HEADER TRANSCRIPTION 02-JUL-19 6S64 TITLE CRYSTAL STRUCTURE OF HTEAD2 IN COMPLEX WITH A TRISUBSTITUTED PYRAZOLE TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TEA DOMAIN FAMILY MEMBER 2,TEAD-2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TEAD2, TEF4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TEAD2, INHIBITOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.STURBAUT,F.ALLEMAND,J.F.GUICHOU REVDAT 3 06-NOV-24 6S64 1 REMARK REVDAT 2 02-FEB-22 6S64 1 JRNL REVDAT 1 22-JUL-20 6S64 0 JRNL AUTH M.STURBAUT,F.BAILLY,M.COEVOET,P.SILEO,M.PUGNIERE, JRNL AUTH 2 M.LIBERELLE,R.MAGNEZ,X.THURU,M.C.CHARTIER-HARLIN,P.MELNYK, JRNL AUTH 3 M.GELIN,F.ALLEMAND,J.F.GUICHOU,P.COTELLE JRNL TITL DISCOVERY OF A CRYPTIC SITE AT THE INTERFACE 2 OF TEAD - JRNL TITL 2 TOWARDS A NEW FAMILY OF YAP/TAZ-TEAD INHIBITORS. JRNL REF EUR.J.MED.CHEM. V. 226 13835 2021 JRNL REFN ISSN 0223-5234 JRNL PMID 34509860 JRNL DOI 10.1016/J.EJMECH.2021.113835 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 24733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1296 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1844 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.4500 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.4990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3327 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.257 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.219 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.233 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.227 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3487 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3317 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4697 ; 1.679 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7605 ; 0.969 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 404 ; 7.548 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;32.529 ;22.865 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;18.117 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;17.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 499 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3978 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 881 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6S64 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26130 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 71.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.02700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8M SODIUM FORMATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.34500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.82750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.34500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.82750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 216 REMARK 465 ALA A 217 REMARK 465 TRP A 218 REMARK 465 GLN A 219 REMARK 465 ALA A 220 REMARK 465 ARG A 221 REMARK 465 PRO A 240 REMARK 465 ASP A 241 REMARK 465 ALA A 242 REMARK 465 VAL A 243 REMARK 465 ASP A 244 REMARK 465 SER A 245 REMARK 465 TYR A 246 REMARK 465 GLN A 247 REMARK 465 HIS A 257 REMARK 465 CYS A 258 REMARK 465 PRO A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 GLY A 262 REMARK 465 ALA A 263 REMARK 465 GLY A 309 REMARK 465 PRO A 310 REMARK 465 SER A 311 REMARK 465 GLY A 312 REMARK 465 GLU A 313 REMARK 465 GLU A 314 REMARK 465 ALA A 315 REMARK 465 GLY A 316 REMARK 465 ALA A 317 REMARK 465 GLY A 318 REMARK 465 GLY A 319 REMARK 465 SER A 320 REMARK 465 ILE A 321 REMARK 465 SER A 322 REMARK 465 SER A 323 REMARK 465 ASP A 447 REMARK 465 VAL A 448 REMARK 465 GLU A 449 REMARK 465 HIS A 450 REMARK 465 HIS A 451 REMARK 465 HIS A 452 REMARK 465 HIS A 453 REMARK 465 HIS A 454 REMARK 465 HIS A 455 REMARK 465 MET B 216 REMARK 465 ALA B 217 REMARK 465 TRP B 218 REMARK 465 CYS B 258 REMARK 465 PRO B 259 REMARK 465 SER B 260 REMARK 465 PRO B 261 REMARK 465 GLY B 262 REMARK 465 GLY B 309 REMARK 465 PRO B 310 REMARK 465 SER B 311 REMARK 465 GLY B 312 REMARK 465 GLU B 313 REMARK 465 GLU B 314 REMARK 465 ALA B 315 REMARK 465 GLY B 316 REMARK 465 ALA B 317 REMARK 465 GLY B 318 REMARK 465 GLY B 319 REMARK 465 SER B 320 REMARK 465 ILE B 321 REMARK 465 SER B 322 REMARK 465 VAL B 448 REMARK 465 GLU B 449 REMARK 465 HIS B 450 REMARK 465 HIS B 451 REMARK 465 HIS B 452 REMARK 465 HIS B 453 REMARK 465 HIS B 454 REMARK 465 HIS B 455 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 323 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 380 O2 PLM B 501 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 265 C - N - CA ANGL. DEV. = 14.3 DEGREES REMARK 500 PRO A 265 C - N - CD ANGL. DEV. = -20.1 DEGREES REMARK 500 ARG B 221 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 265 -172.66 15.41 REMARK 500 VAL A 271 -35.53 -35.67 REMARK 500 LYS A 281 -171.84 -68.78 REMARK 500 ARG A 291 76.74 40.57 REMARK 500 LEU A 374 79.87 -108.45 REMARK 500 LEU B 228 117.80 -162.82 REMARK 500 LYS B 281 -145.05 65.83 REMARK 500 GLU B 366 -143.82 -118.97 REMARK 500 ARG B 369 149.46 -173.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 264 PRO A 265 -145.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KXE B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PLM B 501 and CYS B REMARK 800 380 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6S60 RELATED DB: PDB DBREF 6S64 A 217 447 UNP Q15562 TEAD2_HUMAN 217 447 DBREF 6S64 B 217 447 UNP Q15562 TEAD2_HUMAN 217 447 SEQADV 6S64 MET A 216 UNP Q15562 INITIATING METHIONINE SEQADV 6S64 VAL A 448 UNP Q15562 EXPRESSION TAG SEQADV 6S64 GLU A 449 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 450 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 451 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 452 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 453 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 454 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS A 455 UNP Q15562 EXPRESSION TAG SEQADV 6S64 MET B 216 UNP Q15562 INITIATING METHIONINE SEQADV 6S64 VAL B 448 UNP Q15562 EXPRESSION TAG SEQADV 6S64 GLU B 449 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 450 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 451 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 452 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 453 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 454 UNP Q15562 EXPRESSION TAG SEQADV 6S64 HIS B 455 UNP Q15562 EXPRESSION TAG SEQRES 1 A 240 MET ALA TRP GLN ALA ARG GLY LEU GLY THR ALA ARG LEU SEQRES 2 A 240 GLN LEU VAL GLU PHE SER ALA PHE VAL GLU PRO PRO ASP SEQRES 3 A 240 ALA VAL ASP SER TYR GLN ARG HIS LEU PHE VAL HIS ILE SEQRES 4 A 240 SER GLN HIS CYS PRO SER PRO GLY ALA PRO PRO LEU GLU SEQRES 5 A 240 SER VAL ASP VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU SEQRES 6 A 240 LYS LYS GLY GLY LEU ARG GLU LEU TYR ASP ARG GLY PRO SEQRES 7 A 240 PRO HIS ALA PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU SEQRES 8 A 240 ASN TRP GLY PRO SER GLY GLU GLU ALA GLY ALA GLY GLY SEQRES 9 A 240 SER ILE SER SER GLY GLY PHE TYR GLY VAL SER SER GLN SEQRES 10 A 240 TYR GLU SER LEU GLU HIS MET THR LEU THR CYS SER SER SEQRES 11 A 240 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 12 A 240 GLU THR GLU ARG ALA GLN LEU GLU ASP GLY ARG PHE VAL SEQRES 13 A 240 TYR ARG LEU LEU ARG SER PRO MET CYS GLU TYR LEU VAL SEQRES 14 A 240 ASN PHE LEU HIS LYS LEU ARG GLN LEU PRO GLU ARG TYR SEQRES 15 A 240 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU GLN SEQRES 16 A 240 VAL VAL THR ASN ARG ASP THR GLN GLU LEU LEU LEU CYS SEQRES 17 A 240 THR ALA TYR VAL PHE GLU VAL SER THR SER GLU ARG GLY SEQRES 18 A 240 ALA GLN HIS HIS ILE TYR ARG LEU VAL ARG ASP VAL GLU SEQRES 19 A 240 HIS HIS HIS HIS HIS HIS SEQRES 1 B 240 MET ALA TRP GLN ALA ARG GLY LEU GLY THR ALA ARG LEU SEQRES 2 B 240 GLN LEU VAL GLU PHE SER ALA PHE VAL GLU PRO PRO ASP SEQRES 3 B 240 ALA VAL ASP SER TYR GLN ARG HIS LEU PHE VAL HIS ILE SEQRES 4 B 240 SER GLN HIS CYS PRO SER PRO GLY ALA PRO PRO LEU GLU SEQRES 5 B 240 SER VAL ASP VAL ARG GLN ILE TYR ASP LYS PHE PRO GLU SEQRES 6 B 240 LYS LYS GLY GLY LEU ARG GLU LEU TYR ASP ARG GLY PRO SEQRES 7 B 240 PRO HIS ALA PHE PHE LEU VAL LYS PHE TRP ALA ASP LEU SEQRES 8 B 240 ASN TRP GLY PRO SER GLY GLU GLU ALA GLY ALA GLY GLY SEQRES 9 B 240 SER ILE SER SER GLY GLY PHE TYR GLY VAL SER SER GLN SEQRES 10 B 240 TYR GLU SER LEU GLU HIS MET THR LEU THR CYS SER SER SEQRES 11 B 240 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 12 B 240 GLU THR GLU ARG ALA GLN LEU GLU ASP GLY ARG PHE VAL SEQRES 13 B 240 TYR ARG LEU LEU ARG SER PRO MET CYS GLU TYR LEU VAL SEQRES 14 B 240 ASN PHE LEU HIS LYS LEU ARG GLN LEU PRO GLU ARG TYR SEQRES 15 B 240 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU GLN SEQRES 16 B 240 VAL VAL THR ASN ARG ASP THR GLN GLU LEU LEU LEU CYS SEQRES 17 B 240 THR ALA TYR VAL PHE GLU VAL SER THR SER GLU ARG GLY SEQRES 18 B 240 ALA GLN HIS HIS ILE TYR ARG LEU VAL ARG ASP VAL GLU SEQRES 19 B 240 HIS HIS HIS HIS HIS HIS HET MYR A 501 16 HET PLM B 501 17 HET KXE B 502 28 HETNAM MYR MYRISTIC ACID HETNAM PLM PALMITIC ACID HETNAM KXE 3-[3-(3,4-DICHLOROPHENYL)-4-[(PHENYLMETHYL) HETNAM 2 KXE CARBAMOYL]PYRAZOL-1-YL]PROPANOIC ACID FORMUL 3 MYR C14 H28 O2 FORMUL 4 PLM C16 H32 O2 FORMUL 5 KXE C20 H17 CL2 N3 O3 FORMUL 6 HOH *23(H2 O) HELIX 1 AA1 ARG A 272 PHE A 278 5 7 HELIX 2 AA2 GLY A 284 ASP A 290 1 7 HELIX 3 AA3 PRO A 293 HIS A 295 5 3 HELIX 4 AA4 CYS A 380 GLN A 392 1 13 HELIX 5 AA5 GLU A 395 GLU A 404 1 10 HELIX 6 AA6 PRO B 239 VAL B 243 5 5 HELIX 7 AA7 ARG B 272 PHE B 278 5 7 HELIX 8 AA8 GLY B 284 GLY B 292 1 9 HELIX 9 AA9 PRO B 293 HIS B 295 5 3 HELIX 10 AB1 CYS B 380 GLN B 392 1 13 HELIX 11 AB2 GLU B 395 GLU B 404 1 10 SHEET 1 AA1 5 HIS A 249 SER A 255 0 SHEET 2 AA1 5 GLN A 229 GLU A 238 -1 N VAL A 237 O HIS A 249 SHEET 3 AA1 5 PHE A 326 SER A 335 -1 O PHE A 326 N GLU A 238 SHEET 4 AA1 5 ARG A 369 PRO A 378 -1 O PHE A 370 N SER A 335 SHEET 5 AA1 5 GLN A 364 GLU A 366 -1 N GLU A 366 O ARG A 369 SHEET 1 AA214 SER A 268 ASP A 270 0 SHEET 2 AA214 GLN A 438 VAL A 445 1 O VAL A 445 N VAL A 269 SHEET 3 AA214 PHE A 297 ALA A 304 -1 N LEU A 299 O TYR A 442 SHEET 4 AA214 LEU A 420 VAL A 430 1 O VAL A 427 N PHE A 302 SHEET 5 AA214 PHE A 406 ASN A 414 -1 N VAL A 412 O LEU A 421 SHEET 6 AA214 THR A 340 SER A 349 -1 N CYS A 348 O THR A 407 SHEET 7 AA214 LYS A 352 ARG A 362 -1 O GLU A 361 N LEU A 341 SHEET 8 AA214 LYS B 352 ARG B 362 1 O VAL B 358 N GLU A 356 SHEET 9 AA214 THR B 340 SER B 349 -1 N CYS B 343 O GLU B 359 SHEET 10 AA214 PHE B 406 ASN B 414 -1 O LEU B 409 N LYS B 346 SHEET 11 AA214 LEU B 420 VAL B 430 -1 O TYR B 426 N ILE B 408 SHEET 12 AA214 PHE B 297 ALA B 304 1 N ALA B 304 O GLU B 429 SHEET 13 AA214 GLN B 438 VAL B 445 -1 O TYR B 442 N LEU B 299 SHEET 14 AA214 SER B 268 ASP B 270 1 N VAL B 269 O VAL B 445 SHEET 1 AA3 5 HIS B 249 SER B 255 0 SHEET 2 AA3 5 GLN B 229 GLU B 238 -1 N VAL B 237 O HIS B 249 SHEET 3 AA3 5 PHE B 326 SER B 335 -1 O GLN B 332 N VAL B 231 SHEET 4 AA3 5 ARG B 369 PRO B 378 -1 O LEU B 374 N SER B 331 SHEET 5 AA3 5 GLN B 364 GLU B 366 -1 N GLU B 366 O ARG B 369 LINK SG CYS B 380 C1 PLM B 501 1555 1555 1.83 CISPEP 1 GLY A 292 PRO A 293 0 13.08 CISPEP 2 GLY B 292 PRO B 293 0 5.37 SITE 1 AC1 7 PHE A 233 SER A 345 LYS A 357 PRO A 378 SITE 2 AC1 7 MET A 379 CYS A 380 ILE A 408 SITE 1 AC2 5 LYS A 352 TYR A 397 SER B 349 VAL B 354 SITE 2 AC2 5 TYR B 382 SITE 1 AC3 12 VAL B 252 VAL B 355 LYS B 357 PRO B 378 SITE 2 AC3 12 MET B 379 GLU B 381 TYR B 382 LEU B 383 SITE 3 AC3 12 VAL B 384 LEU B 387 LEU B 403 PHE B 428 CRYST1 122.690 61.655 80.240 90.00 117.36 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008150 0.000000 0.004217 0.00000 SCALE2 0.000000 0.016219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014032 0.00000 TER 1614 ARG A 446 TER 3345 ASP B 447 HETATM 3346 C1 MYR A 501 47.567 41.222 -13.815 1.00 89.47 C HETATM 3347 O1 MYR A 501 47.995 40.326 -14.654 1.00 94.65 O HETATM 3348 O2 MYR A 501 47.942 41.289 -12.664 1.00100.21 O HETATM 3349 C2 MYR A 501 46.583 42.184 -14.400 1.00 80.93 C HETATM 3350 C3 MYR A 501 45.923 43.022 -13.337 1.00 78.29 C HETATM 3351 C4 MYR A 501 44.816 43.915 -13.840 1.00 79.43 C HETATM 3352 C5 MYR A 501 45.055 44.590 -15.152 1.00 77.16 C HETATM 3353 C6 MYR A 501 46.220 45.564 -15.154 1.00 74.81 C HETATM 3354 C7 MYR A 501 45.819 47.029 -15.218 1.00 68.47 C HETATM 3355 C8 MYR A 501 46.355 47.783 -16.387 1.00 67.06 C HETATM 3356 C9 MYR A 501 47.860 47.677 -16.578 1.00 64.17 C HETATM 3357 C10 MYR A 501 48.455 48.909 -17.226 1.00 59.89 C HETATM 3358 C11 MYR A 501 49.353 48.636 -18.369 1.00 61.67 C HETATM 3359 C12 MYR A 501 49.513 49.796 -19.340 1.00 62.86 C HETATM 3360 C13 MYR A 501 49.039 49.460 -20.733 1.00 69.12 C HETATM 3361 C14 MYR A 501 49.530 50.425 -21.774 1.00 69.49 C HETATM 3362 C1 PLM B 501 40.678 28.653 -18.301 1.00 82.49 C HETATM 3363 O2 PLM B 501 41.826 29.049 -18.594 1.00109.16 O HETATM 3364 C2 PLM B 501 40.553 27.556 -17.268 1.00 69.04 C HETATM 3365 C3 PLM B 501 41.136 26.304 -17.881 1.00 72.57 C HETATM 3366 C4 PLM B 501 42.667 26.266 -17.794 1.00 72.59 C HETATM 3367 C5 PLM B 501 43.134 25.298 -16.719 1.00 69.48 C HETATM 3368 C6 PLM B 501 43.916 24.117 -17.244 1.00 65.51 C HETATM 3369 C7 PLM B 501 43.063 23.235 -18.139 1.00 62.87 C HETATM 3370 C8 PLM B 501 43.378 21.738 -17.989 1.00 58.37 C HETATM 3371 C9 PLM B 501 42.841 20.958 -19.162 1.00 54.04 C HETATM 3372 CA PLM B 501 43.526 19.609 -19.268 1.00 61.72 C HETATM 3373 CB PLM B 501 42.897 18.643 -20.277 1.00 63.74 C HETATM 3374 CC PLM B 501 42.525 19.322 -21.589 1.00 67.12 C HETATM 3375 CD PLM B 501 43.343 18.830 -22.755 1.00 66.38 C HETATM 3376 CE PLM B 501 42.807 17.508 -23.281 1.00 72.15 C HETATM 3377 CF PLM B 501 42.979 17.469 -24.788 1.00 71.46 C HETATM 3378 CG PLM B 501 44.439 17.433 -25.122 1.00 78.22 C HETATM 3379 C1 KXE B 502 42.307 32.728 -31.804 0.80 93.99 C HETATM 3380 N2 KXE B 502 46.224 28.341 -31.799 0.80 80.10 N HETATM 3381 C3 KXE B 502 43.392 33.416 -29.630 0.80 90.91 C HETATM 3382 C4 KXE B 502 43.338 33.655 -28.263 0.80 89.62 C HETATM 3383 C5 KXE B 502 42.196 33.343 -27.547 0.80 86.51 C HETATM 3384 C6 KXE B 502 41.110 32.791 -28.201 0.80 87.77 C HETATM 3385 C12 KXE B 502 48.612 30.380 -35.384 0.80 94.74 C HETATM 3386 C13 KXE B 502 44.984 28.716 -31.494 0.80 82.97 C HETATM 3387 C14 KXE B 502 44.348 28.101 -30.301 0.80 83.38 C HETATM 3388 C15 KXE B 502 44.644 26.788 -29.936 0.80 83.23 C HETATM 3389 C16 KXE B 502 44.153 26.259 -28.756 0.80 85.59 C HETATM 3390 C17 KXE B 502 43.370 27.038 -27.921 0.80 83.24 C HETATM 3391 C18 KXE B 502 43.092 28.338 -28.259 0.80 81.30 C HETATM 3392 CL1 KXE B 502 42.314 29.376 -27.117 0.80 89.64 CL HETATM 3393 CL KXE B 502 42.730 26.367 -26.463 0.80101.16 CL HETATM 3394 C19 KXE B 502 43.542 28.864 -29.458 0.80 83.44 C HETATM 3395 N1 KXE B 502 46.577 29.125 -32.846 0.80 81.68 N HETATM 3396 C10 KXE B 502 47.946 29.039 -33.349 0.80 80.01 C HETATM 3397 C11 KXE B 502 48.009 29.109 -34.864 0.80 88.74 C HETATM 3398 O2 KXE B 502 48.470 31.454 -34.819 0.80 90.89 O HETATM 3399 O1 KXE B 502 49.291 30.212 -36.514 0.80 93.94 O HETATM 3400 C9 KXE B 502 45.599 29.964 -33.237 0.80 81.87 C HETATM 3401 C8 KXE B 502 44.531 29.755 -32.390 0.80 84.97 C HETATM 3402 C KXE B 502 43.253 30.565 -32.479 0.80 93.18 C HETATM 3403 O KXE B 502 42.174 30.017 -32.712 0.80 92.58 O HETATM 3404 N KXE B 502 43.381 31.887 -32.315 0.80 97.40 N HETATM 3405 C2 KXE B 502 42.302 32.872 -30.301 0.80 90.99 C HETATM 3406 C7 KXE B 502 41.166 32.547 -29.565 0.80 90.12 C HETATM 3407 O HOH A 601 32.355 54.479 1.681 1.00 60.39 O HETATM 3408 O HOH A 602 44.957 52.942 -29.108 1.00 55.11 O HETATM 3409 O HOH A 603 45.649 42.405 0.576 1.00 75.16 O HETATM 3410 O HOH A 604 64.558 47.371 -18.589 1.00 70.28 O HETATM 3411 O HOH A 605 52.935 40.576 -26.981 1.00 63.57 O HETATM 3412 O HOH A 606 52.945 38.988 -24.205 1.00 67.08 O HETATM 3413 O HOH A 607 57.093 57.301 -39.563 1.00 58.78 O HETATM 3414 O HOH A 608 48.524 39.793 -4.571 1.00 68.39 O HETATM 3415 O HOH A 609 53.721 59.520 -33.053 1.00 50.02 O HETATM 3416 O HOH A 610 58.706 58.516 -13.638 1.00 69.17 O HETATM 3417 O HOH A 611 56.584 57.645 -25.353 1.00 60.40 O HETATM 3418 O HOH B 601 51.497 18.124 -26.171 1.00 45.45 O HETATM 3419 O HOH B 602 60.104 28.231 -22.272 1.00 69.44 O HETATM 3420 O HOH B 603 48.318 8.154 -28.960 1.00 45.02 O HETATM 3421 O HOH B 604 38.384 8.607 -19.326 1.00 51.43 O HETATM 3422 O HOH B 605 44.922 28.528 -12.646 1.00 64.34 O HETATM 3423 O HOH B 606 52.804 24.408 -27.165 1.00 52.47 O HETATM 3424 O HOH B 607 37.017 4.038 -22.939 1.00 72.98 O HETATM 3425 O HOH B 608 35.477 9.057 -17.921 1.00 63.36 O HETATM 3426 O HOH B 609 31.544 24.874 -19.310 1.00 54.58 O HETATM 3427 O HOH B 610 68.699 19.936 -11.307 1.00 58.26 O HETATM 3428 O HOH B 611 45.739 8.592 -11.019 1.00 53.09 O HETATM 3429 O HOH B 612 53.307 8.118 -13.284 1.00 55.48 O CONECT 2773 3362 CONECT 3346 3347 3348 3349 CONECT 3347 3346 CONECT 3348 3346 CONECT 3349 3346 3350 CONECT 3350 3349 3351 CONECT 3351 3350 3352 CONECT 3352 3351 3353 CONECT 3353 3352 3354 CONECT 3354 3353 3355 CONECT 3355 3354 3356 CONECT 3356 3355 3357 CONECT 3357 3356 3358 CONECT 3358 3357 3359 CONECT 3359 3358 3360 CONECT 3360 3359 3361 CONECT 3361 3360 CONECT 3362 2773 3363 3364 CONECT 3363 3362 CONECT 3364 3362 3365 CONECT 3365 3364 3366 CONECT 3366 3365 3367 CONECT 3367 3366 3368 CONECT 3368 3367 3369 CONECT 3369 3368 3370 CONECT 3370 3369 3371 CONECT 3371 3370 3372 CONECT 3372 3371 3373 CONECT 3373 3372 3374 CONECT 3374 3373 3375 CONECT 3375 3374 3376 CONECT 3376 3375 3377 CONECT 3377 3376 3378 CONECT 3378 3377 CONECT 3379 3404 3405 CONECT 3380 3386 3395 CONECT 3381 3382 3405 CONECT 3382 3381 3383 CONECT 3383 3382 3384 CONECT 3384 3383 3406 CONECT 3385 3397 3398 3399 CONECT 3386 3380 3387 3401 CONECT 3387 3386 3388 3394 CONECT 3388 3387 3389 CONECT 3389 3388 3390 CONECT 3390 3389 3391 3393 CONECT 3391 3390 3392 3394 CONECT 3392 3391 CONECT 3393 3390 CONECT 3394 3387 3391 CONECT 3395 3380 3396 3400 CONECT 3396 3395 3397 CONECT 3397 3385 3396 CONECT 3398 3385 CONECT 3399 3385 CONECT 3400 3395 3401 CONECT 3401 3386 3400 3402 CONECT 3402 3401 3403 3404 CONECT 3403 3402 CONECT 3404 3379 3402 CONECT 3405 3379 3381 3406 CONECT 3406 3384 3405 MASTER 416 0 3 11 24 0 7 6 3411 2 62 38 END