HEADER NUCLEAR PROTEIN 30-JUL-19 6SEG TITLE CLASS1: CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3-LIKE CENTROMERIC PROTEIN A; COMPND 3 CHAIN: A, E; COMPND 4 SYNONYM: CENTROMERE AUTOANTIGEN A,CENTROMERE PROTEIN A,CENP-A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H4; COMPND 8 CHAIN: B, F; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: HISTONE H2A TYPE 2-A; COMPND 12 CHAIN: C, G; COMPND 13 SYNONYM: HISTONE H2A.2,HISTONE H2A/O; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: HISTONE H2B TYPE 1-C/E/F/G/I; COMPND 17 CHAIN: D, H; COMPND 18 SYNONYM: HISTONE H2B.1 A,HISTONE H2B.A,H2B/A,HISTONE H2B.G,H2B/G, COMPND 19 HISTONE H2B.H,H2B/H,HISTONE H2B.K,H2B/K,HISTONE H2B.L,H2B/L; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: DNA (145-MER); COMPND 23 CHAIN: I; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 6; COMPND 26 MOLECULE: DNA (145-MER); COMPND 27 CHAIN: J; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CENPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, SOURCE 13 H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, SOURCE 14 H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, SOURCE 15 H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, SOURCE 16 H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 GENE: HIST2H2AA3, H2AFO, HIST2H2AA, HIST2H2AA4; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 MOL_ID: 4; SOURCE 27 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 28 ORGANISM_COMMON: HUMAN; SOURCE 29 ORGANISM_TAXID: 9606; SOURCE 30 GENE: HIST1H2BC, H2BFL, HIST1H2BE, H2BFH, HIST1H2BF, H2BFG, SOURCE 31 HIST1H2BG, H2BFA, HIST1H2BI, H2BFK; SOURCE 32 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 33 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 34 MOL_ID: 5; SOURCE 35 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 36 ORGANISM_TAXID: 32630; SOURCE 37 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 38 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 39 MOL_ID: 6; SOURCE 40 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 41 ORGANISM_TAXID: 32630; SOURCE 42 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 43 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CENP-A, NUCLEOSOME, CENTROMERE, CENTROMERIC CHROMATIN, NUCLEAR KEYWDS 2 PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.ALI-AHMAD,S.BILOKAPIC,I.B.SCHAFER,M.HALIC,N.SEKULIC REVDAT 5 06-NOV-19 6SEG 1 REMARK REVDAT 4 23-OCT-19 6SEG 1 REMARK REVDAT 3 16-OCT-19 6SEG 1 JRNL REVDAT 2 11-SEP-19 6SEG 1 JRNL REVDAT 1 14-AUG-19 6SEG 0 JRNL AUTH A.ALI-AHMAD,S.BILOKAPIC,I.B.SCHAFER,M.HALIC,N.SEKULIC JRNL TITL CENP-C UNWRAPS THE HUMAN CENP-A NUCLEOSOME THROUGH THE H2A JRNL TITL 2 C-TERMINAL TAIL. JRNL REF EMBO REP. V. 20 48913 2019 JRNL REFN ESSN 1469-3178 JRNL PMID 31475439 JRNL DOI 10.15252/EMBR.201948913 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 320000 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6SEG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103571. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CENP-A NUCLEOSOME; CLASS1 : REMARK 245 CENP-A NUCLEOSOME IN COMPLEX REMARK 245 WITH CENP-C CENTRAL REGION; DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 53300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -379.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 PRO A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 ARG A 6 REMARK 465 SER A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 PRO A 10 REMARK 465 GLU A 11 REMARK 465 ALA A 12 REMARK 465 PRO A 13 REMARK 465 ARG A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 SER A 17 REMARK 465 PRO A 18 REMARK 465 SER A 19 REMARK 465 PRO A 20 REMARK 465 THR A 21 REMARK 465 PRO A 22 REMARK 465 THR A 23 REMARK 465 PRO A 24 REMARK 465 GLY A 25 REMARK 465 PRO A 26 REMARK 465 SER A 27 REMARK 465 ARG A 28 REMARK 465 ARG A 29 REMARK 465 GLY A 30 REMARK 465 PRO A 31 REMARK 465 SER A 32 REMARK 465 LEU A 33 REMARK 465 GLY A 34 REMARK 465 ALA A 35 REMARK 465 SER A 36 REMARK 465 SER A 37 REMARK 465 HIS A 38 REMARK 465 GLN A 39 REMARK 465 HIS A 40 REMARK 465 SER A 41 REMARK 465 ARG A 42 REMARK 465 ARG A 43 REMARK 465 ARG A 44 REMARK 465 GLY A 140 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 16 REMARK 465 ARG B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ARG B 23 REMARK 465 ASP B 24 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 ALA C 10 REMARK 465 ARG C 11 REMARK 465 ALA C 12 REMARK 465 LYS C 13 REMARK 465 ALA C 14 REMARK 465 LYS C 15 REMARK 465 GLN C 112 REMARK 465 ALA C 113 REMARK 465 VAL C 114 REMARK 465 LEU C 115 REMARK 465 LEU C 116 REMARK 465 PRO C 117 REMARK 465 LYS C 118 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 LYS C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 GLY C 128 REMARK 465 LYS C 129 REMARK 465 MET D 0 REMARK 465 PRO D 1 REMARK 465 GLU D 2 REMARK 465 PRO D 3 REMARK 465 ALA D 4 REMARK 465 LYS D 5 REMARK 465 SER D 6 REMARK 465 ALA D 7 REMARK 465 PRO D 8 REMARK 465 ALA D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 LYS D 12 REMARK 465 GLY D 13 REMARK 465 SER D 14 REMARK 465 LYS D 15 REMARK 465 LYS D 16 REMARK 465 ALA D 17 REMARK 465 VAL D 18 REMARK 465 THR D 19 REMARK 465 LYS D 20 REMARK 465 ALA D 21 REMARK 465 GLN D 22 REMARK 465 LYS D 23 REMARK 465 LYS D 24 REMARK 465 ASP D 25 REMARK 465 GLY D 26 REMARK 465 LYS D 27 REMARK 465 LYS D 28 REMARK 465 ARG D 29 REMARK 465 LYS D 30 REMARK 465 ARG D 31 REMARK 465 SER D 32 REMARK 465 LYS D 125 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 465 PRO E 3 REMARK 465 ARG E 4 REMARK 465 ARG E 5 REMARK 465 ARG E 6 REMARK 465 SER E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 PRO E 10 REMARK 465 GLU E 11 REMARK 465 ALA E 12 REMARK 465 PRO E 13 REMARK 465 ARG E 14 REMARK 465 ARG E 15 REMARK 465 ARG E 16 REMARK 465 SER E 17 REMARK 465 PRO E 18 REMARK 465 SER E 19 REMARK 465 PRO E 20 REMARK 465 THR E 21 REMARK 465 PRO E 22 REMARK 465 THR E 23 REMARK 465 PRO E 24 REMARK 465 GLY E 25 REMARK 465 PRO E 26 REMARK 465 SER E 27 REMARK 465 ARG E 28 REMARK 465 ARG E 29 REMARK 465 GLY E 30 REMARK 465 PRO E 31 REMARK 465 SER E 32 REMARK 465 LEU E 33 REMARK 465 GLY E 34 REMARK 465 ALA E 35 REMARK 465 SER E 36 REMARK 465 SER E 37 REMARK 465 HIS E 38 REMARK 465 GLN E 39 REMARK 465 HIS E 40 REMARK 465 SER E 41 REMARK 465 ARG E 42 REMARK 465 ARG E 43 REMARK 465 ARG E 44 REMARK 465 GLY E 140 REMARK 465 MET F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 ARG F 19 REMARK 465 LYS F 20 REMARK 465 VAL F 21 REMARK 465 LEU F 22 REMARK 465 ARG F 23 REMARK 465 ASP F 24 REMARK 465 MET G 0 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 ALA G 10 REMARK 465 LEU G 115 REMARK 465 LEU G 116 REMARK 465 PRO G 117 REMARK 465 LYS G 118 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 HIS G 123 REMARK 465 HIS G 124 REMARK 465 LYS G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 GLY G 128 REMARK 465 LYS G 129 REMARK 465 MET H 0 REMARK 465 PRO H 1 REMARK 465 GLU H 2 REMARK 465 PRO H 3 REMARK 465 ALA H 4 REMARK 465 LYS H 5 REMARK 465 SER H 6 REMARK 465 ALA H 7 REMARK 465 PRO H 8 REMARK 465 ALA H 9 REMARK 465 PRO H 10 REMARK 465 LYS H 11 REMARK 465 LYS H 12 REMARK 465 GLY H 13 REMARK 465 SER H 14 REMARK 465 LYS H 15 REMARK 465 LYS H 16 REMARK 465 ALA H 17 REMARK 465 VAL H 18 REMARK 465 THR H 19 REMARK 465 LYS H 20 REMARK 465 ALA H 21 REMARK 465 GLN H 22 REMARK 465 LYS H 23 REMARK 465 LYS H 24 REMARK 465 ASP H 25 REMARK 465 GLY H 26 REMARK 465 LYS H 27 REMARK 465 LYS H 28 REMARK 465 ARG H 29 REMARK 465 LYS H 30 REMARK 465 ARG H 31 REMARK 465 SER H 32 REMARK 465 ARG H 33 REMARK 465 LYS H 34 REMARK 465 LYS H 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 121 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 DG I -68 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT I 62 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA J -72 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT J -71 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DT J -61 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J -25 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT J -16 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG J 4 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J 23 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC J 68 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT J 69 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR C 76 31.60 -99.83 REMARK 500 LYS G 99 30.09 -92.12 REMARK 500 TYR H 37 30.83 -99.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10155 RELATED DB: EMDB REMARK 900 CLASS1: CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION DBREF 6SEG A 1 140 UNP P49450 CENPA_HUMAN 1 140 DBREF 6SEG B 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 6SEG C 0 129 UNP Q6FI13 H2A2A_HUMAN 1 130 DBREF 6SEG D 0 125 UNP P62807 H2B1C_HUMAN 1 126 DBREF 6SEG E 1 140 UNP P49450 CENPA_HUMAN 1 140 DBREF 6SEG F 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 6SEG G 0 129 UNP Q6FI13 H2A2A_HUMAN 1 130 DBREF 6SEG H 0 125 UNP P62807 H2B1C_HUMAN 1 126 DBREF 6SEG I -72 72 PDB 6SEG 6SEG -72 72 DBREF 6SEG J -72 72 PDB 6SEG 6SEG -72 72 SEQRES 1 A 140 MET GLY PRO ARG ARG ARG SER ARG LYS PRO GLU ALA PRO SEQRES 2 A 140 ARG ARG ARG SER PRO SER PRO THR PRO THR PRO GLY PRO SEQRES 3 A 140 SER ARG ARG GLY PRO SER LEU GLY ALA SER SER HIS GLN SEQRES 4 A 140 HIS SER ARG ARG ARG GLN GLY TRP LEU LYS GLU ILE ARG SEQRES 5 A 140 LYS LEU GLN LYS SER THR HIS LEU LEU ILE ARG LYS LEU SEQRES 6 A 140 PRO PHE SER ARG LEU ALA ARG GLU ILE CYS VAL LYS PHE SEQRES 7 A 140 THR ARG GLY VAL ASP PHE ASN TRP GLN ALA GLN ALA LEU SEQRES 8 A 140 LEU ALA LEU GLN GLU ALA ALA GLU ALA PHE LEU VAL HIS SEQRES 9 A 140 LEU PHE GLU ASP ALA TYR LEU LEU THR LEU HIS ALA GLY SEQRES 10 A 140 ARG VAL THR LEU PHE PRO LYS ASP VAL GLN LEU ALA ARG SEQRES 11 A 140 ARG ILE ARG GLY LEU GLU GLU GLY LEU GLY SEQRES 1 B 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 B 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 B 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 B 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 B 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 B 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 B 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 B 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 C 130 MET SER GLY ARG GLY LYS GLN GLY GLY LYS ALA ARG ALA SEQRES 2 C 130 LYS ALA LYS SER ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 3 C 130 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 4 C 130 TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR MET SEQRES 5 C 130 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 6 C 130 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 7 C 130 ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP SEQRES 8 C 130 GLU GLU LEU ASN LYS LEU LEU GLY LYS VAL THR ILE ALA SEQRES 9 C 130 GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU SEQRES 10 C 130 PRO LYS LYS THR GLU SER HIS HIS LYS ALA LYS GLY LYS SEQRES 1 D 126 MET PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS SEQRES 2 D 126 GLY SER LYS LYS ALA VAL THR LYS ALA GLN LYS LYS ASP SEQRES 3 D 126 GLY LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER SEQRES 4 D 126 VAL TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP SEQRES 5 D 126 THR GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER SEQRES 6 D 126 PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SEQRES 7 D 126 SER ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SEQRES 8 D 126 SER ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO SEQRES 9 D 126 GLY GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS SEQRES 10 D 126 ALA VAL THR LYS TYR THR SER SER LYS SEQRES 1 E 140 MET GLY PRO ARG ARG ARG SER ARG LYS PRO GLU ALA PRO SEQRES 2 E 140 ARG ARG ARG SER PRO SER PRO THR PRO THR PRO GLY PRO SEQRES 3 E 140 SER ARG ARG GLY PRO SER LEU GLY ALA SER SER HIS GLN SEQRES 4 E 140 HIS SER ARG ARG ARG GLN GLY TRP LEU LYS GLU ILE ARG SEQRES 5 E 140 LYS LEU GLN LYS SER THR HIS LEU LEU ILE ARG LYS LEU SEQRES 6 E 140 PRO PHE SER ARG LEU ALA ARG GLU ILE CYS VAL LYS PHE SEQRES 7 E 140 THR ARG GLY VAL ASP PHE ASN TRP GLN ALA GLN ALA LEU SEQRES 8 E 140 LEU ALA LEU GLN GLU ALA ALA GLU ALA PHE LEU VAL HIS SEQRES 9 E 140 LEU PHE GLU ASP ALA TYR LEU LEU THR LEU HIS ALA GLY SEQRES 10 E 140 ARG VAL THR LEU PHE PRO LYS ASP VAL GLN LEU ALA ARG SEQRES 11 E 140 ARG ILE ARG GLY LEU GLU GLU GLY LEU GLY SEQRES 1 F 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 F 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 F 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 F 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 F 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 F 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 F 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 F 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 130 MET SER GLY ARG GLY LYS GLN GLY GLY LYS ALA ARG ALA SEQRES 2 G 130 LYS ALA LYS SER ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 3 G 130 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 4 G 130 TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR MET SEQRES 5 G 130 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 6 G 130 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 7 G 130 ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP SEQRES 8 G 130 GLU GLU LEU ASN LYS LEU LEU GLY LYS VAL THR ILE ALA SEQRES 9 G 130 GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU SEQRES 10 G 130 PRO LYS LYS THR GLU SER HIS HIS LYS ALA LYS GLY LYS SEQRES 1 H 126 MET PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS SEQRES 2 H 126 GLY SER LYS LYS ALA VAL THR LYS ALA GLN LYS LYS ASP SEQRES 3 H 126 GLY LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER SEQRES 4 H 126 VAL TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP SEQRES 5 H 126 THR GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER SEQRES 6 H 126 PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SEQRES 7 H 126 SER ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SEQRES 8 H 126 SER ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO SEQRES 9 H 126 GLY GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS SEQRES 10 H 126 ALA VAL THR LYS TYR THR SER SER LYS SEQRES 1 I 145 DA DT DC DA DG DA DA DT DC DC DC DG DG SEQRES 2 I 145 DT DG DC DC DG DA DG DG DC DC DG DC DT SEQRES 3 I 145 DC DA DA DT DT DG DG DT DC DG DT DA DG SEQRES 4 I 145 DA DC DA DG DC DT DC DT DA DG DC DA DC SEQRES 5 I 145 DC DG DC DT DT DA DA DA DC DG DC DA DC SEQRES 6 I 145 DG DT DA DC DG DC DG DC DT DG DT DC DC SEQRES 7 I 145 DC DC DC DG DC DG DT DT DT DT DA DA DC SEQRES 8 I 145 DC DG DC DC DA DA DG DG DG DG DA DT DT SEQRES 9 I 145 DA DC DT DC DC DC DT DA DG DT DC DT DC SEQRES 10 I 145 DC DA DG DG DC DA DC DG DT DG DT DC DA SEQRES 11 I 145 DG DA DT DA DT DA DT DA DC DA DT DC DG SEQRES 12 I 145 DA DT SEQRES 1 J 145 DA DT DC DG DA DT DG DT DA DT DA DT DA SEQRES 2 J 145 DT DC DT DG DA DC DA DC DG DT DG DC DC SEQRES 3 J 145 DT DG DG DA DG DA DC DT DA DG DG DG DA SEQRES 4 J 145 DG DT DA DA DT DC DC DC DC DT DT DG DG SEQRES 5 J 145 DC DG DG DT DT DA DA DA DA DC DG DC DG SEQRES 6 J 145 DG DG DG DG DA DC DA DG DC DG DC DG DT SEQRES 7 J 145 DA DC DG DT DG DC DG DT DT DT DA DA DG SEQRES 8 J 145 DC DG DG DT DG DC DT DA DG DA DG DC DT SEQRES 9 J 145 DG DT DC DT DA DC DG DA DC DC DA DA DT SEQRES 10 J 145 DT DG DA DG DC DG DG DC DC DT DC DG DG SEQRES 11 J 145 DC DA DC DC DG DG DG DA DT DT DC DT DG SEQRES 12 J 145 DA DT HELIX 1 AA1 GLN A 45 GLN A 55 1 11 HELIX 2 AA2 ARG A 63 THR A 79 1 17 HELIX 3 AA3 GLN A 87 ALA A 116 1 30 HELIX 4 AA4 PHE A 122 ARG A 133 1 12 HELIX 5 AA5 ASN B 25 ILE B 29 5 5 HELIX 6 AA6 THR B 30 GLY B 41 1 12 HELIX 7 AA7 ILE B 50 ALA B 76 1 27 HELIX 8 AA8 THR B 82 GLY B 94 1 13 HELIX 9 AA9 ARG C 17 ALA C 21 1 5 HELIX 10 AB1 VAL C 27 LYS C 36 1 10 HELIX 11 AB2 ALA C 45 ASN C 73 1 29 HELIX 12 AB3 ILE C 79 ASP C 90 1 12 HELIX 13 AB4 GLU C 92 LEU C 97 1 6 HELIX 14 AB5 TYR D 37 HIS D 49 1 13 HELIX 15 AB6 SER D 56 ASN D 84 1 29 HELIX 16 AB7 THR D 90 LEU D 102 1 13 HELIX 17 AB8 PRO D 103 SER D 123 1 21 HELIX 18 AB9 GLY E 46 SER E 57 1 12 HELIX 19 AC1 ARG E 63 THR E 79 1 17 HELIX 20 AC2 GLN E 87 ALA E 116 1 30 HELIX 21 AC3 PHE E 122 GLY E 134 1 13 HELIX 22 AC4 ASN F 25 ILE F 29 5 5 HELIX 23 AC5 THR F 30 GLY F 41 1 12 HELIX 24 AC6 ILE F 50 ALA F 76 1 27 HELIX 25 AC7 THR F 82 GLN F 93 1 12 HELIX 26 AC8 SER G 16 ALA G 21 1 6 HELIX 27 AC9 PRO G 26 LYS G 36 1 11 HELIX 28 AD1 ALA G 45 ASN G 73 1 29 HELIX 29 AD2 ILE G 79 ARG G 88 1 10 HELIX 30 AD3 ASP G 90 LEU G 97 1 8 HELIX 31 AD4 TYR H 37 HIS H 49 1 13 HELIX 32 AD5 SER H 55 ASN H 84 1 30 HELIX 33 AD6 THR H 90 LEU H 102 1 13 HELIX 34 AD7 GLU H 105 THR H 122 1 18 SHEET 1 AA1 2 ASN A 85 TRP A 86 0 SHEET 2 AA1 2 THR B 80 VAL B 81 1 O VAL B 81 N ASN A 85 SHEET 1 AA2 2 THR A 120 LEU A 121 0 SHEET 2 AA2 2 ARG B 45 ILE B 46 1 O ARG B 45 N LEU A 121 SHEET 1 AA3 2 THR B 96 TYR B 98 0 SHEET 2 AA3 2 VAL G 100 ILE G 102 1 O THR G 101 N THR B 96 SHEET 1 AA4 2 ARG C 42 VAL C 43 0 SHEET 2 AA4 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA5 2 VAL C 100 ILE C 102 0 SHEET 2 AA5 2 THR F 96 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 AA6 2 ASN E 85 TRP E 86 0 SHEET 2 AA6 2 THR F 80 VAL F 81 1 O VAL F 81 N ASN E 85 SHEET 1 AA7 2 THR E 120 LEU E 121 0 SHEET 2 AA7 2 ARG F 45 ILE F 46 1 O ARG F 45 N LEU E 121 SHEET 1 AA8 2 ARG G 42 VAL G 43 0 SHEET 2 AA8 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000