HEADER TRANSPORT PROTEIN 01-JUL-19 6S5C TITLE SQUARE CONFORMATION OF KTRA WT RING WITH BOUND ATP AND CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: KTR SYSTEM POTASSIUM UPTAKE PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: K(+)-UPTAKE PROTEIN KTRA,REGULATORY PROTEIN OF KTR CATION COMPND 5 CHANNEL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 GENE: KTRA, YUAA, BSU31090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RCK DOMAIN, POTASSIUM HOMEOSTASIS, CATION CHANNEL, CALCIUM, SQUARE KEYWDS 2 CONFORMATION OCTAMERIC RING, ATP, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.M.TEIXEIRA-DUARTE,F.FONSECA,J.H.MORAIS-CABRAL REVDAT 2 24-JAN-24 6S5C 1 REMARK LINK REVDAT 1 08-JAN-20 6S5C 0 JRNL AUTH C.M.TEIXEIRA-DUARTE,F.FONSECA,J.H.MORAIS CABRAL JRNL TITL ACTIVATION OF A NUCLEOTIDE-DEPENDENT RCK DOMAIN REQUIRES JRNL TITL 2 BINDING OF A CATION COFACTOR TO A CONSERVED SITE. JRNL REF ELIFE V. 8 2019 JRNL REFN ESSN 2050-084X JRNL PMID 31868587 JRNL DOI 10.7554/ELIFE.50661 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8105 - 7.2059 0.99 1624 131 0.1516 0.1963 REMARK 3 2 7.2059 - 5.7260 1.00 1611 144 0.2220 0.2212 REMARK 3 3 5.7260 - 5.0040 1.00 1602 166 0.1975 0.2586 REMARK 3 4 5.0040 - 4.5473 1.00 1621 121 0.1849 0.2522 REMARK 3 5 4.5473 - 4.2219 1.00 1632 108 0.1904 0.2718 REMARK 3 6 4.2219 - 3.9732 1.00 1646 122 0.2387 0.2329 REMARK 3 7 3.9732 - 3.7744 1.00 1616 164 0.2752 0.3374 REMARK 3 8 3.7744 - 3.6103 1.00 1563 151 0.2687 0.3195 REMARK 3 9 3.6103 - 3.4714 1.00 1624 163 0.2878 0.4307 REMARK 3 10 3.4714 - 3.3517 1.00 1610 136 0.2857 0.3512 REMARK 3 11 3.3517 - 3.2469 1.00 1611 120 0.3383 0.3886 REMARK 3 12 3.2469 - 3.1542 1.00 1676 84 0.3395 0.4096 REMARK 3 13 3.1542 - 3.0712 1.00 1659 154 0.3383 0.4113 REMARK 3 14 3.0712 - 2.9963 0.97 1549 142 0.3418 0.4355 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.620 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3534 REMARK 3 ANGLE : 0.697 4788 REMARK 3 CHIRALITY : 0.026 552 REMARK 3 PLANARITY : 0.002 600 REMARK 3 DIHEDRAL : 13.136 1320 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.6134 19.8548 -25.3178 REMARK 3 T TENSOR REMARK 3 T11: 1.2950 T22: 1.4994 REMARK 3 T33: 0.9364 T12: -0.5825 REMARK 3 T13: -0.0401 T23: 0.1937 REMARK 3 L TENSOR REMARK 3 L11: 6.1944 L22: 6.1421 REMARK 3 L33: 9.8877 L12: -2.8246 REMARK 3 L13: 1.4218 L23: 1.4310 REMARK 3 S TENSOR REMARK 3 S11: -1.0646 S12: 1.2435 S13: -0.0821 REMARK 3 S21: -1.7648 S22: 0.7403 S23: 0.2318 REMARK 3 S31: -0.8778 S32: 0.6133 S33: 0.2573 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.5199 10.2471 -16.5373 REMARK 3 T TENSOR REMARK 3 T11: 1.0368 T22: 1.5425 REMARK 3 T33: 1.0544 T12: -0.2308 REMARK 3 T13: 0.2084 T23: -0.1320 REMARK 3 L TENSOR REMARK 3 L11: 2.2524 L22: 2.2729 REMARK 3 L33: 2.1815 L12: -2.1793 REMARK 3 L13: -0.1108 L23: -1.2102 REMARK 3 S TENSOR REMARK 3 S11: -1.3999 S12: 1.3858 S13: -1.8110 REMARK 3 S21: -1.0734 S22: 1.1750 S23: -1.6047 REMARK 3 S31: -0.0326 S32: 1.6038 S33: 0.1480 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 146.6217 22.5282 -8.3258 REMARK 3 T TENSOR REMARK 3 T11: 0.9946 T22: 1.0905 REMARK 3 T33: 1.0591 T12: 0.0106 REMARK 3 T13: 0.1389 T23: 0.3376 REMARK 3 L TENSOR REMARK 3 L11: 6.4796 L22: 5.9184 REMARK 3 L33: 5.4684 L12: 1.2003 REMARK 3 L13: -2.1630 L23: 4.7334 REMARK 3 S TENSOR REMARK 3 S11: -0.7230 S12: 0.6395 S13: -0.5711 REMARK 3 S21: 0.1909 S22: 0.5926 S23: -0.4797 REMARK 3 S31: 0.3406 S32: 0.9529 S33: 0.3066 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 141.5239 53.1332 -1.2585 REMARK 3 T TENSOR REMARK 3 T11: 1.4728 T22: 1.1361 REMARK 3 T33: 1.3892 T12: -0.3798 REMARK 3 T13: -0.2893 T23: 0.2233 REMARK 3 L TENSOR REMARK 3 L11: 6.3387 L22: 5.0474 REMARK 3 L33: 8.1319 L12: 0.8078 REMARK 3 L13: -5.6943 L23: 3.0786 REMARK 3 S TENSOR REMARK 3 S11: 0.2408 S12: -0.8095 S13: 0.8815 REMARK 3 S21: 1.3106 S22: -0.4848 S23: 0.1737 REMARK 3 S31: -1.5595 S32: 1.2743 S33: 0.3140 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 133.5018 25.0778 8.0642 REMARK 3 T TENSOR REMARK 3 T11: 1.1677 T22: 1.3031 REMARK 3 T33: 1.0303 T12: 0.2266 REMARK 3 T13: 0.4265 T23: 0.3294 REMARK 3 L TENSOR REMARK 3 L11: 7.1234 L22: 6.7807 REMARK 3 L33: 5.7603 L12: 3.8813 REMARK 3 L13: 4.8415 L23: 1.2456 REMARK 3 S TENSOR REMARK 3 S11: -0.3512 S12: -0.8342 S13: -0.2518 REMARK 3 S21: 1.2646 S22: -0.1427 S23: 0.5630 REMARK 3 S31: 1.0408 S32: 1.1966 S33: 0.4864 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 120.6333 27.8892 2.8658 REMARK 3 T TENSOR REMARK 3 T11: 1.0067 T22: 1.1048 REMARK 3 T33: 1.6426 T12: -0.0129 REMARK 3 T13: 0.5008 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 9.3347 L22: 4.9307 REMARK 3 L33: 8.5908 L12: -0.2021 REMARK 3 L13: 1.5902 L23: 1.3355 REMARK 3 S TENSOR REMARK 3 S11: -0.5085 S12: -0.5098 S13: 0.3296 REMARK 3 S21: 1.0706 S22: -0.4981 S23: 2.0660 REMARK 3 S31: 0.8352 S32: -0.9423 S33: 0.9238 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 130.0306 32.3571 -12.3826 REMARK 3 T TENSOR REMARK 3 T11: 1.0510 T22: 1.0881 REMARK 3 T33: 1.2958 T12: -0.2444 REMARK 3 T13: -0.1577 T23: 0.5780 REMARK 3 L TENSOR REMARK 3 L11: 9.3777 L22: 4.2705 REMARK 3 L33: 2.4350 L12: 5.3174 REMARK 3 L13: -5.5422 L23: 2.8345 REMARK 3 S TENSOR REMARK 3 S11: -0.8029 S12: 0.1849 S13: 0.4641 REMARK 3 S21: -0.4805 S22: 0.0531 S23: 0.7291 REMARK 3 S31: -0.1517 S32: 0.3598 S33: 0.7628 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 154.3832 45.5012 -17.5461 REMARK 3 T TENSOR REMARK 3 T11: 1.7549 T22: 1.9468 REMARK 3 T33: 1.5124 T12: -0.9391 REMARK 3 T13: -0.1416 T23: 0.3896 REMARK 3 L TENSOR REMARK 3 L11: 8.9389 L22: 10.6514 REMARK 3 L33: 7.1413 L12: 2.2570 REMARK 3 L13: -1.7244 L23: 5.8396 REMARK 3 S TENSOR REMARK 3 S11: -1.5305 S12: 2.7939 S13: 1.3269 REMARK 3 S21: -2.5254 S22: 1.7704 S23: -0.9237 REMARK 3 S31: -1.8739 S32: 1.2473 S33: -0.2063 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 157.7056 45.9791 -14.0557 REMARK 3 T TENSOR REMARK 3 T11: 1.5477 T22: 2.0172 REMARK 3 T33: 1.3654 T12: -0.8243 REMARK 3 T13: -0.0859 T23: 0.3600 REMARK 3 L TENSOR REMARK 3 L11: 2.8452 L22: 4.5494 REMARK 3 L33: 3.3270 L12: -4.8507 REMARK 3 L13: -1.0644 L23: 5.1282 REMARK 3 S TENSOR REMARK 3 S11: -0.3099 S12: -0.5067 S13: 0.3513 REMARK 3 S21: -1.7670 S22: 1.2414 S23: -0.3729 REMARK 3 S31: -0.6592 S32: 0.2544 S33: -0.8706 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292102742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12614 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : 1.41800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S2J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES-NAOH PH 8.0, 5% PEG 6000, REMARK 280 2.5% 2-METHYL-2,4-PENTANEDIOL (MPD), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.34650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.34650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.00600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.34650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.34650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.00600 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 61.34650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 61.34650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.00600 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 61.34650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 61.34650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.00600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 245.38600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 122.69300 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -122.69300 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 122.69300 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 122.69300 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ARG A 3 REMARK 465 ILE A 4 REMARK 465 LYS A 5 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 ILE B 4 REMARK 465 LYS B 5 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 31 CB CG CD OE1 OE2 REMARK 480 GLU A 40 CB CG CD OE1 OE2 REMARK 480 ASN A 70 CB CG OD1 ND2 REMARK 480 GLU A 72 CB CG CD OE1 OE2 REMARK 480 GLU A 150 CB CG CD OE1 OE2 REMARK 480 ARG A 160 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 161 CG CD CE NZ REMARK 480 LYS A 165 CB CG CD CE NZ REMARK 480 ARG A 173 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 175 CB CG CD CE NZ REMARK 480 LYS A 184 CB CG CD CE NZ REMARK 480 ASP A 188 CB CG OD1 OD2 REMARK 480 GLU A 196 CB CG CD OE1 OE2 REMARK 480 ASP A 197 CB CG OD1 OD2 REMARK 480 ARG A 216 CD NE CZ NH1 NH2 REMARK 480 LYS B 23 CG CD CE NZ REMARK 480 GLU B 31 CB CG CD OE1 OE2 REMARK 480 ARG B 69 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS B 111 CD CE NZ REMARK 480 LYS B 115 CD CE NZ REMARK 480 GLU B 150 CB CG CD OE1 OE2 REMARK 480 ARG B 160 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS B 161 CD CE NZ REMARK 480 LYS B 165 CG CD CE NZ REMARK 480 LYS B 184 CB CG CD CE NZ REMARK 480 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 211 CD CE NZ REMARK 480 LYS B 212 CG CD CE NZ REMARK 480 LYS B 215 CG CD CE NZ REMARK 480 GLU B 220 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA A 194 OD2 ASP A 197 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 148 -166.93 -163.22 REMARK 500 SER B 148 -166.89 -163.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 125 OE2 REMARK 620 2 ATP A 601 O3G 87.1 REMARK 620 3 GLU B 125 OE2 82.2 100.6 REMARK 620 4 ATP B 601 O2G 81.8 168.7 79.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6S2J RELATED DB: PDB REMARK 900 RELATED ID: 6S5B RELATED DB: PDB DBREF 6S5C A 1 222 UNP O32080 KTRA_BACSU 1 222 DBREF 6S5C B 1 222 UNP O32080 KTRA_BACSU 1 222 SEQRES 1 A 222 MET GLY ARG ILE LYS ASN LYS GLN PHE ALA VAL ILE GLY SEQRES 2 A 222 LEU GLY ARG PHE GLY GLY SER ILE CYS LYS GLU LEU HIS SEQRES 3 A 222 ARG MET GLY HIS GLU VAL LEU ALA VAL ASP ILE ASN GLU SEQRES 4 A 222 GLU LYS VAL ASN ALA TYR ALA SER TYR ALA THR HIS ALA SEQRES 5 A 222 VAL ILE ALA ASN ALA THR GLU GLU ASN GLU LEU LEU SER SEQRES 6 A 222 LEU GLY ILE ARG ASN PHE GLU TYR VAL ILE VAL ALA ILE SEQRES 7 A 222 GLY ALA ASN ILE GLN ALA SER THR LEU THR THR LEU LEU SEQRES 8 A 222 LEU LYS GLU LEU ASP ILE PRO ASN ILE TRP VAL LYS ALA SEQRES 9 A 222 GLN ASN TYR TYR HIS HIS LYS VAL LEU GLU LYS ILE GLY SEQRES 10 A 222 ALA ASP ARG ILE ILE HIS PRO GLU LYS ASP MET GLY VAL SEQRES 11 A 222 LYS ILE ALA GLN SER LEU SER ASP GLU ASN VAL LEU ASN SEQRES 12 A 222 TYR ILE ASP LEU SER ASP GLU TYR SER ILE VAL GLU LEU SEQRES 13 A 222 LEU ALA THR ARG LYS LEU ASP SER LYS SER ILE ILE ASP SEQRES 14 A 222 LEU ASN VAL ARG ALA LYS TYR GLY CYS THR ILE LEU ALA SEQRES 15 A 222 ILE LYS HIS HIS GLY ASP ILE CYS LEU SER PRO ALA PRO SEQRES 16 A 222 GLU ASP ILE ILE ARG GLU GLN ASP CYS LEU VAL ILE MET SEQRES 17 A 222 GLY HIS LYS LYS ASP ILE LYS ARG PHE GLU ASN GLU GLY SEQRES 18 A 222 MET SEQRES 1 B 222 MET GLY ARG ILE LYS ASN LYS GLN PHE ALA VAL ILE GLY SEQRES 2 B 222 LEU GLY ARG PHE GLY GLY SER ILE CYS LYS GLU LEU HIS SEQRES 3 B 222 ARG MET GLY HIS GLU VAL LEU ALA VAL ASP ILE ASN GLU SEQRES 4 B 222 GLU LYS VAL ASN ALA TYR ALA SER TYR ALA THR HIS ALA SEQRES 5 B 222 VAL ILE ALA ASN ALA THR GLU GLU ASN GLU LEU LEU SER SEQRES 6 B 222 LEU GLY ILE ARG ASN PHE GLU TYR VAL ILE VAL ALA ILE SEQRES 7 B 222 GLY ALA ASN ILE GLN ALA SER THR LEU THR THR LEU LEU SEQRES 8 B 222 LEU LYS GLU LEU ASP ILE PRO ASN ILE TRP VAL LYS ALA SEQRES 9 B 222 GLN ASN TYR TYR HIS HIS LYS VAL LEU GLU LYS ILE GLY SEQRES 10 B 222 ALA ASP ARG ILE ILE HIS PRO GLU LYS ASP MET GLY VAL SEQRES 11 B 222 LYS ILE ALA GLN SER LEU SER ASP GLU ASN VAL LEU ASN SEQRES 12 B 222 TYR ILE ASP LEU SER ASP GLU TYR SER ILE VAL GLU LEU SEQRES 13 B 222 LEU ALA THR ARG LYS LEU ASP SER LYS SER ILE ILE ASP SEQRES 14 B 222 LEU ASN VAL ARG ALA LYS TYR GLY CYS THR ILE LEU ALA SEQRES 15 B 222 ILE LYS HIS HIS GLY ASP ILE CYS LEU SER PRO ALA PRO SEQRES 16 B 222 GLU ASP ILE ILE ARG GLU GLN ASP CYS LEU VAL ILE MET SEQRES 17 B 222 GLY HIS LYS LYS ASP ILE LYS ARG PHE GLU ASN GLU GLY SEQRES 18 B 222 MET HET ATP A 601 31 HET CA A 602 1 HET ATP B 601 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 CA CA 2+ HELIX 1 AA1 GLY A 15 MET A 28 1 14 HELIX 2 AA2 ASN A 38 ALA A 46 1 9 HELIX 3 AA3 SER A 47 ALA A 49 5 3 HELIX 4 AA4 GLU A 59 GLY A 67 1 9 HELIX 5 AA5 ILE A 68 PHE A 71 5 4 HELIX 6 AA6 ASN A 81 LEU A 95 1 15 HELIX 7 AA7 ASN A 106 ILE A 116 1 11 HELIX 8 AA8 HIS A 123 ASP A 138 1 16 HELIX 9 AA9 THR A 159 ASP A 163 5 5 HELIX 10 AB1 LYS A 211 GLY A 221 1 11 HELIX 11 AB2 GLY B 15 MET B 28 1 14 HELIX 12 AB3 ASN B 38 ALA B 46 1 9 HELIX 13 AB4 SER B 47 ALA B 49 5 3 HELIX 14 AB5 GLU B 59 LEU B 66 1 8 HELIX 15 AB6 GLY B 67 PHE B 71 5 5 HELIX 16 AB7 ASN B 81 LEU B 95 1 15 HELIX 17 AB8 ASN B 106 ILE B 116 1 11 HELIX 18 AB9 HIS B 123 ASP B 138 1 16 HELIX 19 AC1 THR B 159 ASP B 163 5 5 HELIX 20 AC2 LYS B 211 GLY B 221 1 11 SHEET 1 AA1 6 HIS A 51 ILE A 54 0 SHEET 2 AA1 6 GLU A 31 ASP A 36 1 N ALA A 34 O HIS A 51 SHEET 3 AA1 6 GLN A 8 ILE A 12 1 N PHE A 9 O GLU A 31 SHEET 4 AA1 6 TYR A 73 VAL A 76 1 O ILE A 75 N ALA A 10 SHEET 5 AA1 6 ASN A 99 LYS A 103 1 O TRP A 101 N VAL A 76 SHEET 6 AA1 6 ARG A 120 ILE A 122 1 O ARG A 120 N VAL A 102 SHEET 1 AA2 5 VAL A 141 ASP A 146 0 SHEET 2 AA2 5 TYR A 151 LEU A 157 -1 O GLU A 155 N LEU A 142 SHEET 3 AA2 5 CYS A 204 HIS A 210 -1 O LEU A 205 N LEU A 156 SHEET 4 AA2 5 THR A 179 HIS A 185 -1 N LEU A 181 O VAL A 206 SHEET 5 AA2 5 ASP A 188 LEU A 191 -1 O ASP A 188 N HIS A 185 SHEET 1 AA3 2 LYS A 165 SER A 166 0 SHEET 2 AA3 2 ILE A 198 ILE A 199 -1 O ILE A 199 N LYS A 165 SHEET 1 AA4 6 HIS B 51 ILE B 54 0 SHEET 2 AA4 6 GLU B 31 ASP B 36 1 N ALA B 34 O HIS B 51 SHEET 3 AA4 6 GLN B 8 ILE B 12 1 N PHE B 9 O GLU B 31 SHEET 4 AA4 6 TYR B 73 VAL B 76 1 O ILE B 75 N ALA B 10 SHEET 5 AA4 6 ASN B 99 LYS B 103 1 O LYS B 103 N VAL B 76 SHEET 6 AA4 6 ARG B 120 ILE B 122 1 O ARG B 120 N VAL B 102 SHEET 1 AA5 5 VAL B 141 ASP B 146 0 SHEET 2 AA5 5 TYR B 151 LEU B 157 -1 O ILE B 153 N ILE B 145 SHEET 3 AA5 5 CYS B 204 HIS B 210 -1 O LEU B 205 N LEU B 156 SHEET 4 AA5 5 THR B 179 HIS B 185 -1 N LEU B 181 O VAL B 206 SHEET 5 AA5 5 ASP B 188 LEU B 191 -1 O ASP B 188 N HIS B 185 SHEET 1 AA6 2 LYS B 165 SER B 166 0 SHEET 2 AA6 2 ILE B 198 ILE B 199 -1 O ILE B 199 N LYS B 165 LINK OE2 GLU A 125 CA CA A 602 1555 1555 2.37 LINK O3G ATP A 601 CA CA A 602 1555 1555 2.45 LINK CA CA A 602 OE2 GLU B 125 1555 1555 2.38 LINK CA CA A 602 O2G ATP B 601 1555 1555 2.53 SITE 1 AC1 17 GLY A 13 ARG A 16 PHE A 17 ASP A 36 SITE 2 AC1 17 ILE A 37 LYS A 41 ALA A 55 ASN A 56 SITE 3 AC1 17 ALA A 57 ILE A 78 GLY A 79 ALA A 80 SITE 4 AC1 17 ALA A 84 LYS A 103 GLU A 125 CA A 602 SITE 5 AC1 17 ARG B 16 SITE 1 AC2 6 ARG A 16 GLU A 125 ATP A 601 ARG B 16 SITE 2 AC2 6 GLU B 125 ATP B 601 SITE 1 AC3 20 ARG A 16 GLU A 125 CA A 602 GLY B 13 SITE 2 AC3 20 LEU B 14 GLY B 15 ARG B 16 PHE B 17 SITE 3 AC3 20 ASP B 36 ILE B 37 LYS B 41 ALA B 55 SITE 4 AC3 20 ASN B 56 ALA B 57 THR B 58 ILE B 78 SITE 5 AC3 20 GLY B 79 ALA B 80 LYS B 103 GLU B 125 CRYST1 122.693 122.693 84.012 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008150 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008150 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011903 0.00000