HEADER OXIDOREDUCTASE 24-JUL-19 6SCI TITLE STRUCTURE OF ADHE FORM 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE-ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.1,1.2.1.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: ADHE, ANA, B1241, JW1228; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALDEHYDE ALCOHOL DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.L.LOVERING,E.BRAGGINTON REVDAT 3 24-JAN-24 6SCI 1 REMARK REVDAT 2 17-MAR-21 6SCI 1 COMPND SOURCE JRNL REMARK REVDAT 2 2 1 DBREF SEQADV SEQRES HELIX REVDAT 2 3 1 SHEET LINK SITE ATOM REVDAT 1 26-AUG-20 6SCI 0 JRNL AUTH L.AZMI,E.C.BRAGGINTON,I.T.CADBY,O.BYRON,A.J.ROE, JRNL AUTH 2 A.L.LOVERING,M.GABRIELSEN JRNL TITL HIGH-RESOLUTION STRUCTURE OF THE ALCOHOL DEHYDROGENASE JRNL TITL 2 DOMAIN OF THE BIFUNCTIONAL BACTERIAL ENZYME ADHE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 414 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32880589 JRNL DOI 10.1107/S2053230X20010237 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 62182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 3028 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.2500 - 5.4600 0.98 2853 142 0.1636 0.1951 REMARK 3 2 5.4600 - 4.3400 0.99 2783 136 0.1463 0.1514 REMARK 3 3 4.3400 - 3.7900 0.99 2745 125 0.1479 0.1820 REMARK 3 4 3.7900 - 3.4400 1.00 2717 117 0.1914 0.2250 REMARK 3 5 3.4400 - 3.2000 1.00 2712 144 0.2019 0.2549 REMARK 3 6 3.2000 - 3.0100 1.00 2688 134 0.2095 0.2424 REMARK 3 7 3.0100 - 2.8600 1.00 2684 138 0.1966 0.2034 REMARK 3 8 2.8600 - 2.7300 1.00 2697 129 0.1883 0.2006 REMARK 3 9 2.7300 - 2.6300 1.00 2700 136 0.1888 0.2510 REMARK 3 10 2.6300 - 2.5400 1.00 2641 171 0.1843 0.2109 REMARK 3 11 2.5400 - 2.4600 1.00 2642 147 0.1815 0.2123 REMARK 3 12 2.4600 - 2.3900 1.00 2703 142 0.1750 0.2289 REMARK 3 13 2.3900 - 2.3200 1.00 2639 136 0.1796 0.2005 REMARK 3 14 2.3200 - 2.2700 1.00 2691 127 0.1787 0.2247 REMARK 3 15 2.2700 - 2.2200 0.99 2674 125 0.1940 0.2469 REMARK 3 16 2.2200 - 2.1700 1.00 2670 140 0.1906 0.2390 REMARK 3 17 2.1700 - 2.1300 1.00 2617 165 0.1948 0.2460 REMARK 3 18 2.1200 - 2.0800 1.00 2647 125 0.2009 0.2632 REMARK 3 19 2.0800 - 2.0500 1.00 2661 149 0.2202 0.2646 REMARK 3 20 2.0500 - 2.0100 1.00 2656 141 0.2279 0.2614 REMARK 3 21 2.0100 - 1.9800 1.00 2661 118 0.2381 0.3138 REMARK 3 22 1.9800 - 1.9500 1.00 2673 141 0.2375 0.2570 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.183 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.633 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6359 REMARK 3 ANGLE : 1.031 8626 REMARK 3 CHIRALITY : 0.057 980 REMARK 3 PLANARITY : 0.006 1112 REMARK 3 DIHEDRAL : 8.288 876 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 451:869) REMARK 3 ORIGIN FOR THE GROUP (A): -33.0721 12.4402 -13.2530 REMARK 3 T TENSOR REMARK 3 T11: 0.2484 T22: 0.1232 REMARK 3 T33: 0.1680 T12: -0.0003 REMARK 3 T13: -0.0330 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.9324 L22: 2.3619 REMARK 3 L33: 0.9289 L12: -0.4165 REMARK 3 L13: -0.1258 L23: 0.4296 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: -0.1115 S13: -0.0966 REMARK 3 S21: 0.4871 S22: 0.0776 S23: 0.0076 REMARK 3 S31: 0.2171 S32: 0.0283 S33: -0.0473 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 451:869) REMARK 3 ORIGIN FOR THE GROUP (A): -45.1546 10.6317 -45.1403 REMARK 3 T TENSOR REMARK 3 T11: 0.2318 T22: 0.1389 REMARK 3 T33: 0.1658 T12: 0.0326 REMARK 3 T13: -0.0364 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 1.3754 L22: 2.1604 REMARK 3 L33: 0.8927 L12: 0.0454 REMARK 3 L13: -0.0687 L23: -0.0128 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: 0.1584 S13: 0.1659 REMARK 3 S21: -0.3567 S22: -0.0272 S23: 0.1330 REMARK 3 S31: -0.2019 S32: -0.0665 S33: 0.0116 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 451 THROUGH 533 OR REMARK 3 RESID 535 THROUGH 546 OR RESID 548 REMARK 3 THROUGH 579 OR RESID 582 THROUGH 832 OR REMARK 3 RESID 834 THROUGH 869)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 451 THROUGH 487 OR REMARK 3 (RESID 488 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 489 REMARK 3 THROUGH 533 OR RESID 535 THROUGH 546 OR REMARK 3 RESID 548 THROUGH 577 OR (RESID 578 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 579 THROUGH 832 OR REMARK 3 RESID 834 THROUGH 869)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SCI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97957 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62248 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 76.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6SCR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA HEPES PH 7.0 15% PEG 4000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.51500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.44500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.44500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.51500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 449 REMARK 465 ASP A 450 REMARK 465 ASP A 755 REMARK 465 ASN A 756 REMARK 465 PRO A 757 REMARK 465 THR A 758 REMARK 465 LYS A 759 REMARK 465 GLN A 760 REMARK 465 THR A 761 REMARK 465 ALA A 762 REMARK 465 PHE A 763 REMARK 465 SER A 764 REMARK 465 GLN A 765 REMARK 465 TYR A 766 REMARK 465 ASP A 767 REMARK 465 ARG A 768 REMARK 465 PRO A 769 REMARK 465 GLY A 870 REMARK 465 GLU A 871 REMARK 465 THR A 872 REMARK 465 ALA A 873 REMARK 465 ALA A 874 REMARK 465 LYS A 875 REMARK 465 LYS A 876 REMARK 465 GLU A 877 REMARK 465 ALA A 878 REMARK 465 ALA A 879 REMARK 465 PRO A 880 REMARK 465 ALA A 881 REMARK 465 LYS A 882 REMARK 465 ALA A 883 REMARK 465 GLU A 884 REMARK 465 LYS A 885 REMARK 465 LYS A 886 REMARK 465 ALA A 887 REMARK 465 LYS A 888 REMARK 465 LYS A 889 REMARK 465 SER A 890 REMARK 465 ALA A 891 REMARK 465 PRO A 892 REMARK 465 TRP A 893 REMARK 465 GLY A 894 REMARK 465 ALA A 895 REMARK 465 GLY A 896 REMARK 465 GLY A 897 REMARK 465 LEU A 898 REMARK 465 GLU A 899 REMARK 465 VAL A 900 REMARK 465 LEU A 901 REMARK 465 PHE A 902 REMARK 465 GLN A 903 REMARK 465 MET B 449 REMARK 465 ASP B 450 REMARK 465 ILE B 580 REMARK 465 TYR B 581 REMARK 465 ASP B 755 REMARK 465 ASN B 756 REMARK 465 PRO B 757 REMARK 465 THR B 758 REMARK 465 LYS B 759 REMARK 465 GLN B 760 REMARK 465 THR B 761 REMARK 465 ALA B 762 REMARK 465 PHE B 763 REMARK 465 SER B 764 REMARK 465 GLN B 765 REMARK 465 TYR B 766 REMARK 465 ASP B 767 REMARK 465 ARG B 768 REMARK 465 PRO B 769 REMARK 465 GLY B 870 REMARK 465 GLU B 871 REMARK 465 THR B 872 REMARK 465 ALA B 873 REMARK 465 ALA B 874 REMARK 465 LYS B 875 REMARK 465 LYS B 876 REMARK 465 GLU B 877 REMARK 465 ALA B 878 REMARK 465 ALA B 879 REMARK 465 PRO B 880 REMARK 465 ALA B 881 REMARK 465 LYS B 882 REMARK 465 ALA B 883 REMARK 465 GLU B 884 REMARK 465 LYS B 885 REMARK 465 LYS B 886 REMARK 465 ALA B 887 REMARK 465 LYS B 888 REMARK 465 LYS B 889 REMARK 465 SER B 890 REMARK 465 ALA B 891 REMARK 465 PRO B 892 REMARK 465 TRP B 893 REMARK 465 GLY B 894 REMARK 465 ALA B 895 REMARK 465 GLY B 896 REMARK 465 GLY B 897 REMARK 465 LEU B 898 REMARK 465 GLU B 899 REMARK 465 VAL B 900 REMARK 465 LEU B 901 REMARK 465 PHE B 902 REMARK 465 GLN B 903 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 488 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 578 CG CD CE NZ REMARK 470 ILE A 580 CG1 CG2 CD1 REMARK 470 TYR A 581 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 461 OE1 GLU A 473 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 567 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 GLU B 517 CA - CB - CG ANGL. DEV. = 18.3 DEGREES REMARK 500 GLN B 821 CB - CA - C ANGL. DEV. = 13.7 DEGREES REMARK 500 GLN B 821 N - CA - CB ANGL. DEV. = -11.8 DEGREES REMARK 500 GLN B 821 CA - CB - CG ANGL. DEV. = 25.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 463 158.18 86.23 REMARK 500 GLU A 567 -80.47 -11.79 REMARK 500 PHE A 573 50.10 -115.94 REMARK 500 PHE A 718 -160.92 69.67 REMARK 500 LEU A 719 -132.29 -127.67 REMARK 500 ARG B 463 158.11 87.74 REMARK 500 GLU B 517 -158.51 -106.88 REMARK 500 LYS B 536 63.49 60.24 REMARK 500 PHE B 718 -158.35 68.21 REMARK 500 LEU B 719 -132.29 -128.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN B 821 GLU B 822 -143.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 653 OD1 REMARK 620 2 HIS A 657 NE2 86.5 REMARK 620 3 HIS A 723 NE2 100.1 97.2 REMARK 620 4 HIS A 737 NE2 88.8 172.9 88.9 REMARK 620 5 HOH A1103 O 95.3 89.1 163.7 86.0 REMARK 620 6 HOH A1158 O 170.3 89.4 89.1 94.4 75.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 653 OD1 REMARK 620 2 HIS B 657 NE2 86.4 REMARK 620 3 HIS B 723 NE2 101.2 91.8 REMARK 620 4 HIS B 737 NE2 88.1 174.1 91.2 REMARK 620 5 HOH B1104 O 92.6 92.0 165.9 86.3 REMARK 620 6 HOH B1151 O 172.2 94.8 86.6 90.4 79.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SCG RELATED DB: PDB REMARK 900 FORM 1 DBREF 6SCI A 451 891 UNP P0A9Q7 ADHE_ECOLI 451 891 DBREF 6SCI B 451 891 UNP P0A9Q7 ADHE_ECOLI 451 891 SEQADV 6SCI MET A 449 UNP P0A9Q7 INITIATING METHIONINE SEQADV 6SCI ASP A 450 UNP P0A9Q7 CLONING ARTIFACT SEQADV 6SCI PRO A 892 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI TRP A 893 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY A 894 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI ALA A 895 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY A 896 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY A 897 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI LEU A 898 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLU A 899 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI VAL A 900 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI LEU A 901 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI PHE A 902 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLN A 903 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI MET B 449 UNP P0A9Q7 INITIATING METHIONINE SEQADV 6SCI ASP B 450 UNP P0A9Q7 CLONING ARTIFACT SEQADV 6SCI PRO B 892 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI TRP B 893 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY B 894 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI ALA B 895 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY B 896 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLY B 897 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI LEU B 898 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLU B 899 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI VAL B 900 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI LEU B 901 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI PHE B 902 UNP P0A9Q7 EXPRESSION TAG SEQADV 6SCI GLN B 903 UNP P0A9Q7 EXPRESSION TAG SEQRES 1 A 455 MET ASP MET LEU TRP HIS LYS LEU PRO LYS SER ILE TYR SEQRES 2 A 455 PHE ARG ARG GLY SER LEU PRO ILE ALA LEU ASP GLU VAL SEQRES 3 A 455 ILE THR ASP GLY HIS LYS ARG ALA LEU ILE VAL THR ASP SEQRES 4 A 455 ARG PHE LEU PHE ASN ASN GLY TYR ALA ASP GLN ILE THR SEQRES 5 A 455 SER VAL LEU LYS ALA ALA GLY VAL GLU THR GLU VAL PHE SEQRES 6 A 455 PHE GLU VAL GLU ALA ASP PRO THR LEU SER ILE VAL ARG SEQRES 7 A 455 LYS GLY ALA GLU LEU ALA ASN SER PHE LYS PRO ASP VAL SEQRES 8 A 455 ILE ILE ALA LEU GLY GLY GLY SER PRO MET ASP ALA ALA SEQRES 9 A 455 LYS ILE MET TRP VAL MET TYR GLU HIS PRO GLU THR HIS SEQRES 10 A 455 PHE GLU GLU LEU ALA LEU ARG PHE MET ASP ILE ARG LYS SEQRES 11 A 455 ARG ILE TYR LYS PHE PRO LYS MET GLY VAL LYS ALA LYS SEQRES 12 A 455 MET ILE ALA VAL THR THR THR SER GLY THR GLY SER GLU SEQRES 13 A 455 VAL THR PRO PHE ALA VAL VAL THR ASP ASP ALA THR GLY SEQRES 14 A 455 GLN LYS TYR PRO LEU ALA ASP TYR ALA LEU THR PRO ASP SEQRES 15 A 455 MET ALA ILE VAL ASP ALA ASN LEU VAL MET ASP MET PRO SEQRES 16 A 455 LYS SER LEU CYS ALA PHE GLY GLY LEU ASP ALA VAL THR SEQRES 17 A 455 HIS ALA MET GLU ALA TYR VAL SER VAL LEU ALA SER GLU SEQRES 18 A 455 PHE SER ASP GLY GLN ALA LEU GLN ALA LEU LYS LEU LEU SEQRES 19 A 455 LYS GLU TYR LEU PRO ALA SER TYR HIS GLU GLY SER LYS SEQRES 20 A 455 ASN PRO VAL ALA ARG GLU ARG VAL HIS SER ALA ALA THR SEQRES 21 A 455 ILE ALA GLY ILE ALA PHE ALA ASN ALA PHE LEU GLY VAL SEQRES 22 A 455 CYS HIS SER MET ALA HIS LYS LEU GLY SER GLN PHE HIS SEQRES 23 A 455 ILE PRO HIS GLY LEU ALA ASN ALA LEU LEU ILE CYS ASN SEQRES 24 A 455 VAL ILE ARG TYR ASN ALA ASN ASP ASN PRO THR LYS GLN SEQRES 25 A 455 THR ALA PHE SER GLN TYR ASP ARG PRO GLN ALA ARG ARG SEQRES 26 A 455 ARG TYR ALA GLU ILE ALA ASP HIS LEU GLY LEU SER ALA SEQRES 27 A 455 PRO GLY ASP ARG THR ALA ALA LYS ILE GLU LYS LEU LEU SEQRES 28 A 455 ALA TRP LEU GLU THR LEU LYS ALA GLU LEU GLY ILE PRO SEQRES 29 A 455 LYS SER ILE ARG GLU ALA GLY VAL GLN GLU ALA ASP PHE SEQRES 30 A 455 LEU ALA ASN VAL ASP LYS LEU SER GLU ASP ALA PHE ASP SEQRES 31 A 455 ASP GLN CYS THR GLY ALA ASN PRO ARG TYR PRO LEU ILE SEQRES 32 A 455 SER GLU LEU LYS GLN ILE LEU LEU ASP THR TYR TYR GLY SEQRES 33 A 455 ARG ASP TYR VAL GLU GLY GLU THR ALA ALA LYS LYS GLU SEQRES 34 A 455 ALA ALA PRO ALA LYS ALA GLU LYS LYS ALA LYS LYS SER SEQRES 35 A 455 ALA PRO TRP GLY ALA GLY GLY LEU GLU VAL LEU PHE GLN SEQRES 1 B 455 MET ASP MET LEU TRP HIS LYS LEU PRO LYS SER ILE TYR SEQRES 2 B 455 PHE ARG ARG GLY SER LEU PRO ILE ALA LEU ASP GLU VAL SEQRES 3 B 455 ILE THR ASP GLY HIS LYS ARG ALA LEU ILE VAL THR ASP SEQRES 4 B 455 ARG PHE LEU PHE ASN ASN GLY TYR ALA ASP GLN ILE THR SEQRES 5 B 455 SER VAL LEU LYS ALA ALA GLY VAL GLU THR GLU VAL PHE SEQRES 6 B 455 PHE GLU VAL GLU ALA ASP PRO THR LEU SER ILE VAL ARG SEQRES 7 B 455 LYS GLY ALA GLU LEU ALA ASN SER PHE LYS PRO ASP VAL SEQRES 8 B 455 ILE ILE ALA LEU GLY GLY GLY SER PRO MET ASP ALA ALA SEQRES 9 B 455 LYS ILE MET TRP VAL MET TYR GLU HIS PRO GLU THR HIS SEQRES 10 B 455 PHE GLU GLU LEU ALA LEU ARG PHE MET ASP ILE ARG LYS SEQRES 11 B 455 ARG ILE TYR LYS PHE PRO LYS MET GLY VAL LYS ALA LYS SEQRES 12 B 455 MET ILE ALA VAL THR THR THR SER GLY THR GLY SER GLU SEQRES 13 B 455 VAL THR PRO PHE ALA VAL VAL THR ASP ASP ALA THR GLY SEQRES 14 B 455 GLN LYS TYR PRO LEU ALA ASP TYR ALA LEU THR PRO ASP SEQRES 15 B 455 MET ALA ILE VAL ASP ALA ASN LEU VAL MET ASP MET PRO SEQRES 16 B 455 LYS SER LEU CYS ALA PHE GLY GLY LEU ASP ALA VAL THR SEQRES 17 B 455 HIS ALA MET GLU ALA TYR VAL SER VAL LEU ALA SER GLU SEQRES 18 B 455 PHE SER ASP GLY GLN ALA LEU GLN ALA LEU LYS LEU LEU SEQRES 19 B 455 LYS GLU TYR LEU PRO ALA SER TYR HIS GLU GLY SER LYS SEQRES 20 B 455 ASN PRO VAL ALA ARG GLU ARG VAL HIS SER ALA ALA THR SEQRES 21 B 455 ILE ALA GLY ILE ALA PHE ALA ASN ALA PHE LEU GLY VAL SEQRES 22 B 455 CYS HIS SER MET ALA HIS LYS LEU GLY SER GLN PHE HIS SEQRES 23 B 455 ILE PRO HIS GLY LEU ALA ASN ALA LEU LEU ILE CYS ASN SEQRES 24 B 455 VAL ILE ARG TYR ASN ALA ASN ASP ASN PRO THR LYS GLN SEQRES 25 B 455 THR ALA PHE SER GLN TYR ASP ARG PRO GLN ALA ARG ARG SEQRES 26 B 455 ARG TYR ALA GLU ILE ALA ASP HIS LEU GLY LEU SER ALA SEQRES 27 B 455 PRO GLY ASP ARG THR ALA ALA LYS ILE GLU LYS LEU LEU SEQRES 28 B 455 ALA TRP LEU GLU THR LEU LYS ALA GLU LEU GLY ILE PRO SEQRES 29 B 455 LYS SER ILE ARG GLU ALA GLY VAL GLN GLU ALA ASP PHE SEQRES 30 B 455 LEU ALA ASN VAL ASP LYS LEU SER GLU ASP ALA PHE ASP SEQRES 31 B 455 ASP GLN CYS THR GLY ALA ASN PRO ARG TYR PRO LEU ILE SEQRES 32 B 455 SER GLU LEU LYS GLN ILE LEU LEU ASP THR TYR TYR GLY SEQRES 33 B 455 ARG ASP TYR VAL GLU GLY GLU THR ALA ALA LYS LYS GLU SEQRES 34 B 455 ALA ALA PRO ALA LYS ALA GLU LYS LYS ALA LYS LYS SER SEQRES 35 B 455 ALA PRO TRP GLY ALA GLY GLY LEU GLU VAL LEU PHE GLN HET FE A1001 1 HET FE B1001 1 HETNAM FE FE (III) ION FORMUL 3 FE 2(FE 3+) FORMUL 5 HOH *125(H2 O) HELIX 1 AA1 GLY A 465 ASP A 477 1 13 HELIX 2 AA2 ARG A 488 ASN A 493 1 6 HELIX 3 AA3 ALA A 496 ALA A 506 1 11 HELIX 4 AA4 THR A 521 LYS A 536 1 16 HELIX 5 AA5 GLY A 545 HIS A 561 1 17 HELIX 6 AA6 HIS A 565 PHE A 573 1 9 HELIX 7 AA7 GLY A 602 THR A 606 5 5 HELIX 8 AA8 TYR A 625 THR A 628 5 4 HELIX 9 AA9 ASP A 635 VAL A 639 5 5 HELIX 10 AB1 PRO A 643 SER A 664 1 22 HELIX 11 AB2 SER A 668 GLY A 693 1 26 HELIX 12 AB3 ASN A 696 PHE A 718 1 23 HELIX 13 AB4 GLY A 720 HIS A 734 1 15 HELIX 14 AB5 PRO A 736 ALA A 753 1 18 HELIX 15 AB6 ALA A 771 LEU A 782 1 12 HELIX 16 AB7 ARG A 790 LEU A 809 1 20 HELIX 17 AB8 ILE A 815 GLY A 819 5 5 HELIX 18 AB9 GLN A 821 ASP A 839 1 19 HELIX 19 AC1 GLN A 840 ASN A 845 5 6 HELIX 20 AC2 LEU A 850 GLY A 864 1 15 HELIX 21 AC3 GLY B 465 ASP B 477 1 13 HELIX 22 AC4 ASP B 487 ASN B 493 1 7 HELIX 23 AC5 GLY B 494 ALA B 506 1 13 HELIX 24 AC6 THR B 521 LYS B 536 1 16 HELIX 25 AC7 GLY B 545 HIS B 561 1 17 HELIX 26 AC8 HIS B 565 PHE B 573 1 9 HELIX 27 AC9 GLY B 602 THR B 606 5 5 HELIX 28 AD1 TYR B 625 THR B 628 5 4 HELIX 29 AD2 ASP B 635 VAL B 639 5 5 HELIX 30 AD3 PRO B 643 SER B 664 1 22 HELIX 31 AD4 SER B 671 GLY B 693 1 23 HELIX 32 AD5 ASN B 696 PHE B 718 1 23 HELIX 33 AD6 GLY B 720 HIS B 734 1 15 HELIX 34 AD7 PRO B 736 ALA B 753 1 18 HELIX 35 AD8 ALA B 771 LEU B 782 1 12 HELIX 36 AD9 ARG B 790 LEU B 809 1 20 HELIX 37 AE1 ILE B 815 GLY B 819 5 5 HELIX 38 AE2 GLN B 821 ASP B 839 1 19 HELIX 39 AE3 GLN B 840 ASN B 845 5 6 HELIX 40 AE4 LEU B 850 GLY B 864 1 15 SHEET 1 AA1 7 LEU A 452 LYS A 455 0 SHEET 2 AA1 7 SER B 459 PHE B 462 -1 O PHE B 462 N LEU A 452 SHEET 3 AA1 7 MET B 631 VAL B 634 1 O ALA B 632 N TYR B 461 SHEET 4 AA1 7 LYS B 591 THR B 596 1 N ALA B 594 O ILE B 633 SHEET 5 AA1 7 VAL B 539 GLY B 544 1 N ALA B 542 O VAL B 595 SHEET 6 AA1 7 ARG B 481 VAL B 485 1 N LEU B 483 O ILE B 541 SHEET 7 AA1 7 GLU B 509 PHE B 513 1 O GLU B 509 N ALA B 482 SHEET 1 AA2 7 GLU A 509 VAL A 516 0 SHEET 2 AA2 7 ARG A 481 ASP A 487 1 N ILE A 484 O PHE A 513 SHEET 3 AA2 7 VAL A 539 GLY A 544 1 O ILE A 541 N LEU A 483 SHEET 4 AA2 7 LYS A 591 THR A 596 1 O VAL A 595 N ALA A 542 SHEET 5 AA2 7 MET A 631 VAL A 634 1 O ILE A 633 N ALA A 594 SHEET 6 AA2 7 SER A 459 PHE A 462 1 N TYR A 461 O VAL A 634 SHEET 7 AA2 7 LEU B 452 LYS B 455 -1 O HIS B 454 N ILE A 460 SHEET 1 AA3 2 PHE A 608 THR A 612 0 SHEET 2 AA3 2 LYS A 619 ALA A 623 -1 O LEU A 622 N ALA A 609 SHEET 1 AA4 2 PHE B 608 THR B 612 0 SHEET 2 AA4 2 LYS B 619 ALA B 623 -1 O LEU B 622 N ALA B 609 LINK OD1 ASP A 653 FE FE A1001 1555 1555 2.23 LINK NE2 HIS A 657 FE FE A1001 1555 1555 2.13 LINK NE2 HIS A 723 FE FE A1001 1555 1555 2.15 LINK NE2 HIS A 737 FE FE A1001 1555 1555 2.17 LINK FE FE A1001 O HOH A1103 1555 1555 2.29 LINK FE FE A1001 O HOH A1158 1555 1555 2.17 LINK OD1 ASP B 653 FE FE B1001 1555 1555 2.27 LINK NE2 HIS B 657 FE FE B1001 1555 1555 2.04 LINK NE2 HIS B 723 FE FE B1001 1555 1555 2.16 LINK NE2 HIS B 737 FE FE B1001 1555 1555 2.15 LINK FE FE B1001 O HOH B1104 1555 1555 2.18 LINK FE FE B1001 O HOH B1151 1555 1555 2.25 CISPEP 1 SER A 599 GLY A 600 0 2.07 CISPEP 2 SER B 599 GLY B 600 0 1.13 SITE 1 AC1 6 ASP A 653 HIS A 657 HIS A 723 HIS A 737 SITE 2 AC1 6 HOH A1103 HOH A1158 SITE 1 AC2 6 ASP B 653 HIS B 657 HIS B 723 HIS B 737 SITE 2 AC2 6 HOH B1104 HOH B1151 CRYST1 71.030 96.730 122.890 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008137 0.00000