HEADER HYDROLASE 10-JUN-19 6RY1 TITLE CRYSTAL STRUCTURE OF DFG5 FROM CHAETOMIUM THERMOPHILUM IN COMPLEX WITH TITLE 2 MANNOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANNAN ENDO-1,6-ALPHA-MANNOSIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.101; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM (STRAIN DSM 1495 / CBS SOURCE 3 144.50 / IMI 039719); SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 STRAIN: DSM 1495 / CBS 144.50 / IMI 039719; SOURCE 6 GENE: CTHT_0020800; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SHUFFLE T7 EXPRESS COMPETENT KEYWDS TRANSGLYCOSIDASE, FUNGAL CELL WALL, PLASMA MEMBRANE, GPI-ANCHOR, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.-O.ESSEN,M.S.VOGT REVDAT 3 16-SEP-20 6RY1 1 JRNL REVDAT 2 26-AUG-20 6RY1 1 JRNL REVDAT 1 12-AUG-20 6RY1 0 JRNL AUTH M.S.VOGT,G.F.SCHMITZ,D.VARON SILVA,H.U.MOSCH,L.O.ESSEN JRNL TITL STRUCTURAL BASE FOR THE TRANSFER OF GPI-ANCHORED JRNL TITL 2 GLYCOPROTEINS INTO FUNGAL CELL WALLS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 22061 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32839341 JRNL DOI 10.1073/PNAS.2010661117 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 89815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.097 REMARK 3 R VALUE (WORKING SET) : 0.096 REMARK 3 FREE R VALUE : 0.125 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 4566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9480 - 4.0383 0.99 2939 154 0.1346 0.1485 REMARK 3 2 4.0383 - 3.2057 0.99 2859 164 0.1028 0.1086 REMARK 3 3 3.2057 - 2.8005 0.99 2832 151 0.1052 0.1300 REMARK 3 4 2.8005 - 2.5445 0.99 2880 158 0.1004 0.1226 REMARK 3 5 2.5445 - 2.3622 0.99 2829 158 0.0942 0.1158 REMARK 3 6 2.3622 - 2.2229 0.99 2836 159 0.0870 0.1174 REMARK 3 7 2.2229 - 2.1116 0.99 2832 136 0.0844 0.1198 REMARK 3 8 2.1116 - 2.0197 1.00 2861 149 0.0856 0.1122 REMARK 3 9 2.0197 - 1.9419 1.00 2826 161 0.0825 0.1063 REMARK 3 10 1.9419 - 1.8749 1.00 2875 130 0.0804 0.1102 REMARK 3 11 1.8749 - 1.8163 1.00 2832 147 0.0822 0.1242 REMARK 3 12 1.8163 - 1.7644 1.00 2916 116 0.0838 0.1318 REMARK 3 13 1.7644 - 1.7179 1.00 2808 122 0.0788 0.1344 REMARK 3 14 1.7179 - 1.6760 1.00 2842 166 0.0764 0.1124 REMARK 3 15 1.6760 - 1.6379 1.00 2864 150 0.0743 0.1225 REMARK 3 16 1.6379 - 1.6030 1.00 2804 163 0.0741 0.1193 REMARK 3 17 1.6030 - 1.5710 1.00 2788 161 0.0736 0.1028 REMARK 3 18 1.5710 - 1.5413 1.00 2886 161 0.0765 0.1147 REMARK 3 19 1.5413 - 1.5138 1.00 2826 143 0.0777 0.1134 REMARK 3 20 1.5138 - 1.4881 1.00 2823 169 0.0834 0.1280 REMARK 3 21 1.4881 - 1.4641 1.00 2828 146 0.0882 0.1444 REMARK 3 22 1.4641 - 1.4416 1.00 2852 143 0.0894 0.1363 REMARK 3 23 1.4416 - 1.4204 1.00 2853 147 0.0934 0.1319 REMARK 3 24 1.4204 - 1.4004 1.00 2786 169 0.0984 0.1444 REMARK 3 25 1.4004 - 1.3815 1.00 2829 166 0.1035 0.1833 REMARK 3 26 1.3815 - 1.3635 1.00 2833 152 0.1066 0.1641 REMARK 3 27 1.3635 - 1.3465 1.00 2807 169 0.1076 0.1487 REMARK 3 28 1.3465 - 1.3303 1.00 2840 143 0.1100 0.1303 REMARK 3 29 1.3303 - 1.3148 1.00 2776 166 0.1112 0.1687 REMARK 3 30 1.3148 - 1.3000 1.00 2887 147 0.1160 0.1606 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 10.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3477 REMARK 3 ANGLE : 1.184 4748 REMARK 3 CHIRALITY : 0.091 481 REMARK 3 PLANARITY : 0.009 623 REMARK 3 DIHEDRAL : 13.967 1264 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292101275. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89845 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 41.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.16200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUMIODIDE, PEG3350, CALCIUM REMARK 280 ACETATE, MES, PEG 8000, PH 6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.92750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.51100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.92750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.51100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CH3 ACT A 701 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1323 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 GLY A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 GLY A 19 REMARK 465 LEU A 20 REMARK 465 VAL A 21 REMARK 465 PRO A 22 REMARK 465 ARG A 23 REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 HIS A 26 REMARK 465 MET A 27 REMARK 465 ALA A 28 REMARK 465 SER A 29 REMARK 465 GLN A 30 REMARK 465 GLN A 31 REMARK 465 ARG A 442 REMARK 465 GLU A 443 REMARK 465 ILE A 444 REMARK 465 ASN A 445 REMARK 465 ALA A 446 REMARK 465 GLY A 447 REMARK 465 ASP A 448 REMARK 465 ARG A 449 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 802 O HOH A 925 1.94 REMARK 500 O HOH A 802 O HOH A 1011 1.96 REMARK 500 O HOH A 992 O HOH A 1089 1.98 REMARK 500 O HOH A 1161 O HOH A 1343 1.99 REMARK 500 O HOH A 1343 O HOH A 1411 1.99 REMARK 500 O HOH A 1132 O HOH A 1250 2.01 REMARK 500 O HOH A 1253 O HOH A 1341 2.03 REMARK 500 O HOH A 1236 O HOH A 1422 2.04 REMARK 500 O HOH A 1361 O HOH A 1379 2.04 REMARK 500 O HOH A 1212 O HOH A 1241 2.06 REMARK 500 O HOH A 1286 O HOH A 1297 2.11 REMARK 500 O HOH A 1328 O HOH A 1390 2.12 REMARK 500 O HOH A 1309 O HOH A 1417 2.13 REMARK 500 O HOH A 824 O HOH A 1349 2.15 REMARK 500 O HOH A 938 O HOH A 1182 2.16 REMARK 500 O HOH A 1158 O HOH A 1413 2.17 REMARK 500 O HOH A 1127 O HOH A 1297 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 325 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 32.95 -141.10 REMARK 500 CYS A 315 -21.76 -141.44 REMARK 500 ARG A 373 11.48 -140.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1452 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1453 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A1454 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1455 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A1456 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A1457 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A1458 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A1459 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH A1460 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A1461 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A1462 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH A1463 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH A1464 DISTANCE = 7.09 ANGSTROMS REMARK 525 HOH A1465 DISTANCE = 7.66 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 702 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 79 OD1 REMARK 620 2 GLU A 285 OE1 53.4 REMARK 620 3 GLU A 285 OE2 53.8 2.6 REMARK 620 4 HIS A 391 O 88.2 61.8 59.3 REMARK 620 5 HOH A 970 O 98.3 47.0 47.6 70.9 REMARK 620 6 HOH A1091 O 76.5 123.7 125.3 147.8 138.6 REMARK 620 7 HOH A1173 O 80.4 119.4 117.7 82.5 153.4 67.4 REMARK 620 8 HOH A1186 O 80.7 77.8 80.4 136.1 68.9 69.7 135.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 135 OD1 REMARK 620 2 ASP A 135 OD2 50.8 REMARK 620 3 HOH A 825 O 71.3 113.9 REMARK 620 4 HOH A 896 O 104.0 131.4 86.6 REMARK 620 5 HOH A1060 O 84.3 69.2 77.0 158.3 REMARK 620 6 HOH A1209 O 126.0 75.3 149.0 109.9 79.5 REMARK 620 7 HOH A1364 O 149.3 133.8 82.8 90.3 73.9 71.4 REMARK 620 N 1 2 3 4 5 6 DBREF 6RY1 A 30 449 UNP G0S3F2 G0S3F2_CHATD 30 449 SEQADV 6RY1 MET A 7 UNP G0S3F2 INITIATING METHIONINE SEQADV 6RY1 GLY A 8 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 9 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 10 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 11 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 12 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 13 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 14 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 15 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 16 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 17 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 18 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 GLY A 19 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 LEU A 20 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 VAL A 21 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 PRO A 22 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 ARG A 23 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 GLY A 24 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 25 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 HIS A 26 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 MET A 27 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 ALA A 28 UNP G0S3F2 EXPRESSION TAG SEQADV 6RY1 SER A 29 UNP G0S3F2 EXPRESSION TAG SEQRES 1 A 443 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 443 LEU VAL PRO ARG GLY SER HIS MET ALA SER GLN GLN GLN SEQRES 3 A 443 TYR TYR LYS ILE ASP THR LYS GLU GLU ILE LEU GLU SER SEQRES 4 A 443 ALA ARG THR LEU ALA TYR ASP MET MET LEU PHE TYR LYS SEQRES 5 A 443 GLY ASN GLN SER GLY GLU ILE PRO GLY ILE LEU PRO GLY SEQRES 6 A 443 PRO PRO THR GLU HIS LYS GLY ASP TYR TYR TRP TRP GLU SEQRES 7 A 443 GLY GLY ALA MET MET GLY THR TYR VAL ASP TYR TRP HIS SEQRES 8 A 443 LEU THR GLY ASP PRO SER TYR ASN HIS VAL ILE MET GLU SEQRES 9 A 443 GLY MET LEU HIS GLN VAL GLY PRO ASN ALA ASP TYR GLN SEQRES 10 A 443 PRO PRO ASN HIS THR ALA SER LEU GLY ASN ASP ASP GLN SEQRES 11 A 443 GLY PHE TRP GLY MET SER ALA MET LEU ALA ALA GLU ASN SEQRES 12 A 443 LYS PHE PRO ASN PRO PRO ASP ASP LYS PRO GLN TRP LEU SEQRES 13 A 443 ALA LEU ALA GLN ALA VAL TRP THR THR GLN ALA SER PRO SEQRES 14 A 443 GLU ARG HIS ASP GLY THR CYS ASN GLY GLY LEU ARG TRP SEQRES 15 A 443 GLN ILE PRO PRO THR ASN ALA GLY TYR ASN TYR LYS ASN SEQRES 16 A 443 THR ILE ALA ASN ALA CYS PHE PHE ASP LEU GLY ALA ARG SEQRES 17 A 443 LEU ALA ARG TYR THR LYS ASN ASN THR TYR ALA GLU TRP SEQRES 18 A 443 ALA GLU LYS ILE PHE ASP TRP LEU TYR ALA VAL GLY TYR SEQRES 19 A 443 ILE ASP HIS GLU THR TRP ALA VAL TYR ASP GLY GLY HIS SEQRES 20 A 443 VAL GLU HIS ASN CYS THR ASP ILE ASN ARG ALA GLN PHE SEQRES 21 A 443 SER TYR ASN ALA ALA LEU LEU LEU HIS GLY ALA ALA PHE SEQRES 22 A 443 MET TRP ASN TYR THR GLU ASP GLN LYS TRP LYS ASP ARG SEQRES 23 A 443 VAL ASP ASN LEU LEU THR GLY ILE LEU ARG ASP PHE PHE SEQRES 24 A 443 LYS ASP GLY VAL VAL PHE GLU ILE PRO CYS GLU GLY ARG SEQRES 25 A 443 GLN GLY ALA CYS THR ALA ASP MET LEU THR PHE LYS GLY SEQRES 26 A 443 TYR VAL HIS ARG TRP MET ALA VAL VAL THR GLN ILE ALA SEQRES 27 A 443 PRO HIS THR LYS ASP ARG ILE LEU PRO VAL LEU ARG THR SEQRES 28 A 443 SER ALA GLU ALA ALA VAL LYS GLN CYS VAL GLY PRO PRO SEQRES 29 A 443 THR GLY ARG ARG CYS GLY PHE TYR TRP LYS SER GLY LYS SEQRES 30 A 443 PHE VAL ASP PRO SER VAL ASP HIS THR SER GLY ALA GLY SEQRES 31 A 443 GLU ALA MET SER VAL LEU ALA ALA VAL SER SER LEU LEU SEQRES 32 A 443 ILE GLU TYR ALA GLU PRO PRO ALA THR ASN GLU THR GLY SEQRES 33 A 443 ILE SER ARG GLY ASP PRO ASN ALA GLY MET ARG SER ARG SEQRES 34 A 443 GLY ALA ALA GLN HIS PHE ARG GLU ILE ASN ALA GLY ASP SEQRES 35 A 443 ARG HET ACT A 701 7 HET CA A 702 1 HET CA A 703 1 HET PGE A 704 24 HET MAN A 705 23 HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 CA 2(CA 2+) FORMUL 5 PGE C6 H14 O4 FORMUL 6 MAN C6 H12 O6 FORMUL 7 HOH *665(H2 O) HELIX 1 AA1 THR A 38 LEU A 55 1 18 HELIX 2 AA2 PRO A 72 HIS A 76 5 5 HELIX 3 AA3 TYR A 81 GLY A 100 1 20 HELIX 4 AA4 TYR A 104 GLN A 115 1 12 HELIX 5 AA5 PRO A 124 LEU A 131 5 8 HELIX 6 AA6 GLY A 132 ASN A 149 1 18 HELIX 7 AA7 GLN A 160 ALA A 173 1 14 HELIX 8 AA8 SER A 174 HIS A 178 5 5 HELIX 9 AA9 GLY A 180 GLY A 184 5 5 HELIX 10 AB1 THR A 202 LYS A 220 1 19 HELIX 11 AB2 ASN A 221 VAL A 238 1 18 HELIX 12 AB3 GLU A 255 ASN A 257 5 3 HELIX 13 AB4 PHE A 266 GLU A 285 1 20 HELIX 14 AB5 ASP A 286 PHE A 304 1 19 HELIX 15 AB6 ASP A 325 LEU A 327 5 3 HELIX 16 AB7 THR A 328 ALA A 344 1 17 HELIX 17 AB8 THR A 347 GLN A 365 1 19 HELIX 18 AB9 ASP A 386 HIS A 391 5 6 HELIX 19 AC1 GLY A 394 SER A 407 1 14 HELIX 20 AC2 LEU A 408 ALA A 413 5 6 HELIX 21 AC3 GLY A 436 PHE A 441 5 6 SHEET 1 AA1 2 TYR A 199 ASN A 201 0 SHEET 2 AA1 2 GLY A 251 HIS A 253 -1 O GLY A 252 N LYS A 200 SHEET 1 AA2 2 PHE A 305 LYS A 306 0 SHEET 2 AA2 2 VAL A 309 VAL A 310 -1 O VAL A 309 N LYS A 306 SSBOND 1 CYS A 182 CYS A 258 1555 1555 2.06 SSBOND 2 CYS A 315 CYS A 322 1555 1555 2.03 SSBOND 3 CYS A 366 CYS A 375 1555 1555 2.07 LINK OD1 ASP A 79 CA CA A 702 1555 1555 2.28 LINK OD1 ASP A 135 CA CA A 703 1555 1555 2.29 LINK OD2 ASP A 135 CA CA A 703 1555 1555 2.60 LINK OE1 GLU A 285 CA CA A 702 1555 3455 2.51 LINK OE2 GLU A 285 CA CA A 702 1555 3455 2.43 LINK O HIS A 391 CA CA A 702 1555 1555 2.48 LINK CA CA A 702 O HOH A 970 1555 1555 2.27 LINK CA CA A 702 O HOH A1091 1555 1555 2.35 LINK CA CA A 702 O HOH A1173 1555 1555 2.31 LINK CA CA A 702 O HOH A1186 1555 1555 2.37 LINK CA CA A 703 O HOH A 825 1555 1555 2.13 LINK CA CA A 703 O HOH A 896 1555 1555 2.92 LINK CA CA A 703 O HOH A1060 1555 1555 2.40 LINK CA CA A 703 O HOH A1209 1555 1555 2.45 LINK CA CA A 703 O HOH A1364 1555 1555 2.63 CISPEP 1 GLY A 71 PRO A 72 0 5.26 CISPEP 2 PRO A 369 PRO A 370 0 6.69 CRYST1 83.855 55.022 80.458 90.00 90.45 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011925 0.000000 0.000094 0.00000 SCALE2 0.000000 0.018175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012429 0.00000