HEADER HYDROLASE 14-JUN-19 6S0H TITLE STRUCTURE OF IMP-13 METALLO-BETA-LACTAMASE COMPLEXED WITH HYDROLYSED TITLE 2 DORIPENEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLA-IMP13, BLA-IMP13, BLAIMP-13; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METALLO-BETA-LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.ZAK,C.SOFTLEY,M.KOLONKO,M.SATTLER,G.M.POPOWICZ REVDAT 5 15-MAY-24 6S0H 1 LINK REVDAT 4 03-JUN-20 6S0H 1 JRNL REVDAT 3 29-APR-20 6S0H 1 JRNL REVDAT 2 15-APR-20 6S0H 1 TITLE REVDAT 1 01-APR-20 6S0H 0 JRNL AUTH C.A.SOFTLEY,K.M.ZAK,M.J.BOSTOCK,R.FINO,R.X.ZHOU,M.KOLONKO, JRNL AUTH 2 R.MEJDI-NITIU,H.MEYER,M.SATTLER,G.M.POPOWICZ JRNL TITL STRUCTURE AND MOLECULAR RECOGNITION MECHANISM OF IMP-13 JRNL TITL 2 METALLO-BETA-LACTAMASE. JRNL REF ANTIMICROB.AGENTS CHEMOTHER. V. 64 2020 JRNL REFN ESSN 1098-6596 JRNL PMID 32205343 JRNL DOI 10.1128/AAC.00123-20 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 11394 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 632 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 833 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.09 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.62000 REMARK 3 B22 (A**2) : 8.25000 REMARK 3 B33 (A**2) : -2.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -7.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.426 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3588 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3344 ; 0.035 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4851 ; 1.593 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7801 ; 2.353 ; 1.596 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 431 ; 7.136 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 147 ;35.593 ;24.830 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 619 ;18.142 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;12.385 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 455 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3901 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 699 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1730 ; 4.618 ; 7.114 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1729 ; 4.611 ; 7.114 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2159 ; 7.238 ;10.672 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6S0H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292102908. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12023 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 45.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM HEPES PH 7.5, 25% PEG REMARK 280 2000 MME, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.15900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 SER A 220 REMARK 465 LYS A 221 REMARK 465 LYS A 222 REMARK 465 THR A 223 REMARK 465 SER A 224 REMARK 465 SER A 225 REMARK 465 PRO A 226 REMARK 465 SER A 227 REMARK 465 ASN A 228 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 SER B 220 REMARK 465 LYS B 221 REMARK 465 LYS B 222 REMARK 465 THR B 223 REMARK 465 SER B 224 REMARK 465 SER B 225 REMARK 465 PRO B 226 REMARK 465 SER B 227 REMARK 465 ASN B 228 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 13 -175.32 -170.75 REMARK 500 ASN A 26 122.96 -30.17 REMARK 500 ASN A 41 -122.88 54.81 REMARK 500 ASP A 48 145.17 68.46 REMARK 500 PRO A 50 171.48 -59.76 REMARK 500 HIS A 163 50.98 -144.17 REMARK 500 LYS A 218 44.71 -65.06 REMARK 500 LYS A 218 49.34 -65.06 REMARK 500 ASN B 26 127.22 -33.99 REMARK 500 ASN B 41 -120.76 52.68 REMARK 500 ASP B 48 145.84 70.40 REMARK 500 PRO B 50 171.20 -58.04 REMARK 500 ASN B 167 -80.50 -39.26 REMARK 500 LEU B 168 -20.76 89.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 77 NE2 REMARK 620 2 HIS A 79 ND1 105.0 REMARK 620 3 HIS A 139 NE2 100.4 113.6 REMARK 620 4 KQ8 A 310 O4 98.5 83.2 150.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 81 OD2 REMARK 620 2 CYS A 158 SG 98.9 REMARK 620 3 HIS A 197 NE2 93.1 103.0 REMARK 620 4 KQ8 A 310 O 163.2 91.6 71.8 REMARK 620 5 KQ8 A 310 O3 84.8 101.7 155.2 105.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 77 NE2 REMARK 620 2 HIS B 79 ND1 98.0 REMARK 620 3 HIS B 139 NE2 104.1 102.5 REMARK 620 4 KQ8 B 404 O3 112.1 93.2 138.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 81 OD2 REMARK 620 2 CYS B 158 SG 100.3 REMARK 620 3 HIS B 197 NE2 91.0 105.5 REMARK 620 4 KQ8 B 404 O 165.5 93.8 82.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KQ8 A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KQ8 B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6R79 RELATED DB: PDB DBREF 6S0H A 3 228 UNP Q7WYA8 Q7WYA8_PSEAI 21 246 DBREF 6S0H B 3 228 UNP Q7WYA8 Q7WYA8_PSEAI 21 246 SEQADV 6S0H GLY A 2 UNP Q7WYA8 EXPRESSION TAG SEQADV 6S0H GLY B 2 UNP Q7WYA8 EXPRESSION TAG SEQRES 1 A 227 GLY ALA LEU PRO ASP LEU LYS ILE GLU LYS LEU GLU GLU SEQRES 2 A 227 GLY VAL PHE VAL HIS THR SER PHE GLU GLU VAL ASN GLY SEQRES 3 A 227 TRP GLY VAL VAL THR LYS HIS GLY LEU VAL VAL LEU VAL SEQRES 4 A 227 ASN THR ASP ALA TYR LEU ILE ASP THR PRO PHE THR ALA SEQRES 5 A 227 THR ASP THR GLU LYS LEU VAL ASN TRP PHE VAL GLU ARG SEQRES 6 A 227 GLY TYR GLU ILE LYS GLY THR ILE SER SER HIS PHE HIS SEQRES 7 A 227 SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER GLN SEQRES 8 A 227 SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU LEU SEQRES 9 A 227 LEU LYS LYS SER GLY LYS VAL GLN ALA LYS TYR SER PHE SEQRES 10 A 227 SER GLU VAL SER TYR TRP LEU VAL LYS ASN LYS ILE GLU SEQRES 11 A 227 VAL PHE TYR PRO GLY PRO GLY HIS THR GLN ASP ASN LEU SEQRES 12 A 227 VAL VAL TRP LEU PRO GLU SER LYS ILE LEU PHE GLY GLY SEQRES 13 A 227 CYS PHE ILE LYS PRO HIS GLY LEU GLY ASN LEU GLY ASP SEQRES 14 A 227 ALA ASN LEU GLU ALA TRP PRO LYS SER ALA LYS ILE LEU SEQRES 15 A 227 MET SER LYS TYR GLY LYS ALA LYS LEU VAL VAL SER SER SEQRES 16 A 227 HIS SER GLU LYS GLY ASP ALA SER LEU MET LYS ARG THR SEQRES 17 A 227 TRP GLU GLN ALA LEU LYS GLY LEU LYS GLU SER LYS LYS SEQRES 18 A 227 THR SER SER PRO SER ASN SEQRES 1 B 227 GLY ALA LEU PRO ASP LEU LYS ILE GLU LYS LEU GLU GLU SEQRES 2 B 227 GLY VAL PHE VAL HIS THR SER PHE GLU GLU VAL ASN GLY SEQRES 3 B 227 TRP GLY VAL VAL THR LYS HIS GLY LEU VAL VAL LEU VAL SEQRES 4 B 227 ASN THR ASP ALA TYR LEU ILE ASP THR PRO PHE THR ALA SEQRES 5 B 227 THR ASP THR GLU LYS LEU VAL ASN TRP PHE VAL GLU ARG SEQRES 6 B 227 GLY TYR GLU ILE LYS GLY THR ILE SER SER HIS PHE HIS SEQRES 7 B 227 SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER GLN SEQRES 8 B 227 SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU LEU SEQRES 9 B 227 LEU LYS LYS SER GLY LYS VAL GLN ALA LYS TYR SER PHE SEQRES 10 B 227 SER GLU VAL SER TYR TRP LEU VAL LYS ASN LYS ILE GLU SEQRES 11 B 227 VAL PHE TYR PRO GLY PRO GLY HIS THR GLN ASP ASN LEU SEQRES 12 B 227 VAL VAL TRP LEU PRO GLU SER LYS ILE LEU PHE GLY GLY SEQRES 13 B 227 CYS PHE ILE LYS PRO HIS GLY LEU GLY ASN LEU GLY ASP SEQRES 14 B 227 ALA ASN LEU GLU ALA TRP PRO LYS SER ALA LYS ILE LEU SEQRES 15 B 227 MET SER LYS TYR GLY LYS ALA LYS LEU VAL VAL SER SER SEQRES 16 B 227 HIS SER GLU LYS GLY ASP ALA SER LEU MET LYS ARG THR SEQRES 17 B 227 TRP GLU GLN ALA LEU LYS GLY LEU LYS GLU SER LYS LYS SEQRES 18 B 227 THR SER SER PRO SER ASN HET ZN A 301 1 HET ZN A 302 1 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET KQ8 A 310 28 HET EDO B 401 4 HET ZN B 402 1 HET ZN B 403 1 HET KQ8 B 404 28 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM KQ8 (2~{R},3~{R})-2-[(2~{S},3~{R})-1,3-BIS(OXIDANYL)-1- HETNAM 2 KQ8 OXIDANYLIDENE-BUTAN-2-YL]-3-METHYL-4-[(3~{S},5~{S})-5- HETNAM 3 KQ8 [(SULFAMOYLAMINO)METHYL]PYRROLIDIN-3-YL]SULFANYL-2,3- HETNAM 4 KQ8 DIHYDRO-1~{H}-PYRROLE-5-CARBOXYLIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 4(ZN 2+) FORMUL 5 EDO 8(C2 H6 O2) FORMUL 12 KQ8 2(C15 H26 N4 O7 S2) FORMUL 17 HOH *31(H2 O) HELIX 1 AA1 THR A 52 ARG A 66 1 15 HELIX 2 AA2 HIS A 79 GLY A 84 1 6 HELIX 3 AA3 GLY A 85 GLN A 92 1 8 HELIX 4 AA4 GLU A 100 SER A 109 1 10 HELIX 5 AA5 CYS A 158 ILE A 160 5 3 HELIX 6 AA6 ALA A 175 GLY A 188 1 14 HELIX 7 AA7 ALA A 203 LYS A 218 1 16 HELIX 8 AA8 THR B 52 ARG B 66 1 15 HELIX 9 AA9 HIS B 79 GLY B 84 1 6 HELIX 10 AB1 GLY B 85 GLN B 92 1 8 HELIX 11 AB2 GLU B 100 SER B 109 1 10 HELIX 12 AB3 CYS B 158 ILE B 160 5 3 HELIX 13 AB4 ALA B 175 GLY B 188 1 14 HELIX 14 AB5 ALA B 203 GLU B 219 1 17 SHEET 1 AA1 7 LYS A 8 GLU A 13 0 SHEET 2 AA1 7 VAL A 16 VAL A 25 -1 O VAL A 16 N LEU A 12 SHEET 3 AA1 7 GLY A 29 VAL A 40 -1 O VAL A 31 N GLU A 23 SHEET 4 AA1 7 ASP A 43 ILE A 47 -1 O ILE A 47 N LEU A 36 SHEET 5 AA1 7 GLU A 69 ILE A 74 1 O GLU A 69 N ALA A 44 SHEET 6 AA1 7 THR A 96 SER A 99 1 O TYR A 97 N THR A 73 SHEET 7 AA1 7 TYR A 116 PHE A 118 1 O TYR A 116 N THR A 96 SHEET 1 AA2 5 SER A 122 VAL A 126 0 SHEET 2 AA2 5 ILE A 130 PHE A 133 -1 O VAL A 132 N TYR A 123 SHEET 3 AA2 5 VAL A 145 LEU A 148 -1 O TRP A 147 N GLU A 131 SHEET 4 AA2 5 ILE A 153 GLY A 157 -1 O PHE A 155 N VAL A 146 SHEET 5 AA2 5 LEU A 192 SER A 195 1 O VAL A 194 N GLY A 156 SHEET 1 AA3 7 LYS B 8 GLU B 13 0 SHEET 2 AA3 7 VAL B 16 VAL B 25 -1 O VAL B 16 N LEU B 12 SHEET 3 AA3 7 GLY B 29 VAL B 40 -1 O VAL B 31 N GLU B 23 SHEET 4 AA3 7 ASP B 43 ILE B 47 -1 O ILE B 47 N LEU B 36 SHEET 5 AA3 7 GLU B 69 ILE B 74 1 O GLU B 69 N ALA B 44 SHEET 6 AA3 7 THR B 96 SER B 99 1 O TYR B 97 N THR B 73 SHEET 7 AA3 7 TYR B 116 PHE B 118 1 O TYR B 116 N THR B 96 SHEET 1 AA4 5 SER B 122 VAL B 126 0 SHEET 2 AA4 5 ILE B 130 PHE B 133 -1 O VAL B 132 N TYR B 123 SHEET 3 AA4 5 VAL B 145 LEU B 148 -1 O TRP B 147 N GLU B 131 SHEET 4 AA4 5 ILE B 153 GLY B 157 -1 O PHE B 155 N VAL B 146 SHEET 5 AA4 5 LEU B 192 SER B 195 1 O VAL B 194 N GLY B 156 LINK NE2 HIS A 77 ZN ZN A 301 1555 1555 2.25 LINK ND1 HIS A 79 ZN ZN A 301 1555 1555 1.90 LINK OD2 ASP A 81 ZN ZN A 302 1555 1555 2.00 LINK NE2 HIS A 139 ZN ZN A 301 1555 1555 1.97 LINK SG CYS A 158 ZN ZN A 302 1555 1555 2.42 LINK NE2 HIS A 197 ZN ZN A 302 1555 1555 2.08 LINK ZN ZN A 301 O4 KQ8 A 310 1555 1555 2.40 LINK ZN ZN A 302 O KQ8 A 310 1555 1555 2.42 LINK ZN ZN A 302 O3 KQ8 A 310 1555 1555 1.89 LINK NE2 HIS B 77 ZN ZN B 402 1555 1555 2.15 LINK ND1 HIS B 79 ZN ZN B 402 1555 1555 2.19 LINK OD2 ASP B 81 ZN ZN B 403 1555 1555 2.00 LINK NE2 HIS B 139 ZN ZN B 402 1555 1555 1.95 LINK SG CYS B 158 ZN ZN B 403 1555 1555 2.39 LINK NE2 HIS B 197 ZN ZN B 403 1555 1555 2.11 LINK ZN ZN B 402 O3 KQ8 B 404 1555 1555 2.07 LINK ZN ZN B 403 O KQ8 B 404 1555 1555 2.51 SITE 1 AC1 4 HIS A 77 HIS A 79 HIS A 139 KQ8 A 310 SITE 1 AC2 4 ASP A 81 CYS A 158 HIS A 197 KQ8 A 310 SITE 1 AC3 4 GLU A 69 ILE A 70 SER A 93 LYS B 127 SITE 1 AC4 5 SER A 99 LEU A 101 TYR A 134 ASP A 142 SITE 2 AC4 5 LEU A 144 SITE 1 AC5 4 THR A 42 ASP A 43 GLY A 67 GLU A 69 SITE 1 AC6 5 GLU A 10 HIS A 34 SER A 198 GLU A 199 SITE 2 AC6 5 LYS A 200 SITE 1 AC7 1 ASN A 128 SITE 1 AC8 15 TRP A 28 VAL A 30 THR A 32 PHE A 51 SITE 2 AC8 15 HIS A 77 HIS A 79 ASP A 81 HIS A 139 SITE 3 AC8 15 CYS A 158 LYS A 161 LEU A 165 ASN A 167 SITE 4 AC8 15 HIS A 197 ZN A 301 ZN A 302 SITE 1 AC9 3 GLN A 113 SER B 119 GLU B 120 SITE 1 AD1 4 HIS B 77 HIS B 79 HIS B 139 KQ8 B 404 SITE 1 AD2 4 ASP B 81 CYS B 158 HIS B 197 KQ8 B 404 SITE 1 AD3 19 VAL B 25 TRP B 28 VAL B 30 VAL B 31 SITE 2 AD3 19 THR B 32 PHE B 51 HIS B 77 HIS B 79 SITE 3 AD3 19 SER B 80 ASP B 81 HIS B 139 CYS B 158 SITE 4 AD3 19 LYS B 161 LEU B 165 GLY B 166 ASN B 167 SITE 5 AD3 19 HIS B 197 ZN B 402 ZN B 403 CRYST1 61.430 72.318 62.933 90.00 111.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016279 0.000000 0.006485 0.00000 SCALE2 0.000000 0.013828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017104 0.00000