HEADER LYASE 15-JUL-19 6S9Z TITLE EXPRESSION TAG MODIFIED N-TERMINUS OF HUMAN CARBONIC ANHYDRASE II TITLE 2 COVALENTLY LINKED TO FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II,CARBONIC ANHYDRASE C,CAC,CARBONIC COMPND 5 ANHYDRASE II,CA-II; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE FIRST 5 AMINO ACIDS (GSPEF) ARE REMNANTS OF AN COMPND 9 EXPRESSION TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 KEYWDS INHIBITOR, COMPLEX, CO2 CONVERSION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.GLOECKNER,A.HEINE,G.KLEBE REVDAT 3 07-FEB-24 6S9Z 1 REMARK REVDAT 2 24-MAY-23 6S9Z 1 COMPND SOURCE REMARK HET REVDAT 2 2 1 HETNAM FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 15-APR-20 6S9Z 0 JRNL AUTH S.GLOCKNER,A.HEINE,G.KLEBE JRNL TITL A PROOF-OF-CONCEPT FRAGMENT SCREENING OF A HIT-VALIDATED JRNL TITL 2 96-COMPOUNDS LIBRARY AGAINST HUMAN CARBONIC ANHYDRASE II. JRNL REF BIOMOLECULES V. 10 2020 JRNL REFN ESSN 2218-273X JRNL PMID 32235320 JRNL DOI 10.3390/BIOM10040518 REMARK 2 REMARK 2 RESOLUTION. 0.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 141257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.120 REMARK 3 R VALUE (WORKING SET) : 0.119 REMARK 3 FREE R VALUE : 0.137 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0300 - 2.9500 0.98 4886 256 0.1432 0.1701 REMARK 3 2 2.9500 - 2.3400 0.98 4804 253 0.1318 0.1671 REMARK 3 3 2.3400 - 2.0500 0.97 4727 248 0.1160 0.1224 REMARK 3 4 2.0500 - 1.8600 0.97 4715 248 0.1129 0.1223 REMARK 3 5 1.8600 - 1.7300 0.97 4703 248 0.1116 0.1191 REMARK 3 6 1.7300 - 1.6200 0.97 4739 249 0.1053 0.1143 REMARK 3 7 1.6200 - 1.5400 0.96 4624 244 0.1048 0.1107 REMARK 3 8 1.5400 - 1.4800 0.96 4650 245 0.1034 0.1286 REMARK 3 9 1.4800 - 1.4200 0.96 4660 245 0.1006 0.1075 REMARK 3 10 1.4200 - 1.3700 0.96 4604 242 0.1018 0.1255 REMARK 3 11 1.3700 - 1.3300 0.96 4618 243 0.1000 0.1093 REMARK 3 12 1.3300 - 1.2900 0.95 4595 242 0.0974 0.1204 REMARK 3 13 1.2900 - 1.2600 0.95 4590 242 0.0999 0.1150 REMARK 3 14 1.2600 - 1.2200 0.95 4612 242 0.1012 0.1184 REMARK 3 15 1.2200 - 1.2000 0.95 4582 242 0.1013 0.1115 REMARK 3 16 1.2000 - 1.1700 0.95 4533 238 0.0963 0.1119 REMARK 3 17 1.1700 - 1.1500 0.95 4515 238 0.0970 0.1084 REMARK 3 18 1.1500 - 1.1300 0.94 4601 242 0.0961 0.1164 REMARK 3 19 1.1300 - 1.1100 0.94 4493 236 0.0972 0.1252 REMARK 3 20 1.1100 - 1.0900 0.94 4441 234 0.1109 0.1251 REMARK 3 21 1.0900 - 1.0700 0.93 4537 239 0.1172 0.1492 REMARK 3 22 1.0700 - 1.0500 0.94 4468 235 0.1240 0.1360 REMARK 3 23 1.0500 - 1.0400 0.93 4461 235 0.1335 0.1561 REMARK 3 24 1.0400 - 1.0200 0.93 4506 237 0.1479 0.1633 REMARK 3 25 1.0200 - 1.0100 0.93 4436 233 0.1472 0.1677 REMARK 3 26 1.0100 - 1.0000 0.92 4480 236 0.1565 0.1746 REMARK 3 27 1.0000 - 0.9800 0.92 4339 229 0.1647 0.1711 REMARK 3 28 0.9800 - 0.9700 0.82 3964 208 0.1787 0.1926 REMARK 3 29 0.9700 - 0.9600 0.71 3398 179 0.1875 0.2276 REMARK 3 30 0.9600 - 0.9500 0.61 2915 153 0.2073 0.2116 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.063 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.072 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2777 REMARK 3 ANGLE : 0.974 3847 REMARK 3 CHIRALITY : 0.088 386 REMARK 3 PLANARITY : 0.007 550 REMARK 3 DIHEDRAL : 14.853 1058 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141261 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.950 REMARK 200 RESOLUTION RANGE LOW (A) : 41.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 3.830 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 10.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.75 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43200 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KS3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE 2.7 M, PH 7.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.64000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 4 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 39 NZ REMARK 470 LYS A 45 CD CE NZ REMARK 470 LYS A 80 CE NZ REMARK 470 LYS A 133 CE NZ REMARK 470 LYS A 149 NZ REMARK 470 LYS A 170 NZ REMARK 470 GLU A 239 CD OE1 OE2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 3 30.80 -94.47 REMARK 500 ASN A 11 14.00 -141.41 REMARK 500 ARG A 27 55.81 -140.26 REMARK 500 ARG A 27 42.74 -143.90 REMARK 500 LEU A 57 -52.17 -127.47 REMARK 500 LEU A 57 -62.42 -127.47 REMARK 500 HIS A 64 -31.90 -130.02 REMARK 500 ALA A 65 -166.65 -162.68 REMARK 500 ASP A 75 98.66 -65.31 REMARK 500 LYS A 76 -13.01 -141.53 REMARK 500 GLU A 106 -60.69 -93.32 REMARK 500 LYS A 111 -2.45 73.50 REMARK 500 PHE A 176 41.30 -141.95 REMARK 500 ASN A 244 47.42 -94.57 REMARK 500 ASN A 244 51.35 -93.96 REMARK 500 LYS A 252 -137.30 56.18 REMARK 500 LYS A 252 -142.94 56.18 REMARK 500 ASN A 253 40.18 -88.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 638 DISTANCE = 6.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 53 OE1 REMARK 620 2 ASP A 162 O 111.2 REMARK 620 3 ASP A 165 OD1 112.1 2.4 REMARK 620 4 HOH A 550 O 91.4 79.7 77.6 REMARK 620 5 HOH A 558 O 104.3 7.0 8.5 80.5 REMARK 620 6 HOH A 578 O 85.0 163.7 162.5 99.2 170.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 83 O REMARK 620 2 PG4 A 308 O4 77.5 REMARK 620 3 PG4 A 308 O5 90.5 68.5 REMARK 620 4 PG4 A 308 O2 98.5 129.9 160.8 REMARK 620 5 PG4 A 308 O3 99.8 66.0 129.7 65.6 REMARK 620 6 PG4 A 308 O1 87.2 158.1 96.3 67.4 133.0 REMARK 620 7 HOH A 520 O 159.7 106.2 73.0 94.2 100.0 83.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 103.2 REMARK 620 3 HIS A 119 ND1 114.2 97.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 301 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 135 O REMARK 620 2 CYS A 206 SG 82.7 REMARK 620 3 HOH A 516 O 56.7 119.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BE7 A 306 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 137 O REMARK 620 2 BE7 A 306 C5 94.5 REMARK 620 3 GLU A 205 O 90.2 82.4 REMARK 620 4 CYS A 206 SG 85.7 177.9 95.5 REMARK 620 5 HOH A 516 O 137.3 95.1 132.3 86.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BE7 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HOH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide FOR A 307 and GLY A REMARK 800 -4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues FOR A 307 and L2K A REMARK 800 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M78 RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH DIFFERENT FRAGMENT. REMARK 900 RELATED ID: 6RM1 RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH DIFFERENT FRAGMENT. REMARK 900 RELATED ID: 6RMP RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH DIFFERENT FRAGMENT. DBREF 6S9Z A 1 261 UNP P00918 CAH2_HUMAN 1 260 SEQADV 6S9Z GLY A -4 UNP P00918 EXPRESSION TAG SEQADV 6S9Z SER A -3 UNP P00918 EXPRESSION TAG SEQADV 6S9Z PRO A -2 UNP P00918 EXPRESSION TAG SEQADV 6S9Z GLU A -1 UNP P00918 EXPRESSION TAG SEQADV 6S9Z PHE A 0 UNP P00918 EXPRESSION TAG SEQRES 1 A 265 GLY SER PRO GLU PHE MET SER HIS HIS TRP GLY TYR GLY SEQRES 2 A 265 LYS HIS ASN GLY PRO GLU HIS TRP HIS LYS ASP PHE PRO SEQRES 3 A 265 ILE ALA LYS GLY GLU ARG GLN SER PRO VAL ASP ILE ASP SEQRES 4 A 265 THR HIS THR ALA LYS TYR ASP PRO SER LEU LYS PRO LEU SEQRES 5 A 265 SER VAL SER TYR ASP GLN ALA THR SER LEU ARG ILE LEU SEQRES 6 A 265 ASN ASN GLY HIS ALA PHE ASN VAL GLU PHE ASP ASP SER SEQRES 7 A 265 GLN ASP LYS ALA VAL LEU LYS GLY GLY PRO LEU ASP GLY SEQRES 8 A 265 THR TYR ARG LEU ILE GLN PHE HIS PHE HIS TRP GLY SER SEQRES 9 A 265 LEU ASP GLY GLN GLY SER GLU HIS THR VAL ASP LYS LYS SEQRES 10 A 265 LYS TYR ALA ALA GLU LEU HIS LEU VAL HIS TRP ASN THR SEQRES 11 A 265 LYS TYR GLY ASP PHE GLY LYS ALA VAL GLN GLN PRO ASP SEQRES 12 A 265 GLY LEU ALA VAL LEU GLY ILE PHE LEU LYS VAL GLY SER SEQRES 13 A 265 ALA LYS PRO GLY LEU GLN LYS VAL VAL ASP VAL LEU ASP SEQRES 14 A 265 SER ILE LYS THR LYS GLY LYS SER ALA ASP PHE THR ASN SEQRES 15 A 265 PHE ASP PRO ARG GLY LEU LEU PRO GLU SER LEU ASP TYR SEQRES 16 A 265 TRP THR TYR PRO GLY SER LEU THR THR PRO PRO LEU LEU SEQRES 17 A 265 GLU CYS VAL THR TRP ILE VAL LEU LYS GLU PRO ILE SER SEQRES 18 A 265 VAL SER SER GLU GLN VAL LEU LYS PHE ARG LYS LEU ASN SEQRES 19 A 265 PHE ASN GLY GLU GLY GLU PRO GLU GLU LEU MET VAL ASP SEQRES 20 A 265 ASN TRP ARG PRO ALA GLN PRO LEU LYS ASN ARG GLN ILE SEQRES 21 A 265 LYS ALA SER PHE LYS HET HG A 301 1 HET ZN A 302 1 HET NA A 303 1 HET NA A 304 1 HET DMS A 305 4 HET BE7 A 306 10 HET VKL A 307 20 HET PG4 A 308 13 HETNAM HG MERCURY (II) ION HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM BE7 (4-CARBOXYPHENYL)(CHLORO)MERCURY HETNAM VKL 3-[3,4-BIS(FLUORANYL)PHENYL]-5-METHYL-1$L^{4},4, HETNAM 2 VKL 5$L^{4},7-TETRAZABICYCLO[4.3.0]NONA-1(6),2,4-TRIENE HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN BE7 P-CHLOROMERCURIBENZOIC ACID FORMUL 2 HG HG 2+ FORMUL 3 ZN ZN 2+ FORMUL 4 NA 2(NA 1+) FORMUL 6 DMS C2 H6 O S FORMUL 7 BE7 C7 H5 CL HG O2 FORMUL 8 VKL C12 H12 F2 N4 2+ FORMUL 9 PG4 C8 H18 O5 FORMUL 10 HOH *238(H2 O) HELIX 1 AA1 SER A -3 SER A 2 1 6 HELIX 2 AA2 HIS A 15 ASP A 19 5 5 HELIX 3 AA3 PHE A 20 GLY A 25 5 6 HELIX 4 AA4 LYS A 127 GLY A 129 5 3 HELIX 5 AA5 ASP A 130 VAL A 135 1 6 HELIX 6 AA6 LYS A 154 GLY A 156 5 3 HELIX 7 AA7 LEU A 157 LEU A 164 1 8 HELIX 8 AA8 ASP A 165 LYS A 168 5 4 HELIX 9 AA9 ASP A 180 LEU A 185 5 6 HELIX 10 AB1 SER A 219 ARG A 227 1 9 SHEET 1 AA1 2 ASP A 32 ILE A 33 0 SHEET 2 AA1 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 AA210 LYS A 39 TYR A 40 0 SHEET 2 AA210 LYS A 257 ALA A 258 1 O ALA A 258 N LYS A 39 SHEET 3 AA210 TYR A 191 GLY A 196 -1 N THR A 193 O LYS A 257 SHEET 4 AA210 VAL A 207 LEU A 212 -1 O VAL A 207 N GLY A 196 SHEET 5 AA210 LEU A 141 VAL A 150 1 N GLY A 145 O LEU A 212 SHEET 6 AA210 ALA A 116 ASN A 124 -1 N LEU A 118 O ILE A 146 SHEET 7 AA210 TYR A 88 TRP A 97 -1 N HIS A 94 O HIS A 119 SHEET 8 AA210 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 9 AA210 SER A 56 ASN A 61 -1 N ARG A 58 O GLU A 69 SHEET 10 AA210 SER A 173 ASP A 175 -1 O ALA A 174 N ILE A 59 SHEET 1 AA3 6 LEU A 47 SER A 50 0 SHEET 2 AA3 6 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 AA3 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA3 6 ALA A 116 ASN A 124 -1 O HIS A 119 N HIS A 94 SHEET 5 AA3 6 LEU A 141 VAL A 150 -1 O ILE A 146 N LEU A 118 SHEET 6 AA3 6 ILE A 216 VAL A 218 1 O ILE A 216 N PHE A 147 LINK N GLY A -4 C VKL A 307 1555 1555 1.43 LINK OE1 GLN A 53 NA NA A 304 1555 1555 2.30 LINK O PRO A 83 NA NA A 303 1555 1555 2.37 LINK NE2 HIS A 94 ZN ZN A 302 1555 1555 2.02 LINK NE2 HIS A 96 ZN ZN A 302 1555 1555 2.07 LINK ND1 HIS A 119 ZN ZN A 302 1555 1555 2.04 LINK O VAL A 135 HG B HG A 301 1555 1555 3.18 LINK O AGLN A 137 HG ABE7 A 306 1555 1555 2.88 LINK O ASP A 162 NA NA A 304 1555 2545 2.30 LINK OD1 ASP A 165 NA NA A 304 1555 2545 2.44 LINK O GLU A 205 HG ABE7 A 306 1555 1555 3.16 LINK SG BCYS A 206 HG B HG A 301 1555 1555 2.54 LINK SG ACYS A 206 HG ABE7 A 306 1555 1555 2.38 LINK HG B HG A 301 O HOH A 516 1555 1555 2.61 LINK NA NA A 303 O4 PG4 A 308 1555 1555 2.75 LINK NA NA A 303 O5 PG4 A 308 1555 1555 2.40 LINK NA NA A 303 O2 PG4 A 308 1555 1555 2.48 LINK NA NA A 303 O3 PG4 A 308 1555 1555 2.40 LINK NA NA A 303 O1 PG4 A 308 1555 1555 2.61 LINK NA NA A 303 O HOH A 520 1555 1555 2.30 LINK NA NA A 304 O HOH A 550 1555 1555 2.56 LINK NA NA A 304 O HOH A 558 1555 2555 2.38 LINK NA NA A 304 O HOH A 578 1555 2555 2.50 LINK HG ABE7 A 306 O HOH A 516 1555 1555 2.96 CISPEP 1 SER A 29 PRO A 30 0 -1.31 CISPEP 2 PRO A 201 PRO A 202 0 12.19 SITE 1 AC1 5 VAL A 135 GLN A 137 CYS A 206 BE7 A 306 SITE 2 AC1 5 HOH A 517 SITE 1 AC2 3 HIS A 94 HIS A 96 HIS A 119 SITE 1 AC3 3 PRO A 83 HOH A 401 HOH A 521 SITE 1 AC4 2 GLN A 53 HOH A 551 SITE 1 AC5 3 ASP A 243 TRP A 245 PRO A 247 SITE 1 AC6 8 GLN A 136 GLN A 137 PRO A 138 GLU A 205 SITE 2 AC6 8 CYS A 206 HG A 301 HOH A 517 HOH A 538 SITE 1 AC7 5 LEU A 44 PRO A 83 ASP A 85 NA A 303 SITE 2 AC7 5 HOH A 521 SITE 1 AC8 3 SER A -3 MET A 1 HOH A 425 SITE 1 AC9 6 GLY A -4 PHE A 0 MET A 1 GLN A 158 SITE 2 AC9 6 LYS A 159 ASP A 162 CRYST1 42.354 41.280 72.421 90.00 104.65 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023611 0.000000 0.006173 0.00000 SCALE2 0.000000 0.024225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014272 0.00000