HEADER HYDROLASE 17-JUL-19 6SAV TITLE STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF THREE NOVEL FUNGAL TITLE 2 AMYLASES WITH ENHANCED STABILITY AND PH TOLERANCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ALPHA-AMYLASE; COMPND 8 CHAIN: B; COMPND 9 EC: 3.2.1.1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOMUCOR PUSILLUS; SOURCE 3 ORGANISM_TAXID: 4840; SOURCE 4 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 5062; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: RHIZOMUCOR PUSILLUS; SOURCE 8 ORGANISM_TAXID: 4840; SOURCE 9 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS BIOTECHNOLOGY, FUNGAL AMYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ROTH,O.V.MOROZ,J.P.TURKENBURG,E.BLAGOVA,J.WATERMAN,A.ARIZA,L.MING, AUTHOR 2 S.TIANQI,C.ANDERSEN,G.J.DAVIES,K.S.WILSON REVDAT 5 20-NOV-24 6SAV 1 REMARK REVDAT 4 24-JAN-24 6SAV 1 REMARK HETSYN REVDAT 3 29-JUL-20 6SAV 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 30-OCT-19 6SAV 1 JRNL REVDAT 1 23-OCT-19 6SAV 0 JRNL AUTH C.ROTH,O.V.MOROZ,J.P.TURKENBURG,E.BLAGOVA,J.WATERMAN, JRNL AUTH 2 A.ARIZA,L.MING,S.TIANQI,C.ANDERSEN,G.J.DAVIES,K.S.WILSON JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THREE NOVEL JRNL TITL 2 FUNGAL AMYLASES WITH ENHANCED STABILITY AND PH TOLERANCE. JRNL REF INT J MOL SCI V. 20 2019 JRNL REFN ESSN 1422-0067 JRNL PMID 31623309 JRNL DOI 10.3390/IJMS20194902 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 138848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7328 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 374 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6811 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 943 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : 0.40000 REMARK 3 B12 (A**2) : 0.28000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : -0.07000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.036 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.920 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7582 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6430 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10390 ; 2.013 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15044 ; 1.658 ; 1.587 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 985 ; 6.761 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;37.493 ;21.754 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 997 ;12.675 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;20.076 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 983 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8930 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1656 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6SAV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 146177 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 43.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.24900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2TAA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL, 0.1 M NA-ACETATE PH 4.6, REMARK 280 30 %MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER B 90 N CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 930 O HOH B 980 1.92 REMARK 500 O1 GOL A 506 O HOH A 601 1.94 REMARK 500 O HOH B 760 O HOH B 1007 2.03 REMARK 500 OE2 GLU B 305 O HOH B 601 2.04 REMARK 500 OD1 ASP A 154 O HOH A 602 2.09 REMARK 500 OD1 ASP B 197 O HOH B 602 2.13 REMARK 500 OE1 GLU B 305 O HOH B 601 2.15 REMARK 500 O HOH A 839 O HOH A 1005 2.16 REMARK 500 O2 GOL B 507 O HOH B 603 2.17 REMARK 500 NH2 ARG B 21 OG SER B 25 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 294 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 352 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 352 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP A 429 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 TYR B 181 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 254 CG - CD - NE ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG B 352 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 75 56.49 -117.12 REMARK 500 THR A 77 -77.34 -112.94 REMARK 500 THR A 118 -148.75 -79.13 REMARK 500 SER A 119 -26.18 -161.43 REMARK 500 ASN A 120 -115.55 -122.85 REMARK 500 ASN A 120 -111.80 -122.85 REMARK 500 ALA A 153 17.98 55.39 REMARK 500 GLU A 155 -14.54 -141.01 REMARK 500 GLU A 155 -28.34 -143.67 REMARK 500 VAL A 246 -61.09 -96.17 REMARK 500 VAL A 246 -72.54 -96.17 REMARK 500 THR B 77 -76.43 -115.38 REMARK 500 ASP B 154 4.29 58.54 REMARK 500 ASP B 154 26.64 35.52 REMARK 500 VAL B 246 -65.56 -103.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 412 ILE A 413 -146.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 113 OD1 REMARK 620 2 GLU A 148 O 152.1 REMARK 620 3 ASP A 158 OD1 77.8 117.9 REMARK 620 4 ASP A 158 OD2 124.7 79.6 50.2 REMARK 620 5 HIS A 193 O 73.7 80.0 137.6 158.3 REMARK 620 6 HOH A 774 O 113.7 70.6 139.4 98.4 81.6 REMARK 620 7 HOH A 776 O 72.9 130.7 78.0 78.5 121.0 69.8 REMARK 620 8 HOH A 799 O 91.3 75.7 68.0 86.0 81.9 144.4 144.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 113 OD1 REMARK 620 2 GLU B 148 O 153.1 REMARK 620 3 ASP B 158 OD1 76.6 118.4 REMARK 620 4 ASP B 158 OD2 124.8 78.2 51.0 REMARK 620 5 HIS B 193 O 75.1 79.7 138.1 156.6 REMARK 620 6 HOH B 768 O 91.1 76.1 68.3 85.3 82.0 REMARK 620 7 HOH B 778 O 72.9 130.0 77.2 79.0 121.8 144.6 REMARK 620 8 HOH B 791 O 114.3 70.1 139.4 98.5 81.1 144.3 70.1 REMARK 620 N 1 2 3 4 5 6 7 DBREF 6SAV A 1 438 UNP M9TI89 M9TI89_RHIPU 34 471 DBREF 6SAV B 1 438 UNP M9TI89 M9TI89_RHIPU 34 471 SEQADV 6SAV ALA A 94 UNP M9TI89 THR 127 CONFLICT SEQADV 6SAV ASP A 103 UNP M9TI89 GLY 136 CONFLICT SEQADV 6SAV SER A 231 UNP M9TI89 PRO 264 CONFLICT SEQADV 6SAV THR A 333 UNP M9TI89 ALA 366 CONFLICT SEQADV 6SAV ALA A 358 UNP M9TI89 THR 391 CONFLICT SEQADV 6SAV ALA B 94 UNP M9TI89 THR 127 CONFLICT SEQADV 6SAV ASP B 103 UNP M9TI89 GLY 136 CONFLICT SEQADV 6SAV IAS B 120 UNP M9TI89 ASN 153 CONFLICT SEQADV 6SAV SER B 231 UNP M9TI89 PRO 264 CONFLICT SEQADV 6SAV THR B 333 UNP M9TI89 ALA 366 CONFLICT SEQADV 6SAV ALA B 358 UNP M9TI89 THR 391 CONFLICT SEQRES 1 A 438 ALA THR SER ASP ASP TRP LYS SER LYS ALA ILE TYR GLN SEQRES 2 A 438 LEU LEU THR ASP ARG PHE GLY ARG ALA ASP ASP SER THR SEQRES 3 A 438 SER ASN CYS SER ASN LEU SER ASN TYR CYS GLY GLY THR SEQRES 4 A 438 TYR GLU GLY ILE THR LYS HIS LEU ASP TYR ILE SER GLY SEQRES 5 A 438 MET GLY PHE ASP ALA ILE TRP ILE SER PRO ILE PRO LYS SEQRES 6 A 438 ASN SER ASP GLY GLY TYR HIS GLY TYR TRP ALA THR ASP SEQRES 7 A 438 PHE TYR GLN LEU ASN SER ASN PHE GLY ASP GLU SER GLN SEQRES 8 A 438 LEU LYS ALA LEU ILE GLN ALA ALA HIS GLU ARG ASP MET SEQRES 9 A 438 TYR VAL MET LEU ASP VAL VAL ALA ASN HIS ALA GLY PRO SEQRES 10 A 438 THR SER ASN GLY TYR SER GLY TYR THR PHE GLY ASP ALA SEQRES 11 A 438 SER LEU TYR HIS PRO LYS CYS THR ILE ASP TYR ASN ASP SEQRES 12 A 438 GLN THR SER ILE GLU GLN CYS TRP VAL ALA ASP GLU LEU SEQRES 13 A 438 PRO ASP ILE ASP THR GLU ASN SER ASP ASN VAL ALA ILE SEQRES 14 A 438 LEU ASN ASP ILE VAL SER GLY TRP VAL GLY ASN TYR SER SEQRES 15 A 438 PHE ASP GLY ILE ARG ILE ASP THR VAL LYS HIS ILE ARG SEQRES 16 A 438 LYS ASP PHE TRP THR GLY TYR ALA GLU ALA ALA GLY VAL SEQRES 17 A 438 PHE ALA THR GLY GLU VAL PHE ASN GLY ASP PRO ALA TYR SEQRES 18 A 438 VAL GLY PRO TYR GLN LYS TYR LEU PRO SER LEU ILE ASN SEQRES 19 A 438 TYR PRO MET TYR TYR ALA LEU ASN ASP VAL PHE VAL SER SEQRES 20 A 438 LYS SER LYS GLY PHE SER ARG ILE SER GLU MET LEU GLY SEQRES 21 A 438 SER ASN ARG ASN ALA PHE GLU ASP THR SER VAL LEU THR SEQRES 22 A 438 THR PHE VAL ASP ASN HIS ASP ASN PRO ARG PHE LEU ASN SEQRES 23 A 438 SER GLN SER ASP LYS ALA LEU PHE LYS ASN ALA LEU THR SEQRES 24 A 438 TYR VAL LEU LEU GLY GLU GLY ILE PRO ILE VAL TYR TYR SEQRES 25 A 438 GLY SER GLU GLN GLY PHE SER GLY GLY ALA ASP PRO ALA SEQRES 26 A 438 ASN ARG GLU VAL LEU TRP THR THR ASN TYR ASP THR SER SEQRES 27 A 438 SER ASP LEU TYR GLN PHE ILE LYS THR VAL ASN SER VAL SEQRES 28 A 438 ARG MET LYS SER ASN LYS ALA VAL TYR MET ASP ILE TYR SEQRES 29 A 438 VAL GLY ASP ASN ALA TYR ALA PHE LYS HIS GLY ASP ALA SEQRES 30 A 438 LEU VAL VAL LEU ASN ASN TYR GLY SER GLY SER THR ASN SEQRES 31 A 438 GLN VAL SER PHE SER VAL SER GLY LYS PHE ASP SER GLY SEQRES 32 A 438 ALA SER LEU MET ASP ILE VAL SER ASN ILE THR THR THR SEQRES 33 A 438 VAL SER SER ASP GLY THR VAL THR PHE ASN LEU LYS ASP SEQRES 34 A 438 GLY LEU PRO ALA ILE PHE THR SER ALA SEQRES 1 B 438 ALA THR SER ASP ASP TRP LYS SER LYS ALA ILE TYR GLN SEQRES 2 B 438 LEU LEU THR ASP ARG PHE GLY ARG ALA ASP ASP SER THR SEQRES 3 B 438 SER ASN CYS SER ASN LEU SER ASN TYR CYS GLY GLY THR SEQRES 4 B 438 TYR GLU GLY ILE THR LYS HIS LEU ASP TYR ILE SER GLY SEQRES 5 B 438 MET GLY PHE ASP ALA ILE TRP ILE SER PRO ILE PRO LYS SEQRES 6 B 438 ASN SER ASP GLY GLY TYR HIS GLY TYR TRP ALA THR ASP SEQRES 7 B 438 PHE TYR GLN LEU ASN SER ASN PHE GLY ASP GLU SER GLN SEQRES 8 B 438 LEU LYS ALA LEU ILE GLN ALA ALA HIS GLU ARG ASP MET SEQRES 9 B 438 TYR VAL MET LEU ASP VAL VAL ALA ASN HIS ALA GLY PRO SEQRES 10 B 438 THR SER IAS GLY TYR SER GLY TYR THR PHE GLY ASP ALA SEQRES 11 B 438 SER LEU TYR HIS PRO LYS CYS THR ILE ASP TYR ASN ASP SEQRES 12 B 438 GLN THR SER ILE GLU GLN CYS TRP VAL ALA ASP GLU LEU SEQRES 13 B 438 PRO ASP ILE ASP THR GLU ASN SER ASP ASN VAL ALA ILE SEQRES 14 B 438 LEU ASN ASP ILE VAL SER GLY TRP VAL GLY ASN TYR SER SEQRES 15 B 438 PHE ASP GLY ILE ARG ILE ASP THR VAL LYS HIS ILE ARG SEQRES 16 B 438 LYS ASP PHE TRP THR GLY TYR ALA GLU ALA ALA GLY VAL SEQRES 17 B 438 PHE ALA THR GLY GLU VAL PHE ASN GLY ASP PRO ALA TYR SEQRES 18 B 438 VAL GLY PRO TYR GLN LYS TYR LEU PRO SER LEU ILE ASN SEQRES 19 B 438 TYR PRO MET TYR TYR ALA LEU ASN ASP VAL PHE VAL SER SEQRES 20 B 438 LYS SER LYS GLY PHE SER ARG ILE SER GLU MET LEU GLY SEQRES 21 B 438 SER ASN ARG ASN ALA PHE GLU ASP THR SER VAL LEU THR SEQRES 22 B 438 THR PHE VAL ASP ASN HIS ASP ASN PRO ARG PHE LEU ASN SEQRES 23 B 438 SER GLN SER ASP LYS ALA LEU PHE LYS ASN ALA LEU THR SEQRES 24 B 438 TYR VAL LEU LEU GLY GLU GLY ILE PRO ILE VAL TYR TYR SEQRES 25 B 438 GLY SER GLU GLN GLY PHE SER GLY GLY ALA ASP PRO ALA SEQRES 26 B 438 ASN ARG GLU VAL LEU TRP THR THR ASN TYR ASP THR SER SEQRES 27 B 438 SER ASP LEU TYR GLN PHE ILE LYS THR VAL ASN SER VAL SEQRES 28 B 438 ARG MET LYS SER ASN LYS ALA VAL TYR MET ASP ILE TYR SEQRES 29 B 438 VAL GLY ASP ASN ALA TYR ALA PHE LYS HIS GLY ASP ALA SEQRES 30 B 438 LEU VAL VAL LEU ASN ASN TYR GLY SER GLY SER THR ASN SEQRES 31 B 438 GLN VAL SER PHE SER VAL SER GLY LYS PHE ASP SER GLY SEQRES 32 B 438 ALA SER LEU MET ASP ILE VAL SER ASN ILE THR THR THR SEQRES 33 B 438 VAL SER SER ASP GLY THR VAL THR PHE ASN LEU LYS ASP SEQRES 34 B 438 GLY LEU PRO ALA ILE PHE THR SER ALA HET IAS B 120 8 HET CA A 501 1 HET NAG A 502 14 HET GOL A 503 6 HET SO4 A 504 5 HET GOL A 505 6 HET GOL A 506 6 HET CA B 501 1 HET NAG B 502 14 HET NAG B 503 14 HET GOL B 504 6 HET SO4 B 505 5 HET GOL B 506 6 HET GOL B 507 6 HET SO4 B 508 5 HET GOL B 509 6 HETNAM IAS BETA-L-ASPARTIC ACID HETNAM CA CALCIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN IAS L-ASPARTIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 IAS C4 H7 N O4 FORMUL 3 CA 2(CA 2+) FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 5 GOL 7(C3 H8 O3) FORMUL 6 SO4 3(O4 S 2-) FORMUL 18 HOH *943(H2 O) HELIX 1 AA1 THR A 2 LYS A 7 1 6 HELIX 2 AA2 LEU A 15 GLY A 20 1 6 HELIX 3 AA3 THR A 39 HIS A 46 1 8 HELIX 4 AA4 HIS A 46 GLY A 52 1 7 HELIX 5 AA5 ASP A 88 ARG A 102 1 15 HELIX 6 AA6 ASP A 129 TYR A 133 5 5 HELIX 7 AA7 ASP A 143 CYS A 150 1 8 HELIX 8 AA8 TRP A 151 GLU A 155 5 5 HELIX 9 AA9 ASN A 163 SER A 182 1 20 HELIX 10 AB1 THR A 190 ILE A 194 5 5 HELIX 11 AB2 ARG A 195 LYS A 196 5 2 HELIX 12 AB3 ASP A 197 GLY A 207 1 11 HELIX 13 AB4 ASP A 218 GLY A 223 1 6 HELIX 14 AB5 PRO A 224 TYR A 228 5 5 HELIX 15 AB6 ASN A 234 VAL A 246 1 13 HELIX 16 AB7 PHE A 252 PHE A 266 1 15 HELIX 17 AB8 ASP A 268 VAL A 271 5 4 HELIX 18 AB9 ARG A 283 GLN A 288 1 6 HELIX 19 AC1 ASP A 290 GLY A 304 1 15 HELIX 20 AC2 GLY A 313 GLY A 317 5 5 HELIX 21 AC3 VAL A 329 ASN A 334 5 6 HELIX 22 AC4 SER A 339 SER A 355 1 17 HELIX 23 AC5 THR B 2 LYS B 7 1 6 HELIX 24 AC6 LEU B 15 GLY B 20 1 6 HELIX 25 AC7 THR B 39 LYS B 45 1 7 HELIX 26 AC8 HIS B 46 GLY B 52 1 7 HELIX 27 AC9 ASP B 88 ARG B 102 1 15 HELIX 28 AD1 ASP B 129 TYR B 133 5 5 HELIX 29 AD2 ASP B 143 CYS B 150 1 8 HELIX 30 AD3 TRP B 151 GLU B 155 5 5 HELIX 31 AD4 ASN B 163 SER B 182 1 20 HELIX 32 AD5 THR B 190 ILE B 194 5 5 HELIX 33 AD6 ARG B 195 GLY B 207 1 13 HELIX 34 AD7 ASP B 218 GLY B 223 1 6 HELIX 35 AD8 PRO B 224 TYR B 228 5 5 HELIX 36 AD9 ASN B 234 VAL B 246 1 13 HELIX 37 AE1 PHE B 252 PHE B 266 1 15 HELIX 38 AE2 ASP B 268 VAL B 271 5 4 HELIX 39 AE3 ARG B 283 GLN B 288 1 6 HELIX 40 AE4 ASP B 290 GLY B 304 1 15 HELIX 41 AE5 GLY B 313 GLY B 317 5 5 HELIX 42 AE6 VAL B 329 ASN B 334 5 6 HELIX 43 AE7 SER B 339 MET B 353 1 15 SHEET 1 AA1 8 SER A 231 LEU A 232 0 SHEET 2 AA1 8 PHE A 209 GLY A 212 1 N GLY A 212 O SER A 231 SHEET 3 AA1 8 GLY A 185 ILE A 188 1 N ILE A 186 O PHE A 209 SHEET 4 AA1 8 TYR A 105 VAL A 110 1 N VAL A 110 O ARG A 187 SHEET 5 AA1 8 ALA A 57 ILE A 60 1 N ILE A 58 O MET A 107 SHEET 6 AA1 8 ILE A 11 GLN A 13 1 N TYR A 12 O ALA A 57 SHEET 7 AA1 8 ILE A 307 TYR A 311 1 O PRO A 308 N ILE A 11 SHEET 8 AA1 8 THR A 273 THR A 274 1 N THR A 274 O ILE A 309 SHEET 1 AA2 6 VAL A 359 VAL A 365 0 SHEET 2 AA2 6 ALA A 369 HIS A 374 -1 O LYS A 373 N TYR A 360 SHEET 3 AA2 6 ALA A 377 ASN A 382 -1 O VAL A 379 N PHE A 372 SHEET 4 AA2 6 ALA A 433 SER A 437 -1 O PHE A 435 N LEU A 378 SHEET 5 AA2 6 SER A 405 ASP A 408 -1 N MET A 407 O THR A 436 SHEET 6 AA2 6 THR A 414 THR A 416 -1 O THR A 415 N LEU A 406 SHEET 1 AA3 2 GLN A 391 SER A 395 0 SHEET 2 AA3 2 THR A 422 ASN A 426 -1 O VAL A 423 N PHE A 394 SHEET 1 AA4 8 SER B 231 LEU B 232 0 SHEET 2 AA4 8 PHE B 209 GLY B 212 1 N GLY B 212 O SER B 231 SHEET 3 AA4 8 GLY B 185 ILE B 188 1 N ILE B 186 O PHE B 209 SHEET 4 AA4 8 TYR B 105 VAL B 110 1 N VAL B 110 O ARG B 187 SHEET 5 AA4 8 ALA B 57 ILE B 60 1 N ILE B 58 O MET B 107 SHEET 6 AA4 8 ILE B 11 GLN B 13 1 N TYR B 12 O ALA B 57 SHEET 7 AA4 8 ILE B 307 TYR B 311 1 O PRO B 308 N ILE B 11 SHEET 8 AA4 8 THR B 273 THR B 274 1 N THR B 274 O ILE B 309 SHEET 1 AA5 6 VAL B 359 VAL B 365 0 SHEET 2 AA5 6 ALA B 369 HIS B 374 -1 O ALA B 371 N TYR B 364 SHEET 3 AA5 6 ALA B 377 ASN B 382 -1 O VAL B 379 N PHE B 372 SHEET 4 AA5 6 ALA B 433 SER B 437 -1 O ALA B 433 N VAL B 380 SHEET 5 AA5 6 SER B 405 ASP B 408 -1 N MET B 407 O THR B 436 SHEET 6 AA5 6 THR B 414 THR B 416 -1 O THR B 415 N LEU B 406 SHEET 1 AA6 2 GLN B 391 SER B 395 0 SHEET 2 AA6 2 THR B 422 ASN B 426 -1 O VAL B 423 N PHE B 394 SSBOND 1 CYS A 29 CYS A 36 1555 1555 2.13 SSBOND 2 CYS A 137 CYS A 150 1555 1555 2.09 SSBOND 3 CYS B 29 CYS B 36 1555 1555 2.14 SSBOND 4 CYS B 137 CYS B 150 1555 1555 2.08 LINK ND2 ASN A 180 C1 NAG A 502 1555 1555 1.46 LINK C SER B 119 N IAS B 120 1555 1555 1.33 LINK CG IAS B 120 N GLY B 121 1555 1555 1.43 LINK ND2 ASN B 180 C1 NAG B 502 1555 1555 1.45 LINK ND2 ASN B 412 C1 NAG B 503 1555 1555 1.43 LINK OD1 ASN A 113 CA CA A 501 1555 1555 2.45 LINK O GLU A 148 CA CA A 501 1555 1555 2.36 LINK OD1 ASP A 158 CA CA A 501 1555 1555 2.64 LINK OD2 ASP A 158 CA CA A 501 1555 1555 2.44 LINK O HIS A 193 CA CA A 501 1555 1555 2.41 LINK CA CA A 501 O HOH A 774 1555 1555 2.45 LINK CA CA A 501 O HOH A 776 1555 1555 2.45 LINK CA CA A 501 O HOH A 799 1555 1555 2.48 LINK OD1 ASN B 113 CA CA B 501 1555 1555 2.41 LINK O GLU B 148 CA CA B 501 1555 1555 2.41 LINK OD1 ASP B 158 CA CA B 501 1555 1555 2.61 LINK OD2 ASP B 158 CA CA B 501 1555 1555 2.43 LINK O HIS B 193 CA CA B 501 1555 1555 2.36 LINK CA CA B 501 O HOH B 768 1555 1555 2.50 LINK CA CA B 501 O HOH B 778 1555 1555 2.44 LINK CA CA B 501 O HOH B 791 1555 1555 2.46 CISPEP 1 ASP A 323 PRO A 324 0 6.13 CISPEP 2 ASP B 323 PRO B 324 0 9.80 CRYST1 51.217 62.600 66.807 77.03 81.04 89.62 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019525 -0.000131 -0.003132 0.00000 SCALE2 0.000000 0.015975 -0.003708 0.00000 SCALE3 0.000000 0.000000 0.015557 0.00000