HEADER SUGAR BINDING PROTEIN 02-JUL-19 6S5R TITLE CFUCOSYLATED SECOND GENERATION PEPTIDE DENDRIMER SBD6 BOUND TO FUCOSE TITLE 2 BINDING LECTIN LECB (PA-IIL) FROM PSEUDOMONAS AERUGINOSA AT 2.08 TITLE 3 ANGSTROM RESOLUTION, INCOMPLETE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUCOSE-BINDING LECTIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: FUCOSE-BINDING LECTIN II (PA-IIL),FUCOSE-BINDING LECTIN PA- COMPND 5 IIL; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: FUCOSE BINDING LECTIN LECB (PA-IIL) FROM PSEUDOMONAS COMPND 8 AERUGINOSA; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: SBD6; COMPND 11 CHAIN: F, H; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: CFUCOSYLATED SECOND GENERATION PEPTIDE DENDRIMER SBD6, COMPND 14 INCOMPLETE FIRST GENERATION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: LECB, C0044_25260, CAZ10_21840, DT376_00595, DY979_15445, SOURCE 5 ECC04_10105, EFK27_13700, EGV95_09240, EGY23_15550, IPC669_23070, SOURCE 6 PA5486_01888, PAERUG_E15_LONDON_28_01_14_00983, PAMH19_1713, SOURCE 7 RW109_RW109_02453; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS LECTIN, FUCOSYLATED, DENDRIMER, SECOND GENERATION, SUGAR BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BAERISWYL,A.STOCKER,J.-L.REYMOND REVDAT 3 24-JAN-24 6S5R 1 REMARK REVDAT 2 29-JUL-20 6S5R 1 REMARK LINK SITE REVDAT 1 21-AUG-19 6S5R 0 JRNL AUTH S.BAERISWYL,S.JAVOR,A.STOCKER,T.DARBRE,J.-L.REYMOND JRNL TITL X-RAY CRYSTAL STRUCTURE OF A SECOND GENERATION PEPTIDE JRNL TITL 2 DENDRIMER IN COMPLEX WITH PSEUDOMONAS AERUGINOSA LECTIN LECB JRNL REF HELV.CHIM.ACTA 2019 JRNL REFN ISSN 0018-019X JRNL DOI 10.1002/HLCA.201900178 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.280 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 87991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 4386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0464 - 6.4437 1.00 2801 151 0.2075 0.2174 REMARK 3 2 6.4437 - 5.1169 1.00 2785 145 0.1842 0.1893 REMARK 3 3 5.1169 - 4.4707 1.00 2800 149 0.1396 0.1571 REMARK 3 4 4.4707 - 4.0623 1.00 2798 151 0.1530 0.1936 REMARK 3 5 4.0623 - 3.7713 1.00 2793 145 0.1735 0.1920 REMARK 3 6 3.7713 - 3.5490 1.00 2816 149 0.1524 0.2275 REMARK 3 7 3.5490 - 3.3713 1.00 2759 141 0.1613 0.2249 REMARK 3 8 3.3713 - 3.2246 1.00 2822 152 0.1833 0.2216 REMARK 3 9 3.2246 - 3.1005 1.00 2810 144 0.2012 0.2212 REMARK 3 10 3.1005 - 2.9935 0.99 2771 146 0.2068 0.2299 REMARK 3 11 2.9935 - 2.9000 1.00 2758 146 0.2161 0.2334 REMARK 3 12 2.9000 - 2.8171 1.00 2804 145 0.2258 0.3306 REMARK 3 13 2.8171 - 2.7429 1.00 2795 152 0.2236 0.2230 REMARK 3 14 2.7429 - 2.6760 1.00 2763 149 0.2164 0.2671 REMARK 3 15 2.6760 - 2.6152 1.00 2831 150 0.2255 0.2550 REMARK 3 16 2.6152 - 2.5595 1.00 2788 146 0.2465 0.2905 REMARK 3 17 2.5595 - 2.5083 1.00 2805 146 0.2564 0.3323 REMARK 3 18 2.5083 - 2.4610 1.00 2752 144 0.2647 0.2926 REMARK 3 19 2.4610 - 2.4171 1.00 2862 141 0.2679 0.3313 REMARK 3 20 2.4171 - 2.3761 1.00 2807 150 0.2833 0.3014 REMARK 3 21 2.3761 - 2.3378 1.00 2762 141 0.2892 0.3330 REMARK 3 22 2.3378 - 2.3018 1.00 2852 148 0.2907 0.2808 REMARK 3 23 2.3018 - 2.2679 1.00 2753 151 0.2795 0.2990 REMARK 3 24 2.2679 - 2.2360 1.00 2822 148 0.2978 0.3163 REMARK 3 25 2.2360 - 2.2058 1.00 2768 149 0.3022 0.3276 REMARK 3 26 2.2058 - 2.1771 1.00 2808 150 0.3112 0.3412 REMARK 3 27 2.1771 - 2.1499 1.00 2806 149 0.3227 0.3207 REMARK 3 28 2.1499 - 2.1240 0.99 2727 139 0.3227 0.3460 REMARK 3 29 2.1240 - 2.0993 0.99 2811 137 0.3285 0.3625 REMARK 3 30 2.0993 - 2.0757 0.94 2576 132 0.3260 0.3462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 3412 REMARK 3 ANGLE : 1.161 4676 REMARK 3 CHIRALITY : 0.060 596 REMARK 3 PLANARITY : 0.007 618 REMARK 3 DIHEDRAL : 3.547 1948 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 13 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.3383 14.6251 19.9444 REMARK 3 T TENSOR REMARK 3 T11: 0.4578 T22: 0.2234 REMARK 3 T33: 0.4984 T12: 0.0445 REMARK 3 T13: -0.1469 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 3.1147 L22: 5.2254 REMARK 3 L33: 2.8753 L12: -2.0528 REMARK 3 L13: 1.9413 L23: 0.5004 REMARK 3 S TENSOR REMARK 3 S11: 0.3469 S12: -0.0676 S13: -0.5879 REMARK 3 S21: -0.3706 S22: -0.1522 S23: 0.2251 REMARK 3 S31: 0.3091 S32: 0.3203 S33: -0.2977 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.3987 15.3749 12.4106 REMARK 3 T TENSOR REMARK 3 T11: 0.9114 T22: 0.4356 REMARK 3 T33: 0.7829 T12: -0.0156 REMARK 3 T13: -0.4022 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 2.3468 L22: 6.7534 REMARK 3 L33: 3.2618 L12: -2.7390 REMARK 3 L13: 2.1424 L23: -4.3545 REMARK 3 S TENSOR REMARK 3 S11: 0.6570 S12: 0.0347 S13: -0.6356 REMARK 3 S21: -1.8869 S22: 0.9384 S23: 1.8389 REMARK 3 S31: 0.7651 S32: -0.9719 S33: -1.4667 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.1233 12.1509 17.0059 REMARK 3 T TENSOR REMARK 3 T11: 0.7426 T22: 0.2978 REMARK 3 T33: 0.6262 T12: 0.0809 REMARK 3 T13: -0.2066 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 3.4040 L22: 2.6255 REMARK 3 L33: 3.3378 L12: -1.5204 REMARK 3 L13: 2.3024 L23: -0.2746 REMARK 3 S TENSOR REMARK 3 S11: 0.4384 S12: 0.1516 S13: -0.8294 REMARK 3 S21: -1.1052 S22: 0.0821 S23: 0.7948 REMARK 3 S31: 0.6874 S32: -0.1383 S33: -0.5794 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 57 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.1022 19.9738 12.2343 REMARK 3 T TENSOR REMARK 3 T11: 1.0360 T22: 0.4238 REMARK 3 T33: 0.7982 T12: 0.0062 REMARK 3 T13: -0.4058 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 2.7103 L22: 7.1345 REMARK 3 L33: 7.1757 L12: -0.4693 REMARK 3 L13: 0.1064 L23: -7.1803 REMARK 3 S TENSOR REMARK 3 S11: 0.1062 S12: 0.3373 S13: -0.5019 REMARK 3 S21: -1.6927 S22: 0.1871 S23: 0.9183 REMARK 3 S31: 0.9761 S32: -0.7357 S33: -0.3741 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 70 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.5704 8.4567 22.1506 REMARK 3 T TENSOR REMARK 3 T11: 0.6456 T22: 0.6101 REMARK 3 T33: 1.6433 T12: -0.0219 REMARK 3 T13: -0.4091 T23: 0.1870 REMARK 3 L TENSOR REMARK 3 L11: 1.7761 L22: 0.8194 REMARK 3 L33: 8.2646 L12: 0.0377 REMARK 3 L13: -2.4646 L23: 1.9473 REMARK 3 S TENSOR REMARK 3 S11: 0.2011 S12: -0.0161 S13: -2.2043 REMARK 3 S21: -0.5728 S22: 0.9059 S23: 1.4628 REMARK 3 S31: 1.5922 S32: -0.1805 S33: -0.6918 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.3491 23.3339 22.6330 REMARK 3 T TENSOR REMARK 3 T11: 0.4266 T22: 0.2869 REMARK 3 T33: 0.3931 T12: 0.0314 REMARK 3 T13: -0.1088 T23: 0.0591 REMARK 3 L TENSOR REMARK 3 L11: 2.7333 L22: 4.4330 REMARK 3 L33: 0.6260 L12: -2.6462 REMARK 3 L13: 0.6175 L23: 0.3387 REMARK 3 S TENSOR REMARK 3 S11: 0.1640 S12: -0.0915 S13: -0.4664 REMARK 3 S21: -0.5153 S22: 0.0715 S23: 0.5549 REMARK 3 S31: 0.1047 S32: -0.2211 S33: -0.2392 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5173 23.2214 27.5466 REMARK 3 T TENSOR REMARK 3 T11: 0.3853 T22: 0.3034 REMARK 3 T33: 0.3928 T12: 0.1034 REMARK 3 T13: 0.0188 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 3.6795 L22: 5.4944 REMARK 3 L33: 4.2252 L12: -1.7956 REMARK 3 L13: -0.6565 L23: -0.7372 REMARK 3 S TENSOR REMARK 3 S11: -0.0719 S12: -0.3410 S13: 0.0786 REMARK 3 S21: -0.1653 S22: 0.2256 S23: -0.5688 REMARK 3 S31: 0.4960 S32: 0.5650 S33: -0.1284 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 48 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6515 21.9220 31.0259 REMARK 3 T TENSOR REMARK 3 T11: 0.3359 T22: 0.3327 REMARK 3 T33: 0.3868 T12: 0.1175 REMARK 3 T13: -0.0412 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 3.5779 L22: 4.6844 REMARK 3 L33: 4.4246 L12: -1.0566 REMARK 3 L13: -0.7585 L23: -0.5594 REMARK 3 S TENSOR REMARK 3 S11: 0.0764 S12: -0.3994 S13: 0.2338 REMARK 3 S21: -0.0478 S22: 0.0910 S23: -0.5794 REMARK 3 S31: 0.2586 S32: 0.2304 S33: -0.1893 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 70 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6176 31.0758 20.9422 REMARK 3 T TENSOR REMARK 3 T11: 0.6830 T22: 0.6679 REMARK 3 T33: 1.0076 T12: 0.1470 REMARK 3 T13: 0.1270 T23: -0.0589 REMARK 3 L TENSOR REMARK 3 L11: 8.1071 L22: 8.0106 REMARK 3 L33: 5.8552 L12: -7.6925 REMARK 3 L13: -6.8846 L23: 6.5993 REMARK 3 S TENSOR REMARK 3 S11: 0.5970 S12: 0.3409 S13: -0.2151 REMARK 3 S21: -1.2268 S22: 0.1063 S23: -1.5935 REMARK 3 S31: 0.5026 S32: 1.4873 S33: -0.3827 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 75 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0428 27.9132 25.1189 REMARK 3 T TENSOR REMARK 3 T11: 0.3872 T22: 0.2707 REMARK 3 T33: 0.3039 T12: 0.0636 REMARK 3 T13: -0.0364 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 2.7586 L22: 3.6795 REMARK 3 L33: 1.1464 L12: -2.6840 REMARK 3 L13: 0.4089 L23: 0.8163 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: -0.1856 S13: -0.0630 REMARK 3 S21: -0.2942 S22: 0.0271 S23: -0.2674 REMARK 3 S31: -0.0751 S32: -0.0411 S33: -0.1064 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4001 5.5732 12.6628 REMARK 3 T TENSOR REMARK 3 T11: 0.5652 T22: 0.2124 REMARK 3 T33: 0.2869 T12: 0.0049 REMARK 3 T13: 0.0816 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 3.4577 L22: 3.2537 REMARK 3 L33: 2.8744 L12: -0.5248 REMARK 3 L13: 1.4331 L23: 1.2544 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: -0.2586 S13: -0.2271 REMARK 3 S21: 0.8458 S22: 0.0567 S23: 0.2599 REMARK 3 S31: 0.0358 S32: -0.1066 S33: 0.0338 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2636 10.8014 18.7004 REMARK 3 T TENSOR REMARK 3 T11: 0.8034 T22: 0.3523 REMARK 3 T33: 0.3659 T12: 0.0616 REMARK 3 T13: 0.1604 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 9.0574 L22: 5.5810 REMARK 3 L33: 2.8327 L12: 4.5054 REMARK 3 L13: 4.0636 L23: 3.1553 REMARK 3 S TENSOR REMARK 3 S11: -0.2022 S12: -0.4740 S13: 0.3512 REMARK 3 S21: 0.8292 S22: 0.0208 S23: 0.3789 REMARK 3 S31: 0.1590 S32: -0.1616 S33: 0.1796 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2149 6.6955 22.3019 REMARK 3 T TENSOR REMARK 3 T11: 1.1640 T22: 0.4243 REMARK 3 T33: 0.3345 T12: 0.0290 REMARK 3 T13: -0.2804 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 3.5788 L22: 9.5576 REMARK 3 L33: 4.6766 L12: 3.9565 REMARK 3 L13: 2.7591 L23: 6.6801 REMARK 3 S TENSOR REMARK 3 S11: -0.1042 S12: -0.5255 S13: -0.9196 REMARK 3 S21: 1.5984 S22: -0.0278 S23: -0.8272 REMARK 3 S31: 1.1193 S32: 1.0497 S33: -0.2564 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0402 6.2370 15.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.7153 T22: 0.2748 REMARK 3 T33: 0.2929 T12: 0.0596 REMARK 3 T13: 0.1733 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 6.9435 L22: 4.1349 REMARK 3 L33: 2.9708 L12: 2.3990 REMARK 3 L13: 3.0313 L23: 1.7753 REMARK 3 S TENSOR REMARK 3 S11: -0.2593 S12: -0.7376 S13: 0.1640 REMARK 3 S21: 0.8016 S22: -0.0365 S23: 0.6787 REMARK 3 S31: 0.1376 S32: -0.3646 S33: 0.2373 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4959 21.1124 18.3426 REMARK 3 T TENSOR REMARK 3 T11: 0.6950 T22: 0.5113 REMARK 3 T33: 0.4417 T12: -0.0061 REMARK 3 T13: 0.0137 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 8.9097 L22: 3.4547 REMARK 3 L33: 5.0593 L12: -5.4098 REMARK 3 L13: -3.5968 L23: 2.9393 REMARK 3 S TENSOR REMARK 3 S11: 0.2697 S12: -1.2581 S13: 1.2106 REMARK 3 S21: 0.3526 S22: -0.6259 S23: -1.1812 REMARK 3 S31: -0.2110 S32: -0.8350 S33: 0.3476 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1323 4.2840 8.8230 REMARK 3 T TENSOR REMARK 3 T11: 0.4192 T22: 0.1816 REMARK 3 T33: 0.2513 T12: 0.0164 REMARK 3 T13: 0.0251 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.7084 L22: 2.5346 REMARK 3 L33: 2.6629 L12: -0.1066 REMARK 3 L13: 0.5397 L23: 0.9305 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: -0.0757 S13: 0.0242 REMARK 3 S21: 0.4155 S22: 0.0076 S23: -0.0721 REMARK 3 S31: 0.0360 S32: -0.0006 S33: -0.0692 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5093 -7.5258 5.1683 REMARK 3 T TENSOR REMARK 3 T11: 0.3972 T22: 0.2235 REMARK 3 T33: 0.6160 T12: 0.0831 REMARK 3 T13: -0.1269 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 1.1561 L22: 4.2167 REMARK 3 L33: 7.3796 L12: 1.5052 REMARK 3 L13: -0.1213 L23: 3.7219 REMARK 3 S TENSOR REMARK 3 S11: 0.0753 S12: 0.0478 S13: 0.0339 REMARK 3 S21: 0.3474 S22: 0.4632 S23: -1.1475 REMARK 3 S31: 0.3817 S32: 0.6060 S33: -0.5095 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6879 -11.7976 17.0252 REMARK 3 T TENSOR REMARK 3 T11: 1.2685 T22: 0.2373 REMARK 3 T33: 0.3620 T12: 0.1469 REMARK 3 T13: -0.1163 T23: 0.1155 REMARK 3 L TENSOR REMARK 3 L11: 6.7102 L22: 3.9052 REMARK 3 L33: 2.4791 L12: 1.3487 REMARK 3 L13: -0.6172 L23: 0.4292 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: -0.5430 S13: -0.2355 REMARK 3 S21: 1.9773 S22: 0.3030 S23: -0.5478 REMARK 3 S31: 0.4346 S32: 0.4193 S33: 0.0819 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2480 -9.4156 14.1248 REMARK 3 T TENSOR REMARK 3 T11: 0.8840 T22: 0.3064 REMARK 3 T33: 0.5401 T12: 0.1697 REMARK 3 T13: -0.3136 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 2.3342 L22: 3.8987 REMARK 3 L33: 2.9901 L12: 0.0436 REMARK 3 L13: -0.8013 L23: 1.2370 REMARK 3 S TENSOR REMARK 3 S11: 0.1340 S12: -0.5679 S13: -0.3344 REMARK 3 S21: 1.6510 S22: 0.2620 S23: -1.3540 REMARK 3 S31: 1.2325 S32: 0.3275 S33: -0.0535 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7347 -7.8918 8.4212 REMARK 3 T TENSOR REMARK 3 T11: 0.5800 T22: 0.2336 REMARK 3 T33: 0.3046 T12: 0.0033 REMARK 3 T13: -0.0378 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.6190 L22: 2.9556 REMARK 3 L33: 0.6667 L12: -0.5271 REMARK 3 L13: 0.0832 L23: 0.5014 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: -0.1213 S13: -0.1316 REMARK 3 S21: 0.6969 S22: 0.1661 S23: -0.1031 REMARK 3 S31: 0.2471 S32: 0.0433 S33: -0.1140 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.6860 27.1327 12.8267 REMARK 3 T TENSOR REMARK 3 T11: 0.8000 T22: 0.3157 REMARK 3 T33: 0.4588 T12: 0.0568 REMARK 3 T13: -0.1530 T23: 0.0346 REMARK 3 L TENSOR REMARK 3 L11: 4.7060 L22: 3.0401 REMARK 3 L33: 0.8295 L12: -1.5832 REMARK 3 L13: 0.2095 L23: 1.2604 REMARK 3 S TENSOR REMARK 3 S11: 0.2406 S12: 0.3803 S13: 0.0332 REMARK 3 S21: -1.3938 S22: -0.0295 S23: 0.9755 REMARK 3 S31: -0.1341 S32: -0.3948 S33: -0.1873 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88116 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.076 REMARK 200 RESOLUTION RANGE LOW (A) : 45.036 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.16 REMARK 200 STARTING MODEL: 1OXC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, 0.1 M SODIUM CITRATE TRIBASIC DIHYDRATE PH 5.6, REMARK 280 2.0 M AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.19433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 210.38867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 157.79150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 262.98583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.59717 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 105.19433 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 210.38867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 262.98583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 157.79150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 52.59717 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 456 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 465 MET C 0 REMARK 465 MET D 0 REMARK 465 DLY F 301 REMARK 465 DTY F 303 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 ARG B 72 CD NE CZ NH1 NH2 REMARK 470 GLU C 35 CG CD OE1 OE2 REMARK 470 ARG C 72 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 25 O HOH A 401 1.84 REMARK 500 O HOH C 431 O HOH D 457 1.87 REMARK 500 NG DPP F 302 C7 ZDC A 305 1.92 REMARK 500 N GLY C 71 O HOH C 401 1.92 REMARK 500 O HOH D 405 O HOH D 444 1.92 REMARK 500 O HOH B 443 O HOH B 458 1.93 REMARK 500 OG1 THR A 36 O HOH A 402 2.01 REMARK 500 O VAL C 65 O HOH C 402 2.02 REMARK 500 O HOH A 450 O HOH A 461 2.03 REMARK 500 O HOH D 435 O HOH D 452 2.05 REMARK 500 O HOH B 411 O HOH B 420 2.10 REMARK 500 OG1 THR B 52 O HOH B 401 2.11 REMARK 500 O HOH H 303 O HOH H 304 2.14 REMARK 500 O HOH C 439 O HOH C 449 2.16 REMARK 500 OD1 ASP B 96 O4 ZDC A 305 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 445 O HOH B 447 8555 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 56.13 38.22 REMARK 500 ASN A 21 71.35 -150.38 REMARK 500 ASN A 46 54.50 -151.45 REMARK 500 GLU A 86 -44.62 -145.96 REMARK 500 SER B 44 140.91 -171.91 REMARK 500 GLU B 86 -33.02 -156.43 REMARK 500 THR C 84 41.18 35.73 REMARK 500 GLU C 86 -45.57 -145.64 REMARK 500 THR D 84 41.48 36.98 REMARK 500 ASN D 85 19.57 59.59 REMARK 500 GLU D 86 -46.48 -138.98 REMARK 500 TYR D 102 29.67 47.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER C 57 10.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 462 DISTANCE = 5.88 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ZDC A 303 REMARK 610 ZDC A 305 REMARK 610 ZDC C 303 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 21 O REMARK 620 2 ASP A 101 OD1 145.4 REMARK 620 3 ASP A 101 OD2 158.7 44.4 REMARK 620 4 ASN A 103 OD1 94.8 65.2 72.7 REMARK 620 5 ASP A 104 OD2 86.2 64.8 109.0 84.3 REMARK 620 6 ZDC A 303 O2 69.5 130.9 120.3 163.5 99.3 REMARK 620 7 ZDC A 303 O3 125.0 66.9 74.8 132.0 74.0 64.1 REMARK 620 8 GLY B 114 O 80.4 125.0 82.4 90.3 165.1 82.2 119.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 95 OE1 REMARK 620 2 GLU A 95 OE2 53.7 REMARK 620 3 ASP A 99 OD1 79.1 79.0 REMARK 620 4 ASP A 101 OD1 76.0 129.1 84.8 REMARK 620 5 ASP A 104 OD1 78.5 72.0 150.2 108.3 REMARK 620 6 ASP A 104 OD2 113.9 122.6 158.4 82.0 51.2 REMARK 620 7 ZDC A 303 O3 151.0 143.9 83.4 79.6 124.6 77.5 REMARK 620 8 ZDC A 303 O4 137.3 84.1 101.2 146.7 82.6 81.2 68.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 114 O REMARK 620 2 ZDC A 305 O2 80.6 REMARK 620 3 ZDC A 305 O3 123.9 59.4 REMARK 620 4 ASN B 21 O 78.0 82.1 127.0 REMARK 620 5 ASP B 101 OD1 127.4 125.2 66.4 142.2 REMARK 620 6 ASP B 101 OD2 86.4 107.8 72.3 160.0 44.6 REMARK 620 7 ASN B 103 OD1 86.7 166.1 133.7 90.0 67.3 76.6 REMARK 620 8 ASP B 104 OD1 160.8 102.1 71.9 83.5 66.7 110.4 88.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ZDC A 305 O3 REMARK 620 2 ZDC A 305 O4 67.6 REMARK 620 3 GLU B 95 OE1 150.2 137.1 REMARK 620 4 GLU B 95 OE2 139.3 85.9 52.2 REMARK 620 5 ASP B 99 OD1 77.7 105.9 78.6 80.8 REMARK 620 6 ASP B 101 OD1 83.0 145.4 76.8 128.6 84.2 REMARK 620 7 ASP B 104 OD1 77.1 75.9 119.8 127.1 151.8 80.2 REMARK 620 8 ASP B 104 OD2 123.8 74.8 84.0 73.7 154.4 110.0 53.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 21 O REMARK 620 2 ASP C 101 OD2 151.8 REMARK 620 3 ASN C 103 OD1 90.7 69.5 REMARK 620 4 ASP C 104 OD1 91.2 107.6 88.7 REMARK 620 5 ZDC C 303 O2 71.2 120.9 156.6 105.9 REMARK 620 6 ZDC C 303 O3 128.0 77.2 139.2 79.3 63.0 REMARK 620 7 GLY D 114 O 79.1 77.7 79.7 164.7 82.3 115.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 95 OE1 REMARK 620 2 GLU C 95 OE2 50.3 REMARK 620 3 ASP C 99 OD1 74.6 84.2 REMARK 620 4 ASP C 101 OD1 120.5 72.2 87.2 REMARK 620 5 ASP C 104 OD1 133.8 113.6 151.6 78.3 REMARK 620 6 ASP C 104 OD2 82.8 83.5 157.2 107.2 51.1 REMARK 620 7 ZDC C 303 O4 92.9 141.2 98.6 146.3 81.4 79.4 REMARK 620 8 ZDC C 303 O3 141.6 154.2 80.5 86.3 74.3 117.3 62.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 114 O REMARK 620 2 ASN D 21 O 76.8 REMARK 620 3 ASP D 101 OD1 126.1 141.5 REMARK 620 4 ASP D 101 OD2 84.5 156.7 45.8 REMARK 620 5 ASN D 103 OD1 83.8 87.8 67.5 76.3 REMARK 620 6 ASP D 104 OD1 159.3 85.9 63.5 109.0 84.3 REMARK 620 7 ZDC H 201 O2 77.0 76.5 134.0 113.0 157.5 110.1 REMARK 620 8 ZDC H 201 O3 121.0 132.1 67.1 69.9 134.5 79.1 66.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 95 OE1 REMARK 620 2 GLU D 95 OE2 54.1 REMARK 620 3 ASP D 99 OD1 69.1 86.5 REMARK 620 4 ASP D 101 OD1 79.9 132.8 86.1 REMARK 620 5 ASP D 104 OD1 122.0 119.6 153.7 73.8 REMARK 620 6 ASP D 104 OD2 93.6 68.0 154.5 109.9 51.6 REMARK 620 7 ZDC H 201 O3 142.5 146.5 80.2 77.0 78.9 121.9 REMARK 620 8 ZDC H 201 O4 135.6 83.1 100.4 144.0 87.0 78.7 69.4 REMARK 620 N 1 2 3 4 5 6 7 DBREF1 6S5R A 0 114 UNP A0A069Q9V4_PSEAI DBREF2 6S5R A A0A069Q9V4 1 115 DBREF1 6S5R B 0 114 UNP A0A069Q9V4_PSEAI DBREF2 6S5R B A0A069Q9V4 1 115 DBREF1 6S5R C 0 114 UNP A0A069Q9V4_PSEAI DBREF2 6S5R C A0A069Q9V4 1 115 DBREF1 6S5R D 0 114 UNP A0A069Q9V4_PSEAI DBREF2 6S5R D A0A069Q9V4 1 115 DBREF 6S5R F 301 303 PDB 6S5R 6S5R 301 303 DBREF 6S5R H 2 4 PDB 6S5R 6S5R 2 4 SEQRES 1 A 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 A 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 A 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 A 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 A 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 A 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 A 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 A 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 A 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 B 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 B 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 B 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 B 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 B 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 B 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 B 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 B 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 B 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 C 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 C 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 C 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 C 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 C 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 C 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 C 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 C 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 C 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 D 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 D 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 D 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 D 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 D 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 D 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 D 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 D 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 D 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 F 3 DLY DPP DTY SEQRES 1 H 3 DLY DPP DTY HET DPP F 302 6 HET DLY H 2 9 HET DPP H 3 6 HET DTY H 4 12 HET CA A 301 1 HET CA A 302 1 HET ZDC A 303 13 HET CA A 304 1 HET ZDC A 305 13 HET CA B 301 1 HET CA C 301 1 HET CA C 302 1 HET ZDC C 303 13 HET CA C 304 1 HET CA D 301 1 HET ZDC H 201 13 HETNAM DPP DIAMINOPROPANOIC ACID HETNAM DLY D-LYSINE HETNAM DTY D-TYROSINE HETNAM CA CALCIUM ION HETNAM ZDC 3,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-OCTONIC ACID FORMUL 5 DPP 2(C3 H8 N2 O2) FORMUL 6 DLY C6 H14 N2 O2 FORMUL 6 DTY C9 H11 N O3 FORMUL 7 CA 8(CA 2+) FORMUL 9 ZDC 4(C8 H14 O6) FORMUL 19 HOH *244(H2 O) SHEET 1 AA1 4 VAL A 5 THR A 7 0 SHEET 2 AA1 4 LYS A 62 VAL A 69 -1 O VAL A 63 N PHE A 6 SHEET 3 AA1 4 ARG A 13 VAL A 32 -1 N ASN A 29 O GLN A 66 SHEET 4 AA1 4 ARG A 72 PRO A 73 0 SHEET 1 AA2 6 THR A 36 ASN A 56 0 SHEET 2 AA2 6 ARG A 13 VAL A 32 -1 N VAL A 30 O ALA A 37 SHEET 3 AA2 6 LYS A 62 VAL A 69 -1 O GLN A 66 N ASN A 29 SHEET 4 AA2 6 ALA A 105 TRP A 111 0 SHEET 5 AA2 6 LEU A 87 GLU A 95 -1 N ALA A 90 O ILE A 109 SHEET 6 AA2 6 ASP A 75 LEU A 83 -1 N VAL A 77 O GLY A 93 SHEET 1 AA3 4 VAL B 5 THR B 7 0 SHEET 2 AA3 4 LYS B 62 VAL B 69 -1 O VAL B 63 N PHE B 6 SHEET 3 AA3 4 ARG B 13 VAL B 32 -1 N LEU B 31 O GLN B 64 SHEET 4 AA3 4 ARG B 72 PRO B 73 0 SHEET 1 AA4 6 GLU B 35 ASN B 56 0 SHEET 2 AA4 6 ARG B 13 VAL B 32 -1 N VAL B 32 O GLU B 35 SHEET 3 AA4 6 LYS B 62 VAL B 69 -1 O GLN B 64 N LEU B 31 SHEET 4 AA4 6 ALA B 105 TRP B 111 0 SHEET 5 AA4 6 LEU B 87 GLU B 95 -1 N VAL B 92 O VAL B 107 SHEET 6 AA4 6 ASP B 75 LEU B 83 -1 N LEU B 83 O LEU B 87 SHEET 1 AA5 4 VAL C 5 THR C 7 0 SHEET 2 AA5 4 LYS C 62 VAL C 69 -1 O VAL C 63 N PHE C 6 SHEET 3 AA5 4 GLN C 26 VAL C 32 -1 N LEU C 31 O GLN C 64 SHEET 4 AA5 4 GLU C 35 GLY C 42 -1 O ALA C 37 N VAL C 30 SHEET 1 AA6 3 VAL C 5 THR C 7 0 SHEET 2 AA6 3 LYS C 62 VAL C 69 -1 O VAL C 63 N PHE C 6 SHEET 3 AA6 3 ARG C 72 PRO C 73 -1 O ARG C 72 N VAL C 69 SHEET 1 AA7 5 VAL C 49 ASN C 56 0 SHEET 2 AA7 5 ARG C 13 ALA C 20 -1 N PHE C 14 O LEU C 55 SHEET 3 AA7 5 ALA C 105 TRP C 111 -1 O VAL C 106 N PHE C 19 SHEET 4 AA7 5 LEU C 87 GLU C 95 -1 N ASN C 88 O TRP C 111 SHEET 5 AA7 5 ASP C 75 LEU C 83 -1 N VAL C 77 O GLY C 93 SHEET 1 AA8 4 VAL D 5 THR D 7 0 SHEET 2 AA8 4 LYS D 62 VAL D 69 -1 O VAL D 63 N PHE D 6 SHEET 3 AA8 4 ARG D 13 VAL D 32 -1 N LEU D 31 O GLN D 64 SHEET 4 AA8 4 ARG D 72 PRO D 73 0 SHEET 1 AA9 6 GLU D 35 ASN D 56 0 SHEET 2 AA9 6 ARG D 13 VAL D 32 -1 N SER D 22 O SER D 44 SHEET 3 AA9 6 LYS D 62 VAL D 69 -1 O GLN D 64 N LEU D 31 SHEET 4 AA9 6 ALA D 105 TRP D 111 0 SHEET 5 AA9 6 LEU D 87 GLU D 95 -1 N ALA D 90 O ILE D 109 SHEET 6 AA9 6 ASP D 75 LEU D 83 -1 N ALA D 79 O LEU D 91 LINK C DLY H 2 N DPP H 3 1555 1555 1.33 LINK C DPP H 3 N DTY H 4 1555 1555 1.33 LINK NG DPP H 3 C7 ZDC H 201 1555 1555 1.34 LINK O ASN A 21 CA CA A 302 1555 1555 2.33 LINK OE1 GLU A 95 CA CA A 301 1555 1555 2.49 LINK OE2 GLU A 95 CA CA A 301 1555 1555 2.38 LINK OD1 ASP A 99 CA CA A 301 1555 1555 2.28 LINK OD1 ASP A 101 CA CA A 301 1555 1555 2.36 LINK OD1 ASP A 101 CA CA A 302 1555 1555 3.12 LINK OD2 ASP A 101 CA CA A 302 1555 1555 2.39 LINK OD1 ASN A 103 CA CA A 302 1555 1555 2.34 LINK OD1 ASP A 104 CA CA A 301 1555 1555 2.63 LINK OD2 ASP A 104 CA CA A 301 1555 1555 2.41 LINK OD2 ASP A 104 CA CA A 302 1555 1555 2.67 LINK O GLY A 114 CA CA A 304 1555 1555 2.51 LINK CA CA A 301 O3 ZDC A 303 1555 1555 2.50 LINK CA CA A 301 O4 ZDC A 303 1555 1555 2.50 LINK CA CA A 302 O2 ZDC A 303 1555 1555 2.66 LINK CA CA A 302 O3 ZDC A 303 1555 1555 2.43 LINK CA CA A 302 O GLY B 114 1555 1555 2.38 LINK CA CA A 304 O2 ZDC A 305 1555 1555 2.43 LINK CA CA A 304 O3 ZDC A 305 1555 1555 2.62 LINK CA CA A 304 O ASN B 21 1555 1555 2.32 LINK CA CA A 304 OD1 ASP B 101 1555 1555 3.10 LINK CA CA A 304 OD2 ASP B 101 1555 1555 2.39 LINK CA CA A 304 OD1 ASN B 103 1555 1555 2.25 LINK CA CA A 304 OD1 ASP B 104 1555 1555 2.46 LINK O3 ZDC A 305 CA CA B 301 1555 1555 2.37 LINK O4 ZDC A 305 CA CA B 301 1555 1555 2.68 LINK OE1 GLU B 95 CA CA B 301 1555 1555 2.54 LINK OE2 GLU B 95 CA CA B 301 1555 1555 2.48 LINK OD1 ASP B 99 CA CA B 301 1555 1555 2.38 LINK OD1 ASP B 101 CA CA B 301 1555 1555 2.39 LINK OD1 ASP B 104 CA CA B 301 1555 1555 2.43 LINK OD2 ASP B 104 CA CA B 301 1555 1555 2.44 LINK O ASN C 21 CA CA C 302 1555 1555 2.33 LINK OE1 GLU C 95 CA CA C 301 1555 1555 2.61 LINK OE2 GLU C 95 CA CA C 301 1555 1555 2.57 LINK OD1 ASP C 99 CA CA C 301 1555 1555 2.33 LINK OD1 ASP C 101 CA CA C 301 1555 1555 2.45 LINK OD2 ASP C 101 CA CA C 302 1555 1555 2.40 LINK OD1 ASN C 103 CA CA C 302 1555 1555 2.40 LINK OD1 ASP C 104 CA CA C 301 1555 1555 2.50 LINK OD2 ASP C 104 CA CA C 301 1555 1555 2.56 LINK OD1 ASP C 104 CA CA C 302 1555 1555 2.33 LINK O GLY C 114 CA CA C 304 1555 1555 2.53 LINK CA CA C 301 O4 ZDC C 303 1555 1555 2.70 LINK CA CA C 301 O3 ZDC C 303 1555 1555 2.59 LINK CA CA C 302 O2 ZDC C 303 1555 1555 2.69 LINK CA CA C 302 O3 ZDC C 303 1555 1555 2.49 LINK CA CA C 302 O GLY D 114 1555 1555 2.55 LINK CA CA C 304 O ASN D 21 1555 1555 2.36 LINK CA CA C 304 OD1 ASP D 101 1555 1555 3.04 LINK CA CA C 304 OD2 ASP D 101 1555 1555 2.37 LINK CA CA C 304 OD1 ASN D 103 1555 1555 2.32 LINK CA CA C 304 OD1 ASP D 104 1555 1555 2.49 LINK CA CA C 304 O2 ZDC H 201 1555 1555 2.45 LINK CA CA C 304 O3 ZDC H 201 1555 1555 2.43 LINK OE1 GLU D 95 CA CA D 301 1555 1555 2.56 LINK OE2 GLU D 95 CA CA D 301 1555 1555 2.25 LINK OD1 ASP D 99 CA CA D 301 1555 1555 2.36 LINK OD1 ASP D 101 CA CA D 301 1555 1555 2.45 LINK OD1 ASP D 104 CA CA D 301 1555 1555 2.46 LINK OD2 ASP D 104 CA CA D 301 1555 1555 2.60 LINK CA CA D 301 O3 ZDC H 201 1555 1555 2.48 LINK CA CA D 301 O4 ZDC H 201 1555 1555 2.54 CISPEP 1 TRP A 111 PRO A 112 0 -3.72 CISPEP 2 TRP B 111 PRO B 112 0 -2.78 CISPEP 3 TRP C 111 PRO C 112 0 -0.08 CISPEP 4 TRP D 111 PRO D 112 0 1.61 CRYST1 91.003 91.003 315.583 90.00 90.00 120.00 P 61 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010989 0.006344 0.000000 0.00000 SCALE2 0.000000 0.012689 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003169 0.00000