARG ALA HIS VAL VAL SEQRES 5 A 508 MET LEU THR GLU GLN GLY ILE LEU THR VAL GLU GLU SER SEQRES 6 A 508 ALA THR ILE LEU SER GLY LEU ALA GLN VAL ASP GLU LEU SEQRES 7 A 508 ALA ALA THR ASP GLY SER LEU ARG THR TYR LEU PRO TYR SEQRES 8 A 508 GLU ALA ALA LEU LYS ARG THR ILE GLY SER VAL ALA GLY SEQRES 9 A 508 LYS MET HIS ILE GLY ARG SER ARG ASN ASP LEU ALA ASN SEQRES 10 A 508 ALA GLY LYS ARG MET PHE LEU ARG ASP GLN LEU LEU ARG SEQRES 11 A 508 THR ILE GLU ALA VAL ILE GLY TYR ARG GLU ALA VAL VAL SEQRES 12 A 508 HIS LYS ALA ALA ASP HIS LEU ASP THR VAL MET VAL VAL SEQRES 13 A 508 TYR THR GLN ARG LYS GLU ALA GLN PRO ILE THR LEU GLY SEQRES 14 A 508 HIS TYR LEU MET ALA ILE SER GLU ASN LEU ALA LYS ASN SEQRES 15 A 508 LEU ASP ARG TYR ARG GLU LEU TYR ALA ARG ILE ASN LEU SEQRES 16 A 508 CYS PRO LEU GLY ALA ALA ALA THR ALA GLY THR GLY TRP SEQRES 17 A 508 PRO LEU ASN ARG ASP ARG THR SER ALA LEU LEU GLY PHE SEQRES 18 A 508 ASP GLY LEU VAL VAL ASN SER ILE GLU GLY VAL ALA GLY SEQRES 19 A 508 TRP ASP HIS VAL ALA GLU HIS ALA PHE VAL ASN ALA VAL SEQRES 20 A 508 PHE LEU SER GLY LEU SER ARG LEU ALA SER GLU ILE GLN SEQRES 21 A 508 LEU TRP SER THR ASP GLU TYR GLN VAL ALA GLU LEU ASP SEQRES 22 A 508 ALA SER PHE ALA GLY THR SER SER ILE MET PRO GLN LYS SEQRES 23 A 508 LYS ASN PRO MET SER LEU GLU ARG SER ARG LYS ALA ALA SEQRES 24 A 508 PHE ALA ALA MET GLY PRO LEU VAL GLY ILE LEU THR SER SEQRES 25 A 508 LEU ASN ALA ILE GLU TYR GLN MET SER ALA ALA ARG VAL SEQRES 26 A 508 GLU LEU GLU PRO ARG SER ILE ASP ALA LEU ILE ALA ALA SEQRES 27 A 508 THR HIS ALA MET THR GLY VAL VAL ARG THR LEU HIS PRO SEQRES 28 A 508 ASN LYS GLU ARG MET ARG GLN TYR ALA ALA GLU ASN TYR SEQRES 29 A 508 SER THR MET THR ASP LEU THR ASP MET LEU VAL ARG ARG SEQRES 30 A 508 VAL GLY ILE ASP TYR ARG GLU ALA HIS GLU ILE VAL ALA SEQRES 31 A 508 HIS VAL VAL ILE THR ALA ILE GLU LYS GLY ILE LYS ALA SEQRES 32 A 508 ASN LYS ILE GLY LEU ASP LEU VAL GLN GLU ALA ALA VAL SEQRES 33 A 508 ALA GLN THR GLY ALA GLY ILE ASN VAL SER ALA ASP ASP SEQRES 34 A 508 ILE LYS ASP ALA LEU ASP PRO TRP GLN ASN VAL LEU ARG SEQRES 35 A 508 ARG GLU GLY LYS GLY MET PRO ALA PRO MET SER VAL LYS SEQRES 36 A 508 ALA SER ILE ASP ASP ALA MET ALA GLU LEU HIS LYS ASP SEQRES 37 A 508 ARG ALA TRP LEU ALA ASN ALA THR GLN ALA LEU ALA ASN SEQRES 38 A 508 ALA LYS GLN THR LEU ALA ASP SER VAL GLN GLN ILE ILE SEQRES 39 A 508 GLN THR ASP ARG LYS TYR LEU ARG HIS HIS HIS HIS HIS SEQRES 40 A 508 HIS HET FUM A 601 8 HET FUM A 602 8 HET NA A 603 1 HET NA A 604 1 HETNAM FUM FUMARIC ACID HETNAM NA SODIUM ION FORMUL 2 FUM 2(C4 H4 O4) FORMUL 4 NA 2(NA 1+) FORMUL 6 HOH *270(H2 O) HELIX 1 AA1 ALA A 19 ALA A 32 1 14 HELIX 2 AA2 THR A 34 GLN A 57 1 24 HELIX 3 AA3 THR A 61 ASP A 82 1 22 HELIX 4 AA4 GLY A 83 ARG A 86 5 4 HELIX 5 AA5 THR A 87 GLY A 100 1 14 HELIX 6 AA6 SER A 101 ILE A 108 5 8 HELIX 7 AA7 SER A 111 ASP A 148 1 38 HELIX 8 AA8 LEU A 168 ASN A 194 1 27 HELIX 9 AA9 ASN A 211 LEU A 219 1 9 HELIX 10 AB1 ASN A 227 GLY A 234 1 8 HELIX 11 AB2 TRP A 235 SER A 263 1 29 HELIX 12 AB3 ASP A 273 ALA A 277 5 5 HELIX 13 AB4 PRO A 289 ALA A 302 1 14 HELIX 14 AB5 ALA A 302 ASN A 314 1 13 HELIX 15 AB6 GLU A 328 LEU A 349 1 22 HELIX 16 AB7 ASN A 352 ASN A 363 1 12 HELIX 17 AB8 THR A 366 GLY A 379 1 14 HELIX 18 AB9 ASP A 381 GLY A 400 1 20 HELIX 19 AC1 LYS A 402 ILE A 406 5 5 HELIX 20 AC2 GLY A 407 GLY A 420 1 14 HELIX 21 AC3 SER A 426 ASP A 435 1 10 HELIX 22 AC4 ASP A 435 ARG A 443 1 9 HELIX 23 AC5 ALA A 450 LEU A 501 1 52 SHEET 1 AA1 2 VAL A 153 THR A 158 0 SHEET 2 AA1 2 LYS A 161 THR A 167 -1 O ILE A 166 N MET A 154 SHEET 1 AA2 2 ALA A 270 GLU A 271 0 SHEET 2 AA2 2 HIS A 350 PRO A 351 -1 O HIS A 350 N GLU A 271 LINK OE1 GLU A 188 NA NA A 603 1555 1555 2.32 LINK OE1 GLU A 188 NA NA A 603 1555 4555 2.32 LINK NA NA A 603 O HOH A 710 1555 1555 2.35 LINK NA NA A 603 O HOH A 710 1555 4555 2.35 LINK NA NA A 604 O HOH A 824 1555 4555 3.08 SITE 1 AC1 11 SER A 111 ARG A 112 ASN A 113 THR A 158 SITE 2 AC1 11 GLN A 159 SER A 280 SER A 281 ILE A 282 SITE 3 AC1 11 MET A 283 LYS A 286 ASN A 288 SITE 1 AC2 11 TYR A 26 ARG A 112 MET A 290 ARG A 294 SITE 2 AC2 11 HOH A 702 HOH A 708 HOH A 713 HOH A 736 SITE 3 AC2 11 HOH A 831 HOH A 874 HOH A 877 SITE 1 AC3 3 GLU A 188 ARG A 192 HOH A 710 SITE 1 AC4 4 LYS A 181 ARG A 185 HIS A 237 HOH A 824 CRYST1 143.160 144.230 144.451 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006985 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006923 0.00000