HEADER VIRAL PROTEIN 21-JUN-19 6S2O TITLE GRANULOVIRUS OCCLUSION BODIES BY SERIAL ELECTRON DIFFRACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GRANULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MATRIX PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYDIA POMONELLA GRANULOSIS VIRUS (ISOLATE SOURCE 3 MEXICO/1963); SOURCE 4 ORGANISM_COMMON: CPGV; SOURCE 5 ORGANISM_TAXID: 654905; SOURCE 6 STRAIN: ISOLATE MEXICO/1963; SOURCE 7 EXPRESSION_SYSTEM: CYDIA POMONELLA GRANULOSIS VIRUS (ISOLATE SOURCE 8 MEXICAN); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 654905 KEYWDS GRANULOVIRUS, OCCLUSION BODY, SERIAL CRYSTALLOGRAPHY, VIRAL PROTEIN EXPDTA ELECTRON CRYSTALLOGRAPHY AUTHOR R.BUECKER,P.MEHRABI,E.C.SCHULZ,P.HOGAN-LAMARRE REVDAT 3 18-NOV-20 6S2O 1 JRNL REVDAT 2 11-NOV-20 6S2O 1 JRNL REVDAT 1 29-APR-20 6S2O 0 JRNL AUTH R.BUCKER,P.HOGAN-LAMARRE,P.MEHRABI,E.C.SCHULZ,L.A.BULTEMA, JRNL AUTH 2 Y.GEVORKOV,W.BREHM,O.YEFANOV,D.OBERTHUR,G.H.KASSIER, JRNL AUTH 3 R.J.DWAYNE MILLER JRNL TITL SERIAL PROTEIN CRYSTALLOGRAPHY IN AN ELECTRON MICROSCOPE. JRNL REF NAT COMMUN V. 11 996 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32081905 JRNL DOI 10.1038/S41467-020-14793-0 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 72.9700 - 3.2300 1.00 2906 162 0.1282 0.1383 REMARK 3 2 3.2200 - 2.5600 1.00 2858 129 0.1556 0.1883 REMARK 3 3 2.5600 - 2.2400 1.00 2844 119 0.1696 0.1908 REMARK 3 4 2.2400 - 2.0300 1.00 2817 117 0.1661 0.2206 REMARK 3 5 2.0300 - 1.8900 1.00 2790 174 0.1754 0.2051 REMARK 3 6 1.8900 - 1.7700 1.00 2770 163 0.2134 0.2740 REMARK 3 7 1.7700 - 1.6900 1.00 2800 134 0.2365 0.2832 REMARK 3 8 1.6900 - 1.6100 1.00 2783 138 0.2844 0.3084 REMARK 3 9 1.6100 - 1.5500 1.00 2770 161 0.3242 0.3601 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.198 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2099 REMARK 3 ANGLE : 1.131 2854 REMARK 3 CHIRALITY : 0.077 300 REMARK 3 PLANARITY : 0.007 373 REMARK 3 DIHEDRAL : 6.121 278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292102995. REMARK 240 REMARK 240 EXPERIMENTAL DETAILS REMARK 240 RECONSTRUCTION METHOD : CRYSTALLOGRAPHY REMARK 240 SAMPLE TYPE : 3D ARRAY REMARK 240 SPECIMEN TYPE : NULL REMARK 240 DATA ACQUISITION REMARK 240 DATE OF DATA COLLECTION : NULL REMARK 240 TEMPERATURE (KELVIN) : NULL REMARK 240 PH : NULL REMARK 240 NUMBER OF CRYSTALS USED : NULL REMARK 240 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 240 DETECTOR TYPE : OTHER REMARK 240 ACCELERATION VOLTAGE (KV) : 200 REMARK 240 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 240 RESOLUTION RANGE HIGH (A) : NULL REMARK 240 RESOLUTION RANGE LOW (A) : NULL REMARK 240 DATA SCALING SOFTWARE : NULL REMARK 240 COMPLETENESS FOR RANGE (%) : NULL REMARK 240 DATA REDUNDANCY : NULL REMARK 240 IN THE HIGHEST RESOLUTION SHELL REMARK 240 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) :NULL REMARK 240 HIGHEST RESOLUTION SHELL, RANGE LOW (A) :NULL REMARK 240 COMPLETENESS FOR SHELL (%) : NULL REMARK 240 DATA REDUNDANCY IN SHELL : NULL REMARK 240 R MERGE FOR SHELL (I) : NULL REMARK 240 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 240 SOFTWARE USED : NULL REMARK 240 STARTING MODEL : NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 51.60000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 51.60000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 51.60000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 51.60000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 51.60000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 51.60000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 74910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 126610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -442.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 TYR A 3 REMARK 465 ASN A 4 REMARK 465 LYS A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 10 -123.25 58.58 REMARK 500 ASN A 21 -14.87 77.98 REMARK 500 CYS A 185 -161.51 -110.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10091 RELATED DB: EMDB REMARK 900 GRANULOVIRUS OCCLUSION BODIES BY SERIAL ELECTRON DIFFRACTION DBREF 6S2O A 1 248 UNP P87577 GRAN_GVCPM 1 248 SEQRES 1 A 248 MET GLY TYR ASN LYS SER LEU ARG TYR SER ARG HIS ASP SEQRES 2 A 248 GLY THR SER CYS VAL ILE ASP ASN HIS HIS LEU LYS SER SEQRES 3 A 248 LEU GLY ALA VAL LEU ASN ASP VAL ARG ARG LYS LYS ASP SEQRES 4 A 248 ARG ILE ARG GLU ALA GLU TYR GLU PRO ILE ILE ASP ILE SEQRES 5 A 248 ALA ASP GLN TYR MET VAL THR GLU ASP PRO PHE ARG GLY SEQRES 6 A 248 PRO GLY LYS ASN VAL ARG ILE THR LEU PHE LYS GLU ILE SEQRES 7 A 248 ARG ARG VAL HIS PRO ASP THR MET LYS LEU VAL CYS ASN SEQRES 8 A 248 TRP SER GLY LYS GLU PHE LEU ARG GLU THR TRP THR ARG SEQRES 9 A 248 PHE ILE SER GLU GLU PHE PRO ILE THR THR ASP GLN GLU SEQRES 10 A 248 ILE MET ASP LEU TRP PHE GLU LEU GLN LEU ARG PRO MET SEQRES 11 A 248 HIS PRO ASN ARG CYS TYR LYS PHE THR MET GLN TYR ALA SEQRES 12 A 248 LEU GLY ALA HIS PRO ASP TYR VAL ALA HIS ASP VAL ILE SEQRES 13 A 248 ARG GLN GLN ASP PRO TYR TYR VAL GLY PRO ASN ASN ILE SEQRES 14 A 248 GLU ARG ILE ASN LEU SER LYS LYS GLY PHE ALA PHE PRO SEQRES 15 A 248 LEU THR CYS LEU GLN SER VAL TYR ASN ASP ASN PHE GLU SEQRES 16 A 248 ARG PHE PHE ASP ASP VAL LEU TRP PRO TYR PHE TYR ARG SEQRES 17 A 248 PRO LEU VAL TYR VAL GLY THR THR SER ALA GLU ILE GLU SEQRES 18 A 248 GLU ILE MET ILE GLU VAL SER LEU LEU PHE LYS ILE LYS SEQRES 19 A 248 GLU PHE ALA PRO ASP VAL PRO LEU PHE THR GLY PRO ALA SEQRES 20 A 248 TYR FORMUL 2 HOH *90(H2 O) HELIX 1 AA1 SER A 26 ASP A 54 1 29 HELIX 2 AA2 SER A 93 PHE A 110 1 18 HELIX 3 AA3 ASN A 193 ASP A 200 1 8 SHEET 1 AA1 2 SER A 16 ILE A 19 0 SHEET 2 AA1 2 HIS A 22 LYS A 25 -1 O LEU A 24 N CYS A 17 SHEET 1 AA2 4 LYS A 68 VAL A 81 0 SHEET 2 AA2 4 GLU A 221 PHE A 236 -1 O LEU A 229 N ILE A 72 SHEET 3 AA2 4 ASP A 115 PRO A 129 -1 N GLU A 124 O SER A 228 SHEET 4 AA2 4 ILE A 169 LEU A 174 -1 O LEU A 174 N LEU A 121 SHEET 1 AA3 5 VAL A 155 ARG A 157 0 SHEET 2 AA3 5 THR A 85 LEU A 88 -1 N MET A 86 O ILE A 156 SHEET 3 AA3 5 TYR A 207 THR A 215 -1 O VAL A 213 N LYS A 87 SHEET 4 AA3 5 PHE A 138 GLY A 145 -1 N GLN A 141 O TYR A 212 SHEET 5 AA3 5 TYR A 162 TYR A 163 -1 O TYR A 162 N MET A 140 SSBOND 1 CYS A 135 CYS A 135 1555 2555 2.25 CISPEP 1 PHE A 110 PRO A 111 0 -2.45 CISPEP 2 GLY A 245 PRO A 246 0 -3.97 CRYST1 103.200 103.200 103.200 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009690 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009690 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009690 0.00000